Mercurial > repos > gga > chado_organism_get_organisms

diff organism_get_organisms.xml @ 10:d404c87b322c draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 0b135f1ea2623ea68e41ac88e13d99e6b4ad8bea
author gga
date Mon, 08 Jul 2019 05:38:19 -0400
parents a3e4a405189e
children 75818f023ff4
line wrap: on
line diff
--- a/organism_get_organisms.xml	Tue Mar 05 05:16:53 2019 -0500
+++ b/organism_get_organisms.xml	Mon Jul 08 05:38:19 2019 -0400
@@ -6,7 +6,7 @@
 	</macros>
 	<expand macro="requirements"/>
 	<command detect_errors="aggressive"><![CDATA[
-@AUTH@
+@START_PSQL@ &&
 
 chakin organism get_organisms
 
@@ -30,8 +30,11 @@
 #end if
 
 | jq -S . > '$results'
+
+&& @STOP_PSQL@
     ]]></command>
 	<inputs>
+    <expand macro="psql_target"/>
     <!-- arguments -->
 
     <!-- options -->