Mercurial > repos > goeckslab > mesmer

diff mesmer.xml @ 1:02abff468d60 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/mesmer commit 374e4528db4e3ce7984e2ed2c2bae55c19c17371
author goeckslab
date Thu, 10 Nov 2022 20:38:34 +0000
parents 53240d7c1fc5
children 187918c47051
line wrap: on
line diff
--- a/mesmer.xml	Thu Sep 08 15:17:30 2022 +0000
+++ b/mesmer.xml	Thu Nov 10 20:38:34 2022 +0000
@@ -6,6 +6,7 @@
     </macros>
 
     <expand macro="requirements"/>
+    <expand macro="stdio"/>
     <expand macro="version_cmd"/>
 
     <command detect_errors="exit_code"><![CDATA[
@@ -53,8 +54,8 @@
         <test>
             <param name="nuclear_image" value="test.tiff" />
             <param name="compartment" value="nuclear" />
-            <param name="membrane_select.membrane_segment" value="False" />
-            <param name="image_mmp" value="0.65" />
+            <param name="membrane_segment" value="False" />
+            <param name="image_mpp" value="0.65" />
             <param name="squeeze" value="--squeeze" />
             <output name="mask" ftype="tiff">
                 <assert_contents>