view utils.py @ 0:ed8a9ea5bc73 draft default tip

planemo upload for repository https://github.com/goeckslab/Galaxy-Ludwig.git commit bdea9430787658783a51cc6c2ae951a01e455bb4
author goeckslab
date Tue, 07 Jan 2025 22:45:58 +0000
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import base64
import json


def get_html_template():
    return """
    <html>
    <head>
        <title>Galaxy-Ludwig Report</title>
        <style>
          body {
              font-family: Arial, sans-serif;
              margin: 0;
              padding: 20px;
              background-color: #f4f4f4;
          }
          .container {
              max-width: 800px;
              margin: auto;
              background: white;
              padding: 20px;
              box-shadow: 0 0 10px rgba(0, 0, 0, 0.1);
              overflow-x: auto;
          }
          h1 {
              text-align: center;
              color: #333;
          }
          h2 {
              border-bottom: 2px solid #4CAF50;
              color: #4CAF50;
              padding-bottom: 5px;
          }
          table {
              border-collapse: collapse;
              margin: 20px 0;
              width: 100%;
              table-layout: fixed; /* Enforces consistent column widths */
          }
          table, th, td {
              border: 1px solid #ddd;
          }
          th, td {
              padding: 8px;
              text-align: center; /* Center-align text */
              vertical-align: middle; /* Center-align content vertically */
              word-wrap: break-word; /* Break long words to avoid overflow */
          }
          th:first-child, td:first-child {
              width: 5%; /* Smaller width for the first column */
          }
          th:nth-child(2), td:nth-child(2) {
              width: 50%; /* Wider for the metric/description column */
          }
          th:last-child, td:last-child {
              width: 25%; /* Value column gets remaining space */
          }
          th {
              background-color: #4CAF50;
              color: white;
          }
          .plot {
              text-align: center;
              margin: 20px 0;
          }
          .plot img {
              max-width: 100%;
              height: auto;
          }
        </style>
    </head>
    <body>
    <div class="container">
    """


def get_html_closing():
    return """
    </div>
    </body>
    </html>
    """


def encode_image_to_base64(image_path):
    """Convert an image file to a base64 encoded string."""
    with open(image_path, "rb") as img_file:
        return base64.b64encode(img_file.read()).decode("utf-8")


def json_to_nested_html_table(json_data, depth=0):
    """
    Convert JSON object to an HTML nested table.

    Parameters:
        json_data (dict or list): The JSON data to convert.
        depth (int): Current depth level for indentation.

    Returns:
        str: HTML string for the nested table.
    """
    # Base case: if JSON is a simple key-value pair dictionary
    if isinstance(json_data, dict) and all(
        not isinstance(v, (dict, list)) for v in json_data.values()
    ):
        # Render a flat table
        rows = [
            f"<tr><th>{key}</th><td>{value}</td></tr>"
            for key, value in json_data.items()
        ]
        return f"<table>{''.join(rows)}</table>"

    # Base case: if JSON is a list of simple values
    if isinstance(json_data, list) and all(
        not isinstance(v, (dict, list)) for v in json_data
    ):
        rows = [
            f"<tr><th>Index {i}</th><td>{value}</td></tr>"
            for i, value in enumerate(json_data)
        ]
        return f"<table>{''.join(rows)}</table>"

    # Recursive case: if JSON contains nested structures
    if isinstance(json_data, dict):
        rows = [
            f"<tr><th style='padding-left:{depth * 20}px;'>{key}</th>"
            f"<td>{json_to_nested_html_table(value, depth + 1)}</td></tr>"
            for key, value in json_data.items()
        ]
        return f"<table>{''.join(rows)}</table>"

    if isinstance(json_data, list):
        rows = [
            f"<tr><th style='padding-left:{depth * 20}px;'>[{i}]</th>"
            f"<td>{json_to_nested_html_table(value, depth + 1)}</td></tr>"
            for i, value in enumerate(json_data)
        ]
        return f"<table>{''.join(rows)}</table>"

    # Base case: simple value
    return f"{json_data}"


def json_to_html_table(json_data):
    """
    Convert JSON to a vertically oriented HTML table.

    Parameters:
        json_data (str or dict): JSON string or dictionary.

    Returns:
        str: HTML table representation.
    """
    if isinstance(json_data, str):
        json_data = json.loads(json_data)
    return json_to_nested_html_table(json_data)