Mercurial > repos > gga > chado_analysis_get_analyses
diff analysis_get_analyses.xml @ 7:304b8f21bb97 draft
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit f5c5d81fc9781371e12b91c0d609b9201587cda5
| author | gga |
|---|---|
| date | Fri, 23 Nov 2018 11:01:49 -0500 |
| parents | 693fd0ba9cf2 |
| children | 5812e9cddfa8 |
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--- a/analysis_get_analyses.xml Mon Nov 05 12:12:28 2018 -0500 +++ b/analysis_get_analyses.xml Fri Nov 23 11:01:49 2018 -0500 @@ -1,11 +1,11 @@ <?xml version="1.0"?> <tool id="analysis_get_analyses" name="Chado analysis get" version="@WRAPPER_VERSION@.0"> - <description></description> - <macros> - <import>macros.xml</import> - </macros> - <expand macro="requirements"/> - <command detect_errors="aggressive"><![CDATA[ + <description></description> + <macros> + <import>macros.xml</import> + </macros> + <expand macro="requirements"/> + <command detect_errors="aggressive"><![CDATA[ @AUTH@ chakin analysis get_analyses @@ -40,27 +40,25 @@ | jq -S . > $results ]]></command> - <inputs> - <!-- arguments --> - + <inputs> <!-- options --> - <param name="analysis_id" label="Analysis Id" argument="analysis_id" type="integer" help="analysis_id filter" optional="True" /> - <param name="name" label="Name" argument="name" type="text" help="analysis name filter" optional="True" /> - <param name="program" label="Program" argument="program" type="text" help="analysis program filter" optional="True" /> - <param name="programversion" label="Programversion" argument="programversion" type="text" help="analysis programversion filter" optional="True" /> - <param name="algorithm" label="Algorithm" argument="algorithm" type="text" help="analysis algorithm filter" optional="True" /> - <param name="sourcename" label="Sourcename" argument="sourcename" type="text" help="analysis sourcename filter" optional="True" /> - <param name="sourceversion" label="Sourceversion" argument="sourceversion" type="text" help="analysis sourceversion filter" optional="True" /> - <param name="sourceuri" label="Sourceuri" argument="sourceuri" type="text" help="analysis sourceuri filter" optional="True" /> - <param name="description" label="Description" argument="description" type="text" help="analysis description" optional="True" /> + <param name="analysis_id" label="Analysis Id" argument="--analysis_id" type="integer" help="analysis_id filter" optional="True" /> + <param name="name" label="Name" argument="--name" type="text" help="analysis name filter" optional="True" /> + <param name="program" label="Program" argument="--program" type="text" help="analysis program filter" optional="True" /> + <param name="programversion" label="Programversion" argument="--programversion" type="text" help="analysis programversion filter" optional="True" /> + <param name="algorithm" label="Algorithm" argument="--algorithm" type="text" help="analysis algorithm filter" optional="True" /> + <param name="sourcename" label="Sourcename" argument="--sourcename" type="text" help="analysis sourcename filter" optional="True" /> + <param name="sourceversion" label="Sourceversion" argument="--sourceversion" type="text" help="analysis sourceversion filter" optional="True" /> + <param name="sourceuri" label="Sourceuri" argument="--sourceuri" type="text" help="analysis sourceuri filter" optional="True" /> + <param name="description" label="Description" argument="--description" type="text" help="analysis description" optional="True" /> - </inputs> - <outputs> - <data format="json" name="results"/> - </outputs> - <help> + </inputs> + <outputs> + <data format="json" name="results"/> + </outputs> + <help> Get all or some analyses @HELP@ - </help> + </help> </tool>