|
0
|
1 #This is a sample file distributed with Galaxy that enables the multiplicom primer trimmer
|
|
|
2 #tool to locate genome files for use with 2bit. You will
|
|
|
3 #need to supply these files and then create a 2bit.loc file
|
|
|
4 #similar to this one (store it in this directory) that points to
|
|
|
5 #the directories in which those files are stored. The 2bit.loc
|
|
|
6 #file has this format (white space characters are TAB characters):
|
|
|
7 #
|
|
|
8 #<unique_build_id> <display_name> <2bit_path>
|
|
|
9 #
|
|
|
10 #for example:
|
|
|
11 #
|
|
|
12 #hg19 Human (Homo sapiens): hg19 /depot/data2/galaxy/twobit/hg19.2bit
|
|
|
13 #
|
|
|
14 #then your /depot/data2/galaxy/twobit/ directory
|
|
|
15 #would need to contain the following 2bit files:
|
|
|
16 #
|
|
|
17 #-rw-r--r-- 1 james universe 527388 2005-09-13 10:12 hg19.2bit
|
|
|
18 #
|
|
|
19
|
