| Wed, 29 Nov 2017 08:39:31 -0500 |
geert-vandeweyer |
bugfix
draft default tip
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| Wed, 29 Nov 2017 08:12:27 -0500 |
geert-vandeweyer |
revised routines. Better handling of collapsing, isoforms and mutiple mapppings. Barplots revised to visualise average base coverage in exon instead of total number of reads in exon
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| Thu, 12 Feb 2015 09:54:03 -0500 |
geert-vandeweyer |
Added BED format check before collapsing regions.
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| Thu, 12 Feb 2015 08:51:37 -0500 |
geert-vandeweyer |
Added (default) option to collapse repetitive bed files
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| Thu, 12 Feb 2015 08:51:06 -0500 |
geert-vandeweyer |
Added (default) option to collapse repetitive BED files.
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| Mon, 17 Nov 2014 07:10:11 -0500 |
geert-vandeweyer |
Correction to png calls to use cairo instead of x11. thanks to Eric Enns for pointing this out.
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| Thu, 06 Nov 2014 04:28:02 -0500 |
geert-vandeweyer |
Correction of tool_dependencies regarding R version
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| Thu, 06 Nov 2014 03:40:42 -0500 |
geert-vandeweyer |
changed tool.xml to request R 3.0.3
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| Thu, 06 Nov 2014 03:35:57 -0500 |
geert-vandeweyer |
new version 0.0.3 (fix on headless R)
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| Wed, 18 Jun 2014 08:18:10 -0400 |
geert-vandeweyer |
Uploaded
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| Wed, 18 Jun 2014 08:17:59 -0400 |
geert-vandeweyer |
Uploaded
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| Wed, 18 Jun 2014 08:15:10 -0400 |
geert-vandeweyer |
correcting tool_dependencies
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| Wed, 18 Jun 2014 08:14:43 -0400 |
geert-vandeweyer |
Uploaded
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| Wed, 18 Jun 2014 07:26:16 -0400 |
geert-vandeweyer |
Somehow the tool dependencies got reversed to an old version leading to issues with R png function
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| Thu, 20 Feb 2014 08:57:52 -0500 |
geert-vandeweyer |
Uploaded
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| Thu, 20 Feb 2014 08:57:09 -0500 |
geert-vandeweyer |
Switched to R 3.0.2 from iuc, and moved bedtools to seperate tool_definition
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| Mon, 17 Feb 2014 09:49:16 -0500 |
geert-vandeweyer |
Hard Coded to use /usr/bin/Rscript instead of dependency one. Will revert when X11 issue is resolved.
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| Fri, 14 Feb 2014 07:57:17 -0500 |
geert-vandeweyer |
update to dependencies.xml
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| Fri, 14 Feb 2014 07:55:49 -0500 |
geert-vandeweyer |
Uploaded
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| Thu, 13 Feb 2014 05:07:15 -0500 |
geert-vandeweyer |
Change to tool_dependencies. BedTools would not install.
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| Thu, 13 Feb 2014 04:49:58 -0500 |
geert-vandeweyer |
Uploaded
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| Thu, 13 Feb 2014 04:49:40 -0500 |
geert-vandeweyer |
Deleted selected files
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| Thu, 13 Feb 2014 04:46:46 -0500 |
geert-vandeweyer |
Uploaded
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| Thu, 13 Feb 2014 04:45:56 -0500 |
geert-vandeweyer |
Uploaded
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