Mercurial > repos > geert-vandeweyer > bamtools_wrappers

comparison SplitOnRg.xml @ 2:2572b6f85654 draft default tip

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added samtools requirement to splitonrg
author geert-vandeweyer
date Mon, 12 May 2014 02:06:26 -0400
parents 76aff7bca1b2
children
comparison
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1:76aff7bca1b2 2:2572b6f85654
1 <tool id="bamtools_SplitOnRG" name="Split BAM on ReadGroups" force_history_refresh="True"> 1 <tool id="bamtools_SplitOnRG" name="Split BAM on ReadGroups" force_history_refresh="True">
2 <description/> 2 <description/>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="2.3.0">bamtools</requirement> 4 <requirement type="package" version="2.3.0">bamtools</requirement>
5 <requirement type="package" version="0.1.18">samtools</requirement>
6
5 </requirements> 7 </requirements>
6 <command interpreter="perl"> 8 <command interpreter="perl">
7 SplitOnRg.pl -i '$input1' -o $output1 -O $output1.id -k $dbkey -p $__new_file_path__ 9 SplitOnRg.pl -i '$input1' -o $output1 -O $output1.id -k $dbkey -p $__new_file_path__
8 </command> 10 </command>
9 <inputs> 11 <inputs>