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1 <tool id="DownloadFiles" name="Files_2_FTP" version="0.0.1">
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2 <description>Copy Files to your FTP account for easy download</description>
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3 <command interpreter="python">DownloadFiles.py "$outfile" "$__user_email__" "$foldername" "$__app__.config.ftp_upload_dir"
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4 #for $q in $datafiles
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5 "${q.input2}" "${q.input2.display_name}" "${q.input2.ext}"
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6 #end for
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7
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8 </command>
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9 <inputs>
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10 <param name="foldername" type="text" label="Folder To Create on FTP server" help="This folder will hold the transferred data"/>
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11 <repeat name="datafiles" title="Data Files to download">
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12 <!-- <param format="bam,tabular,bed,ab1,afg,axt,bedgraph,bedstrict,bed6,bed12,len,bigbed,bigwig,coverage,csv,customtrack,bowtie_color_index,bowtie_base_index,fastq,fastqsanger,fastqsolexa,fastqcssanger,fastqillumina,eland,elandmulti,genetrack,gff,gff3,gif,gmaj.zip,gtf,html,interval,picard_interval_list,gatk_interval,gatk_dbsnp,jpg,laj,lav,maf,mafcustomtrack,pdf,pileup,png,qual,qualsolexa,qualillumina,qualsolid,qual454,Roadmaps,sam,scf,Sequences,sff,svg,taxonomy,txt,memexml,blastxml,vcf,wsf,velvet,wig" name="input2" type="data" label="Select" /> -->
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13 <param name="input2" type="data" label="Select" />
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14 </repeat>
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15
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16 </inputs>
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17 <outputs>
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18 <data format="html" name="outfile" />
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19 </outputs>
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20
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21 <help>
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22 **What it does**
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23
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24 Copies selected datasets to your FTP account on this galaxy instance. You can then use an FTP client to download the files.
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25 The files will be placed in a subfolder with the specified name. If no name is specified, a folder with the current data will be used.
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26 **Input**
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27
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28 Any dataset from the history.
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29
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30 **Output**
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31
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32 An html file, with an overview of the copied files.
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33
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34 </help>
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35
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36 </tool>
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