Mercurial > repos > galaxyp > proteomiqon_peptidedb

comparison test-data/result_2.json @ 0:1e5400393797 draft default tip

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
author galaxyp
date Sun, 04 Jul 2021 21:26:08 +0000
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-1:000000000000 0:1e5400393797
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3 {
4 "Name": "galaxy",
5 "ParseProteinIDRegexPattern": "id",
6 "Protease": { "Case": "Trypsin" },
7 "MinMissedCleavages": 0,
8 "MaxMissedCleavages": 2,
9 "MaxMass": 15000.0,
10 "MinPepLength": 4,
11 "MaxPepLength": 65,
12 "IsotopicMod": [
13 {"Case":"N15"}
14 ],
15 "MassMode": {
16 "Case": "Monoisotopic"
17 },
18 "FixedMods": [
19 {"Case":"Acetylation'ProtNTerm'"},
20 {"Case":"Carbamidomethyl'Cys'"},
21 {"Case":"Oxidation'Met'"},
22 {"Case":"Phosphorylation'Ser'Thr'Tyr'"},
23 {"Case":"Pyro_Glu'GluNterm'"},
24 {"Case":"Pyro_Glu'GlnNterm'"}
25 ],
26 "VariableMods": [
27 {"Case":"Acetylation'ProtNTerm'"},
28 {"Case":"Carbamidomethyl'Cys'"},
29 {"Case":"Oxidation'Met'"},
30 {"Case":"Phosphorylation'Ser'Thr'Tyr'"},
31 {"Case":"Pyro_Glu'GluNterm'"},
32 {"Case":"Pyro_Glu'GlnNterm'"}
33 ],
34 "VarModThreshold": 4
35 }
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