Mercurial > repos > gga > chado_export_export_fasta
comparison export_export_fasta.xml @ 0:5f69e36413a4 draft
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 81a83f06b49db32928ba0cd44e5b6d0431868d27
| author | gga |
|---|---|
| date | Thu, 21 Jun 2018 08:42:42 -0400 |
| parents | |
| children | 2875b454d1c2 |
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| -1:000000000000 | 0:5f69e36413a4 |
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| 1 <?xml version="1.0"?> | |
| 2 <tool id="export_export_fasta" name="Chado export fasta" version="@WRAPPER_VERSION@.0"> | |
| 3 <description></description> | |
| 4 <macros> | |
| 5 <import>macros.xml</import> | |
| 6 </macros> | |
| 7 <expand macro="requirements"/> | |
| 8 <code file="chado.py"/> | |
| 9 <command detect_errors="aggressive"><![CDATA[ | |
| 10 @AUTH@ | |
| 11 | |
| 12 chakin export export_fasta | |
| 13 '$organism' | |
| 14 | |
| 15 > $results | |
| 16 ]]></command> | |
| 17 <inputs> | |
| 18 <!-- arguments --> | |
| 19 <param argument="--organism" | |
| 20 type="select" | |
| 21 dynamic_options="list_organisms()" | |
| 22 label="Organism" /> | |
| 23 <expand macro="wait_for"/> | |
| 24 | |
| 25 </inputs> | |
| 26 <outputs> | |
| 27 <data format="fasta" name="results"/> | |
| 28 </outputs> | |
| 29 <help> | |
| 30 Export reference sequences as fasta. | |
| 31 | |
| 32 @HELP@ | |
| 33 </help> | |
| 34 </tool> |