Mercurial > repos > goeckslab > squidpy

diff squidpy_spatial.xml @ 2:4a058bd23a12 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/squidpy commit ae0f7f9e0f265031ce1a9c1cadea109b0e1b81aa
author goeckslab
date Mon, 29 Apr 2024 20:42:57 +0000
parents bad34051dc8a
children d30ef0613122
line wrap: on
line diff
--- a/squidpy_spatial.xml	Wed Feb 28 20:52:29 2024 +0000
+++ b/squidpy_spatial.xml	Mon Apr 29 20:42:57 2024 +0000
@@ -82,7 +82,7 @@
                 <param argument="cluster_key" type="text" value="" optional="false" label="Key in anndata.AnnData.obs where clustering is stored" />
                 <expand macro="squidpy_spatial_options">
                     <param argument="spatial_key" type="text" value="spatial" optional="false" label="The Key where spatial coordinates are stored" help="Key in `anndata.AnnData.obsm`." />
-                    <param argument="n_steps" type="integer" value="50" label="Number of distance thresholds at which co-occurrence is computed" />
+                    <param argument="interval" type="integer" value="50" label="Number of distance thresholds at which co-occurrence is computed" />
                     <param argument="n_splits" type="integer" value="" optional="true" label="Number of splits in which to divide the spatial coordinates" help="In anndata.AnnData.obsm ['{spatial_key}']." />
                 </expand>
                 <expand macro="squidpy_plotting_options">