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comparison test-data/create/sequences.ffdata @ 0:ad4b7db26523 draft

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"planemo upload commit b68cb41b1884703c4f1574b65a6408d7d0cca321"
author guerler
date Tue, 23 Mar 2021 23:06:45 +0000
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-1:000000000000 0:ad4b7db26523
1 Query NP_000282.1
2 Match_columns 417
3 No_of_seqs 604 out of 4515
4 Neff 6.98956
5 Searched_HMMs 787
6 Date Fri Jul 24 20:35:21 2020
7 Command /home/guerler/hh-suite/build/bin/hhblits -i /home/guerler/human/fasta/NP_00/NP_000282.1.fasta -d /home/guerler/pdb70/pdb70 -o /home/guerler/human/hhr/NP_00/NP_000282.1.hhr
8
9 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
10 1 2WZB_A PHOSPHOGLYCERATE KINASE 100.0 9E-114 7E-118 875.1 0.0 415 3-417 2-416 (416)
11 2 1HDI_A PHOSPHOGLYCERATE KINASE 100.0 4E-113 3E-117 868.7 0.0 412 6-417 2-413 (413)
12 3 6Y3A_A Phosphoglycerate kinase 100.0 3E-112 2E-116 865.4 0.0 414 2-416 9-423 (424)
13 4 3UWD_A Phosphoglycerate kinase 100.0 7E-112 6E-116 855.6 0.0 391 4-416 1-393 (394)
14 5 1QPG_A 3-PHOSPHOGLYCERATE KINA 100.0 7E-112 6E-116 861.3 0.0 413 2-416 1-413 (415)
15 6 3PGK_A PHOSPHOGLYCERATE KINASE 100.0 8E-112 7E-116 861.3 0.0 413 2-416 2-414 (416)
16 7 3Q3V_A Phosphoglycerate kinase 100.0 3E-111 3E-115 852.3 0.0 392 2-416 3-399 (403)
17 8 1PHP_A 3-PHOSPHOGLYCERATE KINA 100.0 1E-110 9E-115 847.6 0.0 387 8-416 5-393 (394)
18 9 1VPE_A PHOSPHOGLYCERATE KINASE 100.0 1E-110 1E-114 848.4 0.0 392 6-416 2-395 (398)
19 10 4FEY_A Phosphoglycerate kinase 100.0 6E-110 5E-114 842.0 0.0 388 2-416 2-391 (395)
20 11 1V6S_B Phosphoglycerate kinase 100.0 1E-109 1E-113 838.8 0.0 386 7-416 2-390 (390)
21 12 3ZLB_A PHOSPHOGLYCERATE KINASE 100.0 2E-109 1E-113 840.0 0.0 394 4-416 1-397 (398)
22 13 4EHJ_A Phosphoglycerate kinase 100.0 2E-109 2E-113 837.1 0.0 386 4-416 1-388 (392)
23 14 16PK_A 3-PHOSPHOGLYCERATE KINA 100.0 4E-109 4E-113 840.3 0.0 395 6-416 2-414 (415)
24 15 3OZ7_B Phosphoglycerate kinase 100.0 4E-109 4E-113 840.5 0.0 413 3-416 4-417 (417)
25 16 4DG5_A Phosphoglycerate kinase 100.0 5E-109 4E-113 836.1 0.0 392 5-416 9-402 (403)
26 17 6HXE_A Phosphoglycerate kinase 100.0 4E-108 4E-112 826.1 0.0 381 4-416 1-383 (387)
27 18 4NG4_B Phosphoglycerate kinase 100.0 5E-108 4E-112 830.0 0.0 389 1-416 9-399 (404)
28 19 4NG4_C Phosphoglycerate kinase 100.0 5E-108 4E-112 830.0 0.0 389 1-416 9-399 (404)
29 20 6I06_A Phosphoglycerate kinase 100.0 1E-107 9E-112 823.4 0.0 381 4-416 1-383 (387)
30 21 2CUN_A Phosphoglycerate kinase 100.0 3E-105 3E-109 811.0 0.0 387 8-416 3-400 (410)
31 22 1FW8_A PHOSPHOGLYCERATE KINASE 100.0 8.8E-90 7.6E-94 698.3 0.0 342 74-416 2-343 (416)
32 23 1FW8_A PHOSPHOGLYCERATE KINASE 99.3 3.2E-16 2.7E-20 156.7 0.0 68 3-70 347-414 (416)
33 24 2Q33_B D-MONELLIN CHAIN A, D-M 34.3 5.9 0.00042 24.6 0.0 11 310-320 2-12 (48)
34
35 No 1
36 >2WZB_A PHOSPHOGLYCERATE KINASE 1 (E.C.2.7.2.3); HEREDITARY HEMOLYTIC ANEMIA, TRANSFERASE, PHOSPHOPROTEIN; HET: ADP, 3PG; 1.47A {HOMO SAPIENS}
37 Probab=100.00 E-value=8.6e-114 Score=875.06 Aligned_cols=415 Identities=100% Similarity=1.449 Sum_probs=363.4 Template_Neff=6.400
38
39 Q NP_000282.1 3 LSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVA 82 (417)
40 Q Consensus 3 ~~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va 82 (417)
41 +..|++++|.|++|||||||+|+|||+++++|.|++||++++|||+||+++||++|||+||+|||+++..++.+||+||+
42 T Consensus 2 ~~~~~~l~~~~l~gK~vlvR~D~NVPl~~~~i~dd~RI~~~lpTI~~Ll~~gak~vil~sHlGrP~g~~~~~~~Sl~pv~ 81 (416)
43 T 2WZB_A 2 LSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVA 81 (416)
44 T ss_dssp CTTBCBGGGCCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCCHHHHCSHHHH
45 T ss_pred CcccccccccccCCCEEEEEeEccccccCCccCCChHHHHHHHHHHHHHHCCCCEEEEEeeCCCCCCCCCCcccChHHHH
46 Confidence 45788898889999999999999999998899999999999999999999999448999999999875323479999999
47
48
49 Q NP_000282.1 83 VELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYV 162 (417)
50 Q Consensus 83 ~~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~DiyV 162 (417)
51 ++|+++|+.+|.|+++|+|+++++.++.+++|+|+||||+|||++|+++++++++|+.+++.+++.+|+++||+++|+||
52 T Consensus 82 ~~L~~~l~~~v~f~~d~~g~~~~~~i~~~~~g~illLENlRF~~~E~~~~~~~~~n~~k~~~~~~~~fa~~La~l~DiyV 161 (416)
53 T 2WZB_A 82 VELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYV 161 (416)
54 T ss_dssp HHHHHHHTSCCEECSCSSSHHHHHHHHSCCTTEEEECCCGGGSHHHHTCC----------CHHHHHHHHHHHHHTCSEEE
55 T ss_pred HHHHHHhCCEEEEcccCCCHHHHHHHhCCCCCcEEEEeccccchhhcCCCCCCCCccccCCHHHHHHHHHHHhcccceEE
56 Confidence 99999998779999999998888888899999999999999998776331111111111112234679999999999999
57
58
59 Q NP_000282.1 163 NDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAF 242 (417)
60 Q Consensus 163 NDAFg~aHR~~aS~~gi~l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a~ 242 (417)
61 |||||++||.|||++++++|+++||++|++||++|++++++|+||+++|+||+|++||+++|++|+++||.|++||+|||
62 T Consensus 162 NDAF~~~HR~hAS~vgi~lp~s~aG~ll~kEl~~L~~~~~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~IligG~~a~ 241 (416)
63 T 2WZB_A 162 NDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAF 241 (416)
64 T ss_dssp ECCGGGTTCCCHHHHCCCCSCEEECHHHHHHHHHHHHHHHSCCSSEEEEECSSCHHHHGGGHHHHTTTCSEEEECGGGHH
65 T ss_pred ecccccCCCccccccccCCCccchHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHHHHHhCCEEEeCcHHHH
66 Confidence 99999999999999999976589999999999999999999999999999999999999999999998999999999999
67
68
69 Q NP_000282.1 243 TFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSK 322 (417)
70 Q Consensus 243 tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~ 322 (417)
71 +||+|++++++|+|++|++..+.|++++++|+.++++|+||+|++|.+.+..+.....+.....+|++|+++||||+|++
72 T Consensus 242 tfL~a~~~~~ig~S~~e~~~~~~a~~il~~a~~~~~kI~LP~D~vv~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~ 321 (416)
73 T 2WZB_A 242 TFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSK 321 (416)
74 T ss_dssp HHHHHHHCCCCTTSCCCHHHHTTHHHHHHHHHHTTCEEECCCEEEEESSSSTTCCEEEEETTTCCCTTCEEEEECHHHHH
75 T ss_pred HHHHHhCCCccccceecchHHHHHHHHHHHHHHcCCEEEceeeEEecccccccccCCeeeecCCCCCCceeecCCHHHHH
76 Confidence 99999856689999999999999999999988999999999999999865332211111112378899999999999999
77
78
79 Q NP_000282.1 323 KYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLEL 402 (417)
80 Q Consensus 323 ~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le~ 402 (417)
81 .|+++|++|||||||||||+||.++|++||+++++++++++++++++|+|||||+++++++|+.++++||||||||+|||
82 T Consensus 322 ~~~~~I~~aktI~wNGP~G~~E~~~f~~GT~~ia~al~~~~~~~a~~ivGGGdT~~~~~~~g~~~~~s~vSTGGGA~L~~ 401 (416)
83 T 2WZB_A 322 KYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLEL 401 (416)
84 T ss_dssp HHHHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEEESTTHHHHHHHTTCTTSSSEEESCSHHHHHH
85 T ss_pred HHHHHHHhCCEEEEcCCCCcccchhhchHHHHHHHHHHHHhcCCcEEEEecccHHHHHHHcCCCccCeEEecCcHHHHHH
86 Confidence 99999999999999999999998889999999999997632247899999999999998889888899999999999999
87
88
89 Q NP_000282.1 403 LEGKVLPGVDALSNI 417 (417)
90 Q Consensus 403 L~G~~LPgl~aL~~~ 417 (417)
91 |+|++||||++|+++
92 T Consensus 402 L~G~~LPgieaL~~~ 416 (416)
93 T 2WZB_A 402 LEGKVLPGVDALSNI 416 (416)
94 T ss_dssp HHTCCCHHHHTSCBC
95 T ss_pred HcCCCCchHHHHhcC
96 Confidence 999999999999875
97
98
99 No 2
100 >1HDI_A PHOSPHOGLYCERATE KINASE (E.C.2.7.2.3); PHOSPHOTRANSFERASE, KINASE, PHOSPHOGLYCERATE, TERNARY COMPLEX; HET: AMP, 3PG; 1.8A {SUS SCROFA} SCOP: c.86.1.1
101 Probab=100.00 E-value=4.1e-113 Score=868.67 Aligned_cols=412 Identities=91% Similarity=1.360 Sum_probs=361.3 Template_Neff=6.300
102
103 Q NP_000282.1 6 KLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAVEL 85 (417)
104 Q Consensus 6 ~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va~~L 85 (417)
105 +++++|.|++|||||||+|+|||+++++|.|++||++++|||+||+++||++|||+||+|||+++..++.+||+||+++|
106 T Consensus 2 ~~~l~~~~l~gK~vlvR~D~NVPi~~~~i~dd~RI~~~lpTI~~Ll~~gak~vil~sHlGRP~g~~~~~~~Sl~pva~~L 81 (413)
107 T 1HDI_A 2 KLTLDKLNVKGKRVVMRVDFNVPMAAAQITNNARIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSPMPDKYSLQPVAAEL 81 (413)
108 T ss_dssp BCBGGGSCCTTCEEEEECCCCCCBSSSSBSCCHHHHHHHHHHHHHHHTTCSEEEEECCCSCCCSSCCTTTSCSHHHHHHH
109 T ss_pred CccccccccCCCEEEEEeecCccccccccCCChHHHHHHHHHHHHHHCCCCEEEEEeeCCCCCCCCCCcccccHHHHHHH
110 Confidence 56777788999999999999999988899999999999999999999999448999999999875323479999999999
111
112
113 Q NP_000282.1 86 KSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDA 165 (417)
114 Q Consensus 86 ~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~DiyVNDA 165 (417)
115 +++|+.+|.|+++|+|+++.+.++.+++|+|+||||+|||++|+++++++++|+.+.+.+++.+|++.||+++|+|||||
116 T Consensus 82 ~~~l~~~V~f~~d~~g~~~~~~i~~~~~g~illLENlRF~~~E~~~~~~~~~n~~~~~~~~~~~fa~~La~l~DiyVnDA 161 (413)
117 T 1HDI_A 82 KSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRFHVEEEGKGKDASGNKAAGEPAKIKAFRASLSALGDVYVNDA 161 (413)
118 T ss_dssp HHHHTSCCEECSCSSSHHHHHHHHSCCTTEEEECCCGGGSHHHHTEEECTTSCEEECCHHHHHHHHHHHHHTCSEEEECC
119 T ss_pred HHHhCCEEEEccccCCHHHHHHhhCCCCCCEEEeeccccchhhcCCCCCCCcccccCCHHHHHHHHHHHHhccccEeecc
120 Confidence 99998779999999998888888999999999999999999776331100011101111224679999999999999999
121
122
123 Q NP_000282.1 166 FGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFL 245 (417)
124 Q Consensus 166 Fg~aHR~~aS~~gi~l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a~tfl 245 (417)
125 |+++||.|||++++++|+++||++|++||++|.+++++|+||+++|+||+|++||+++|++|+++||.|++||+|||+||
126 T Consensus 162 F~~~HR~hAS~vgi~lp~~~aG~l~~kEi~~L~~~~~~p~rP~v~IlGGaKv~dKi~li~~Ll~~~D~IliGG~~a~tFL 241 (413)
127 T 1HDI_A 162 FGTAHRAHSSMVGVNLPKKAGAFLMKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFL 241 (413)
128 T ss_dssp GGGTTCCCHHHHCCCCSCEEECHHHHHHHHHHHHHHTSCCSSEEEEECCSCSGGGHHHHHHHHTTCSEEEECGGGHHHHC
129 T ss_pred cccCCCCCCCccccCCchhHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHHHHHcCCEEEECchHHHHHH
130 Confidence 99999999999999986579999999999999999999999999999999999999999999999999999999999999
131
132
133 Q NP_000282.1 246 KVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYA 325 (417)
134 Q Consensus 246 ~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~~~~ 325 (417)
135 +|++++++|+|++|++..+.|++++++|+.++++|++|+|++|.+.+..+...........+|++|+++||||+|++.|+
136 T Consensus 242 ~a~g~~~iG~Sl~e~~~~~~a~~il~~a~~~~~ki~lP~D~vv~~~~~~~~~~~~~~~~~~ip~~~~ilDIGp~Ti~~~~ 321 (413)
137 T 1HDI_A 242 KVLNNMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKFDEQAKIGQATVASGIPAGWMGLDCGPKSSAKYS 321 (413)
138 T ss_dssp CCCCCCCBTTCCCCTTGGGTHHHHHHHHHHHTCEEECCCEEEEESSSSTTCCEEEEETTTCBCTTCEEEEECHHHHHHHH
139 T ss_pred HHhCCCcccceeechhHHHHHHHHHHHHHHCCCeEEceeeEEeccccchhcccceeeecCCCCCCcccccCCHHHHHHHH
140 Confidence 99855689999999999999999999988999999999999999875432211111112378899999999999999999
141
142
143 Q NP_000282.1 326 EAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEG 405 (417)
144 Q Consensus 326 ~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le~L~G 405 (417)
145 ++|++|||||||||||+||.++|++||+++++++++++++++++|+|||||+++++++|+.++++||||||||+||||+|
146 T Consensus 322 ~~I~~aktI~wnGP~G~~E~~~f~~GT~~ia~~i~~~~~~~a~sivGGGdT~~~~~~~g~~~~~~~vSTGGGA~Le~L~g 401 (413)
147 T 1HDI_A 322 EAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLELLEG 401 (413)
148 T ss_dssp HHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECTTHHHHHHHHTTCTTTSSEECSCHHHHHHHHTT
149 T ss_pred HHHHhCCEEEEeCCCCcccchhhchHHHHHHHHHHHHhcCCcEEEEecccHHHHHHHcCCCCCCEEEecChHHHHHHHcC
150 Confidence 99999999999999999988789999999999997632247899999999999888888888899999999999999999
151
152
153 Q NP_000282.1 406 KVLPGVDALSNI 417 (417)
154 Q Consensus 406 ~~LPgl~aL~~~ 417 (417)
155 +.||||++|+++
156 T Consensus 402 k~LPgi~aL~~~ 413 (413)
157 T 1HDI_A 402 KVLPGVDALSNV 413 (413)
158 T ss_dssp CCCHHHHTSCBC
159 T ss_pred CCCchHHHhhcC
160 Confidence 999999999874
161
162
163 No 3
164 >6Y3A_A Phosphoglycerate kinase (E.C.2.7.2.3); phosphoglycerate kinase, metabolic enzyme, kinase; 1.49A {Plasmodium vivax}
165 Probab=100.00 E-value=2.6e-112 Score=865.36 Aligned_cols=414 Identities=59% Similarity=0.970 Sum_probs=363.7 Template_Neff=6.300
166
167 Q NP_000282.1 2 SLSNKLTLDKL-DVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEP 80 (417)
168 Q Consensus 2 ~~~~~~~i~~~-~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~ 80 (417)
169 ++.+++++.|. |++|||||||+|+|||+++++|.|++||++++|||+||+++||++|||+||+|||+++. .+++||+|
170 T Consensus 9 ~~~~~~~~~~~~~l~gK~vlvRvD~NVPl~~~~i~dd~RI~~~lpTI~~Ll~~gak~vil~sHlGRP~g~~-~~~~Sl~p 87 (424)
171 T 6Y3A_A 9 SLGNKLSITDVKAIQGKKVLVRVDFNVPIENGVIKDTNRITATLPTIHHLKKEGAAKIILISHCGRPDGTK-NLKYTLKP 87 (424)
172 T ss_dssp CCTTBCBGGGCCCCTTCEEEEECCCCCCEETTEESCCHHHHTTHHHHHHHHHTTCSEEEEECCCSCCTTSC-CGGGCSHH
173 T ss_pred cCCCCccccchHHhCCCEEEEEeecCCcccCCccCCChHHHhHHHHHHHHHHCCCCEEEEEeeCCCCCCCc-cccccHHH
174 Confidence 46788999997 89999999999999999888999999999999999999999994499999999998764 56899999
175
176
177 Q NP_000282.1 81 VAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDV 160 (417)
178 Q Consensus 81 va~~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~Di 160 (417)
179 |+++|+++|+.+|.|+++|+|+++.+.++.+++|+|+||||+|||++|+++++++++|+.++..+++.+|+++||+++|+
180 T Consensus 88 va~~L~~~l~~~v~f~~d~~g~~~~~~i~~~~~g~illLENlRF~~~E~~~~~~~~~n~~~~~~~~~~~fa~~LA~l~Di 167 (424)
181 T 6Y3A_A 88 VAETLGTLLGEEVLFLSDCVGEEVAAQINQAKDNSVILLENLRFHVEEEGKGVDAAGNKIKASKEDMEKFQNELTKLGDV 167 (424)
182 T ss_dssp HHHHHHHHHTSCCEECSCSSSHHHHHHHHHSCTTEEEECCCGGGSHHHHSEEECTTSCEEECCHHHHHHHHHHHHTTCSE
183 T ss_pred HHHHHHHHhCCEEEeccccCCHHHHHHHHhccCCCEEEeccccccchhccCCccccccccccCHHHHHHHHHHHhhccCe
184 Confidence 99999999987799999999988888889999999999999999987753211101121111122346799999999999
185
186
187 Q NP_000282.1 161 YVNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGM 240 (417)
188 Q Consensus 161 yVNDAFg~aHR~~aS~~gi~l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~ 240 (417)
189 |||||||++||.|||+++++.+.++||++|++||++|++++++|+||+++|+||+|++||+++|++|+++||.|++||+|
190 T Consensus 168 yVNDAF~~~HR~hAS~vgi~~~~s~aG~llekEl~~L~k~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~vD~IligG~~ 247 (424)
191 T 6Y3A_A 168 FINDAFGTAHRAHSSMVGIKMNVKASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDKMIIGGGM 247 (424)
192 T ss_dssp EEECCGGGTTSCCHHHHCCCCSCEEECHHHHHHHHHHHHHHTSCCSSEEEEEECSCSGGGHHHHHHHHTTCSEEEEESTH
193 T ss_pred EEecccccCccccCcchHHhccHHHhcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHHHHHcCCEEEECcHH
194 Confidence 99999999999999999999322899999999999999999999999999999999999999999999989999999999
195
196
197 Q NP_000282.1 241 AFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPES 320 (417)
198 Q Consensus 241 a~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~T 320 (417)
199 ||+||+|++++++|+|++|++..+.|++++++|+.++++|++|+|++|.+.+..+.....+.....+|++|+++||||+|
200 T Consensus 248 a~tfL~a~~~~~ig~s~~e~~~~~~a~~il~~a~~~~~ki~lP~D~vv~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~T 327 (424)
201 T 6Y3A_A 248 AYTFKYVLNNMKIGDSLFDEAGSKIVNEIMEKAKAKNVEIYLPVDFKVADKFDNNANTKVVTDEEGIEDKWMGLDAGPKS 327 (424)
202 T ss_dssp HHHHHHHHHCCCBTTSCCCHHHHTTHHHHHHHHHHTTCEEECCSEEEEESSSSTTSCEEEEETTTCBCTTCEEEEECHHH
203 T ss_pred HHHHHHHHCCCcccchhccchhHHHHHHHHHHHHHCCCeEEeeeeeeeccccCCCCCceEecCccCCCCCcccccCCHHH
204 Confidence 99999997455799999999889999999999989999999999999998753322111122224788999999999999
205
206
207 Q NP_000282.1 321 SKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASL 400 (417)
208 Q Consensus 321 i~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~L 400 (417)
209 ++.|.+.|++|||||||||||+||.++|++||+++++++++++++++++|+|||||+++++++|+.++++||||||||+|
210 T Consensus 328 i~~~~~~I~~aktI~wNGP~G~~E~e~f~~GT~~ia~al~~~~~~~a~~ivGGGdT~~~~~~~g~~~~~s~vSTGGGA~L 407 (424)
211 T 6Y3A_A 328 IENYKDVILSSKTIIWNGPQGVFEMPNFAKGSIECLNLVIEATKKGAISIVGGGDTASLVEQQQKKNEISHVSTGGGASL 407 (424)
212 T ss_dssp HHHHHHHHHTCSEEEEESCSBCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECSHHHHHHHHHTTCGGGSSEECCCTHHHH
213 T ss_pred HHHHHHHHHhCCEEEEeCCCCcccCCCcchhHHHHHHHHHHHhcCCCEEEEechHHHHHHHHhccccCcEEEEechhHHH
214 Confidence 99999999999999999999999988899999999999976322478999999999999988888788999999999999
215
216
217 Q NP_000282.1 401 ELLEGKVLPGVDALSN 416 (417)
218 Q Consensus 401 e~L~G~~LPgl~aL~~ 416 (417)
219 |||+|+.||||++|++
220 T Consensus 408 e~L~G~~LPgieaL~~ 423 (424)
221 T 6Y3A_A 408 ELLEGKELPGVVALSS 423 (424)
222 T ss_dssp HHHTTCCCHHHHTSCB
223 T ss_pred HHHcCCCCChhHHhhc
224 Confidence 9999999999999975
225
226
227 No 4
228 >3UWD_A Phosphoglycerate kinase (E.C.2.7.2.3); Anthrax, Structural Genomics, Center for; HET: BTB, MSE; 1.68A {Bacillus anthracis}
229 Probab=100.00 E-value=6.9e-112 Score=855.65 Aligned_cols=391 Identities=48% Similarity=0.845 Sum_probs=357.0 Template_Neff=6.400
230
231 Q NP_000282.1 4 SNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAV 83 (417)
232 Q Consensus 4 ~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va~ 83 (417)
233 |++++++|.|++|||||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++. .+.+||+||++
234 T Consensus 1 ~~~~~l~~~~l~gK~vlvR~D~NVPi~~~~i~dd~RI~~~lpTI~~L~~~ga-kvil~sHlGrP~g~~-~~~~sl~~va~ 78 (394)
235 T 3UWD_A 1 MNKKSIRDVDLKGKRVFCRVDFNVPMKEGKITDETRIRAALPTIQYLVEQGA-KVILASHLGRPKGQA-VEELRLTPVAA 78 (394)
236 T ss_dssp CCBCBGGGSCCTTCEEEEECCCCCCC--CCCCCCHHHHHTHHHHHHHHHTTC-EEEEECCCSCCTTSC-CGGGCSHHHHH
237 T ss_pred CCCccccccccCCCEEEEEeecCccccCCCcCCcHHHHHHHHHHHHHHHCCC-cEEEEeccCCCCCcc-chhhChHHHHH
238 Confidence 4567888888999999999999999987899999999999999999999999 599999999999864 56899999999
239
240
241 Q NP_000282.1 84 ELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVN 163 (417)
242 Q Consensus 84 ~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~DiyVN 163 (417)
243 +|+++|+.+|.|+++|+|+++++.++.+++|+|+||||+|||++|+++ +.+|++.||+++|+|||
244 T Consensus 79 ~L~~~l~~~v~f~~~~~g~~~~~~i~~~~~g~i~lLENlRf~~~E~~n---------------d~~fa~~La~l~DiyVn 143 (394)
245 T 3UWD_A 79 RLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKN---------------DAELAKEFAALADIFVN 143 (394)
246 T ss_dssp HHHHHHTSCCEECSCSSSHHHHHHHHTCCTTCEEECCCGGGSHHHHHT---------------CHHHHHHHHTTCSEEEE
247 T ss_pred HHHHHHCCEEeecCccccHHHHHHHHHccCCCEEEEecccccCccccc---------------cHHHHHHHHHhccHHHh
248 Confidence 999999877999999999888888899999999999999999876532 36799999999999999
249
250
251 Q NP_000282.1 164 DAFGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMA 241 (417)
252 Q Consensus 164 DAFg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a 241 (417)
253 ||||++||.|||+++++ +| ++||++|++|+++|++++++|+||+++|+||+|++||+++|++|+++||.|++||+||
254 T Consensus 144 DAF~~~HR~hAS~~gi~~~lp-s~aG~ll~kEl~~L~~~~~~p~~P~v~IlGGaKv~dKi~~i~~Ll~~~d~iligG~~a 222 (394)
255 T 3UWD_A 144 DAFGAAHRAHASTAGIADYLP-AVSGLLMEKELEVLGKALSNPERPFAAIIGGAKVKDKIGLIRHLLDKVDNLIIGGGLA 222 (394)
256 T ss_dssp CCGGGTTSCCTTTTGGGGTSC-EEECHHHHHHHHHHHHHHHSCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECSTTH
257 T ss_pred ccHhHhcccccchhhHhhhhH-hhhcHHHHHHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHHHHHHhCCEEEECChHH
258 Confidence 99999999999999999 77 8999999999999999999999999999999999999999999999999999999999
259
260
261 Q NP_000282.1 242 FTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESS 321 (417)
262 Q Consensus 242 ~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti 321 (417)
263 |+||+|+ |+++|+|++|++..+.|++++++|+.++++|++|+|++|.+++...+.. .+...+.+|++|+++||||+|+
264 T Consensus 223 ~tfL~a~-g~~iG~s~~e~~~~~~a~~il~~a~~~~~ki~lP~D~vv~~~~~~~~~~-~~~~~~~i~~~~~~~DIGp~Ti 300 (394)
265 T 3UWD_A 223 YTFVKAL-GHEIGLSLCEDDKIELAKEFMQLAKEKGVNFYMPVDVVITEEFSETATT-KIVGIDSIPSNWEGVDIGPKTR 300 (394)
266 T ss_dssp HHHHHHT-TCCCTTCCCCGGGHHHHHHHHHHHHHHTCEEECCSEEEEESSCSTTCCE-EEEEGGGCCTTCEEEEECHHHH
267 T ss_pred HHHHHHh-CCcccccccchHHHHHHHHHHHHHHHcCCeEEceeeEEeccccCcccce-EEeccccCCCCceeecCCHHHH
268 Confidence 9999998 8999999999999999999999988899999999999999875432211 1222357889999999999999
269
270
271 Q NP_000282.1 322 KKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLE 401 (417)
272 Q Consensus 322 ~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le 401 (417)
273 +.|.++|++|||||||||||+||.++|++||+++++++++++ ++++|+|||||+++++++|+.++++||||||||+||
274 T Consensus 301 ~~~~~~I~~aktI~wnGP~G~~E~e~f~~GT~~i~~ai~~~~--~a~~ivGGGdT~~~~~~~g~~~~~s~vSTGGGA~Le 378 (394)
275 T 3UWD_A 301 EIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALADAE--GTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLE 378 (394)
276 T ss_dssp HHHHHHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHCT--TCEEEECSHHHHHHHHHTTCGGGCSEECCCTHHHHH
277 T ss_pred HHHHHHHhcCCEEEEECCCCcccCCCcChHHHHHHHHHHHcC--CCeEEEechHHHHHHHHcCCCCcceEEEcccHHHHH
278 Confidence 999999999999999999999988889999999999997632 689999999999888888888889999999999999
279
280
281 Q NP_000282.1 402 LLEGKVLPGVDALSN 416 (417)
282 Q Consensus 402 ~L~G~~LPgl~aL~~ 416 (417)
283 ||+|++||||++|++
284 T Consensus 379 ~L~Gk~LPgl~aL~~ 393 (394)
285 T 3UWD_A 379 FMEGKELPGVVCLND 393 (394)
286 T ss_dssp HHTTCCCHHHHTSCB
287 T ss_pred HHcCCCCCchhhhcc
288 Confidence 999999999999985
289
290
291 No 5
292 >1QPG_A 3-PHOSPHOGLYCERATE KINASE, MAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE, 3-PHOSPHOGLYCERIC ACID; PHOSPHOTRANSFERASE (CARBOXYL ACCEPTOR), KINASE, GLYCOLYSIS; HET: 3PG, MAP; 2.4A {Saccharomyces cerevisiae} SCOP: c.86.1.1
293 Probab=100.00 E-value=7.2e-112 Score=861.28 Aligned_cols=413 Identities=66% Similarity=1.036 Sum_probs=363.5 Template_Neff=6.500
294
295 Q NP_000282.1 2 SLSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPV 81 (417)
296 Q Consensus 2 ~~~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~v 81 (417)
297 +..++++++|.|++|||||||+|+|||+++++|.|++||++++|||+||+++||++|||+||+|||+++. ++.+||+||
298 T Consensus 1 ~~~~~~~i~~~~l~gK~vlvRvD~NVPl~~~~i~dd~RI~~~lpTI~~Ll~~gak~vil~sHlGrP~g~~-~~~~Sl~pv 79 (415)
299 T 1QPG_A 1 SLSSKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQPNGER-NEKYSLAPV 79 (415)
300 T ss_dssp CTTSBCBGGGCCCTTCEEEEECCCCCCBSSSSBSCCHHHHHHHHHHHHHHTTCCSEEEEECCCSCCCSSC-CGGGCSHHH
301 T ss_pred CCcccccccccccCCCEEEEEEecCCccCCCccCCCHHHHHHHHHHHHHHHcCCCEEEEEeeCCCCCCCc-CcccchHHH
302 Confidence 3567889998999999999999999999888999999999999999999999994489999999998764 568999999
303
304
305 Q NP_000282.1 82 AVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVY 161 (417)
306 Q Consensus 82 a~~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~Diy 161 (417)
307 +++|+++|+.+|.|+++|+|+++.+.++.+++|+|+||||+|||++|+++.++ ++.+.+++.+++.+|+++||+++|+|
308 T Consensus 80 a~~L~~~l~~~v~f~~d~~g~~~~~~i~~~~~g~illLENlRF~~~E~~~~~~-n~~~~~~~~~~~~~fa~~LA~l~Diy 158 (415)
309 T 1QPG_A 80 AKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKV-DGQKVKASKEDVQKFRHELSSLADVY 158 (415)
310 T ss_dssp HHHHHHHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSHHHHTEEEE-TTEEEECCHHHHHHHHHHHHHTCSEE
311 T ss_pred HHHHHHHhCCeEEEccCCCCHHHHHHHHhCCCCCeEehhhhhhcchhcccccc-CCccccCCHHHHHHHHHHHHhcCCeE
312 Confidence 99999999877999999999888888899999999999999999877532000 00000111223478999999999999
313
314
315 Q NP_000282.1 162 VNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMA 241 (417)
316 Q Consensus 162 VNDAFg~aHR~~aS~~gi~l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a 241 (417)
317 ||||||++||.|||++++++|+++||++|++||++|++++++|+||+++|+||+|++||+++|++|+++||.|++||+||
318 T Consensus 159 VNDAF~~~HR~hAS~vgi~lp~s~aG~ll~kEl~~L~k~l~~p~rP~v~IlGGaKv~dKi~~i~~Ll~~~D~IligG~~a 238 (415)
319 T 1QPG_A 159 INDAFGTAHRAHSSMVGFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMA 238 (415)
320 T ss_dssp EECCGGGTTSCCHHHHCCCCSCEEECHHHHHHHHHHHHHHSSCCSSEEEEECSSCSGGGHHHHHHHTTTCSEEEECGGGH
321 T ss_pred eecccccCCcccccceecCCChhhhcHHHHHHHHHHHHHhhCCCCCEEEEEcCCCHHHHHHHHHHHHHhCCEEEECcHHH
322 Confidence 99999999999999999997658999999999999999999999999999999999999999999999899999999999
323
324
325 Q NP_000282.1 242 FTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESS 321 (417)
326 Q Consensus 242 ~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti 321 (417)
327 |+||+|++++++|+|++|++..+.|++++++|+.++++|+||+|++|.+.+..+.....+...+.+|++|+++||||+|+
328 T Consensus 239 ~tfL~a~~~~~iG~S~~e~~~~~~a~~il~~a~~~~~ki~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti 318 (415)
329 T 1QPG_A 239 FTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESR 318 (415)
330 T ss_dssp HHHHHHHSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEEECCSEEEEESSSSSSCCCCEEETTTCCCTTCEEEEECHHHH
331 T ss_pred HHHHHHhCCCcCCccccchhhhhHHHHHHHHHHHcCCeEEeeeeEEEecccCCCCCCceeeccCCCCCCCcccccCHHHH
332 Confidence 99999975558999999998889999999998899999999999999886532221111112237889999999999999
333
334
335 Q NP_000282.1 322 KKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLE 401 (417)
336 Q Consensus 322 ~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le 401 (417)
337 +.|.+.|++|||||||||||+||.++|++||+++++++++++++++++|+|||||+++++++|+.++++||||||||+||
338 T Consensus 319 ~~~~~~i~~aktI~wnGP~G~~E~~~f~~GT~~ia~~i~~~~~~~a~~ivGGGdT~~~~~~~g~~~~~s~vSTgGGA~L~ 398 (415)
339 T 1QPG_A 319 KLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLE 398 (415)
340 T ss_dssp HHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHTCEEEECCHHHHHHHHHTTCGGGSSEECCCTHHHHH
341 T ss_pred HHHHHHHHcCCEEEEcCCCChhcccccChHHHHHHHHHHHHhcCCCeEEEEehHHHHHHHHcCCCCccEEEEcCchHHHH
342 Confidence 99999999999999999999999888999999999999763224789999999999999888987889999999999999
343
344
345 Q NP_000282.1 402 LLEGKVLPGVDALSN 416 (417)
346 Q Consensus 402 ~L~G~~LPgl~aL~~ 416 (417)
347 ||+|+.||||++|++
348 T Consensus 399 ~L~G~~LPgieaL~~ 413 (415)
349 T 1QPG_A 399 LLEGKELPGVAFLSE 413 (415)
350 T ss_dssp HHTSCCCHHHHTSCB
351 T ss_pred HHcCCCCChHHHHhh
352 Confidence 999999999999975
353
354
355 No 6
356 >3PGK_A PHOSPHOGLYCERATE KINASE (E.C.2.7.2.3); PHOSPHOTRANSFERASE(CARBOXYL AS ACCEPTOR), TRANSFERASE; HET: ATP, 3PG; 2.5A {Saccharomyces cerevisiae} SCOP: c.86.1.1
357 Probab=100.00 E-value=7.8e-112 Score=861.30 Aligned_cols=413 Identities=64% Similarity=1.016 Sum_probs=363.8 Template_Neff=6.500
358
359 Q NP_000282.1 2 SLSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPV 81 (417)
360 Q Consensus 2 ~~~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~v 81 (417)
361 +..++++++|.|++|||||||+|+|||+++++|.|++||++++|||+||+++||++|||+||+|||+++. ++.+||+||
362 T Consensus 2 ~~~~~~~~~~~~l~gK~vlvRvD~NVPl~~~~i~dd~RI~~~lpTI~~Ll~~gak~vil~sHlGRP~g~~-~~~~Sl~pv 80 (416)
363 T 3PGK_A 2 SLSSKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGRPNGER-NEKYSLAPV 80 (416)
364 T ss_dssp CCCCSCCSSCCCCSSCCEEEECCCCCCCSSSCCSCCHHHHHHHHHHHHHHHHCCSCCEEECCCCCCCSSS-SCSCCSHHH
365 T ss_pred CCcccccccccccCCCEEEEEEecCCccCCCccCCCHHHHHHHHHHHHHHHcCCCEEEEEeecCCCCCCc-CcccChHHH
366 Confidence 5678899999999999999999999999888999999999999999999999994489999999998764 568999999
367
368
369 Q NP_000282.1 82 AVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVY 161 (417)
370 Q Consensus 82 a~~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~Diy 161 (417)
371 +++|+++|+.+|.|+++|+|+++.+.++.+++|+|+||||+|||++|+++.++ ++.+.+++.+++.+|++.||+++|+|
372 T Consensus 81 a~~L~~~l~~~v~f~~d~~g~~~~~~i~~~~~g~i~lLENlRF~~~E~~~~~~-n~~~~~~~~~~~~~fa~~La~l~diy 159 (416)
373 T 3PGK_A 81 AKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKV-DGQKVKASKEDVQKFRHELSSLADVY 159 (416)
374 T ss_dssp HHHHHHHHCSCEECCCSSCCHHHHHHHHHSSSCEEEECSSCSSCSSCCCCSSS-SSSSCCCCCHHHHHHHHHHHTSCSEE
375 T ss_pred HHHHHHHHCCeeEEcccCCCHHHHHHHHhCCCCCeEehhhhhhcchhcccccc-CCcccccCHHHHHHHHHHHHhcCCeE
376 Confidence 99999999877999999999888888899999999999999999877522000 00001111223477999999999999
377
378
379 Q NP_000282.1 162 VNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMA 241 (417)
380 Q Consensus 162 VNDAFg~aHR~~aS~~gi~l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a 241 (417)
381 ||||||++||.|||++++++|+++||++|++||++|.+++++|+||+++|+||+|++||+++|++|+++||.|++||+||
382 T Consensus 160 VNDAF~~~HR~hAS~vgi~lp~s~aG~ll~kEl~~L~k~l~~p~rP~v~IlGGaKv~dKi~~i~~Ll~~~D~iligG~~a 239 (416)
383 T 3PGK_A 160 INDAFGTAHRAHSSMVGFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMA 239 (416)
384 T ss_dssp EECSSCSSSSCCTTSSSCCSSCEEECHHHHHHHHHHHHHTSCCSSCBEEEECSSCCSTHHHHHHHHHSSSSCEEEECCHH
385 T ss_pred eecccccCCccccCccccCCchhhhcHHHHHHHHHHHHHhhCCCCCEEEEEcCCCHHHHHHHHHHHHHhCCEEEeCcHHH
386 Confidence 99999999999999999997658999999999999999999999999999999999999999999999899999999999
387
388
389 Q NP_000282.1 242 FTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESS 321 (417)
390 Q Consensus 242 ~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti 321 (417)
391 |+||+|++++++|+|++|++..+.|++++++|+.++++|+||+|++|.+.+........+...+.+|++|+++||||+|+
392 T Consensus 240 ~tfL~a~~~~~iG~s~~e~~~~~~a~~il~~a~~~~~kI~LP~D~vv~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti 319 (416)
393 T 3PGK_A 240 FTFKKVLENTEIGDSIFDKAVGPEIAKLMEKAKAKGVEVVLPVDFIIADAFSASANTKTVTDKEGIPAGWQGLDNGPESR 319 (416)
394 T ss_dssp HHHHHSSHHHHHHCSCSCTTHHHHHHHHHHHHHHHTCEECCCSEEEECSSSSSSSCEEEESSCCSSSCSSCCCSCCHHHH
395 T ss_pred HHHHHHhCCCccCcchhcccchHHHHHHHHHHHHcCCeEEccccEEEeccccccCCcceeecccCCCCCCccccCCHHHH
396 Confidence 99999975568999999998889999999988889999999999999886532221111112237888999999999999
397
398
399 Q NP_000282.1 322 KKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLE 401 (417)
400 Q Consensus 322 ~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le 401 (417)
401 +.|.+.|++|||||||||||+||.++|++||+++++++++++++++++|+|||||+++++++|+.++++||||||||+||
402 T Consensus 320 ~~~~~~i~~aktI~wnGP~G~~E~~~f~~GT~~ia~~i~~~~~~~a~~ivGGGdT~~~~~~~g~~~~~s~vSTGGGA~L~ 399 (416)
403 T 3PGK_A 320 KLFAATVAKATVILWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLE 399 (416)
404 T ss_dssp HHHHHHHSSCSBEEECSCSSCTTSTTSSSHHHHHHHHHHHHTTSSCCEEECSSHHHHHHHHHCCTTCCEECCCSHHHHHH
405 T ss_pred HHHHHHHHhCCEEEEeCCCChhhccccchHHHHHHHHHHHHccCCCeEEEEehhHHHHHHHcCCCCcceEEecChhHHHH
406 Confidence 99999999999999999999999888999999999999763224789999999999999888987889999999999999
407
408
409 Q NP_000282.1 402 LLEGKVLPGVDALSN 416 (417)
410 Q Consensus 402 ~L~G~~LPgl~aL~~ 416 (417)
411 ||+|+.||||++|++
412 T Consensus 400 ~L~Gk~LPgl~aL~~ 414 (416)
413 T 3PGK_A 400 LLEGKELPGVAFLSE 414 (416)
414 T ss_dssp HHHTCCCHHHHHCSS
415 T ss_pred HHcCCCCChHHHHhc
416 Confidence 999999999999975
417
418
419 No 7
420 >3Q3V_A Phosphoglycerate kinase (E.C.2.7.2.3); Structural Genomics, Center for Structural; HET: SO4, FMT, PGE; 2.145A {Campylobacter jejuni subsp. jejuni NCTC 11168}
421 Probab=100.00 E-value=3.2e-111 Score=852.34 Aligned_cols=392 Identities=45% Similarity=0.820 Sum_probs=356.7 Template_Neff=6.300
422
423 Q NP_000282.1 2 SLSNKLTLDKLDVKGKRVVMRVDFNVPMKN-NQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEP 80 (417)
424 Q Consensus 2 ~~~~~~~i~~~~l~gK~VlvRvD~NVPl~~-~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~ 80 (417)
425 +|+++++++|.|++|||||||+|+|||+++ ++|.|++||++++|||+||+++|| +|||+||+|||+++ ++.+||+|
426 T Consensus 3 ~~~~~~~l~~~~l~gK~vlvR~D~NVPi~~~~~i~dd~RI~~~lpTI~~Ll~~ga-~vil~sHlGrP~~~--~~~~Sl~~ 79 (403)
427 T 3Q3V_A 3 AMSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGC-SVILASHLGRPKEI--SSKYSLEP 79 (403)
428 T ss_dssp ---CBCBGGGSCCTTCEEEEECCCCCCBCTTCCBSCCHHHHHHHHHHHHHHHTTC-EEEEECCCSCCSSC--CGGGCSHH
429 T ss_pred cccccccccchhcCCCEEEEEeecCCCcccCCccCCChHHHHHHHHHHHHHHCCC-EEEEEecCCCCccc--CcccCHHH
430 Confidence 578899999889999999999999999975 489999999999999999999999 59999999999865 35899999
431
432
433 Q NP_000282.1 81 VAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDV 160 (417)
434 Q Consensus 81 va~~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~Di 160 (417)
435 |+++|+++|+.+|.|+++|+|+++.+.++.+++|+|+||||+|||++|+++ +.+|++.||+++|+
436 T Consensus 80 va~~L~~~l~~~V~f~~~~~g~~~~~~i~~~~~g~i~lLENlRF~~~E~~n---------------~~~fa~~La~l~Di 144 (403)
437 T 3Q3V_A 80 VAKRLARLLDKEIVMAKDVIGEDAKTKAMNLKAGEILLLENLRFEKGETKN---------------DENLAKELASMVQV 144 (403)
438 T ss_dssp HHHHHHHHHTSCCEECSSSSSHHHHHHHHHCCTTCEEECSCGGGSTTGGGT---------------CHHHHHHHHHTCSE
439 T ss_pred HHHHHHHHhCCeeeecCCCCCHHHHHHHHhccCCCEEEEcccccCCcccCC---------------CHHHHHHHHhhchH
440 Confidence 999999999877999999999888888889999999999999999876422 36799999999999
441
442
443 Q NP_000282.1 161 YVNDAFGTAHRAHSSMVGVN--LPQ--KAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMII 236 (417)
444 Q Consensus 161 yVNDAFg~aHR~~aS~~gi~--l~~--~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~ili 236 (417)
445 |||||||++||.|||+++++ +|+ ++||++|++||++|++++++|+||+++|+||+|++||+++|++|+++||.|+|
446 T Consensus 145 yVNDAF~~~HR~hAS~vgi~~~lp~~~s~aG~ll~kEl~~L~~~~~~p~rP~v~IlGGaKv~dKi~~i~~Ll~~~D~ili 224 (403)
447 T 3Q3V_A 145 YINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLII 224 (403)
448 T ss_dssp EEECCGGGTTSCCTTTTGGGGGSCTTSEEECHHHHHHHHHHHHHTTCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEE
449 T ss_pred HHhcccccccccCcchhHHHhhcccccccccHHHHHHHHHHHHHHhCCCCCEEEEECCCcHHHHHHHHHHHHHhCCEEEE
450 Confidence 99999999999999999998 663 79999999999999999999999999999999999999999999999999999
451
452
453 Q NP_000282.1 237 GGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDC 316 (417)
454 Q Consensus 237 gG~~a~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DI 316 (417)
455 ||+|||+||+|+ |+++|+|++|++..+.|++++++|++++++|++|+|++|.+++..++.. ...+...+|++|+++||
456 T Consensus 225 gG~~a~tfL~a~-g~~iG~s~~e~~~~~~a~~il~~a~~~~~kI~lP~D~vv~~~~~~~~~~-~~~~~~~i~~~~~~~DI 302 (403)
457 T 3Q3V_A 225 GGGMAFTFLKAL-GYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDVPM-KFVPAQEIPNGWMGLDI 302 (403)
458 T ss_dssp CSTTHHHHHHHT-TCCCTTSCCCGGGHHHHHHHHHHHHHTTCEEECCSEEEEESSSSTTSCC-EEEEGGGCCTTCEEEEE
459 T ss_pred cchHHHHHHHHc-CCCCccchhhHHHHHHHHHHHHHHHHhCCeeEeeccEEecCcCCCCCCc-eeechhhcCCCccCccC
460 Confidence 999999999998 8999999999999999999999998999999999999999865322211 11122478889999999
461
462
463 Q NP_000282.1 317 GPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGG 396 (417)
464 Q Consensus 317 Gp~Ti~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgG 396 (417)
465 ||+|++.|.+.|++|||||||||||+||+++|++||+++++++++. ++++|+|||||+++++++|+.++++||||||
466 T Consensus 303 Gp~Ti~~~~~~i~~aktI~wnGp~G~~E~e~f~~GT~~i~~~i~~~---~a~~ivGGGdT~~~~~~~g~~~~~~~vStGG 379 (403)
467 T 3Q3V_A 303 GPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEG---HATSVVGGGDTADVVARAGDADEMTFISTGG 379 (403)
468 T ss_dssp CHHHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHS---SSEEEEESHHHHHHHHHTTCGGGSSEECCCH
469 T ss_pred CHHHHHHHHHHHhhCCEEEEeCCCCcccccccchHHHHHHHHHHhC---CCeEEEeCHHHHHHHHHcCCCccccEEecch
470 Confidence 9999999999999999999999999999878999999999999762 6899999999999999889888899999999
471
472
473 Q NP_000282.1 397 GASLELLEGKVLPGVDALSN 416 (417)
474 Q Consensus 397 gA~Le~L~G~~LPgl~aL~~ 416 (417)
475 ||+||||+|++||||++|++
476 T Consensus 380 GA~Le~L~Gk~LPgi~aL~~ 399 (403)
477 T 3Q3V_A 380 GASLELIEGKELPGVKALRS 399 (403)
478 T ss_dssp HHHHHHHTTCCCHHHHTTBC
479 T ss_pred HHHHHHHcCCCCchHHHHhh
480 Confidence 99999999999999999975
481
482
483 No 8
484 >1PHP_A 3-PHOSPHOGLYCERATE KINASE (PGK) (E.C.2.7.2.3); KINASE; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1
485 Probab=100.00 E-value=1.1e-110 Score=847.59 Aligned_cols=387 Identities=48% Similarity=0.853 Sum_probs=355.2 Template_Neff=6.500
486
487 Q NP_000282.1 8 TLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAVELKS 87 (417)
488 Q Consensus 8 ~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va~~L~~ 87 (417)
489 +++|.|++|||||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++. .+.+||+||+++|++
490 T Consensus 5 ~l~~~~l~gK~vl~R~D~NVpi~~~~i~d~~RI~~~lpTI~~Ll~~ga-kvvl~sHlGrP~g~~-~~~~Sl~~va~~L~~ 82 (394)
491 T 1PHP_A 5 TIRDVDVRGKRVFCRVDFNVPMEQGAITDDTRIRAALPTIRYLIEHGA-KVILASHLGRPKGKV-VEELRLDAVAKRLGE 82 (394)
492 T ss_dssp BGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTC-EEEEECCCSCCCSSC-CGGGCSHHHHHHHHH
493 T ss_pred cccccccCCCEEEEEeecCCcccCCCCCCcHHHHHHHHHHHHHHHCCC-cEEEEeccCCCCCCc-chhhhHHHHHHHHHH
494 Confidence 777788999999999999999988899999999999999999999999 599999999998764 468999999999999
495
496
497 Q NP_000282.1 88 LLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFG 167 (417)
498 Q Consensus 88 ~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~DiyVNDAFg 167 (417)
499 +|+.+|.|+++|+|+++++.++.+++|+|+||||+|||++|+++ +.+|++.||+++|+|||||||
500 T Consensus 83 ~l~~~v~f~~~~~g~~~~~~i~~~~~g~illLENlRf~~~E~~n---------------~~~fa~~La~l~DiyVnDAF~ 147 (394)
501 T 1PHP_A 83 LLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRFYPGEEKN---------------DPELAKAFAELADLYVNDAFG 147 (394)
502 T ss_dssp HHTSCCEECSCSSSHHHHHHHHTCCTTCEEECCCGGGSHHHHHT---------------CHHHHHHHHTTCSEEEECCGG
503 T ss_pred HhCCCeeecCCCCCHHHHHHHHhccCCCEEEeecccCCCccccC---------------CHHHHHHHHHhccHHHccchh
504 Confidence 99877999999999888888899999999999999999866432 367999999999999999999
505
506
507 Q NP_000282.1 168 TAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFL 245 (417)
508 Q Consensus 168 ~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a~tfl 245 (417)
509 ++||.|||+++++ +| ++||++|++|+++|++++++|+||+++|+||+|++||+++|++|+++||.|++||+|||+||
510 T Consensus 148 ~~HR~hAS~vgi~~~lp-s~aG~ll~kEl~~L~~~l~~p~rP~v~IlGGaKv~dKi~~i~~ll~~~d~iligG~~a~tfL 226 (394)
511 T 1PHP_A 148 AAHRAHASTEGIAHYLP-AVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFV 226 (394)
512 T ss_dssp GTTSCCTTTTGGGGTSC-EEECHHHHHHHHHHHHHHHSCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTHHHHHH
513 T ss_pred HhccccchhhhHHhhhh-hhhcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHHHHhhcCeEEEcchHHHHHH
514 Confidence 9999999999999 67 89999999999999999999999999999999999999999999998999999999999999
515
516
517 Q NP_000282.1 246 KVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYA 325 (417)
518 Q Consensus 246 ~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~~~~ 325 (417)
519 +|+ |+++|+|++|++..+.|++++++|+.++++|++|+|++|.+.+..++.. ...+.+.+|++|+++||||+|++.|+
520 T Consensus 227 ~a~-g~~iG~s~~e~~~~~~a~~il~~a~~~~~ki~lP~D~vv~~~~~~~~~~-~~~~~~~i~~~~~~~DIGp~Ti~~~~ 304 (394)
521 T 1PHP_A 227 KAL-GHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANT-KVVPIDAIPADWSALDIGPKTRELYR 304 (394)
522 T ss_dssp HHT-TCCCTTSCCCGGGHHHHHHHHHHHHHHTCEEECCSEEEEESSSSTTSCE-EEEEGGGCCTTCEEEEECHHHHHHHH
523 T ss_pred HHh-CCCCCcccccHhHHHHHHHHHHHHHHcCCEEEceeeEEEeccccccCCc-eEeecCcCCCCcccccCCHHHHHHHH
524 Confidence 998 8999999999999999999999988899999999999998865322211 11122478899999999999999999
525
526
527 Q NP_000282.1 326 EAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEG 405 (417)
528 Q Consensus 326 ~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le~L~G 405 (417)
529 ++|++|||||||||||+||.++|++||+++++++++++ ++++|+|||||+++++++++.++++||||||||+||||+|
530 T Consensus 305 ~~i~~aktI~wnGP~G~~E~~~f~~GT~~i~~~i~~~~--~a~~viGGGdT~~~~~~~~~~~~~~~vStgGGA~Le~L~G 382 (394)
531 T 1PHP_A 305 DVIRESKLVVWNGPMGVFEMDAFAHGTKAIAEALAEAL--DTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEG 382 (394)
532 T ss_dssp HHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHCT--TCEEEECSHHHHHHHHHTTCGGGSSEECSCTHHHHHHHTT
533 T ss_pred HHHHhCCEEEEeCCCCccccchhchHHHHHHHHHHHhc--CCcEEEechHHHHHHHHcCCCccCeEEecchhHHHHHHcC
534 Confidence 99999999999999999998889999999999997632 7899999999998888888877899999999999999999
535
536
537 Q NP_000282.1 406 KVLPGVDALSN 416 (417)
538 Q Consensus 406 ~~LPgl~aL~~ 416 (417)
539 +.||||++|++
540 T Consensus 383 ~~LPgl~aL~~ 393 (394)
541 T 1PHP_A 383 KQLPGVVALED 393 (394)
542 T ss_dssp CCCHHHHTSCB
543 T ss_pred CCCChhHHhhc
544 Confidence 99999999975
545
546
547 No 9
548 >1VPE_A PHOSPHOGLYCERATE KINASE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER; TRANSFERASE, PHOSPHOGLYCERATE KINASE, THERMOTOGA MARITIMA; HET: 3PG, ANP; 2.0A {Thermotoga maritima} SCOP: c.86.1.1
549 Probab=100.00 E-value=1.1e-110 Score=848.42 Aligned_cols=392 Identities=49% Similarity=0.875 Sum_probs=356.6 Template_Neff=6.500
550
551 Q NP_000282.1 6 KLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAVEL 85 (417)
552 Q Consensus 6 ~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va~~L 85 (417)
553 |+++++.|++|||||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++. ++.+||+||+++|
554 T Consensus 2 ~~~l~~~~l~gK~vl~R~D~NVP~~~~~i~dd~Ri~~~lpTI~~Ll~~ga-~vil~sHlGrP~g~~-~~~~Sl~~v~~~L 79 (398)
555 T 1VPE_A 2 KMTIRDVDLKGKRVIMRVDFNVPVKDGVVQDDTRIRAALPTIKYALEQGA-KVILLSHLGRPKGEP-SPEFSLAPVAKRL 79 (398)
556 T ss_dssp BCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTC-EEEEECCCSCCCSSC-CGGGCSHHHHHHH
557 T ss_pred CccccccccCCCEEEEEeeCCcccCCCccCCcHHHHHHHHHHHHHHHCCC-cEEEEeccCCCCCCC-CcccCHHHHHHHH
558 Confidence 56777788999999999999999988899999999999999999999999 599999999998764 4689999999999
559
560
561 Q NP_000282.1 86 KSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDA 165 (417)
562 Q Consensus 86 ~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~DiyVNDA 165 (417)
563 +++|+.+|.|+++|+|+++.+.++.+++|+|+||||+|||++|+++ +.+|++.||+++|+|||||
564 T Consensus 80 ~~~l~~~V~f~~~~~g~~~~~~i~~~~~g~i~lLENlRf~~~E~~n---------------~~~fa~~La~l~DiyVnDA 144 (398)
565 T 1VPE_A 80 SELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKN---------------DPELAKFWASLADIHVNDA 144 (398)
566 T ss_dssp HHHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSTHHHHT---------------CHHHHHHHHTTCSEEEECC
567 T ss_pred HHHhCCceeecCCccCHHHHHHHHHhhCCCEEEeeccccCCccccC---------------CHHHHHHHHhcccceeecc
568 Confidence 9999877999999999888888889999999999999999876422 3679999999999999999
569
570
571 Q NP_000282.1 166 FGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFT 243 (417)
572 Q Consensus 166 Fg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a~t 243 (417)
573 |+++||.|||+++++ +| ++||++|++|+++|.+++++|+||+++|+||+|++||+++|++|++++|.|++||+||++
574 T Consensus 145 F~~~HR~~aS~vgi~~~lp-s~aG~l~~kEl~~L~~~~~~p~~P~v~IlGGaKv~dKi~~i~~ll~k~d~iligG~la~t 223 (398)
575 T 1VPE_A 145 FGTAHRAHASNVGIAQFIP-SVAGFLMEKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFT 223 (398)
576 T ss_dssp GGGTTSCCTTTTGGGGTSC-EEECHHHHHHHHHHHHHHHCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTTHHH
577 T ss_pred hhcCCCCcccchHHHhhch-HhhHHHHHHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHHHHHHCCEEEECchHHHH
578 Confidence 999999999999998 66 899999999999999999999999999999999999999999999988999999999999
579
580
581 Q NP_000282.1 244 FLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKK 323 (417)
582 Q Consensus 244 fl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~~ 323 (417)
583 ||+|+ |+++|+|++|++..+.|++++++|++++++|+||+|++|.+++..+.....+...+.+|++|+++||||+|++.
584 T Consensus 224 fl~a~-g~~vG~S~~e~~~~~~a~~il~~a~~~~~kI~lP~D~vv~~~~~~~~~~~~~~~~~~ip~~~~i~DIGp~Ti~~ 302 (398)
585 T 1VPE_A 224 FLKAL-GKEVGSSRVEEDKIDLAKELVEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIEL 302 (398)
586 T ss_dssp HHHHT-SCCCTTSCCCGGGHHHHHHHHHHHHHTTCEEECCSEEEEESSCSTTCCCEEEETTTCCCTTCEEEEECHHHHHH
587 T ss_pred HHHHh-CCCccCCcccHHHHHHHHHHHHHHHHcCCEEEceeeeEeccCCCCCCcceEEecccCCCCCcccCCCCHHHHHH
588 Confidence 99998 88999999999999999999999989999999999999998653322111111123788899999999999999
589
590
591 Q NP_000282.1 324 YAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELL 403 (417)
592 Q Consensus 324 ~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le~L 403 (417)
593 |.++|++|||||||||||+||+++|++||+++++++++++++++++|+|||||+++++++|+.++++||||||||+||||
594 T Consensus 303 ~~~~I~~aktI~wnGP~G~~E~e~f~~GT~~i~~ai~~~~~~~a~sivGGGdT~~~~~~~g~~~~~s~vStgGGA~Le~L 382 (398)
595 T 1VPE_A 303 FKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFL 382 (398)
596 T ss_dssp HHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEEESHHHHHHHHHTTCGGGSSEEESCHHHHHHHH
597 T ss_pred HHHHHhcCCEEEEeCCCCcccCcccchhHHHHHHHHHHhhhCCcEEEEcchHHHHHHHHcCCCCcceEEEcchHHHHHHH
598 Confidence 99999999999999999999887899999999999976322478999999999998888888788999999999999999
599
600
601 Q NP_000282.1 404 EGKVLPGVDALSN 416 (417)
602 Q Consensus 404 ~G~~LPgl~aL~~ 416 (417)
603 +|++||||++|++
604 T Consensus 383 ~G~~LPgl~aL~~ 395 (398)
605 T 1VPE_A 383 EGKELPGIASMRI 395 (398)
606 T ss_dssp TSSCCHHHHTSCB
607 T ss_pred cCCCCCcHHHhhh
608 Confidence 9999999999975
609
610
611 No 10
612 >4FEY_A Phosphoglycerate kinase (E.C.2.7.2.3); Structural Genomics, NIAID, National Institute; HET: ADP; 2.3A {Francisella tularensis subsp. tularensis}
613 Probab=100.00 E-value=5.5e-110 Score=841.97 Aligned_cols=388 Identities=44% Similarity=0.740 Sum_probs=352.5 Template_Neff=6.400
614
615 Q NP_000282.1 2 SLSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPV 81 (417)
616 Q Consensus 2 ~~~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~v 81 (417)
617 .||++++++|.|++||+||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++..++.+||+||
618 T Consensus 2 ~~~~~~~l~~~~l~gK~vl~RvD~NVPl~~~~i~dd~RI~~~lpTI~~Ll~~ga-~vvl~sHlGrP~~~~~~~~~Sl~pv 80 (395)
619 T 4FEY_A 2 NAMSFLTLKDVDLKDKKVLVRVDFNVPVKDGKVTSKVRIEAAIPTIQYILDQGG-AVILMSHLGRPTEGEYDSQFSLEPV 80 (395)
620 T ss_dssp --CCSCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHTHHHHHHHHHHTC-EEEEECCCSCCCTTSCCGGGCSHHH
621 T ss_pred CcccccccccccCCCCEEEEEeeCCCcccCCccCCcHHHHHHHHHHHHHHHCCC-EEEEEeecCCCCCCCCCcccCHHHH
622 Confidence 478899999999999999999999999988899999999999999999999999 5999999999987522458999999
623
624
625 Q NP_000282.1 82 AVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVY 161 (417)
626 Q Consensus 82 a~~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~Diy 161 (417)
627 +++|+++|+.+|.|+++|++. .++++|+|+||||+|||++|+++ +.+|+++||+++|+|
628 T Consensus 81 a~~L~~~l~~~v~f~~d~~~~------~~~~~g~illLENlRf~~~E~~~---------------~~~fa~~La~l~Diy 139 (395)
629 T 4FEY_A 81 AKALSEIINKPVKFAKDWLDG------VDVKAGEIVMCENVRFNSGEKKS---------------TDDLSKKIASLGDVF 139 (395)
630 T ss_dssp HHHHHHHHCSCEEEESSTTTC------CCCCTTCEEEECCGGGSTTTTTT---------------CHHHHHHHHHTCSEE
631 T ss_pred HHHHHHHhCCceeecccccCC------CCCCCCeEEEEecccccCcccCC---------------chHHHHHHHhcchHh
632 Confidence 999999998779999999884 27889999999999999876421 367999999999999
633
634
635 Q NP_000282.1 162 VNDAFGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGG 239 (417)
636 Q Consensus 162 VNDAFg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~ 239 (417)
637 |||||+++||.|||+++++ +|+++||++|++|+++|++++++|+||+++|+||+|++||+++|++|+++||.|++||+
638 T Consensus 140 VnDAF~~~HR~~aS~vgi~~~lp~s~aG~l~~kEl~~L~~~~~~p~~P~v~IlGGaKv~dKi~~i~~Ll~~~d~iligG~ 219 (395)
639 T 4FEY_A 140 VMDAFATAHRAQASTYGVAKYIPVACAGILLTNEIQALEKALKSPKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGG 219 (395)
640 T ss_dssp EECCGGGTTSCCCCCCCHHHHSSEEEECHHHHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHHHTTTCSEEEEEEH
641 T ss_pred hhhcHhHcchhccccccccccCCcchHhHHHHHHHHHHHHHHhCCCCCeEEEECCCcHHHHHHHHHHHHHhCCEEEeccH
642 Confidence 9999999999999999998 66689999999999999999999999999999999999999999999999999999999
643
644
645 Q NP_000282.1 240 MAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPE 319 (417)
646 Q Consensus 240 ~a~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~ 319 (417)
647 ||++||+|+ |+++|+|++|++..+.|++++++|+.++++|++|+|++|.+++..+.... ......+|++|+++||||+
648 T Consensus 220 ~a~tfl~a~-g~~vg~s~~e~~~~~~a~~il~~a~~~~~ki~lP~D~~v~~~~~~~~~~~-~~~~~~ip~~~~~~DIGp~ 297 (395)
649 T 4FEY_A 220 IANTFIKAE-GFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAI-IKKVSDVVADEMILDIGPE 297 (395)
650 T ss_dssp HHHHHHHHT-TCCCTTCCCCGGGHHHHHHHHHHHHHTTCBCCCCSEEEEESSSSTTCCCE-EEEGGGCCTTCEEEEECHH
651 T ss_pred HHHHHHHHc-CCccCCcccchhHHHHHHHHHHHHHHhCCceeeeeeEEecccccccccce-EeeHHHCCCCcEeccCCHH
652 Confidence 999999998 88999999999889999999999999999999999999998754322211 1112478899999999999
653
654
655 Q NP_000282.1 320 SSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGAS 399 (417)
656 Q Consensus 320 Ti~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~ 399 (417)
657 |++.|.+.|++|||||||||||+||.++|++||+++++++++. ++++|+|||||+++++++|+.++++||||||||+
658 T Consensus 298 Ti~~~~~~i~~aktI~wnGP~G~~E~~~f~~GT~~i~~aia~~---~a~~ivGGGdT~~~~~~~g~~~~~s~vStgGGA~ 374 (395)
659 T 4FEY_A 298 SQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQS---HAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAF 374 (395)
660 T ss_dssp HHHHHHHHHHHCSEEEEECCSSCTTSGGGCHHHHHHHHHHHHH---CSEEEEESHHHHHHHHHTTCSTTSSEEECCSHHH
661 T ss_pred HHHHHHHHHHhCCEEEEcCCCCcccccccChHHHHHHHHHHhC---CCcEEEechHHHHHHHHcCCCcCcEEEEcchHHH
662 Confidence 9999999999999999999999998888999999999999762 6899999999998888889888999999999999
663
664
665 Q NP_000282.1 400 LELLEGKVLPGVDALSN 416 (417)
666 Q Consensus 400 Le~L~G~~LPgl~aL~~ 416 (417)
667 ||||+|+.||||++|++
668 T Consensus 375 Le~L~G~~LPgleaL~~ 391 (395)
669 T 4FEY_A 375 LEFLEGKKLPAIEILKE 391 (395)
670 T ss_dssp HHHHTTCCCHHHHHHHH
671 T ss_pred HHHHcCCCCchHHHHHH
672 Confidence 99999999999999975
673
674
675 No 11
676 >1V6S_B Phosphoglycerate kinase (E.C.2.7.2.3); phosphoglycerate kinase, Thermus thermophilus, RIKEN; HET: GOL; 1.5A {Thermus thermophilus} SCOP: c.86.1.1
677 Probab=100.00 E-value=1.2e-109 Score=838.81 Aligned_cols=386 Identities=44% Similarity=0.774 Sum_probs=350.7 Template_Neff=6.500
678
679 Q NP_000282.1 7 LTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAVELK 86 (417)
680 Q Consensus 7 ~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va~~L~ 86 (417)
681 ++++|.|++|||||||+|+|||+++++|.|++||++++|||+||++ ++++|||+||+|||+++ ++.+||+||+++|+
682 T Consensus 2 ~~l~d~~l~gK~vl~R~D~NVPi~~~~i~d~~RI~~~lpTI~~Ll~-~~~~vvl~sHlGrP~~~--~~~~Sl~pva~~L~ 78 (390)
683 T 1V6S_B 2 RTLLDLDPKGKRVLVRVDYNVPVQDGKVQDETRILESLPTLRHLLA-GGASLVLLSHLGRPKGP--DPKYSLAPVGEALR 78 (390)
684 T ss_dssp CBGGGCCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHH-TTCEEEEECCCSCCSSC--CGGGCSHHHHHHHH
685 T ss_pred CCccccCCCCCEEEEEeeccccccCCccCCcHHHHhHHHHHHHHHh-CCCeEEEEeccCCCCCC--CcccchHHHHHHHH
686 Confidence 5677788999999999999999998899999999999999999999 54359999999999865 35799999999999
687
688
689 Q NP_000282.1 87 SLLGKDVLFLKDCVG-PEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDA 165 (417)
690 Q Consensus 87 ~~l~~~v~f~~~~~~-~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~DiyVNDA 165 (417)
691 ++|+. |.|++++++ +++.+.++.+++|+|+||||+|||++|+++ +.+|+++||+++|+|||||
692 T Consensus 79 ~~l~~-v~f~~~~~~~~~~~~~i~~~~~g~i~lLENlRf~~~E~~n---------------~~~fa~~La~l~DiyVNDA 142 (390)
693 T 1V6S_B 79 AHLPE-ARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGEEKN---------------DPELSARYARLGEAFVLDA 142 (390)
694 T ss_dssp TTCTT-EEECCSCTTSHHHHHHHHTCCTTCEEECCCGGGSTTTTTT---------------CHHHHHHHGGGCSEEEECC
695 T ss_pred HHCCC-cEeCCCCCCcHHHHHHHHHcCCCCEEEEeccCCCCCcccC---------------CHHHHHHHHhhcceEeeec
696 Confidence 99986 899998888 677778889999999999999999866422 3679999999999999999
697
698
699 Q NP_000282.1 166 FGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFT 243 (417)
700 Q Consensus 166 Fg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a~t 243 (417)
701 ||++||.|||+++++ +| ++||++|++|+++|++++++|+||+++|+||+|++||+++|++|++++|.|++||+|||+
702 T Consensus 143 F~~~HR~hAS~vgi~~~lp-s~aG~ll~kEl~~L~~~l~~p~~P~v~IlGGaKv~dKi~~i~~Ll~~~D~IligG~~a~t 221 (390)
703 T 1V6S_B 143 FGSAHRAHASVVGVARLLP-AYAGFLMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFT 221 (390)
704 T ss_dssp GGGTTSCCCCCCCGGGTSC-EEECHHHHHHHHHHHHTTSCCCSSEEEEECCSCGGGTHHHHHHHGGGCSEEEECSTHHHH
705 T ss_pred hhhcCcccchhhHHHhhHH-hhccHHHHHHHHHHHHHHcCCCCCEEEEEcCCCHHHHHHHHHHHHHHCCEEEEcchHHHH
706 Confidence 999999999999999 67 899999999999999999999999999999999999999999999988999999999999
707
708
709 Q NP_000282.1 244 FLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKK 323 (417)
710 Q Consensus 244 fl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~~ 323 (417)
711 ||+|+ |+++|+|++|++..+.|++++++|+.++++|++|+|++|.+.+...... ...+...+|++|+++||||+|++.
712 T Consensus 222 fL~a~-g~~ig~s~~e~~~~~~a~~il~~a~~~~~ki~lP~D~vv~~~~~~~~~~-~~~~~~~ip~~~~~~DIGp~Ti~~ 299 (390)
713 T 1V6S_B 222 FLKAL-GGEVGRSLVEEDRLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVET-RVFPARAIPVPYMGLDIGPKTREA 299 (390)
714 T ss_dssp HHHHT-TCBCTTCCCCGGGHHHHHHHHHHHHHTTCEEECCSEEEEESSCCTTCCC-EEEETTBCCTTCEEEEECHHHHHH
715 T ss_pred HHHHc-CCCccccccchhHHHHHHHHHHHHHHhCCeEEceeceeeccccccCCce-EEecCccCCCCcccccCCHHHHHH
716 Confidence 99998 8899999999999999999999888899999999999998865322111 112224788899999999999999
717
718
719 Q NP_000282.1 324 YAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELL 403 (417)
720 Q Consensus 324 ~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le~L 403 (417)
721 |+++|++|||||||||||+||+++|++||+++++++++++ ++++|+|||||+++++++|+.++++||||||||+||||
722 T Consensus 300 ~~~~i~~aktI~wnGp~G~~E~~~f~~GT~~i~~~i~~~~--~a~~iiGGGdT~~~~~~~g~~~~~~~vStgGGA~L~~L 377 (390)
723 T 1V6S_B 300 FARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAALE--GAFTVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFL 377 (390)
724 T ss_dssp HHHHHTTCSEEEEESCSSCTTSTTTTHHHHHHHHHHHHCS--SCEEEEESHHHHHHHHHTTCGGGSSEECCSSSCHHHHH
725 T ss_pred HHHHHhcCCEEEEeCCCcccCCCCcchHHHHHHHHHHHcc--CCEEEEeCHHHHHHHHHcCCCCcceEEecchHHHHHHH
726 Confidence 9999999999999999999988889999999999997632 78999999999999999898889999999999999999
727
728
729 Q NP_000282.1 404 EGKVLPGVDALSN 416 (417)
730 Q Consensus 404 ~G~~LPgl~aL~~ 416 (417)
731 +|+.||||++|++
732 T Consensus 378 ~g~~LPgl~aL~~ 390 (390)
733 T 1V6S_B 378 EKGTLPGLEVLEG 390 (390)
734 T ss_dssp HHSCCHHHHTTCC
735 T ss_pred hcCCCCcchhccC
736 Confidence 9999999999974
737
738
739 No 12
740 >3ZLB_A PHOSPHOGLYCERATE KINASE (E.C.2.7.2.3); TRANSFERASE; HET: ANP, GOL; 1.78A {STREPTOCOCCUS PNEUMONIAE}
741 Probab=100.00 E-value=1.6e-109 Score=839.96 Aligned_cols=394 Identities=46% Similarity=0.789 Sum_probs=353.2 Template_Neff=6.500
742
743 Q NP_000282.1 4 SNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAV 83 (417)
744 Q Consensus 4 ~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va~ 83 (417)
745 |++++++|.|++|||||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++..++.+||+||++
746 T Consensus 1 ~~~~~l~~~~l~gK~vlvR~D~NVPi~~~~i~dd~RI~~~lpTI~~Ll~~ga-kvil~sHlGRP~g~~~~~~~Sl~pva~ 79 (398)
747 T 3ZLB_A 1 MAKLTVKDVDLKGKKVLVRVDFNVPLKDGVITNDNRITAALPTIKYIIEQGG-RAILFSHLGRVKEESDKAGKSLAPVAA 79 (398)
748 T ss_dssp CCBCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTC-EEEEECCCSCCCSGGGSTTCCSHHHHH
749 T ss_pred CCccccccccCCCCEEEEEeeCCCccCCCCcCCChHHHHHHHHHHHHHHCCC-eEEEEeecCccCCcccccCcchHHHHH
750 Confidence 4677888888999999999999999998899999999999999999999999 599999999998753134799999999
751
752
753 Q NP_000282.1 84 ELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGD-VYV 162 (417)
754 Q Consensus 84 ~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~D-iyV 162 (417)
755 +|+++|+.+|.|+++|+|+++++.++.+++|+|+||||+|||++|... +. .++.+|+++||+++| +||
756 T Consensus 80 ~L~~~l~~~v~f~~~~~g~~~~~~i~~~~~g~i~lLENlRf~~~E~~~-e~----------~n~~~fa~~La~l~d~iyV 148 (398)
757 T 3ZLB_A 80 DLAAKLGQDVVFPGVTRGAELEAAINALEDGQVLLVENTRYEDVDGKK-ES----------KNDPELGKYWASLGDGIFV 148 (398)
758 T ss_dssp HHHHHHTSCEECCSCSSSHHHHHHHHTCCTTCEEECCCGGGGGTTTCT-TT----------TTCHHHHHHHHHTSSSEEE
759 T ss_pred HHHHHhCCceeCCCCCCCHHHHHHHHhccCCCEEEEecccccCCCCCc-cc----------cccHHHHHHHHhcCCcEEE
760 Confidence 999999877999999999888888899999999999999999865211 10 114789999999988 999
761
762
763 Q NP_000282.1 163 NDAFGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGM 240 (417)
764 Q Consensus 163 NDAFg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~ 240 (417)
765 ||||+++||.|||+++++ +|+++||++|++||++|++++++|+||+++|+||+|++||+++|++|++++|.|++||+|
766 T Consensus 149 NDAF~~~HR~hAS~vgi~~~lp~s~aG~ll~kEl~~L~~~l~~p~rP~v~IlGGaKv~dKi~~i~~Ll~~~D~iligG~~ 228 (398)
767 T 3ZLB_A 149 NDAFGTAHRAHASNVGISANVEKAVAGFLLENEIAYIQEAVETPERPFVAILGGSKVSDKIGVIENLLEKADKVLIGGGM 228 (398)
768 T ss_dssp ECCGGGTTSCCCCCCCHHTTSSEEEECHHHHHHHCCCCCHHHSCCSSEEEEECSSCSTTTHHHHHHHHHHCSEEEECTTH
769 T ss_pred ecchhhcccccchhhhhhHhhchHhHHHHHHHHHHHHHHHHHCCCCCEEEEEcCCCHHHHHHHHHHHHHHhCceEeCchH
770 Confidence 999999999999999999 666899999999999999999999999999999999999999999999988999999999
771
772
773 Q NP_000282.1 241 AFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPES 320 (417)
774 Q Consensus 241 a~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~T 320 (417)
775 ||+||+|+ |+++|+|++|++..+.|++++++ ++++|++|+|++|.+.+...... ...+...+|++|+++||||+|
776 T Consensus 229 a~tfL~a~-g~~ig~S~~e~~~~~~a~~ll~~---~~~ki~lP~D~vv~~~~~~~~~~-~~~~~~~i~~~~~~~DIGp~T 303 (398)
777 T 3ZLB_A 229 TYTFYKAQ-GIEIGNSLVEEDKLDVAKALLEK---ANGKLILPVDSKEANAFAGYTEV-RDTEGEAVSEGFLGLDIGPKS 303 (398)
778 T ss_dssp HHHHHHHT-TCCCTTCCCCGGGHHHHHHHHHH---STTCEECCSCEEEESSSSSCSCE-EECSSSCCCTTCEEEEECHHH
779 T ss_pred HHHHHHHc-CCcccCcccccchHHHHHHHHHH---cCCceEeeccchhhhcccCCCce-eeeccccccCCCeeecCCHHH
780 Confidence 99999998 88999999999888999999875 47899999999998864332111 111124788899999999999
781
782
783 Q NP_000282.1 321 SKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASL 400 (417)
784 Q Consensus 321 i~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~L 400 (417)
785 ++.|.+.|++|||||||||||+||.++|++||+++++++++++ ++++|+|||||+++++++|+.++|+||||||||+|
786 T Consensus 304 i~~~~~~I~~aktI~wnGP~G~~E~~~f~~GT~~i~~~i~~~~--~a~~iiGGGdT~~~~~~~g~~~~~s~vStgGGA~L 381 (398)
787 T 3ZLB_A 304 IAKFDEALTGAKTVVWNGPMGVFENPDFQAGTIGVMDAIVKQP--GVKSIIGGGDSAAAAINLGRADKFSWISTGGGASM 381 (398)
788 T ss_dssp HHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHTST--TCEEEECCHHHHHHHHHTTCGGGSSEECCCTHHHH
789 T ss_pred HHHHHHHHhcCCEEEEeCCCCccCCccccchHHHHHHHHHcCC--CCcEEEecccHHHHHHHcCCCCCCeEEEcchHHHH
790 Confidence 9999999999999999999999998889999999999997632 78999999999988888888778999999999999
791
792
793 Q NP_000282.1 401 ELLEGKVLPGVDALSN 416 (417)
794 Q Consensus 401 e~L~G~~LPgl~aL~~ 416 (417)
795 |||+|+.||||++|++
796 T Consensus 382 e~L~G~~LPgl~aL~~ 397 (398)
797 T 3ZLB_A 382 ELLEGKVLPGLAALTE 397 (398)
798 T ss_dssp HHHTTCCCHHHHTSCB
799 T ss_pred HHHcCCCCchHHHhhc
800 Confidence 9999999999999975
801
802
803 No 13
804 >4EHJ_A Phosphoglycerate kinase (E.C.2.7.2.3); Structural Genomics, Center for Structural; HET: MSE; 2.71A {Francisella tularensis subsp. tularensis}
805 Probab=100.00 E-value=2e-109 Score=837.07 Aligned_cols=386 Identities=44% Similarity=0.744 Sum_probs=350.7 Template_Neff=6.400
806
807 Q NP_000282.1 4 SNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAV 83 (417)
808 Q Consensus 4 ~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va~ 83 (417)
809 |++++++|.|++||+||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++..++.+||+||++
810 T Consensus 1 ~~~~~l~~~~l~gK~vl~R~D~NVpl~~~~i~dd~RI~~~lpTI~~Ll~~ga-~vvl~sHlGrP~~~~~~~~~Sl~pva~ 79 (392)
811 T 4EHJ_A 1 MSFLTLKDVDLKDKKVLVRVDFNVPVKDGKVTSKVRIEAAIPTIQYILDQGG-AVILMSHLGRPTEGEYDSQFSLEPVAK 79 (392)
812 T ss_dssp -CCCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTC-EEEEECCCSCCCTTCCCGGGCSHHHHH
813 T ss_pred CCccccccccCCCCEEEEEeeCCCcccCCccCCcHHHHHHHHHHHHHHHCCC-eEEEEeecCCCCCCCCCcccCHHHHHH
814 Confidence 4578888888999999999999999988899999999999999999999999 699999999998752245899999999
815
816
817 Q NP_000282.1 84 ELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVN 163 (417)
818 Q Consensus 84 ~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~DiyVN 163 (417)
819 +|+++|+.+|.|+++|++. .++++|+|+||||+|||++|+++ +.+|+++||+++|+|||
820 T Consensus 80 ~L~~~l~~~v~f~~d~~~~------~~~~~g~illLENlRf~~~E~~~---------------~~~fa~~La~~~DiyVn 138 (392)
821 T 4EHJ_A 80 ALSEIINKPVKFAKDWLDG------VDVKAGEIVMCENVRFNSGEKKS---------------TDDLSKKIASLGDVFVM 138 (392)
822 T ss_dssp HHHHHHTSCEEEETTCTTC------CCCCTTCEEEECCGGGSTTTTTT---------------CHHHHHHHHHTCSEEEE
823 T ss_pred HHHHHhCCceeecccccCC------CCCCCCeEEEEecccccCcccCC---------------chHHHHHHHhcchHhhh
824 Confidence 9999998779999999885 27889999999999999876421 36799999999999999
825
826
827 Q NP_000282.1 164 DAFGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMA 241 (417)
828 Q Consensus 164 DAFg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a 241 (417)
829 |||+++||.|||+++++ +|+++||++|++|+++|++++++|+||+++|+||+|++||+++|++|+++||.|++||+||
830 T Consensus 139 DAF~~~HR~~aS~vgi~~~lp~s~aG~l~~kEl~~L~~~~~~p~~P~v~IiGGaKv~dKi~~i~~Ll~~~D~IligG~~a 218 (392)
831 T 4EHJ_A 139 DAFATAHRAQASTYGVAKYIPVACAGILLTNEIQALEKALKSPKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIA 218 (392)
832 T ss_dssp CCGGGTTSCCCCCCCHHHHSSEEEECHHHHHHHHHHHHHHTSCCSSEEEEEECSCHHHHHHHHHHHTTTCSEEEEETHHH
833 T ss_pred hcHhHccccccccccccccCCcchHhHHHHHHHHHHHHHHhCCCCCEEEEECCCcHHHHHHHHHHHHHhCCEEEeccHHH
834 Confidence 99999999999999999 6668999999999999999999999999999999999999999999999999999999999
835
836
837 Q NP_000282.1 242 FTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESS 321 (417)
838 Q Consensus 242 ~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti 321 (417)
839 ++||+|+ |+++|+|++|++..+.|++++++|+.++++|++|+|++|.+++..+.... ......+|++|+++||||+|+
840 T Consensus 219 ~tfl~a~-g~~vg~s~~e~~~~~~a~~il~~a~~~~~kI~lP~D~~v~~~~~~~~~~~-~~~~~~i~~~~~~~DIGp~T~ 296 (392)
841 T 4EHJ_A 219 NTFIKAE-GFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAI-IKKVSDVVADEMILDIGPESQ 296 (392)
842 T ss_dssp HHHHHHT-TCCCTTCSCCGGGHHHHHHHHHHHHHHTCBCCCCSEEEEESSCSTTCCCE-EEEGGGCCTTCEEEEECHHHH
843 T ss_pred HHHHHHc-CCccCCcccchhHHHHHHHHHHHHHHhCCceeeeeeEEecccccccccce-EeeHHHCCCCcEeccCCHHHH
844 Confidence 9999998 88999999999888999999999988999999999999998754322211 111247888999999999999
845
846
847 Q NP_000282.1 322 KKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLE 401 (417)
848 Q Consensus 322 ~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le 401 (417)
849 +.|++.|++|||||||||||+||.++|++||+++++++++. ++++|+|||||+++++++|+.++++||||||||+||
850 T Consensus 297 ~~~~~~i~~aktI~wnGp~G~~E~~~f~~GT~~i~~ai~~~---~a~~vvGGGdT~~~~~~~g~~~~~~~vStgGGA~Le 373 (392)
851 T 4EHJ_A 297 KIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQS---HAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLE 373 (392)
852 T ss_dssp HHHHHHHHHCSEEEEECCSSCTTSGGGCHHHHHHHHHHHHC---CSEEEECSHHHHHHHHHHTCGGGSSEECCCSHHHHH
853 T ss_pred HHHHHHHHhCCEEEEcCCCCcccccccChHHHHHHHHHHhC---CCcEEEechHHHHHHHHcCCCcCcEEEEcchHHHHH
854 Confidence 99999999999999999999998888999999999999762 689999999999888888988899999999999999
855
856
857 Q NP_000282.1 402 LLEGKVLPGVDALSN 416 (417)
858 Q Consensus 402 ~L~G~~LPgl~aL~~ 416 (417)
859 ||+|+.||||++|++
860 T Consensus 374 ~L~G~~LPgl~aL~~ 388 (392)
861 T 4EHJ_A 374 FLEGKKLPAIEILKE 388 (392)
862 T ss_dssp HHTTCCCHHHHHHHH
863 T ss_pred HHcCCCCchHHHHHH
864 Confidence 999999999999975
865
866
867 No 14
868 >16PK_A 3-PHOSPHOGLYCERATE KINASE, 1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE; KINASE, PHOSPHOGLYCERATE, TERNARY COMPLEX, GLYCOLYSIS; HET: EPE, BIS; 1.6A {Trypanosoma brucei} SCOP: c.86.1.1
869 Probab=100.00 E-value=4.2e-109 Score=840.30 Aligned_cols=395 Identities=47% Similarity=0.803 Sum_probs=351.6 Template_Neff=6.400
870
871 Q NP_000282.1 6 KLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPM------------- 72 (417)
872 Q Consensus 6 ~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~------------- 72 (417)
873 ++++++.|++|||||||+|+|||+++++|.|++||++++|||+||++ +|++|||+||+|||+++..
874 T Consensus 2 ~~~l~~~~l~gK~vlvR~D~NVPl~~~~i~dd~RI~~~lpTI~~Ll~-~~~kvil~sHlGRP~g~~~~~~~~~~~~~~~~ 80 (415)
875 T 16PK_A 2 KKSINECDLKGKKVLIRVDFNVPVKNGKITNDYRIRSALPTLKKVLT-EGGSCVLMSHLGRPKGIPMAQAGKIRSTGGVP 80 (415)
876 T ss_dssp BCBGGGSCCTTCEEEEEECCCCCEETTEESCCHHHHHHHHHHHHHHH-TTCEEEEECCCSCCCCBCGGGHHHHHHTTCCT
877 T ss_pred CCccchhhcCCCEEEEEeeCCCcccCCccCCcHHHHHHHHHHHHHHH-cCCeEEEEeecCCCCCCChhhccccccCCCCC
878 Confidence 56777788999999999999999987899999999999999999999 5545999999999986320
879
880
881 Q NP_000282.1 73 --PDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAF 150 (417)
882 Q Consensus 73 --~~~~Sl~~va~~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~f 150 (417)
883 .+.+||+||+++|+++|+.+|.|+++|+| +.+.++.+++|+|+||||+|||++|++++ + +++.+|
884 T Consensus 81 ~~~~~~Sl~pva~~L~~~l~~~V~f~~~~~~--~~~~i~~~~~g~i~lLENlRF~~~E~~~~-~----------~~~~~f 147 (415)
885 T 16PK_A 81 GFQQKATLKPVAKRLSELLLRPVTFAPDCLN--AADVVSKMSPGDVVLLENVRFYKEEGSKK-A----------KDREAM 147 (415)
886 T ss_dssp TCCGGGCSHHHHHHHHHHHTSCCEEESCTTS--CHHHHHTCCTTCEEEECCGGGBGGGGCSS-H----------HHHHHH
887 T ss_pred CcchhccHHHHHHHHHHHhCCcceeCCCcCC--HHHHHHhCCCCCEEEEecccccccccccc-c----------ccHHHH
888 Confidence 12689999999999999867999999998 45567799999999999999998765221 0 113789
889
890
891 Q NP_000282.1 151 RASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNML 228 (417)
892 Q Consensus 151 a~~LA~l~DiyVNDAFg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll 228 (417)
893 +++||+++|+|||||||++||.|||+++++ +|+++||++|++||++|.+++++|+||+++|+||+|++||+++|++|+
894 T Consensus 148 a~~La~l~DiyVNDAF~~~HR~hAS~vgi~~~lp~s~aG~ll~kEl~~L~~~~~~p~rP~v~IlGGaKv~dKi~~i~~Ll 227 (415)
895 T 16PK_A 148 AKILASYGDVYISDAFGTAHRDSATMTGIPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVSDKIQLLDNML 227 (415)
896 T ss_dssp HHHHHTTCSEEEEECGGGTTSCCCCCCCHHHHHTCCEECHHHHHHHHHHHHHHSCCCSSEEEEECSSCSGGGHHHHHHHG
897 T ss_pred HHHHHhccCeEEeechhhcccCcchhccHhHhhcccchHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCHHHHHHHHHHHH
898 Confidence 999999999999999999999999999999 665899999999999999999999999999999999999999999999
899
900
901 Q NP_000282.1 229 DKVNEMIIGGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIP 308 (417)
902 Q Consensus 229 ~~~D~iligG~~a~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~ 308 (417)
903 +++|.|+|||+|||+||+|+ |+++|+|++|++..+.|++++++|+.++++|++|+|++|.+++...... ...+.+.+|
904 T Consensus 228 ~~~D~IligG~~a~tfl~a~-g~~vG~s~~e~~~~~~a~~ll~~a~~~~~kI~lP~D~~v~~~~~~~~~~-~~~~~~~i~ 305 (415)
905 T 16PK_A 228 QRIDYLLIGGAMAYTFLKAQ-GYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDSP-LITEDQNIP 305 (415)
906 T ss_dssp GGCSEEEECTTHHHHHHHHH-TCCCTTCCCCGGGHHHHHHHHHHHHHTTCEEECCSSEEEESSSSCCSSC-EECSSSCCC
907 T ss_pred HHcCEEEeCchHHHHHHHHc-CCcccccccchhHHHHHHHHHHHHHhcCCEEEceeceeeccccCCCCCC-ceeccccCC
908 Confidence 98899999999999999998 8999999999999999999999888899999999999999875321111 111224788
909
910
911 Q NP_000282.1 309 AGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKAT-SRGCITIIGGGDTATCCAKWNTED 387 (417)
912 Q Consensus 309 ~~~~~~DIGp~Ti~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~-~~~~~~ivGGGdT~~~~~~~g~~~ 387 (417)
913 ++|+++||||+|++.|++.|++|||||||||||+||+++|++||+++++++++++ .+++++|+|||||+++++++|+.+
914 T Consensus 306 ~~~~~~DIGp~Ti~~~~~~i~~aktI~wnGp~G~~E~~~f~~GT~~i~~~l~~~~~~~~a~~vvGGGdT~~~~~~~~~~~ 385 (415)
915 T 16PK_A 306 EGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSIIGGGDSASAAELSGEAK 385 (415)
916 T ss_dssp TTCEEEEECHHHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHHCCEEEECSHHHHHHHHHTTCTT
917 T ss_pred CCCcccccCHHHHHHHHHHHHcCCEEEEeCCCccccCCccccchHHHHHHHHhhcccCCceEEEcchhHHHHHHHhCCcc
918 Confidence 8999999999999999999999999999999999998889999999999997632 247899999999998888888888
919
920
921 Q NP_000282.1 388 KVSHVSTGGGASLELLEGKVLPGVDALSN 416 (417)
922 Q Consensus 388 ~~~~vStgGgA~Le~L~G~~LPgl~aL~~ 416 (417)
923 +++||||||||+||||+|++||||++|++
924 T Consensus 386 ~~s~vStgGGA~Le~L~Gk~LPgl~aL~~ 414 (415)
925 T 16PK_A 386 RMSHVSTGGGASLELLEGKTLPGVTVLDD 414 (415)
926 T ss_dssp TSSEECSCHHHHHHHHTTCCCHHHHTSCB
927 T ss_pred cCeEEEcchHHHHHHHcCCCCCchHhccc
928 Confidence 89999999999999999999999999975
929
930
931 No 15
932 >3OZ7_B Phosphoglycerate kinase (E.C.2.7.2.3); Phosphoglycerate kinase, Transferase, ATP Binding; HET: SO4; 2.7A {Plasmodium falciparum}
933 Probab=100.00 E-value=4.5e-109 Score=840.55 Aligned_cols=413 Identities=61% Similarity=0.995 Sum_probs=361.2 Template_Neff=6.400
934
935 Q NP_000282.1 3 LSNKLTLDKL-DVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPV 81 (417)
936 Q Consensus 3 ~~~~~~i~~~-~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~v 81 (417)
937 ...++++.+. |++||+||||+|+|||+++++|.|++||++++|||+||+++||++|||+||+|||+++. ++.+||+||
938 T Consensus 4 ~~~~~~~~~~~~l~gk~vlvR~D~NVPi~~~~i~d~~Ri~~~lpTI~~Ll~~gak~vvl~sHlGRP~g~~-~~~~Sl~~v 82 (417)
939 T 3OZ7_B 4 LGNKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISHCGRPDGLR-NEKYTLKPV 82 (417)
940 T ss_dssp TTSCCBGGGCCCCTTCEEEEEECCCCCEETTEESCCHHHHTTHHHHHHHHHTTCSEEEEECCCSCCTTSC-CGGGCCSHH
941 T ss_pred CCCCCChhhhhhcCCCEEEEEEeCCCcccCCccCCChhHHhHHHHHHHHHHcCCCEEEEEeeCCCCCCCC-CcccchHHH
942 Confidence 3567888876 89999999999999999888999999999999999999999994499999999998764 568999999
943
944
945 Q NP_000282.1 82 AVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVY 161 (417)
946 Q Consensus 82 a~~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~Diy 161 (417)
947 +++|+++|+.+|.|+++|+|+++.+.++.+++|+|+||||+|||++|++++++++.+..+.+.+++.+|++.||+++|+|
948 T Consensus 83 a~~L~~~l~~~v~f~~~~~g~~~~~~i~~~~~g~illLENlRf~~~E~~~~~~a~~~~~~~~~~~~~~fa~~La~~~diy 162 (417)
949 T 3OZ7_B 83 AETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVF 162 (417)
950 T ss_dssp HHHHHHHHTSCCEEESCSSSHHHHHHHHHSCTTEEEEECCGGGSHHHHSEEECTTSCEEECCHHHHHHHHHHHHTTCSEE
951 T ss_pred HHHHHHHhCCEEEEecccCCHHHHHHHHHccCCCEEEEecccccchhccCCCCCCCCccccCHHhHHHHHHHHhhcCCEE
952 Confidence 99999999877999999999888888899999999999999999977632111000000111112467999999999999
953
954
955 Q NP_000282.1 162 VNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMA 241 (417)
956 Q Consensus 162 VNDAFg~aHR~~aS~~gi~l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a 241 (417)
957 |||||+++||.|||+++++...++||++|++||++|.+++++|+||+++|+||+|++||+++|++|+++||.|+|||+||
958 T Consensus 163 VnDAF~~~HR~~ASv~gi~~~~~~aG~l~~kEi~~L~~~~~~p~rP~v~IlGG~Kv~dKi~~i~~Ll~~~D~IligG~~a 242 (417)
959 T 3OZ7_B 163 INDAFGTAHRAHSSMVGVKLNVKASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGGMA 242 (417)
960 T ss_dssp EEECGGGTTSCCHHHHCCCCSEEEECHHHHHHHHHHHHHHSSCCSSEEEEECSSCSGGGHHHHHHHHHHCSEEEECTTHH
961 T ss_pred EecccccCCCCCCchHHHHhcHHhhCHHHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHHHHHhCCEEEECcHHH
962 Confidence 99999999999999999993228999999999999999999999999999999999999999999999999999999999
963
964
965 Q NP_000282.1 242 FTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESS 321 (417)
966 Q Consensus 242 ~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti 321 (417)
967 |+||+|++++++|+|++|++..+.|++++++|+.++++|++|+|++|.+....++....+...+.+|++|+++||||+|+
968 T Consensus 243 ~~fl~a~~~~~vg~s~~e~~~~~~a~~il~~a~~~~~ki~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti 322 (417)
969 T 3OZ7_B 243 YTFKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDNWMGLDAGPKSI 322 (417)
970 T ss_dssp HHHHHHHHCCCBTTCCCCTTTHHHHHHHHHHHHHTTCEEECCSEEEEESSSSTTSCEEEEETTTCBCTTCEEEEECHHHH
971 T ss_pred HHHHHHHCCCcCCccccchhhHHHHHHHHHHHHHcCCEEEEeeeeeecccCCCCCcCceecCcCCCCCCcccccCCHHHH
972 Confidence 99999984558999999998999999999998889999999999999987533221111222237888999999999999
973
974
975 Q NP_000282.1 322 KKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLE 401 (417)
976 Q Consensus 322 ~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le 401 (417)
977 +.|+++|++|||||||||||+||.++|++||+++++++++++++++++|+|||||+++++++|+.++++||||||||+||
978 T Consensus 323 ~~~~~~I~~aktI~wnGplG~~E~~~f~~GT~~i~~~l~~~~~~~a~~vvGGGdT~~~~~~~g~~~~~~~vSTgGGA~Le 402 (417)
979 T 3OZ7_B 323 ENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLE 402 (417)
980 T ss_dssp HHHHHHHHTCSEEEEESCSBCTTSGGGCHHHHHHHHHHHHHHHHTCEEEECSHHHHHHHHHHTCGGGSSEECCCSHHHHH
981 T ss_pred HHHHHHHHhCCEEEEeCCCccccCCCcChhHHHHHHHHHHHhcCCCEEEEeChHHHHHHHHcCCCCCcEEEEechHHHHH
982 Confidence 99999999999999999999999888999999999999763224789999999999988888887789999999999999
983
984
985 Q NP_000282.1 402 LLEGKVLPGVDALSN 416 (417)
986 Q Consensus 402 ~L~G~~LPgl~aL~~ 416 (417)
987 ||+|++||||++|++
988 T Consensus 403 ~L~G~~LPgi~aL~~ 417 (417)
989 T 3OZ7_B 403 LLEGKELPGVLALSN 417 (417)
990 T ss_dssp HHTTCCCHHHHTSCC
991 T ss_pred HHcCCCCChhHhhcC
992 Confidence 999999999999974
993
994
995 No 16
996 >4DG5_A Phosphoglycerate kinase (E.C.2.7.2.3); Bi-lobal protein, Transferase, ATP Synthesis; 2.3A {Staphylococcus aureus}
997 Probab=100.00 E-value=5.2e-109 Score=836.15 Aligned_cols=392 Identities=44% Similarity=0.770 Sum_probs=353.4 Template_Neff=6.300
998
999 Q NP_000282.1 5 NKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAVE 84 (417)
1000 Q Consensus 5 ~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va~~ 84 (417)
1001 .++++.+.|++|||||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++..++.+||+||+++
1002 T Consensus 9 ~~~~~~~~dl~gK~vlvR~D~NVP~~~~~i~dd~RI~~~lpTI~~L~~~ga-kvvl~sHlGrP~g~~~~~~~Sl~pva~~ 87 (403)
1003 T 4DG5_A 9 AKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGG-KIVLFSHLGKVKEESDKAKLTLRPVAED 87 (403)
1004 T ss_dssp CBCBGGGSCCTTCEEEEECCCCCCCSSSCCSCTHHHHHHHHHHHHHHHTTC-EEEEECCCSCCCSGGGSGGGCSHHHHHH
1005 T ss_pred ccccCCchhcCCCEEEEEeecccccCCCCcCCchHHHHHHHHHHHHHHCCC-EEEEEeccCccCCccchhhcchHHHHHH
1006 Confidence 467788889999999999999999998899999999999999999999999 5999999999987522457999999999
1007
1008
1009 Q NP_000282.1 85 LKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVND 164 (417)
1010 Q Consensus 85 L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~DiyVND 164 (417)
1011 |+++|+.+|.|+++|+|+++++.++.+++|+|+||||+|||++|.+. +. +++.+|++.||+++|+||||
1012 T Consensus 88 L~~~l~~~V~f~~d~~g~~~~~~i~~~~~g~illLENlRf~~~E~~~-e~----------~n~~~fa~~LA~l~DiyVND 156 (403)
1013 T 4DG5_A 88 LSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRYEDLDGKK-ES----------KNDPELGKYWASLGDVFVND 156 (403)
1014 T ss_dssp HHHHHTSCCEEESCSSSHHHHHHHHTCCTTCEEEECCGGGGGTTTTT-TT----------TTCHHHHHHHHTTCSEEEEC
1015 T ss_pred HHHHcCCeEEecCCcCCHHHHHHHHhccCCCEEEEccccccCCCCCc-cc----------ccCHHHHHHHHhcchHhhhc
1016 Confidence 99999877999999999888888899999999999999999865211 10 11478999999999999999
1017
1018
1019 Q NP_000282.1 165 AFGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAF 242 (417)
1020 Q Consensus 165 AFg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a~ 242 (417)
1021 |||++||.|||+++++ +| ++||++|++|+++|.+++++|+||+++|+||+|++||+++|++|++++|.|++||+|||
1022 T Consensus 157 AF~~~HR~hAS~vgi~~~lp-s~aG~ll~kEl~~L~k~~~~p~rP~v~IlGGaKv~dKi~~i~~Ll~~~D~IligG~lA~ 235 (403)
1023 T 4DG5_A 157 AFGTAHREHASNVGISTHLE-TAAGFLMDKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAY 235 (403)
1024 T ss_dssp CGGGTTSCCCCCCCHHTSSC-EEECHHHHHHCCCCCHHHHSCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECSTTHH
1025 T ss_pred CHhHccCcCcchHHHHHHHH-HHhhHHHHHHHHHHHHHHhCCCCCEEEEEcCCcHHHHHHHHHHHHHHcCEEEEcchHHH
1026 Confidence 9999999999999999 67 89999999999999999999999999999999999999999999998899999999999
1027
1028
1029 Q NP_000282.1 243 TFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSK 322 (417)
1030 Q Consensus 243 tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~ 322 (417)
1031 +||+|+ |+++|+|++|++..+.|++++++ ++++|++|+|++|.+.+..++... ..+.+.+|++|+++||||+|++
1032 T Consensus 236 tfL~a~-g~~vg~s~~e~~~~~~a~~ll~~---~~~ki~lP~D~~v~~~~~~~~~~~-~~~~~~i~~~~~~~DIGp~Ti~ 310 (403)
1033 T 4DG5_A 236 TFLKAQ-GKEIGISLLEEDKIDFAKDLLEK---HGDKIVLPVDTKVAKEFSNDAKIT-VVPSDSIPADQEGMDIGPNTVK 310 (403)
1034 T ss_dssp HHHHHT-TCCCTTSCCCGGGHHHHHHHHHH---STTTEECCSEEEEESSSSTTSCCE-EEEGGGCCTTCEEEEECHHHHH
1035 T ss_pred HHHHHc-CCeeeeeecchhhHHHHHHHHHH---ccCceEeeceeeeecccCCCCceE-EecCCCCCCCcccccCCHHHHH
1036 Confidence 999998 88999999999888999998873 588999999999998754322211 1122578889999999999999
1037
1038
1039 Q NP_000282.1 323 KYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLEL 402 (417)
1040 Q Consensus 323 ~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le~ 402 (417)
1041 .|.+.|++|||||||||||+||.++|++||+++++++++++ ++++|+|||||+++++++|+.++++||||||||+|||
1042 T Consensus 311 ~~~~~I~~aktI~wnGP~G~~E~e~f~~GT~~i~~aia~~~--~a~~ivGGGdT~~~~~~~g~~~~~~~vStGGGA~Le~ 388 (403)
1043 T 4DG5_A 311 LFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANLK--DAITIIGGGDSAAAAISLGFENDFTHISTGGGASLEY 388 (403)
1044 T ss_dssp HHHHTTTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHCS--SSEEEECSHHHHHHHHHTTCGGGSSEECSCHHHHHHH
1045 T ss_pred HHHHHHhcCCEEEEeCCCccccCccccchHHHHHHHHHhcC--CCEEEEeCchHHHHHHHcCCCCCceEEEechHHHHHH
1046 Confidence 99999999999999999999988889999999999997632 7899999999999998889888899999999999999
1047
1048
1049 Q NP_000282.1 403 LEGKVLPGVDALSN 416 (417)
1050 Q Consensus 403 L~G~~LPgl~aL~~ 416 (417)
1051 |+|+.||||++|++
1052 T Consensus 389 L~Gk~LPgl~aL~~ 402 (403)
1053 T 4DG5_A 389 LEGKELPGIKAINN 402 (403)
1054 T ss_dssp HTTCCCHHHHTSCB
1055 T ss_pred HcCCCCCchHHhhc
1056 Confidence 99999999999975
1057
1058
1059 No 17
1060 >6HXE_A Phosphoglycerate kinase (E.C.2.7.2.3); Complex, 3-phosphoglycerate, hinge binding, TRANSFERASE; HET: 3PG; 2.1A {Pseudomonas sp. 'TAC II 18'}
1061 Probab=100.00 E-value=4.3e-108 Score=826.14 Aligned_cols=381 Identities=39% Similarity=0.690 Sum_probs=341.5 Template_Neff=6.400
1062
1063 Q NP_000282.1 4 SNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAV 83 (417)
1064 Q Consensus 4 ~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va~ 83 (417)
1065 |.++++++.|++||+||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++..++++||+||++
1066 T Consensus 1 ~~~~~l~~~~l~gK~vl~R~D~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~ga-~vil~sHlGrP~g~~~~~~~Sl~~va~ 79 (387)
1067 T 6HXE_A 1 MTVLKMTDLDLQGKRVLIREDLNVPVKDGVVTSDARILASLPTIKLALEKGA-AVMVCSHLGRPTEGEFSAENSLKPVAD 79 (387)
1068 T ss_dssp -CCCBGGGSCCTTCEEEEECCCCCCEETTEECCCHHHHHHHHHHHHHHHTTC-EEEEECCCSCCCTTSCCGGGCSHHHHH
1069 T ss_pred CCccccchhhcCCCEEEEEeecCccccCCccCCcHHHHhHHHHHHHHHHcCC-cEEEEeecCCCCCCCCChhhcHHHHHH
1070 Confidence 3477788888999999999999999998899999999999999999999999 599999999998652245899999999
1071
1072
1073 Q NP_000282.1 84 ELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVN 163 (417)
1074 Q Consensus 84 ~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~DiyVN 163 (417)
1075 +|+++|+.+|.|++++++. ..+++|+|+||||+|||++|+++ +.+|++.||+++|+|||
1076 T Consensus 80 ~L~~~l~~~v~f~~d~~~~------~~~~~g~i~lLENlRF~~~E~~n---------------~~~fa~~La~l~DiyVn 138 (387)
1077 T 6HXE_A 80 YLSKALGREVPLVSDYLNG------VDVKAGDIVLFENVRFNKGEKKN---------------ADELAKQYAALCDVFVM 138 (387)
1078 T ss_dssp HHHHHHTSCCCEESCCTTC------CCCCTTCEEEECCGGGSTTTTTT---------------CHHHHHHHHHTCSEEEE
1079 T ss_pred HHHHHhCCCCCccccccCC------ccCCCCcEEEEeCccCCCccccC---------------HHHHHHHHHHcccHhhc
1080 Confidence 9999998779999865542 27889999999999999876532 36799999999999999
1081
1082
1083 Q NP_000282.1 164 DAFGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMA 241 (417)
1084 Q Consensus 164 DAFg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a 241 (417)
1085 |||+++||.|||+++++ +|+++||++|++||++|++++++|+||+++|+||+|++||+++|++|++++|.|++||+||
1086 T Consensus 139 DAF~~~HR~haS~vgi~~~l~~s~aG~l~~kEl~~L~~~l~~p~rP~v~IlGGaKv~dKi~~i~~Ll~~~D~iligG~~a 218 (387)
1087 T 6HXE_A 139 DAFGTAHRAEGSTHGVAKFAKVAAAGPLLAAELDALGKALGAPAKPMAAIVAGSKVSTKLDVLNSLSQICDLLIVGGGIA 218 (387)
1088 T ss_dssp CCGGGTTCCCCCCCCHHHHSSEEEECHHHHHHHHHHHHHHTSCCSSEEEEEEESCTGGGHHHHHHHHTTCSEEEEEHHHH
1089 T ss_pred ccHhhcccccCchhhHhhccchhhHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCHHHHHHHHHHHHHHCCEEEEeChHH
1090 Confidence 99999999999999998 6668999999999999999999999999999999999999999999999889999999999
1091
1092
1093 Q NP_000282.1 242 FTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESS 321 (417)
1094 Q Consensus 242 ~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti 321 (417)
1095 |+||+|+ |+++|+|++|++..+.|+++++ +++|++|+|++|.+.+..++... ......+|++|+++||||+|+
1096 T Consensus 219 ~tfL~a~-g~~vg~S~~e~~~~~~a~~il~-----~~ki~lP~D~vv~~~~~~~~~~~-~~~~~~ip~~~~~~DIGp~Ti 291 (387)
1097 T 6HXE_A 219 DTFLAAA-GHPVGKSLYEPDLLDTARAIAA-----KVNVPLPTDVVVAKEFAESAEAT-VKLIADVAADDMILDIGPQTA 291 (387)
1098 T ss_dssp HHHHHHT-TCCCCSSCCCGGGHHHHHHHHH-----HSBCCCCSEEEEESCSSTTCCCE-EEEGGGCCTTCEEEEECHHHH
1099 T ss_pred HHHHHHc-CCCCCccccChhHHHHHHHHHH-----cCcccccccEEEchhhhccccce-EEehhhcCCCceeecCCHHHH
1100 Confidence 9999998 8899999999888888888864 58999999999998754322110 111237888999999999999
1101
1102
1103 Q NP_000282.1 322 KKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLE 401 (417)
1104 Q Consensus 322 ~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le 401 (417)
1105 +.|+++|++|||||||||||+||+++|++||+++++++++. ++++|+|||||+++++++|+.++++||||||||+||
1106 T Consensus 292 ~~~~~~I~~aktI~wNGP~G~~E~~~f~~GT~~i~~al~~~---~a~~ivGGGdT~~~~~~~g~~~~~s~vSTGGGA~Le 368 (387)
1107 T 6HXE_A 292 EHFAQLLKTSKTILWNGPVGVFEFDQFGNGTKVLAKAIADS---AAFSIAGGGDTLAAIDKYGVADQISQISTGGGAFLE 368 (387)
1108 T ss_dssp HHHHHHHHHCSEEEEECCSSCTTSGGGCHHHHHHHHHHHHC---SSEEEEESHHHHHHHHHHTCGGGSSEEECCHHHHHH
1109 T ss_pred HHHHHHHHcCCeEEEcCCCCccccCccCcHHHHHHHHHHhc---CCeEEEcCHHHHHHHHHhCCCccceEEEcchhHHHH
1110 Confidence 99999999999999999999999888999999999999762 689999999999989988988889999999999999
1111
1112
1113 Q NP_000282.1 402 LLEGKVLPGVDALSN 416 (417)
1114 Q Consensus 402 ~L~G~~LPgl~aL~~ 416 (417)
1115 ||+|+.||||++|++
1116 T Consensus 369 ~L~G~~LPgl~aL~~ 383 (387)
1117 T 6HXE_A 369 FVEGKVLPAVEVLES 383 (387)
1118 T ss_dssp HHTTCCCHHHHHHHH
1119 T ss_pred HHcCCCCchHHHHHH
1120 Confidence 999999999999985
1121
1122
1123 No 18
1124 >4NG4_B Phosphoglycerate kinase (E.C.2.7.2.3); phosphoglycerate kinase, TRANSFERASE; HET: ADP; 2.78A {Coxiella burnetii}
1125 Probab=100.00 E-value=4.7e-108 Score=829.99 Aligned_cols=389 Identities=41% Similarity=0.687 Sum_probs=351.1 Template_Neff=6.400
1126
1127 Q NP_000282.1 1 MSLSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEP 80 (417)
1128 Q Consensus 1 ~~~~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~ 80 (417)
1129 |+...++++++.|++||+||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++..++.+||+|
1130 T Consensus 9 ~~~~~~~~~~~~~l~gk~vlvR~D~NVp~~~~~i~dd~Ri~~~lpTI~~Ll~~ga-kvvl~sHlGrP~~~~~~~~~Sl~~ 87 (404)
1131 T 4NG4_B 9 MKALPFLSMSNLNLHNKRVMIREDLNVPMKNGKITNDERIVRALPTIQKAIEQKA-RVMILSHLGRPEEGKFEKEFSLAP 87 (404)
1132 T ss_dssp ----CCCBGGGSCCTTCEEEEEECCCCCEETTEESCCHHHHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCCGGGCSHH
1133 T ss_pred ccccccccccccccCCCEEEEEeecCccccCCccCCcHHHHHHHHHHHHHHHCCC-eEEEEeeccCcCCCCCcccccHHH
1134 Confidence 5666778887788999999999999999988899999999999999999999999 599999999998753246899999
1135
1136
1137 Q NP_000282.1 81 VAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDV 160 (417)
1138 Q Consensus 81 va~~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~Di 160 (417)
1139 |+++|+++|+.+|.|+++|++. ..+++|+|+||||+|||++|+.+ +++|+++||+++|+
1140 T Consensus 88 v~~~L~~~l~~~v~fv~d~~~~------~~~~~g~ilLLENlRf~~~E~~~---------------~~~fa~~La~l~Di 146 (404)
1141 T 4NG4_B 88 VARLLSKKLNQKVPLINDWLKG------VAVEPGQAILCENVRFNKGENEN---------------NTELAKRMAELCDI 146 (404)
1142 T ss_dssp HHHHHHHHTC-CCCEESSGGGC------CCCCTTCEEEECCGGGSTTTTTT---------------CHHHHHHHHHTCSE
1143 T ss_pred HHHHHHHHhCCCCCcccccccc------ccCCCCCEEEEeccccCCccccc---------------cHHHHHHHHhcccH
1144 Confidence 9999999998779999999873 37889999999999999976532 36799999999999
1145
1146
1147 Q NP_000282.1 161 YVNDAFGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGG 238 (417)
1148 Q Consensus 161 yVNDAFg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG 238 (417)
1149 ||||||+++||.|||+++++ +|+++||++|++|+++|++++++|+||+++|+||+|++||+++|++|++++|.|+|||
1150 T Consensus 147 yVnDAF~~~HR~~aS~~gi~~~l~~~~aG~l~~kEl~~l~~~~~~p~~P~v~IlGG~Kv~dKi~li~~Ll~~~D~iligG 226 (404)
1151 T 4NG4_B 147 FVMDAFATAHRAQASTAGVAAYAKLACAGPLLISEVEALSRALENPQKPLVAVVGGSKVSTKIHLLENLLDKVDQLIVGG 226 (404)
1152 T ss_dssp EEECCGGGTTSCCCCCCCHHHHCSEEEECHHHHHHHHHHHHHHHSCCSSEEEEEEESCGGGTHHHHHHHHTTCSEEEEEE
1153 T ss_pred hhhcCHhHcccccccccchhhccchhhhhHHHHHHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHHHHHHhcCeEEEcC
1154 Confidence 99999999999999999998 6658999999999999999999999999999999999999999999999999999999
1155
1156
1157 Q NP_000282.1 239 GMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGP 318 (417)
1158 Q Consensus 239 ~~a~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp 318 (417)
1159 +||++||+|+ |+++|+|++|++..+.|++++++|++++++|++|+|++|.+.+..++.. .......+|++|+++||||
1160 T Consensus 227 ~~a~tFL~a~-g~~ig~S~~e~~~~~~a~~ll~~a~~~~~kI~lP~D~vv~~~~~~~~~~-~~~~~~~i~~~~~~lDIGp 304 (404)
1161 T 4NG4_B 227 GIANTFLKAQ-GYSIGKSLCENEWLDAAQQFWEKAAEKNVSLPLPVDVIVADELSEDAKA-TVKNIDAVTSNESIFDVGP 304 (404)
1162 T ss_dssp HHHHHHHHHT-TCCCTTCCCCGGGHHHHHHHHHHHHHHTCBCCCCSEEEEESSCSTTSCC-EEEEGGGCCTTCEEEEECH
1163 T ss_pred HHHHHHHHHc-CCCcccccccchHHHHHHHHHHHHHHCCCCcCceeEEEEcccCCccccc-EeecccccCCCcccccCCH
1164 Confidence 9999999998 8999999999999999999999999999999999999999875433221 1112247888999999999
1165
1166
1167 Q NP_000282.1 319 ESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGA 398 (417)
1168 Q Consensus 319 ~Ti~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA 398 (417)
1169 +|++.|+++|++|||||||||||+||+++|++||+++++++++. ++++|+|||||+++++++++.++++||||||||
1170 T Consensus 305 ~Ti~~~~~~I~~aktI~wnGp~G~~E~~~f~~GT~~i~~~l~~~---~a~sivGGGDT~~~~~~~~~~~~~~~vStgGgA 381 (404)
1171 T 4NG4_B 305 NTSATYAKLMAQAGTIVWNGPIGVFEIEAFSQGTRALAQAVAKS---TAYSIVGGGDTLAALDKFNLTDQMSYVSTAGGA 381 (404)
1172 T ss_dssp HHHHHHHHHHHHCSEEEEESCSSCTTSSTTCHHHHHHHHHHHHS---CSEEEECCHHHHHHHHHTTCGGGSSEECCCTHH
1173 T ss_pred HHHHHHHHHHHhCCEEEEeCCCCcccchhHcHHHHHHHHHHHhC---CCCEEEccHHHHHHHHHCCCCcCceEEecccHH
1174 Confidence 99999999999999999999999999888999999999999763 689999999999999989988889999999999
1175
1176
1177 Q NP_000282.1 399 SLELLEGKVLPGVDALSN 416 (417)
1178 Q Consensus 399 ~Le~L~G~~LPgl~aL~~ 416 (417)
1179 +||||+|++||||++|++
1180 T Consensus 382 ~Le~L~G~~LPgl~aL~~ 399 (404)
1181 T 4NG4_B 382 FLEFLEGKILPAIKILTQ 399 (404)
1182 T ss_dssp HHHHHHTCCCHHHHHHHH
1183 T ss_pred HHHHHcCCCChHHHHHHH
1184 Confidence 999999999999999986
1185
1186
1187 No 19
1188 >4NG4_C Phosphoglycerate kinase (E.C.2.7.2.3); phosphoglycerate kinase, TRANSFERASE; HET: ADP; 2.78A {Coxiella burnetii}
1189 Probab=100.00 E-value=4.7e-108 Score=829.99 Aligned_cols=389 Identities=41% Similarity=0.687 Sum_probs=348.3 Template_Neff=6.400
1190
1191 Q NP_000282.1 1 MSLSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEP 80 (417)
1192 Q Consensus 1 ~~~~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~ 80 (417)
1193 |+...++++++.|++||+||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++..++.+||+|
1194 T Consensus 9 ~~~~~~~~~~~~~l~gk~vlvR~D~NVp~~~~~i~dd~Ri~~~lpTI~~Ll~~ga-kvvl~sHlGrP~~~~~~~~~Sl~~ 87 (404)
1195 T 4NG4_C 9 MKALPFLSMSNLNLHNKRVMIREDLNVPMKNGKITNDERIVRALPTIQKAIEQKA-RVMILSHLGRPEEGKFEKEFSLAP 87 (404)
1196 T ss_dssp ----CCCBGGGSCCTTCEEEEEECCCCCEETTEESCCHHHHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCCGGGCSHH
1197 T ss_pred ccccccccccccccCCCEEEEEeecCccccCCccCCcHHHHHHHHHHHHHHHCCC-eEEEEeeccCcCCCCCcccccHHH
1198 Confidence 5666778887788999999999999999988899999999999999999999999 599999999998753246899999
1199
1200
1201 Q NP_000282.1 81 VAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDV 160 (417)
1202 Q Consensus 81 va~~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~Di 160 (417)
1203 |+++|+++|+.+|.|+++|++. ..+++|+|+||||+|||++|+.+ +++|+++||+++|+
1204 T Consensus 88 v~~~L~~~l~~~v~fv~d~~~~------~~~~~g~ilLLENlRf~~~E~~~---------------~~~fa~~La~l~Di 146 (404)
1205 T 4NG4_C 88 VARLLSKKLNQKVPLINDWLKG------VAVEPGQAILCENVRFNKGENEN---------------NTELAKRMAELCDI 146 (404)
1206 T ss_dssp HHHHHHHHCC--CCEESSGGGC------CCCCTTCEEEECCGGGSTTTTTT---------------CHHHHHHHHHTCSE
1207 T ss_pred HHHHHHHHhCCCCCcccccccc------ccCCCCCEEEEeccccCCccccc---------------cHHHHHHHHhcccH
1208 Confidence 9999999998779999999873 37889999999999999976532 36799999999999
1209
1210
1211 Q NP_000282.1 161 YVNDAFGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGG 238 (417)
1212 Q Consensus 161 yVNDAFg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG 238 (417)
1213 ||||||+++||.|||+++++ +|+++||++|++|+++|++++++|+||+++|+||+|++||+++|++|++++|.|+|||
1214 T Consensus 147 yVnDAF~~~HR~~aS~~gi~~~l~~~~aG~l~~kEl~~l~~~~~~p~~P~v~IlGG~Kv~dKi~li~~Ll~~~D~iligG 226 (404)
1215 T 4NG4_C 147 FVMDAFATAHRAQASTAGVAAYAKLACAGPLLISEVEALSRALENPQKPLVAVVGGSKVSTKIHLLENLLDKVDQLIVGG 226 (404)
1216 T ss_dssp EEECCGGGTTSCCCCCCCHHHHCSEEEECHHHHHHHHHHHHHHHSCCSSEEEEEEESCGGGTHHHHHHHHTTCSEEEEEE
1217 T ss_pred hhhcCHhHcccccccccchhhccchhhhhHHHHHHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHHHHHHhcCeEEEcC
1218 Confidence 99999999999999999998 6658999999999999999999999999999999999999999999999999999999
1219
1220
1221 Q NP_000282.1 239 GMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGP 318 (417)
1222 Q Consensus 239 ~~a~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp 318 (417)
1223 +||++||+|+ |+++|+|++|++..+.|++++++|++++++|++|+|++|.+.+..++.. .......+|++|+++||||
1224 T Consensus 227 ~~a~tFL~a~-g~~ig~S~~e~~~~~~a~~ll~~a~~~~~kI~lP~D~vv~~~~~~~~~~-~~~~~~~i~~~~~~lDIGp 304 (404)
1225 T 4NG4_C 227 GIANTFLKAQ-GYSIGKSLCENEWLDAAQQFWEKAAEKNVSLPLPVDVIVADELSEDAKA-TVKNIDAVTSNESIFDVGP 304 (404)
1226 T ss_dssp HHHHHHHHHT-TCCCTTCCCCGGGHHHHHHHHHHHHHHTCBCCCCSEEEEESSCSTTSCC-EEEEGGGCCTTCEEEEECH
1227 T ss_pred HHHHHHHHHc-CCCcccccccchHHHHHHHHHHHHHHCCCCcCceeEEEEcccCCccccc-EeecccccCCCcccccCCH
1228 Confidence 9999999998 8999999999999999999999999999999999999999875433221 1112247888999999999
1229
1230
1231 Q NP_000282.1 319 ESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGA 398 (417)
1232 Q Consensus 319 ~Ti~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA 398 (417)
1233 +|++.|+++|++|||||||||||+||+++|++||+++++++++. ++++|+|||||+++++++++.++++||||||||
1234 T Consensus 305 ~Ti~~~~~~I~~aktI~wnGp~G~~E~~~f~~GT~~i~~~l~~~---~a~sivGGGDT~~~~~~~~~~~~~~~vStgGgA 381 (404)
1235 T 4NG4_C 305 NTSATYAKLMAQAGTIVWNGPIGVFEIEAFSQGTRALAQAVAKS---TAYSIVGGGDTLAALDKFNLTDQMSYVSTAGGA 381 (404)
1236 T ss_dssp HHHHHHHHHHHHCSEEEEESCSSCTTSSGGGHHHHHHHHHHHHS---CSEEEECCHHHHHHHHHTTCGGGSSEECCCTHH
1237 T ss_pred HHHHHHHHHHHhCCEEEEeCCCCcccchhHcHHHHHHHHHHHhC---CCCEEEccHHHHHHHHHCCCCcCceEEecccHH
1238 Confidence 99999999999999999999999999888999999999999763 689999999999999989988889999999999
1239
1240
1241 Q NP_000282.1 399 SLELLEGKVLPGVDALSN 416 (417)
1242 Q Consensus 399 ~Le~L~G~~LPgl~aL~~ 416 (417)
1243 +||||+|++||||++|++
1244 T Consensus 382 ~Le~L~G~~LPgl~aL~~ 399 (404)
1245 T 4NG4_C 382 FLEFLEGKILPAIKILTQ 399 (404)
1246 T ss_dssp HHHHHHC--CHHHHHHHH
1247 T ss_pred HHHHHcCCCChHHHHHHH
1248 Confidence 999999999999999986
1249
1250
1251 No 20
1252 >6I06_A Phosphoglycerate kinase (E.C.2.7.2.3); hinge binding, TRANSFERASE, kinase, glycolysis; 2.0A {Pseudomonas}
1253 Probab=100.00 E-value=1e-107 Score=823.37 Aligned_cols=381 Identities=39% Similarity=0.687 Sum_probs=326.8 Template_Neff=6.400
1254
1255 Q NP_000282.1 4 SNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAV 83 (417)
1256 Q Consensus 4 ~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va~ 83 (417)
1257 |.++++++.|++|||||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++..++.+||+||++
1258 T Consensus 1 ~~~~~l~~~~l~gK~vlvR~D~NVPl~~~~i~d~~RI~~~lpTI~~L~~~ga-kvil~sHlGrP~g~~~~~~~Sl~~va~ 79 (387)
1259 T 6I06_A 1 MTVLKMTDLDLQGKRVLIREDLNVPVKDGVVTSDARILASLPTIKLALEKGA-AVMVCSHLGRPTEGEFSAENSLKPVAD 79 (387)
1260 T ss_dssp CCBGG--GSCCTTCEEEEECCCCCCBSSSCBSCCHHHHHHHHHHHHHHHTTC-EEEEECCCSCCCTTSCCGGGCSHHHHH
1261 T ss_pred CCCccCChHHcCCCEEEEEeecCcccCCCCCCCcHHHHHHHHHHHHHHHCCC-cEEEEeecCCCCCCCCCcccchHHHHH
1262 Confidence 3467777788999999999999999998899999999999999999999999 599999999998652235799999999
1263
1264
1265 Q NP_000282.1 84 ELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVN 163 (417)
1266 Q Consensus 84 ~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~DiyVN 163 (417)
1267 +|+++|+.+|.|+++++.. ..+++|+|+||||+|||++|+++ +.+|++.||+++|+|||
1268 T Consensus 80 ~L~~~l~~~v~f~~~~~~~------~~l~~g~illLENlRF~~~E~~n---------------~~~fa~~La~l~DiyVn 138 (387)
1269 T 6I06_A 80 YLSKALGREVPLVSDYLNG------VDVKAGDIVLFENVRFNKGEKKN---------------ADELAKQYAALCDVFVM 138 (387)
1270 T ss_dssp HHHHHHTSCCCEESCCTTC------CCCCTTCEEEECCGGGSTTTTTT---------------CHHHHHHHHHTCSEEEE
1271 T ss_pred HHHHHHCCCceecCCCCCC------ccCCCCcEEEEeCcccCCCcccC---------------CHHHHHHHHhhccHhhc
1272 Confidence 9999998778999855442 26889999999999999876532 36799999999999999
1273
1274
1275 Q NP_000282.1 164 DAFGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMA 241 (417)
1276 Q Consensus 164 DAFg~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~iligG~~a 241 (417)
1277 |||+++||.|||+++++ +|+++||++|++|+++|++++++|+||+++|+||+|++||+++|++|++++|.|++||+||
1278 T Consensus 139 DAF~~~HR~~aS~vgi~~~lp~s~aG~l~~kEl~~L~~~~~~p~rP~v~IlGGaKv~dKi~~i~~Ll~~~D~iligG~~a 218 (387)
1279 T 6I06_A 139 DAFGTAHRAEGSTHGVAKFAKVAAAGPLLAAELDALGKALGAPAKPMAAIVAGSKVSTKLDVLNSLSQICDLLIVGGGIA 218 (387)
1280 T ss_dssp CCGGGTTSCCCCCCCHHHHSSEEEECHHHHHHHHHHHHHHSSCCSSEEEEEEESCTGGG--HTCSEE------EEEHHHH
1281 T ss_pred ccHhhcccccccccccccCCCchhhhHHHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHHHHHcCCEEEEcChHH
1282 Confidence 99999999999999998 6668999999999999999999999999999999999999999999999889999999999
1283
1284
1285 Q NP_000282.1 242 FTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESS 321 (417)
1286 Q Consensus 242 ~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti 321 (417)
1287 |+||+|+ |+++|+|++|++..+.|+++++ +++|++|+|++|.+.+..+.... .....++|++|+++||||+|+
1288 T Consensus 219 ~tfL~a~-g~~vg~S~~e~~~~~~a~~il~-----~~ki~lP~D~vv~~~~~~~~~~~-~~~~~~ip~~~~~~DIGp~Ti 291 (387)
1289 T 6I06_A 219 DTFLAAA-GHPVGKSLYEPDLLDTARAIAA-----KVNVPLPTDVVVAKEFAESAEAT-VKLIADVAADDMILDIGPQTA 291 (387)
1290 T ss_dssp HHHHHHT-TCCCBSCCCCGGGHHHHHHHHH-----HSBCCCCSEEEEESCSSTTCCCE-ECCTTC-----EEEEECHHHH
1291 T ss_pred HHHHHHc-CCcccccccchhHHHHHHHHHh-----cCeEEcccCEEecccCCCCCCcc-eeccccCCCCceeecCCHHHH
1292 Confidence 9999998 8889999999888888888764 68999999999998653321110 111237888999999999999
1293
1294
1295 Q NP_000282.1 322 KKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLE 401 (417)
1296 Q Consensus 322 ~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgGgA~Le 401 (417)
1297 +.|+++|++|||||||||||+||+++|++||+++++++++. ++++|+|||||+++++++|+.++++||||||||+||
1298 T Consensus 292 ~~~~~~I~~aktI~wnGp~G~~E~~~f~~GT~~i~~ai~~~---~a~~ivGGGdT~~~~~~~g~~~~~~~vStgGGA~L~ 368 (387)
1299 T 6I06_A 292 EHFAQLLKTSKTILWNGPVGVFEFDQFGNGTKVLAKAIADS---AAFSIAGGGDTLAAIDKYGVADQISYISTGGGAFLE 368 (387)
1300 T ss_dssp HHHHHHHHTCSEEEEECCSBCTTSGGGCHHHHHHHHHHHHS---CSEEEEESHHHHHHHHHHTCGGGSSEEECCTHHHHH
1301 T ss_pred HHHHHHHHhCCEEEEeCCCChhcCCccchHHHHHHHHHHhC---CCcEEEcCHHHHHHHHHcCCccCcEEEEechHHHHH
1302 Confidence 99999999999999999999999888999999999999762 689999999999999988988889999999999999
1303
1304
1305 Q NP_000282.1 402 LLEGKVLPGVDALSN 416 (417)
1306 Q Consensus 402 ~L~G~~LPgl~aL~~ 416 (417)
1307 ||+|++||||++|++
1308 T Consensus 369 ~L~G~~LPgl~aL~~ 383 (387)
1309 T 6I06_A 369 FVEGKVLPAVEVLES 383 (387)
1310 T ss_dssp HHTTCCCHHHHHHHH
1311 T ss_pred HHcCCCCchHHHHhH
1312 Confidence 999999999999975
1313
1314
1315 No 21
1316 >2CUN_A Phosphoglycerate kinase (E.C.2.7.2.3); Phosphoglycerate kinase, Structural Genomics, TANPAKU; HET: 3PG, MPD, GOL; 2.1A {Pyrococcus horikoshii}
1317 Probab=100.00 E-value=3.4e-105 Score=811.02 Aligned_cols=387 Identities=33% Similarity=0.531 Sum_probs=341.8 Template_Neff=6.500
1318
1319 Q NP_000282.1 8 TLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAVELKS 87 (417)
1320 Q Consensus 8 ~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~~~~~~~Sl~~va~~L~~ 87 (417)
1321 +++|.|++||+||||+|+|||+++++|.|++||++++|||+||+++|| +|||+||+|||+++. .+|++||+++|++
1322 T Consensus 3 ~~~~~~l~gK~vlvR~D~Nvpl~~~~i~d~~Ri~~~lpTI~~Ll~~ga-kvvl~sH~GrP~~~~---~~sl~~v~~~L~~ 78 (410)
1323 T 2CUN_A 3 RLEDFNFHNKTVFLRVDLNSPMKDGKIISDARFKAVLPTIRYLIESGA-KVVIGTHQGKPYSED---YTTTEEHARVLSE 78 (410)
1324 T ss_dssp BGGGSCCTTCEEEEECCCCCCEETTEECCCHHHHHTHHHHHHHHHTTC-EEEEECCCSCTTCTT---CCCSHHHHHHHHH
1325 T ss_pred ccccccCCCCEEEEEeeCCCcccCCCCCCcHHHHHHHHHHHHHHHCCC-cEEEEeccCCCCCCC---CCCHHHHHHHHHH
1326 Confidence 456678999999999999999998899999999999999999999999 599999999998753 6899999999999
1327
1328
1329 Q NP_000282.1 88 LLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFG 167 (417)
1330 Q Consensus 88 ~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~LA~l~DiyVNDAFg 167 (417)
1331 +|+.+|.|+++|+|+++.+.++.+++|+|+||||+|||++|++++++ +++++..|++.||+++|+||||||+
1332 T Consensus 79 ~l~~~v~f~~~~~g~~~~~~i~~~~~g~illLENlRF~~~E~~~~~~--------~~~~~~~fa~~La~l~DiyVnDAF~ 150 (410)
1333 T 2CUN_A 79 LLDQHVEYIEDIFGRYAREKIKELKSGEVAILENLRFSAEEVKNKPI--------EECEKTFLVKKLSKVIDYVVNDAFA 150 (410)
1334 T ss_dssp HHTSCEEECSCSSSHHHHHHHHTCCTTCEEECSCGGGBTTTTSCCCH--------HHHTTSHHHHHHHTTCSEEEECCGG
1335 T ss_pred HHcCcEEehhhccChhHHHHHHHccCCCEEEEeccccchhHhcCCCh--------hHhHHHHHHHHHhccCCEEEecccc
1336 Confidence 99877999999999888888899999999999999999977643110 0112356999999999999999999
1337
1338
1339 Q NP_000282.1 168 TAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLD--KVNEMIIGGGMAFT 243 (417)
1340 Q Consensus 168 ~aHR~~aS~~gi~--l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~--~~D~iligG~~a~t 243 (417)
1341 ++||.|||+++++ +| ++||++|++||++|++++++|+||+++|+||+|++||+++|++|++ +||.|++||+||++
1342 T Consensus 151 ~~HR~~aS~vgi~~~lp-s~aG~l~~kEl~~L~~~~~~p~rP~v~IlGG~KvsdKi~li~~Ll~~~~vD~IligG~~a~~ 229 (410)
1343 T 2CUN_A 151 TAHRSQPSLVGFARIKP-MIMGFLMEKEIEALMRAYYSKDSPKIYVLGGAKVEDSLKVVENVLRRERADLVLTGGLVANV 229 (410)
1344 T ss_dssp GTTCCCHHHHTTTTTSC-EEECHHHHHHHHHHHHHHTCCCSCEEEEECSSCHHHHHHHHHHHHHTTSCSEEEECHHHHHH
1345 T ss_pred cccCCCcchhhHHhhch-HHhcHHHHHHHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHHHHHhCCEEEEchhHHHH
1346 Confidence 9999999999998 66 8999999999999999999999999999999999999999999996 78999999999999
1347
1348
1349 Q NP_000282.1 244 FLKVLNNMEIGTSLFDEE-------GAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDC 316 (417)
1350 Q Consensus 244 fl~a~~g~~ig~s~~e~~-------~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DI 316 (417)
1351 ||+|+ |+++|+|++|++ ..+.|+++++. ++++|++|+||+|.++... ...........+|++|+++||
1352 T Consensus 230 fL~a~-g~~ig~s~~e~~~~~~~~~~~~~a~~il~~---~~~~I~lPvD~~v~~~~~~-~~~~~~~~~~~ip~~~~~~DI 304 (410)
1353 T 2CUN_A 230 FTLAK-GFDLGRKNVEFMKKKGLLDYVKHAEEILDE---FYPYIRTPVDFAVDYKGER-VEIDLLSENRGLLHQYQIMDI 304 (410)
1354 T ss_dssp HHHHH-TCCCCHHHHHHHHTTTGGGGHHHHHHHHHH---HGGGEECCSEEEEEETTEE-EEEESSSGGGGGGGTSCEEEE
1355 T ss_pred HHHHc-CCCCCcchHHHhHhhCHHHHHHHHHHHHHH---HCCccccceeEEecCCCCc-ceeeeeccccCCCCCceeecC
1356 Confidence 99998 899999987763 34555555542 6889999999999886432 111011122478899999999
1357
1358
1359 Q NP_000282.1 317 GPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGG 396 (417)
1360 Q Consensus 317 Gp~Ti~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vStgG 396 (417)
1361 ||+|++.|+++|++|||||||||||+||+++|++||++++++++++ ++++|+|||||+++++++|+. +++||||||
1362 T Consensus 305 Gp~Ti~~~~~~I~~aktI~wnGP~G~~E~e~f~~GT~~i~~ai~~~---~a~~vvGGGdT~~~~~~~g~~-~~s~vStgG 380 (410)
1363 T 2CUN_A 305 GKRTAEKYREILMKARIIVANGPMGVFEREEFAIGTVEVFKAIADS---PAFSVLGGGHSIASIQKYGIT-GITHISTGG 380 (410)
1364 T ss_dssp CHHHHHHHHHHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHS---SSEEEEECGGGGGGGGGSCCC-CCSEECSCS
1365 T ss_pred CHHHHHHHHHHHhhCCEEEEeCCCCcccchhhchhHHHHHHHHHcC---CCEEEEecHHHHHHHHHhCCC-CcEEEEecc
1366 Confidence 9999999999999999999999999999888999999999999763 689999999999999888875 799999999
1367
1368
1369 Q NP_000282.1 397 GASLELLEGKVLPGVDALSN 416 (417)
1370 Q Consensus 397 gA~Le~L~G~~LPgl~aL~~ 416 (417)
1371 ||+||||+|+.||||++|++
1372 T Consensus 381 gA~Le~L~G~~LPgl~aL~~ 400 (410)
1373 T 2CUN_A 381 GAMLSFFAGEELPVLRALQI 400 (410)
1374 T ss_dssp HHHHHHHTTCCCHHHHHHHH
1375 T ss_pred hHHHHHHcCCCChHHHHHHH
1376 Confidence 99999999999999999975
1377
1378
1379 No 22
1380 >1FW8_A PHOSPHOGLYCERATE KINASE (E.C.2.7.2.3); phosphotransferase, kinase, phosphoglycerate kinase, glycolysis; HET: GOL; 2.3A {Saccharomyces cerevisiae} SCOP: c.86.1.1
1381 Probab=100.00 E-value=8.8e-90 Score=698.26 Aligned_cols=342 Identities=68% Similarity=1.065 Sum_probs=299.2 Template_Neff=6.400
1382
1383 Q NP_000282.1 74 DKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRAS 153 (417)
1384 Q Consensus 74 ~~~Sl~~va~~L~~~l~~~v~f~~~~~~~~~~~~~~~l~~g~i~lLENlRf~~~E~~~~~~~~~~~~~~~~~~~~~fa~~ 153 (417)
1385 +.+||+||+++|+++|+.+|.|+++|+|+++.+.++.+++|+|+||||+|||++|+++.++ ++.+.+++++++.+|++.
1386 T Consensus 2 ~~~Sl~pva~~L~~ll~~~V~f~~d~~g~~~~~~i~~~~~g~IllLENlRF~~~E~~~~~~-n~~~~~~~~~~~~~fa~~ 80 (416)
1387 T 1FW8_A 2 SKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKV-DGQKVKASKEDVQKFRHE 80 (416)
1388 T ss_dssp CTTCSHHHHHHHHHHHTSCEEECSCSSSHHHHHHHHTSCTTEEEECCCGGGSHHHHSEEEE-TTEEEECCHHHHHHHHHH
1389 T ss_pred CCccHHHHHHHHHHHHCCceeeccCCCCHHHHHHHHhcCCCCEEEEecceecccccccccc-CCcccccCHHHHHHHHHH
1390 Confidence 3689999999999999877999999999888888899999999999999999977632100 000001112234789999
1391
1392
1393 Q NP_000282.1 154 LSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNE 233 (417)
1394 Q Consensus 154 LA~l~DiyVNDAFg~aHR~~aS~~gi~l~~~~aG~ll~kEl~~l~~~l~~p~rP~v~IiGGaKv~dKi~~i~~Ll~~~D~ 233 (417)
1395 ||+++|+|||||||++||.|||++++++|+++||++|++||++|++++++|+||+++|+||+|++||+++|++|+++||.
1396 T Consensus 81 La~l~diyVnDAFg~~HR~~aS~vgi~lp~s~aG~ll~kEi~~L~kil~~p~rP~v~IlGGaKv~dKi~~i~~Ll~~~D~ 160 (416)
1397 T 1FW8_A 81 LSSLADVYINDAFGTAHRAHSSMVGFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDS 160 (416)
1398 T ss_dssp HHTTCSEEEECCGGGTTSCCHHHHCCCCSCEEECHHHHHHHHHHHHHHHSCCSSEEEEEECSCSTTTHHHHHHHHTTCSE
1399 T ss_pred HHhhCCeEeecccccCCccccCcccCCCchhhhcHHHHHHHHHHHHHhhCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCE
1400 Confidence 99999999999999999999999999976589999999999999999999999999999999999999999999999999
1401
1402
1403 Q NP_000282.1 234 MIIGGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMG 313 (417)
1404 Q Consensus 234 iligG~~a~tfl~a~~g~~ig~s~~e~~~~~~a~~il~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~ 313 (417)
1405 |++||+|||+||+|++++++|+|++|++..+.|++++++|+.++++|+||+|++|.+.+..+.....+...+.+|++|++
1406 T Consensus 161 IligG~~a~tfL~a~~~~~iG~S~~e~~~~~~a~~il~~a~~~~~ki~LP~D~vv~~~~~~~~~~~~~~~~~~i~~~~~i 240 (416)
1407 T 1FW8_A 161 IIIGGGMAFTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQG 240 (416)
1408 T ss_dssp EEEEGGGHHHHHHHHSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEEECCSEEEEESSSSTTCCEEEEETTTCCCTTCEE
1409 T ss_pred EEeCchHHHHHHHHhCCCccCccccchhhhhHHHHHHHHHHHcCCeEEeeeeEEEeccccCCCCCceeeccCCCCCCCcc
1410 Confidence 99999999999999755689999999988999999999988999999999999998865322211111122378899999
1411
1412
1413 Q NP_000282.1 314 LDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVS 393 (417)
1414 Q Consensus 314 ~DIGp~Ti~~~~~~I~~aktI~WnGp~G~~E~~~f~~GT~~l~~al~~~~~~~~~~ivGGGdT~~~~~~~g~~~~~~~vS 393 (417)
1415 +||||+|++.|.+.|++|||||||||||+||.++|++||+++++++++++.+++++|+|||||+++++++|+.++++|||
1416 T Consensus 241 lDIGp~Ti~~~~~~I~~aktI~wnGP~G~~E~~~f~~GT~~i~~ai~~~~~~~a~~ivGGGdT~~~~~~~g~~~~~s~vS 320 (416)
1417 T 1FW8_A 241 LDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVS 320 (416)
1418 T ss_dssp EEECHHHHHHHHHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECTTHHHHHHHHTTCGGGSSEEC
1419 T ss_pred cccCHHHHHHHHHHHHcCCEEEEcCCCCcccccccChHHHHHHHHHHHHhcCCCeEEEechhHHHHHHHhCCCCCceEEe
1420 Confidence 99999999999999999999999999999998889999999999997632236899999999999998889878899999
1421
1422
1423 Q NP_000282.1 394 TGGGASLELLEGKVLPGVDALSN 416 (417)
1424 Q Consensus 394 tgGgA~Le~L~G~~LPgl~aL~~ 416 (417)
1425 |||||+||||+|+.||||++|++
1426 T Consensus 321 TGGGA~Le~L~Gk~LPgieaL~~ 343 (416)
1427 T 1FW8_A 321 TGGGASLELLEGKELPGVAFLSE 343 (416)
1428 T ss_dssp SCSHHHHHHHTTCCCHHHHTSCS
1429 T ss_pred cCchHHHHHHcCCCCCceeehhh
1430 Confidence 99999999999999999999985
1431
1432
1433 No 23
1434 >1FW8_A PHOSPHOGLYCERATE KINASE (E.C.2.7.2.3); phosphotransferase, kinase, phosphoglycerate kinase, glycolysis; HET: GOL; 2.3A {Saccharomyces cerevisiae} SCOP: c.86.1.1
1435 Probab=99.28 E-value=3.2e-16 Score=156.69 Aligned_cols=68 Identities=57% Similarity=0.940 Sum_probs=61.4 Template_Neff=6.400
1436
1437 Q NP_000282.1 3 LSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGV 70 (417)
1438 Q Consensus 3 ~~~~~~i~~~~l~gK~VlvRvD~NVPl~~~~i~d~~RI~~~lpTI~~Ll~~gak~vil~SHlGRP~g~ 70 (417)
1439 ++.++++++.+++|||||||+|+|||+++++|.|++||++++|||+||+++||++||++||+|||+++
1440 T Consensus 347 ~~~~~~~~~~~~~~k~vl~R~D~nvp~~~~~i~d~~Ri~~~~~ti~~l~~~~~~~vii~sH~grp~~~ 414 (416)
1441 T 1FW8_A 347 LSSKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGRPNGE 414 (416)
1442 T ss_dssp SSCSCBGGGSCCTTCEEEEECCCCCCBSSSSBSCTHHHHHHHHHHHHHHHTCCSEEEEECCCSCCCSS
1443 T ss_pred ccccccccccccCCCEEEEEeecCCCCCCCCcCCCHHHHhHHHHHHHHHHcCCCEEEEeeccCCCCCC
1444 Confidence 45567777788999999999999999988899999999999999999999998449999999999875
1445
1446
1447 No 24
1448 >2Q33_B D-MONELLIN CHAIN A, D-MONELLIN CHAIN; ALPHA/BETA, ALL-D PROTEIN, DE NOVO; 1.8A {N/A}
1449 Probab=34.33 E-value=5.9 Score=24.60 Aligned_cols=11 Identities=36% Similarity=0.761 Sum_probs=9.2 Template_Neff=1.000
1450
1451 Q NP_000282.1 310 GWMGLDCGPES 320 (417)
1452 Q Consensus 310 ~~~~~DIGp~T 320 (417)
1453 .|.++||||-|
1454 T Consensus 2 eweiidigpft 12 (48)
1455 T 2Q33_B 2 EWEIIDIGPFT 12 (48)
1456 Confidence 58899999955
1457
1458
1459 Query NP_000290.2
1460 Match_columns 747
1461 No_of_seqs 3849 out of 40250
1462 Neff 6.23432
1463 Searched_HMMs 998
1464 Date Fri Jul 24 20:45:58 2020
1465 Command /home/guerler/hh-suite/build/bin/hhblits -i /home/guerler/human/fasta/NP_00/NP_000290.2.fasta -d /home/guerler/pdb70/pdb70 -o /home/guerler/human/hhr/NP_00/NP_000290.2.hhr
1466
1467 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1468 1 1XM9_A plakophilin 1 Plakophi 99.7 6.3E-22 7.3E-26 206.9 0.0 453 246-719 3-455 (457)
1469 2 3L6X_A Catenin delta-1, E-cadh 99.4 1.1E-17 1.2E-21 185.5 0.0 438 245-729 48-492 (584)
1470 3 5D5K_C Importin subunit alpha- 98.6 1.1E-11 1.4E-15 126.2 0.0 369 243-713 11-386 (466)
1471 4 3NMZ_A APC variant protein, Rh 98.6 1.3E-11 1.4E-15 129.0 0.0 381 238-715 25-452 (458)
1472 5 4UAF_B Importin alpha 1 import 98.5 1.3E-11 1.6E-15 125.7 0.0 369 243-713 11-386 (466)
1473 6 4U5L_A deltaIBB-importin-alpha 98.5 1.7E-11 2E-15 123.0 0.0 360 246-712 49-425 (426)
1474 7 6SA7_B DARPin-Armadillo fusion 98.5 2.5E-11 2.9E-15 127.0 0.0 136 244-380 172-309 (510)
1475 8 4RV1_D Engineered Protein OR49 98.5 2.7E-11 3.2E-15 120.8 0.0 362 247-715 4-369 (420)
1476 9 6S9O_F designed Armadillo repe 98.5 2.8E-11 3.3E-15 117.9 0.0 167 545-724 170-338 (344)
1477 10 5MFD_C YIIIM''6AII, Capsid dec 98.5 3E-11 3.5E-15 116.2 0.0 318 246-712 5-326 (328)
1478 11 4MZ6_E Deoxyuridine 5'-triphos 98.5 3.5E-11 4E-15 125.0 0.0 368 244-713 56-430 (509)
1479 12 5UMZ_B Importin subunit alpha- 98.5 3.5E-11 4E-15 125.0 0.0 368 244-713 56-430 (509)
1480 13 2JDQ_A IMPORTIN ALPHA-1 SUBUNI 98.4 3.6E-11 4.2E-15 122.1 0.0 367 244-716 19-393 (450)
1481 14 4E4V_A Importin subunit alpha- 98.4 3.6E-11 4.2E-15 124.3 0.0 364 246-716 76-456 (485)
1482 15 4B18_A IMPORTIN SUBUNIT ALPHA- 98.4 4E-11 4.7E-15 121.6 0.0 368 244-717 16-391 (447)
1483 16 4XZR_B Heh1-NLS, Kap60; karyop 98.4 4.3E-11 5E-15 119.8 0.0 363 248-717 4-375 (423)
1484 17 5XZX_A Importin subunit alpha- 98.4 4.3E-11 5.1E-15 119.5 0.0 133 247-380 4-140 (416)
1485 18 1JDH_A BETA-CATENIN, hTcf-4; B 98.4 4.4E-11 5.2E-15 123.9 0.0 378 245-726 101-502 (529)
1486 19 3IFQ_A plakoglobin, E-cadherin 98.4 4.5E-11 5.3E-15 124.5 0.0 381 246-726 104-503 (553)
1487 20 4UAD_A Importin alpha import a 98.4 6E-11 7E-15 121.8 0.0 372 246-723 68-456 (479)
1488 21 5ZHX_D Rap1 GTPase-GDP dissoci 98.4 6.3E-11 7.5E-15 120.9 0.0 407 246-727 19-458 (487)
1489 22 1EE4_A KARYOPHERIN ALPHA; ARM 98.4 8.2E-11 9.6E-15 117.7 0.0 364 247-717 3-375 (423)
1490 23 1EE4_B KARYOPHERIN ALPHA; ARM 98.4 8.2E-11 9.6E-15 117.7 0.0 364 247-717 3-375 (423)
1491 24 4EV8_A Catenin beta-1; mouse c 98.3 9.8E-11 1.2E-14 121.5 0.0 382 246-727 103-504 (538)
1492 25 4RXH_B Importin subunit alpha, 98.3 1.1E-10 1.2E-14 121.7 0.0 365 246-716 72-457 (495)
1493 26 4BQK_A IMPORTIN SUBUNIT ALPHA- 98.3 1.2E-10 1.3E-14 118.5 0.0 366 246-716 46-427 (456)
1494 27 6BW9_A Importin subunit alpha- 98.3 1.3E-10 1.5E-14 118.5 0.0 366 246-717 53-428 (459)
1495 28 1WA5_B GTP-BINDING NUCLEAR PRO 98.3 1.9E-10 2.2E-14 121.4 0.0 134 245-379 173-308 (530)
1496 29 5XGC_A Rap1 GTPase-GDP dissoci 98.3 2E-10 2.3E-14 117.7 0.0 409 246-729 35-476 (503)
1497 30 4BPL_A IMPORTIN SUBUNIT ALPHA- 98.2 2.4E-10 2.9E-14 115.9 0.0 367 246-717 44-426 (454)
1498 31 4B8J_A IMPORTIN SUBUNIT ALPHA- 98.2 2.6E-10 2.9E-14 120.0 0.0 367 246-717 118-500 (528)
1499 32 5T94_B Guanine nucleotide exch 98.2 2.9E-10 3.3E-14 120.5 0.0 364 246-716 131-513 (542)
1500 33 4TNM_A Importin-alpha3 / MOS6; 98.2 3.2E-10 3.7E-14 119.6 0.0 369 246-719 119-504 (531)
1501 34 5TBK_C Importin subunit alpha- 98.2 3.4E-10 3.8E-14 119.3 0.0 366 245-716 71-443 (521)
1502 35 5TBK_D Importin subunit alpha- 98.2 3.4E-10 3.8E-14 119.3 0.0 366 245-716 71-443 (521)
1503 36 2Z6G_A B-catenin; Full-Length, 98.1 6.4E-10 6.8E-14 126.7 0.0 381 245-725 234-634 (780)
1504 37 1JDH_A BETA-CATENIN, hTcf-4; B 98.1 6.1E-10 7.2E-14 115.0 0.0 326 286-717 16-343 (529)
1505 38 2Z6H_A Catenin beta-1; Beta-Ca 98.1 7.3E-10 8.1E-14 121.3 0.0 378 246-673 99-530 (644)
1506 39 6SA8_A ring-like DARPin-Armadi 98.1 7.7E-10 8.7E-14 121.2 0.0 342 244-691 177-522 (671)
1507 40 4RXH_B Importin subunit alpha, 98.1 1.2E-09 1.4E-13 113.4 0.0 157 545-714 196-354 (495)
1508 41 5XJG_A Vacuolar protein 8, Nuc 98.0 1.3E-09 1.5E-13 111.8 0.0 133 246-380 159-293 (506)
1509 42 6KBM_A Vacuolar protein 8, Aut 98.0 1.3E-09 1.5E-13 111.8 0.0 133 246-380 159-293 (506)
1510 43 4TNM_A Importin-alpha3 / MOS6; 98.0 2E-09 2.3E-13 113.3 0.0 158 545-714 243-402 (531)
1511 44 6KBN_A Vacuolar protein 8, Aut 98.0 2.1E-09 2.5E-13 112.9 0.0 133 246-380 153-287 (563)
1512 45 6KBN_C Vacuolar protein 8, Aut 98.0 2.1E-09 2.5E-13 112.9 0.0 133 246-380 153-287 (563)
1513 46 4EV8_A Catenin beta-1; mouse c 98.0 2.1E-09 2.5E-13 111.1 0.0 323 286-716 17-343 (538)
1514 47 4BPL_A IMPORTIN SUBUNIT ALPHA- 98.0 2.2E-09 2.5E-13 108.6 0.0 158 545-714 168-327 (454)
1515 48 4PLS_B Arm00010; PEPTIDE BINDI 98.0 2.5E-09 2.9E-13 100.1 0.0 112 247-359 3-114 (281)
1516 49 5Z8H_A Adenomatous polyposis c 98.0 2.6E-09 3E-13 104.9 0.0 123 258-380 92-219 (339)
1517 50 2Z6H_A Catenin beta-1; Beta-Ca 98.0 2.8E-09 3.1E-13 116.5 0.0 415 246-726 57-499 (644)
1518 51 5AEI_B DESIGNED ARMADILLO REPE 97.9 2.9E-09 3.4E-13 99.9 0.0 114 246-360 5-118 (286)
1519 52 4B8J_A IMPORTIN SUBUNIT ALPHA- 97.9 3.2E-09 3.7E-13 111.3 0.0 160 544-715 199-360 (528)
1520 53 4R10_A Protein humpback-2, Cad 97.9 4.1E-09 4.8E-13 110.8 0.0 417 245-725 73-531 (572)
1521 54 5XJG_A Vacuolar protein 8, Nuc 97.9 4.2E-09 5E-13 107.7 0.0 359 246-716 39-399 (506)
1522 55 6KBM_A Vacuolar protein 8, Aut 97.9 4.2E-09 5E-13 107.7 0.0 359 246-716 39-399 (506)
1523 56 5IZA_A Adenomatous polyposis c 97.9 4.5E-09 5E-13 105.1 0.0 297 236-625 23-335 (354)
1524 57 4R0Z_A Protein humpback-2; arm 97.9 5.4E-09 6.2E-13 112.3 0.0 401 246-718 115-565 (629)
1525 58 4R0Z_A Protein humpback-2; arm 97.9 5.5E-09 6.3E-13 112.2 0.0 418 245-726 73-532 (629)
1526 59 1XM9_A plakophilin 1 Plakophi 97.8 6.1E-09 7E-13 106.4 0.0 350 245-671 44-450 (457)
1527 60 4I2Z_A Protein UNC-45, Heat sh 97.8 7.3E-09 7.1E-13 122.5 0.0 69 247-316 648-716 (961)
1528 61 6SWY_5 Vacuolar import and deg 97.8 7.4E-09 7.2E-13 121.9 0.0 402 240-720 281-784 (921)
1529 62 5IZ8_A Adenomatous polyposis c 97.8 6.6E-09 7.4E-13 103.8 0.0 297 236-625 23-335 (354)
1530 63 3IFQ_A plakoglobin, E-cadherin 97.8 6.4E-09 7.5E-13 107.7 0.0 374 244-725 18-399 (553)
1531 64 4I2W_A Protein UNC-45, Heat sh 97.8 7.9E-09 7.7E-13 122.2 0.0 70 246-316 647-716 (961)
1532 65 4R10_A Protein humpback-2, Cad 97.8 8.7E-09 1E-12 108.2 0.0 398 246-715 115-562 (572)
1533 66 5T94_B Guanine nucleotide exch 97.8 9.3E-09 1.1E-12 108.5 0.0 159 544-715 254-414 (542)
1534 67 6KBN_A Vacuolar protein 8, Aut 97.8 9.2E-09 1.1E-12 107.8 0.0 358 245-714 32-391 (563)
1535 68 6KBN_C Vacuolar protein 8, Aut 97.8 9.2E-09 1.1E-12 107.8 0.0 358 245-714 32-391 (563)
1536 69 2Z6G_A B-catenin; Full-Length, 97.8 1.2E-08 1.3E-12 115.8 0.0 373 244-724 149-529 (780)
1537 70 5EWP_B Uncharacterized protein 97.7 1.3E-08 1.5E-12 96.8 0.0 118 263-381 60-181 (252)
1538 71 5XGC_A Rap1 GTPase-GDP dissoci 97.7 1.3E-08 1.6E-12 103.5 0.0 358 257-715 5-373 (503)
1539 72 6BW9_A Importin subunit alpha- 97.7 1.6E-08 1.9E-12 102.4 0.0 367 244-716 8-381 (459)
1540 73 5D5K_C Importin subunit alpha- 97.7 2E-08 2.4E-12 101.3 0.0 364 246-716 57-437 (466)
1541 74 4UAF_B Importin alpha 1 import 97.6 2.4E-08 2.9E-12 100.7 0.0 364 246-716 57-437 (466)
1542 75 3L6X_A Catenin delta-1, E-cadh 97.6 2.7E-08 2.9E-12 108.4 0.0 364 263-713 26-432 (584)
1543 76 4U5L_A deltaIBB-importin-alpha 97.6 2.9E-08 3.5E-12 98.5 0.0 367 245-713 5-378 (426)
1544 77 4MZ6_E Deoxyuridine 5'-triphos 97.6 3.4E-08 4E-12 101.6 0.0 364 246-716 101-481 (509)
1545 78 5UMZ_B Importin subunit alpha- 97.6 3.4E-08 4E-12 101.6 0.0 364 246-716 101-481 (509)
1546 79 5ZHX_D Rap1 GTPase-GDP dissoci 97.6 3.6E-08 4.2E-12 99.7 0.0 332 282-715 13-357 (487)
1547 80 3NOW_A SD10334p; Armadillo Rep 97.6 3.6E-08 4.2E-12 107.8 0.0 135 244-380 289-431 (810)
1548 81 4EV8_A Catenin beta-1; mouse c 97.5 4.1E-08 4.9E-12 100.9 0.0 137 245-381 267-409 (538)
1549 82 5Z8H_A Adenomatous polyposis c 97.5 4.4E-08 5E-12 95.7 0.0 161 544-716 162-332 (339)
1550 83 3SL9_B Catenin beta-1, B-cell 97.5 4.8E-08 5.5E-12 84.8 0.0 134 245-381 13-150 (167)
1551 84 4E4V_A Importin subunit alpha- 97.5 5E-08 5.7E-12 99.9 0.0 156 546-714 206-363 (485)
1552 85 1WA5_B GTP-BINDING NUCLEAR PRO 97.5 5.1E-08 5.8E-12 102.1 0.0 368 242-716 84-460 (530)
1553 86 1EE4_A KARYOPHERIN ALPHA; ARM 97.5 5.1E-08 6E-12 96.6 0.0 115 245-360 87-201 (423)
1554 87 1EE4_B KARYOPHERIN ALPHA; ARM 97.5 5.1E-08 6E-12 96.6 0.0 115 245-360 87-201 (423)
1555 88 4I2Z_A Protein UNC-45, Heat sh 97.5 6.2E-08 6E-12 114.3 0.0 431 248-725 443-904 (961)
1556 89 5XZX_A Importin subunit alpha- 97.5 6.3E-08 7.4E-12 95.7 0.0 360 246-711 46-415 (416)
1557 90 5MFO_F YIIIM3AIII; Designed ar 97.5 6.9E-08 8.1E-12 85.3 0.0 134 246-380 5-140 (202)
1558 91 3SL9_E Catenin beta-1, B-cell 97.5 7.2E-08 8.3E-12 83.6 0.0 134 245-381 13-150 (167)
1559 92 3NOW_A SD10334p; Armadillo Rep 97.5 7.3E-08 8.5E-12 105.4 0.0 110 247-358 8-120 (810)
1560 93 5MFO_E YIIIM3AIII; Designed ar 97.4 7.9E-08 9.3E-12 84.9 0.0 134 246-380 5-140 (202)
1561 94 4XZR_B Heh1-NLS, Kap60; karyop 97.4 8.1E-08 9.6E-12 95.0 0.0 115 245-360 87-201 (423)
1562 95 3OPB_A SWI5-dependent HO expre 97.4 9.1E-08 9.6E-12 108.6 0.0 168 546-719 544-734 (778)
1563 96 4I2W_A Protein UNC-45, Heat sh 97.4 1E-07 9.8E-12 112.5 0.0 433 247-726 442-905 (961)
1564 97 3TT9_A Plakophilin-2; CELL ADH 97.4 9.1E-08 1E-11 88.5 0.0 221 245-487 8-232 (233)
1565 98 2Z6H_A Catenin beta-1; Beta-Ca 97.4 9.4E-08 1E-11 103.9 0.0 378 241-726 10-395 (644)
1566 99 4U2X_E eVP24, KPNA5C; eVP24, i 97.4 9.4E-08 1.1E-11 83.8 0.0 116 246-362 9-125 (175)
1567 100 4RV1_D Engineered Protein OR49 97.4 9.1E-08 1.1E-11 94.3 0.0 363 246-715 45-411 (420)
1568 101 4BQK_A IMPORTIN SUBUNIT ALPHA- 97.4 9.4E-08 1.1E-11 96.1 0.0 158 545-714 170-329 (456)
1569 102 5TBK_C Importin subunit alpha- 97.4 1E-07 1.2E-11 99.7 0.0 160 544-715 196-357 (521)
1570 103 5TBK_D Importin subunit alpha- 97.4 1E-07 1.2E-11 99.7 0.0 160 544-715 196-357 (521)
1571 104 4U2X_F eVP24, KPNA5C; eVP24, i 97.4 1.2E-07 1.4E-11 83.0 0.0 116 246-362 9-125 (175)
1572 105 4V3Q_A YIII_M4_AII; DE NOVO PR 97.4 1.2E-07 1.4E-11 87.0 0.0 113 247-360 10-122 (247)
1573 106 3NMZ_A APC variant protein, Rh 97.3 1.5E-07 1.7E-11 97.0 0.0 136 245-380 243-389 (458)
1574 107 3L6X_A Catenin delta-1, E-cadh 97.3 1.6E-07 1.7E-11 102.1 0.0 377 246-672 91-522 (584)
1575 108 5MFI_B YIII(Dq.V2)4CqI, (KR)4; 97.3 1.5E-07 1.8E-11 85.8 0.0 113 246-359 5-117 (243)
1576 109 5MFJ_B YIII(Dq.V2)4CqI, (KR)5; 97.3 1.5E-07 1.8E-11 85.8 0.0 113 246-359 5-117 (243)
1577 110 5VOZ_P V-type proton ATPase ca 97.3 2.1E-07 2.1E-11 101.0 0.0 134 246-382 124-281 (478)
1578 111 5D80_H V-type proton ATPase ca 97.3 2.1E-07 2.1E-11 101.0 0.0 134 246-382 124-281 (478)
1579 112 1JDH_A BETA-CATENIN, hTcf-4; B 97.3 1.9E-07 2.2E-11 95.6 0.0 138 245-382 266-409 (529)
1580 113 2Z6G_A B-catenin; Full-Length, 97.3 2.2E-07 2.3E-11 105.1 0.0 353 245-671 276-664 (780)
1581 114 1HO8_A VACUOLAR ATP SYNTHASE S 97.3 2.5E-07 2.5E-11 100.5 0.0 135 245-382 125-283 (480)
1582 115 6S9O_F designed Armadillo repe 97.2 2.9E-07 3.4E-11 88.3 0.0 135 246-381 173-309 (344)
1583 116 1XM9_A plakophilin 1 Plakophi 97.2 3.2E-07 3.6E-11 93.1 0.0 114 246-361 332-451 (457)
1584 117 1XQS_B HSPBP1 protein, Heat sh 97.2 3.3E-07 3.7E-11 87.9 0.0 134 246-380 66-203 (280)
1585 118 5MFI_B YIII(Dq.V2)4CqI, (KR)4; 97.2 3.4E-07 4E-11 83.4 0.0 134 246-380 47-182 (243)
1586 119 5MFJ_B YIII(Dq.V2)4CqI, (KR)5; 97.2 3.4E-07 4E-11 83.4 0.0 134 246-380 47-182 (243)
1587 120 6SA6_A DARPin-Armadillo fusion 97.2 3.9E-07 4.4E-11 91.0 0.0 134 246-380 200-335 (397)
1588 121 6SA8_A ring-like DARPin-Armadi 97.2 4E-07 4.5E-11 98.8 0.0 135 245-380 220-356 (671)
1589 122 1XQR_A HspBP1 protein; armadil 97.1 4.4E-07 4.9E-11 88.9 0.0 134 246-380 82-219 (296)
1590 123 4UAD_A Importin alpha import a 97.1 4.5E-07 5.3E-11 91.8 0.0 368 245-718 23-398 (479)
1591 124 5MFD_C YIIIM''6AII, Capsid dec 97.1 6.1E-07 7.2E-11 84.8 0.0 114 246-360 89-202 (328)
1592 125 6HB3_B Protein HGH1; solenoid 97.1 7E-07 7.2E-11 92.3 0.0 121 246-369 52-208 (369)
1593 126 3OPB_A SWI5-dependent HO expre 97.1 7.2E-07 7.6E-11 100.9 0.0 156 546-711 605-776 (778)
1594 127 4HXT_A De Novo Protein OR329; 97.0 7.7E-07 9.1E-11 80.9 0.0 113 247-360 4-116 (252)
1595 128 3GQ2_A General vesicular trans 97.0 9.1E-07 9.4E-11 98.4 0.0 136 245-381 60-219 (651)
1596 129 3GRL_A General vesicular trans 97.0 9.1E-07 9.4E-11 98.4 0.0 136 245-381 60-219 (651)
1597 130 4HXT_A De Novo Protein OR329; 97.0 8.1E-07 9.6E-11 80.7 0.0 114 246-360 45-158 (252)
1598 131 4PLS_B Arm00010; PEPTIDE BINDI 97.0 8.3E-07 9.9E-11 82.1 0.0 114 246-360 44-157 (281)
1599 132 5IZA_A Adenomatous polyposis c 97.0 9.5E-07 1.1E-10 87.4 0.0 114 245-358 127-246 (354)
1600 133 5IZ8_A Adenomatous polyposis c 97.0 1E-06 1.1E-10 87.2 0.0 113 246-358 128-246 (354)
1601 134 6SA7_B DARPin-Armadillo fusion 97.0 1.1E-06 1.2E-10 90.6 0.0 135 246-381 342-478 (510)
1602 135 4V3Q_A YIII_M4_AII; DE NOVO PR 97.0 1.1E-06 1.3E-10 80.3 0.0 135 245-380 92-228 (247)
1603 136 5Z8H_A Adenomatous polyposis c 96.9 1.2E-06 1.4E-10 85.0 0.0 134 245-379 122-267 (339)
1604 137 5AEI_B DESIGNED ARMADILLO REPE 96.9 1.4E-06 1.7E-10 80.6 0.0 112 246-358 173-284 (286)
1605 138 5IZA_A Adenomatous polyposis c 96.9 1.5E-06 1.7E-10 85.8 0.0 124 258-381 97-225 (354)
1606 139 5IZ8_A Adenomatous polyposis c 96.9 1.6E-06 1.8E-10 85.8 0.0 124 258-381 97-225 (354)
1607 140 3NMZ_A APC variant protein, Rh 96.9 1.6E-06 1.8E-10 88.9 0.0 135 246-381 287-432 (458)
1608 141 6SA7_B DARPin-Armadillo fusion 96.9 1.6E-06 1.9E-10 89.2 0.0 134 246-380 300-435 (510)
1609 142 5TBK_C Importin subunit alpha- 96.9 1.7E-06 1.9E-10 90.0 0.0 367 246-718 115-491 (521)
1610 143 5TBK_D Importin subunit alpha- 96.9 1.7E-06 1.9E-10 90.0 0.0 367 246-718 115-491 (521)
1611 144 6HB1_A Protein HGH1; solenoid 96.9 1.8E-06 1.9E-10 89.0 0.0 169 547-723 51-256 (369)
1612 145 6HB2_D Protein HGH1; solenoid 96.9 1.8E-06 1.9E-10 89.0 0.0 169 547-723 51-256 (369)
1613 146 5MFD_C YIIIM''6AII, Capsid dec 96.8 1.8E-06 2.1E-10 81.5 0.0 114 246-360 47-160 (328)
1614 147 6SA7_B DARPin-Armadillo fusion 96.8 1.8E-06 2.1E-10 88.8 0.0 115 246-361 384-498 (510)
1615 148 6S9O_F designed Armadillo repe 96.8 2.5E-06 2.9E-10 81.5 0.0 115 245-360 46-160 (344)
1616 149 1XM9_A plakophilin 1 Plakophi 96.8 2.5E-06 2.9E-10 86.1 0.0 167 543-716 82-316 (457)
1617 150 4HXT_A De Novo Protein OR329; 96.8 2.5E-06 2.9E-10 77.3 0.0 114 246-360 129-242 (252)
1618 151 6SA6_A DARPin-Armadillo fusion 96.7 3E-06 3.4E-10 84.2 0.0 132 248-380 160-293 (397)
1619 152 3NMZ_A APC variant protein, Rh 96.7 3.3E-06 3.7E-10 86.5 0.0 135 246-380 190-340 (458)
1620 153 6HB1_A Protein HGH1; solenoid 96.6 5.3E-06 5.5E-10 85.4 0.0 93 287-381 9-108 (369)
1621 154 6HB2_D Protein HGH1; solenoid 96.6 5.3E-06 5.5E-10 85.4 0.0 93 287-381 9-108 (369)
1622 155 2W3C_A GENERAL VESICULAR TRANS 96.6 5.7E-06 5.9E-10 90.0 0.0 135 246-381 71-213 (577)
1623 156 4XZR_B Heh1-NLS, Kap60; karyop 96.6 5.2E-06 6.2E-10 81.4 0.0 114 246-360 172-285 (423)
1624 157 3TT9_A Plakophilin-2; CELL ADH 96.6 6E-06 6.8E-10 75.6 0.0 136 246-382 53-206 (233)
1625 158 6HB3_B Protein HGH1; solenoid 96.6 6.6E-06 6.8E-10 84.6 0.0 93 287-381 9-108 (369)
1626 159 6SA8_A ring-like DARPin-Armadi 96.5 6.4E-06 7.1E-10 88.9 0.0 322 286-714 177-502 (671)
1627 160 1EE4_A KARYOPHERIN ALPHA; ARM 96.5 6.8E-06 8.1E-10 80.5 0.0 114 246-360 214-327 (423)
1628 161 1EE4_B KARYOPHERIN ALPHA; ARM 96.5 6.8E-06 8.1E-10 80.5 0.0 114 246-360 214-327 (423)
1629 162 5KC2_B Phosphatidylinositol 3- 96.5 9.9E-06 1E-09 98.5 0.0 150 546-715 618-768 (1454)
1630 163 4B18_A IMPORTIN SUBUNIT ALPHA- 96.4 8.9E-06 1E-09 80.7 0.0 366 245-716 61-443 (447)
1631 164 1JDH_A BETA-CATENIN, hTcf-4; B 96.4 9E-06 1.1E-09 82.5 0.0 363 245-712 143-529 (529)
1632 165 5MFI_B YIII(Dq.V2)4CqI, (KR)4; 96.4 9.2E-06 1.1E-09 73.3 0.0 135 245-380 88-224 (243)
1633 166 5MFJ_B YIII(Dq.V2)4CqI, (KR)5; 96.4 9.2E-06 1.1E-09 73.3 0.0 135 245-380 88-224 (243)
1634 167 4MFU_A Beta-catenin-like prote 96.4 1.1E-05 1.1E-09 87.3 0.0 182 539-725 60-261 (490)
1635 168 5AEI_B DESIGNED ARMADILLO REPE 96.4 1E-05 1.2E-09 74.6 0.0 134 246-380 89-224 (286)
1636 169 4PLS_B Arm00010; PEPTIDE BINDI 96.4 1.1E-05 1.3E-09 74.1 0.0 111 246-357 170-280 (281)
1637 170 4HM9_A Beta-catenin-like prote 96.4 1.4E-05 1.3E-09 88.6 0.0 181 539-725 138-339 (568)
1638 171 3L6X_A Catenin delta-1, E-cadh 96.4 1.3E-05 1.4E-09 86.3 0.0 135 246-381 236-406 (584)
1639 172 4U5L_A deltaIBB-importin-alpha 96.4 1.2E-05 1.4E-09 78.7 0.0 134 246-380 223-359 (426)
1640 173 2JDQ_A IMPORTIN ALPHA-1 SUBUNI 96.3 1.3E-05 1.5E-09 79.6 0.0 366 245-716 64-446 (450)
1641 174 3GQ2_A General vesicular trans 96.3 1.5E-05 1.5E-09 88.2 0.0 169 543-721 204-403 (651)
1642 175 3GRL_A General vesicular trans 96.3 1.5E-05 1.5E-09 88.2 0.0 169 543-721 204-403 (651)
1643 176 3TT9_A Plakophilin-2; CELL ADH 96.3 1.5E-05 1.7E-09 72.9 0.0 113 246-360 95-230 (233)
1644 177 5D5K_C Importin subunit alpha- 96.3 1.5E-05 1.8E-09 79.2 0.0 113 246-359 273-386 (466)
1645 178 4UAF_B Importin alpha 1 import 96.3 1.6E-05 1.8E-09 79.1 0.0 113 246-359 273-386 (466)
1646 179 2JDQ_A IMPORTIN ALPHA-1 SUBUNI 96.2 1.8E-05 2.2E-09 78.4 0.0 134 246-380 235-371 (450)
1647 180 3IFQ_A plakoglobin, E-cadherin 96.2 1.8E-05 2.2E-09 80.6 0.0 367 245-716 145-534 (553)
1648 181 4BQK_A IMPORTIN SUBUNIT ALPHA- 96.2 1.9E-05 2.2E-09 78.5 0.0 116 245-360 172-287 (456)
1649 182 4U5L_A deltaIBB-importin-alpha 96.2 2.2E-05 2.6E-09 76.7 0.0 115 245-360 180-294 (426)
1650 183 4BPL_A IMPORTIN SUBUNIT ALPHA- 96.2 2.3E-05 2.7E-09 77.8 0.0 135 245-379 170-306 (454)
1651 184 4MZ6_E Deoxyuridine 5'-triphos 96.1 2.6E-05 3.1E-09 79.0 0.0 113 246-359 317-430 (509)
1652 185 5UMZ_B Importin subunit alpha- 96.1 2.6E-05 3.1E-09 79.0 0.0 113 246-359 317-430 (509)
1653 186 4E4V_A Importin subunit alpha- 96.1 2.7E-05 3.1E-09 78.7 0.0 113 246-359 292-405 (485)
1654 187 3GQ2_A General vesicular trans 96.1 3.4E-05 3.5E-09 85.2 0.0 176 543-726 56-255 (651)
1655 188 3GRL_A General vesicular trans 96.1 3.4E-05 3.5E-09 85.2 0.0 176 543-726 56-255 (651)
1656 189 4V3Q_A YIII_M4_AII; DE NOVO PR 96.0 3.4E-05 4E-09 69.7 0.0 112 246-358 135-246 (247)
1657 190 4TNM_A Importin-alpha3 / MOS6; 96.0 3.5E-05 4E-09 79.5 0.0 136 245-380 245-382 (531)
1658 191 4GMO_A Putative uncharacterize 95.9 5.4E-05 5.2E-09 85.2 0.0 94 245-339 34-129 (684)
1659 192 4PLS_B Arm00010; PEPTIDE BINDI 95.9 4.9E-05 5.8E-09 69.4 0.0 134 246-380 86-221 (281)
1660 193 5MFO_F YIIIM3AIII; Designed ar 95.9 5E-05 5.9E-09 65.8 0.0 112 246-358 89-200 (202)
1661 194 2RU4_A Armadillo Repeat Protei 95.9 5.2E-05 6E-09 59.8 0.0 110 248-358 4-113 (115)
1662 195 5AEI_B DESIGNED ARMADILLO REPE 95.9 5.1E-05 6.1E-09 69.5 0.0 114 246-360 47-160 (286)
1663 196 5MFD_C YIIIM''6AII, Capsid dec 95.9 5.1E-05 6.1E-09 70.8 0.0 157 545-714 128-286 (328)
1664 197 5MFO_E YIIIM3AIII; Designed ar 95.9 5.2E-05 6.2E-09 65.7 0.0 112 246-358 89-200 (202)
1665 198 5D5K_C Importin subunit alpha- 95.8 5.5E-05 6.5E-09 74.9 0.0 158 544-714 138-302 (466)
1666 199 1XQS_B HSPBP1 protein, Heat sh 95.8 5.9E-05 6.6E-09 71.4 0.0 116 246-362 109-225 (280)
1667 200 4UAF_B Importin alpha 1 import 95.8 5.9E-05 7E-09 74.7 0.0 158 544-714 138-302 (466)
1668 201 1XQR_A HspBP1 protein; armadil 95.8 6.4E-05 7E-09 72.7 0.0 116 246-362 125-241 (296)
1669 202 6CRI_R Bone marrow stromal ant 95.8 6.2E-05 7.1E-09 78.2 0.0 151 547-721 414-577 (585)
1670 203 6SA8_A ring-like DARPin-Armadi 95.8 6.8E-05 7.7E-09 80.4 0.0 136 245-381 262-399 (671)
1671 204 5WBJ_A Regulatory-associated p 95.8 8.1E-05 7.9E-09 89.5 0.0 168 541-715 500-672 (1287)
1672 205 5Z8H_A Adenomatous polyposis c 95.7 7.4E-05 8.5E-09 71.6 0.0 115 246-361 210-331 (339)
1673 206 5WBK_A Regulatory-associated p 95.7 9.2E-05 9E-09 89.0 0.0 168 541-715 500-672 (1287)
1674 207 6SA6_A DARPin-Armadillo fusion 95.7 8.4E-05 9.6E-09 73.2 0.0 135 245-380 241-377 (397)
1675 208 2W3C_A GENERAL VESICULAR TRANS 95.6 0.00012 1.2E-08 79.1 0.0 136 246-382 9-168 (577)
1676 209 6CRI_I Bone marrow stromal ant 95.6 0.0001 1.2E-08 74.8 0.0 106 244-360 72-177 (570)
1677 210 1QBK_B STRUCTURE OF THE KARYOP 95.6 0.00011 1.3E-08 79.3 0.0 157 547-715 667-824 (890)
1678 211 4P6Z_G BST2/tetherin, HIV-1 Vp 95.6 0.00012 1.3E-08 77.7 0.0 151 547-721 431-594 (627)
1679 212 5MFI_B YIII(Dq.V2)4CqI, (KR)4; 95.5 0.00014 1.6E-08 65.0 0.0 112 246-358 131-242 (243)
1680 213 5MFJ_B YIII(Dq.V2)4CqI, (KR)5; 95.5 0.00014 1.6E-08 65.0 0.0 112 246-358 131-242 (243)
1681 214 5EWP_B Uncharacterized protein 95.4 0.00015 1.7E-08 67.3 0.0 134 246-380 87-233 (252)
1682 215 4V3Q_A YIII_M4_AII; DE NOVO PR 95.4 0.00017 2E-08 64.8 0.0 134 246-380 51-186 (247)
1683 216 3GQ2_A General vesicular trans 95.3 0.00022 2.3E-08 78.3 0.0 135 246-381 123-265 (651)
1684 217 3GRL_A General vesicular trans 95.3 0.00022 2.3E-08 78.3 0.0 135 246-381 123-265 (651)
1685 218 5AFF_A SYMPORTIN 1, RIBOSOMAL 95.2 0.00026 2.6E-08 78.8 0.0 94 245-339 12-107 (654)
1686 219 6QH5_B AP-2 complex subunit al 95.2 0.00023 2.7E-08 73.0 0.0 107 243-360 84-190 (592)
1687 220 3C2G_A Sys-1 protein, Pop-1 8- 95.2 0.00033 2.8E-08 77.7 0.0 189 260-486 185-412 (619)
1688 221 4FDD_A Transportin-1, RNA-bind 95.1 0.00028 3.3E-08 75.3 0.0 157 547-715 629-786 (852)
1689 222 4P6Z_B BST2/tetherin, HIV-1 Vp 95.0 0.00031 3.6E-08 72.5 0.0 106 244-360 101-206 (600)
1690 223 2JKT_A AP-2 COMPLEX SUBUNIT AL 95.0 0.00032 3.7E-08 73.5 0.0 144 547-714 441-590 (623)
1691 224 5IZ8_A Adenomatous polyposis c 95.0 0.00036 4.1E-08 67.8 0.0 162 543-716 166-337 (354)
1692 225 5IZA_A Adenomatous polyposis c 94.9 0.00036 4.1E-08 67.8 0.0 162 543-716 166-337 (354)
1693 226 5YVI_A Transportin-1, RNA-bind 94.9 0.00036 4.3E-08 74.5 0.0 156 547-714 645-801 (868)
1694 227 6QH7_A AP-2 complex subunit al 94.9 0.00038 4.3E-08 73.0 0.0 108 242-360 108-217 (621)
1695 228 1B3U_A PROTEIN PHOSPHATASE PP2 94.9 0.0004 4.8E-08 70.1 0.0 146 547-712 441-586 (588)
1696 229 4HM9_A Beta-catenin-like prote 94.8 0.00057 5.4E-08 75.0 0.0 161 543-716 241-424 (568)
1697 230 6QH5_A AP-2 complex subunit al 94.8 0.00048 5.5E-08 72.2 0.0 144 548-715 442-591 (621)
1698 231 5MFO_F YIIIM3AIII; Designed ar 94.7 0.00052 6.2E-08 58.9 0.0 134 246-380 47-182 (202)
1699 232 5MFO_E YIIIM3AIII; Designed ar 94.7 0.00054 6.3E-08 58.8 0.0 134 246-380 47-182 (202)
1700 233 4MFU_A Beta-catenin-like prote 94.6 0.00067 6.6E-08 72.8 0.0 161 543-716 163-346 (490)
1701 234 2NYL_A Protein phosphatase 2, 94.6 0.00059 7.1E-08 68.5 0.0 145 548-712 436-580 (582)
1702 235 4U2X_F eVP24, KPNA5C; eVP24, i 94.4 0.00082 9.5E-08 57.1 0.0 73 246-318 51-124 (175)
1703 236 3SL9_B Catenin beta-1, B-cell 94.3 0.00082 9.5E-08 56.5 0.0 110 246-357 56-166 (167)
1704 237 4I5L_D PP2A A alpha subunit (9 94.3 0.0008 9.6E-08 67.6 0.0 110 246-359 239-349 (584)
1705 238 4U2X_E eVP24, KPNA5C; eVP24, i 94.3 0.00091 1E-07 56.8 0.0 73 246-318 51-124 (175)
1706 239 4UQI_B AP-2 COMPLEX SUBUNIT AL 94.2 0.00095 1.1E-07 70.3 0.0 106 244-360 85-190 (657)
1707 240 5KC2_B Phosphatidylinositol 3- 94.0 0.0013 1.4E-07 79.1 0.0 155 544-715 506-689 (1454)
1708 241 3SL9_E Catenin beta-1, B-cell 94.0 0.0012 1.4E-07 55.4 0.0 110 246-357 56-166 (167)
1709 242 3VWA_B Cytoplasmic export prot 93.8 0.0017 1.8E-07 68.9 0.0 150 546-714 379-529 (560)
1710 243 5DFZ_B Vacuolar protein sortin 93.7 0.0018 1.8E-07 77.7 0.0 155 546-719 608-762 (1460)
1711 244 6HWP_A A3_bGFPD; alphaRep, art 93.7 0.0016 1.9E-07 62.8 0.0 91 245-358 23-113 (409)
1712 245 3TT9_A Plakophilin-2; CELL ADH 93.7 0.0017 1.9E-07 58.2 0.0 169 542-716 47-232 (233)
1713 246 3VWA_A Cytoplasmic export prot 93.6 0.0019 2E-07 68.6 0.0 152 545-715 378-530 (560)
1714 247 1XQR_A HspBP1 protein; armadil 93.6 0.0019 2.1E-07 61.7 0.0 122 257-380 52-177 (296)
1715 248 1XQS_B HSPBP1 protein, Heat sh 93.4 0.0023 2.6E-07 59.7 0.0 123 257-380 36-161 (280)
1716 249 5VOZ_P V-type proton ATPase ca 93.3 0.0027 2.7E-07 67.5 0.0 330 290-714 78-475 (478)
1717 250 5D80_H V-type proton ATPase ca 93.3 0.0027 2.7E-07 67.5 0.0 330 290-714 78-475 (478)
1718 251 1F59_B IMPORTIN BETA-1/FXFG NU 93.3 0.0024 2.8E-07 62.2 0.0 154 549-713 261-437 (442)
1719 252 6XTE_A Importin-5, antipain; h 93.2 0.0025 2.9E-07 70.4 0.0 153 548-714 358-521 (1096)
1720 253 4HXT_A De Novo Protein OR329; 93.2 0.0025 3E-07 56.2 0.0 134 246-380 87-222 (252)
1721 254 5IFE_C Splicing factor 3B subu 93.2 0.0029 3E-07 75.0 0.0 153 548-714 932-1087(1304)
1722 255 6AHD_1 Pre-mRNA-processing-spl 93.2 0.0029 3E-07 75.0 0.0 153 548-714 932-1087(1304)
1723 256 6QH5_B AP-2 complex subunit al 93.1 0.0027 3.1E-07 64.6 0.0 146 548-714 428-573 (592)
1724 257 6EN4_C Splicing factor 3B subu 92.9 0.0031 3.6E-07 67.4 0.0 154 548-714 480-635 (852)
1725 258 6SA6_A DARPin-Armadillo fusion 92.9 0.0032 3.7E-07 61.0 0.0 112 246-358 284-395 (397)
1726 259 6FT5_A A3_A3; alphaRep, artifi 92.9 0.0032 3.7E-07 60.7 0.0 91 245-358 23-113 (409)
1727 260 3C5W_A PP2A A subunit, PP2A C; 92.9 0.0032 3.8E-07 54.7 0.0 146 548-713 86-231 (232)
1728 261 4LAC_A Serine/threonine-protei 92.9 0.0033 3.8E-07 56.3 0.0 110 545-670 31-140 (258)
1729 262 4FDD_A Transportin-1, RNA-bind 92.6 0.0039 4.6E-07 65.8 0.0 150 548-712 360-511 (852)
1730 263 5NR4_A CLIP-associating protei 92.6 0.004 4.6E-07 54.4 0.0 148 548-715 53-200 (230)
1731 264 3C5W_A PP2A A subunit, PP2A C; 92.5 0.0041 4.8E-07 53.9 0.0 107 548-670 8-114 (232)
1732 265 6XU2_A Importin-5, antipain; h 92.5 0.0042 4.9E-07 68.8 0.0 152 548-713 377-539 (1115)
1733 266 4LAC_A Serine/threonine-protei 92.5 0.0043 5E-07 55.5 0.0 146 548-713 112-257 (258)
1734 267 6EN4_C Splicing factor 3B subu 92.5 0.0043 5E-07 66.2 0.0 147 547-714 675-823 (852)
1735 268 1QBK_B STRUCTURE OF THE KARYOP 92.4 0.0043 5.1E-07 66.1 0.0 151 548-713 398-550 (890)
1736 269 6CRI_I Bone marrow stromal ant 92.4 0.0043 5.1E-07 62.1 0.0 145 548-714 415-560 (570)
1737 270 2RU4_B Armadillo Repeat Protei 92.4 0.0045 5.2E-07 45.3 0.0 71 287-358 12-82 (84)
1738 271 4L7M_A Putative uncharacterize 92.3 0.0047 5.5E-07 55.6 0.0 75 545-625 35-109 (269)
1739 272 5WBJ_A Regulatory-associated p 92.2 0.0059 5.8E-07 72.7 0.0 100 561-671 612-725 (1287)
1740 273 5WBK_A Regulatory-associated p 92.2 0.0059 5.8E-07 72.7 0.0 101 560-671 611-725 (1287)
1741 274 2QK2_A LP04448p; Mini spindles 92.2 0.005 5.8E-07 54.5 0.0 145 548-714 16-163 (242)
1742 275 3W3U_A Importin subunit beta-3 92.2 0.005 5.8E-07 67.5 0.0 115 245-360 397-512 (1078)
1743 276 2IW3_B ELONGATION FACTOR 3A; A 92.0 0.0058 6.5E-07 68.1 0.0 148 548-713 176-324 (986)
1744 277 4G3A_B CLIP-associating protei 91.9 0.0059 6.8E-07 54.0 0.0 150 547-714 7-158 (237)
1745 278 5EWP_B Uncharacterized protein 91.9 0.0062 6.9E-07 55.7 0.0 176 528-716 7-209 (252)
1746 279 4QMI_B Cytoskeleton-associated 91.9 0.006 6.9E-07 54.1 0.0 147 548-715 60-208 (240)
1747 280 4QMJ_A Cytoskeleton-associated 91.9 0.006 6.9E-07 54.1 0.0 147 548-715 60-208 (240)
1748 281 5XAH_A Importin-4; Histone, Ch 91.8 0.0062 7.2E-07 58.5 0.0 153 548-714 235-389 (416)
1749 282 5XAH_C Importin-4; Histone, Ch 91.8 0.0062 7.2E-07 58.5 0.0 153 548-714 235-389 (416)
1750 283 2QK1_A Protein STU2; stu2, Stu 91.8 0.0063 7.3E-07 53.8 0.0 152 548-714 17-176 (249)
1751 284 5H2V_A Importin subunit beta-3 91.8 0.0063 7.4E-07 66.7 0.0 114 246-360 398-512 (1078)
1752 285 6OWT_A AP-2 complex subunit al 91.7 0.0072 7.8E-07 67.7 0.0 142 548-713 442-589 (939)
1753 286 2P8Q_A Importin beta-1 subunit 91.7 0.0066 7.8E-07 64.5 0.0 160 548-715 650-829 (876)
1754 287 5MFO_F YIIIM3AIII; Designed ar 91.6 0.0068 8E-07 51.3 0.0 157 546-715 3-161 (202)
1755 288 5MFO_E YIIIM3AIII; Designed ar 91.6 0.007 8.3E-07 51.2 0.0 157 546-715 3-161 (202)
1756 289 2QNA_A Importin subunit beta-1 91.5 0.0073 8.6E-07 62.8 0.0 159 548-714 525-703 (762)
1757 290 6G4J_B Probable serine/threoni 91.5 0.008 8.8E-07 50.6 0.0 132 548-723 15-146 (148)
1758 291 3W3W_A Importin subunit beta-3 91.3 0.0081 9.5E-07 65.7 0.0 98 609-715 821-920 (1078)
1759 292 3ND2_A Importin subunit beta-1 91.2 0.0083 9.8E-07 63.2 0.0 152 548-713 598-763 (861)
1760 293 5OWU_A Importin subunit beta-1 91.2 0.0083 9.8E-07 63.2 0.0 152 548-713 598-763 (861)
1761 294 5DFZ_B Vacuolar protein sortin 91.0 0.011 1.1E-06 70.6 0.0 159 546-714 463-639 (1460)
1762 295 3W3U_A Importin subunit beta-3 90.7 0.011 1.3E-06 64.7 0.0 157 548-713 440-600 (1078)
1763 296 1QGR_A IMPORTIN BETA SUBUNIT, 90.6 0.011 1.3E-06 62.8 0.0 113 246-360 367-480 (876)
1764 297 4QMH_A LP04448p; PROTEIN BINDI 90.4 0.012 1.4E-06 51.8 0.0 149 548-715 58-209 (241)
1765 298 5A1V_E ADP-RIBOSYLATION FACTOR 90.4 0.013 1.4E-06 64.9 0.0 102 244-359 67-168 (874)
1766 299 5NZR_G Coatomer subunit alpha, 90.4 0.013 1.4E-06 64.9 0.0 102 244-359 67-168 (874)
1767 300 3W3W_A Importin subunit beta-3 90.3 0.013 1.5E-06 64.1 0.0 157 547-714 439-601 (1078)
1768 301 5H2V_A Importin subunit beta-3 90.2 0.013 1.5E-06 64.0 0.0 158 547-714 439-601 (1078)
1769 302 4NEE_G AP-2 complex subunit si 90.1 0.014 1.6E-06 56.7 0.0 141 548-714 77-219 (398)
1770 303 6MQ5_A CLIP-associating protei 90.0 0.015 1.7E-06 52.9 0.0 111 548-670 4-120 (257)
1771 304 4UQI_B AP-2 COMPLEX SUBUNIT AL 90.0 0.015 1.7E-06 60.6 0.0 109 245-359 160-268 (657)
1772 305 4XRI_A Importin Beta; Transpor 89.9 0.014 1.7E-06 61.5 0.0 159 548-715 651-826 (882)
1773 306 4NEE_B AP-2 complex subunit si 89.8 0.016 1.8E-06 56.6 0.0 141 548-714 77-219 (398)
1774 307 6EN4_C Splicing factor 3B subu 89.8 0.015 1.8E-06 61.6 0.0 153 548-714 397-551 (852)
1775 308 5A1V_E ADP-RIBOSYLATION FACTOR 89.6 0.018 1.9E-06 63.8 0.0 141 548-714 397-538 (874)
1776 309 5NZR_G Coatomer subunit alpha, 89.6 0.018 1.9E-06 63.8 0.0 141 548-714 397-538 (874)
1777 310 6OWT_A AP-2 complex subunit al 89.5 0.018 2E-06 64.2 0.0 98 250-360 79-178 (939)
1778 311 5KC2_B Phosphatidylinositol 3- 89.3 0.021 2.1E-06 68.3 0.0 151 548-714 424-610 (1454)
1779 312 2P8Q_A Importin beta-1 subunit 89.3 0.018 2.1E-06 60.9 0.0 154 548-714 367-538 (876)
1780 313 2QNA_A Importin subunit beta-1 89.1 0.019 2.3E-06 59.4 0.0 115 245-360 3-122 (762)
1781 314 1IBR_B RAN IMPORTIN BETA SUBU 89.1 0.019 2.3E-06 55.6 0.0 154 548-714 129-289 (462)
1782 315 1QGR_A IMPORTIN BETA SUBUNIT, 88.9 0.021 2.4E-06 60.6 0.0 154 548-714 367-538 (876)
1783 316 2DB0_A 253aa long hypothetical 88.9 0.021 2.4E-06 50.5 0.0 141 548-715 108-248 (253)
1784 317 2DB0_B 253aa long hypothetical 88.9 0.021 2.4E-06 50.5 0.0 141 548-715 108-248 (253)
1785 318 4K92_B CLIP-associating protei 88.8 0.022 2.5E-06 52.5 0.0 148 548-714 90-237 (273)
1786 319 6MQ7_B CLIP-associating protei 88.8 0.022 2.5E-06 52.5 0.0 148 548-714 90-237 (273)
1787 320 1GCJ_B IMPORTIN-BETA; HEAT REP 88.7 0.022 2.5E-06 55.4 0.0 154 548-714 135-295 (460)
1788 321 1F59_B IMPORTIN BETA-1/FXFG NU 88.7 0.022 2.6E-06 54.8 0.0 154 548-714 129-289 (442)
1789 322 1UKL_A Importin beta-1 subunit 88.6 0.022 2.6E-06 60.2 0.0 113 246-360 367-480 (876)
1790 323 1U6G_C Cullin homolog 1, RING- 88.2 0.025 2.9E-06 62.9 0.0 146 548-714 891-1036(1230)
1791 324 4MFU_A Beta-catenin-like prote 88.1 0.031 3.1E-06 59.1 0.0 135 246-381 69-222 (490)
1792 325 6CRI_I Bone marrow stromal ant 87.6 0.03 3.5E-06 55.5 0.0 141 548-714 37-177 (570)
1793 326 3QML_D 78 kDa glucose-regulate 87.5 0.038 3.6E-06 55.4 0.0 165 534-712 56-246 (315)
1794 327 5IFE_C Splicing factor 3B subu 87.4 0.036 3.7E-06 65.2 0.0 154 547-714 848-1003(1304)
1795 328 6AHD_1 Pre-mRNA-processing-spl 87.4 0.036 3.7E-06 65.2 0.0 154 547-714 848-1003(1304)
1796 329 5MU7_A Coatomer subunit beta, 87.4 0.031 3.7E-06 52.4 0.0 141 549-716 190-331 (373)
1797 330 5VE8_B Kap123, Histone H3; Bid 87.4 0.031 3.7E-06 61.1 0.0 154 549-714 868-1034(1116)
1798 331 2IX8_A ELONGATION FACTOR 3A; N 87.3 0.034 3.8E-06 61.3 0.0 150 547-713 48-198 (976)
1799 332 3WOY_A CLIP-associating protei 87.3 0.034 3.8E-06 50.1 0.0 147 548-714 78-225 (251)
1800 333 5DN7_A Protein FAM179B; TOG do 87.2 0.035 3.9E-06 52.0 0.0 146 548-714 67-212 (293)
1801 334 4HM9_A Beta-catenin-like prote 87.2 0.04 3.9E-06 59.6 0.0 135 246-381 147-300 (568)
1802 335 6S47_Bi 60S ribosomal protein 87.2 0.035 3.9E-06 61.2 0.0 155 546-713 42-198 (972)
1803 336 6QH5_B AP-2 complex subunit al 87.1 0.034 4E-06 55.8 0.0 142 548-715 50-191 (592)
1804 337 5A1V_G ADP-RIBOSYLATION FACTOR 87.1 0.037 4E-06 61.9 0.0 105 547-670 259-364 (968)
1805 338 3TJZ_B ADP-ribosylation factor 87.0 0.036 4.1E-06 52.5 0.0 16 697-712 225-240 (355)
1806 339 2IW3_B ELONGATION FACTOR 3A; A 86.9 0.037 4.1E-06 61.1 0.0 151 547-714 54-205 (986)
1807 340 5NZR_B Coatomer subunit alpha, 86.8 0.04 4.3E-06 61.6 0.0 105 547-670 259-364 (968)
1808 341 4P6Z_B BST2/tetherin, HIV-1 Vp 86.8 0.037 4.3E-06 55.9 0.0 142 548-715 66-207 (600)
1809 342 5VCH_A Kap123; Bidding yeast k 86.7 0.038 4.4E-06 60.5 0.0 153 550-714 869-1034(1116)
1810 343 6BCU_A mTOR, Target of rapamyc 86.7 0.04 4.4E-06 67.9 0.0 131 549-694 952-1084(2549)
1811 344 6BCX_B mTOR, Target of rapamyc 86.7 0.04 4.4E-06 67.9 0.0 131 549-694 952-1084(2549)
1812 345 5IFE_C Splicing factor 3B subu 86.4 0.045 4.7E-06 64.2 0.0 110 249-359 935-1044(1304)
1813 346 6AHD_1 Pre-mRNA-processing-spl 86.4 0.045 4.7E-06 64.2 0.0 110 249-359 935-1044(1304)
1814 347 6LTJ_L Histone H3.2, Histone H 86.4 0.056 4.7E-06 63.5 0.0 152 563-723 1065-1263(1295)
1815 348 6CRI_R Bone marrow stromal ant 86.2 0.043 4.9E-06 55.5 0.0 139 548-714 63-201 (585)
1816 349 5DFZ_B Vacuolar protein sortin 85.9 0.051 5.3E-06 64.4 0.0 292 245-645 464-781 (1460)
1817 350 2QNA_A Importin subunit beta-1 85.8 0.046 5.4E-06 56.3 0.0 154 548-714 4-164 (762)
1818 351 3WOZ_C CLIP-associating protei 85.7 0.049 5.4E-06 48.6 0.0 154 547-716 5-159 (232)
1819 352 3WOZ_D CLIP-associating protei 85.7 0.049 5.4E-06 48.6 0.0 154 547-716 5-159 (232)
1820 353 5DCQ_C artificial repeat prote 85.5 0.051 5.7E-06 45.4 0.0 47 654-712 120-166 (170)
1821 354 4L7M_A Putative uncharacterize 85.3 0.051 6E-06 48.1 0.0 143 548-713 120-265 (269)
1822 355 4P6Z_B BST2/tetherin, HIV-1 Vp 85.1 0.053 6.2E-06 54.6 0.0 109 245-359 176-284 (600)
1823 356 5MU7_A Coatomer subunit beta, 85.1 0.053 6.2E-06 50.7 0.0 101 598-714 191-292 (373)
1824 357 4UQI_B AP-2 COMPLEX SUBUNIT AL 85.0 0.056 6.3E-06 55.9 0.0 142 548-715 50-191 (657)
1825 358 6MZE_Z Tubulin alpha-1A chain, 84.9 0.055 6.4E-06 53.4 0.0 149 548-715 340-496 (536)
1826 359 4MFU_A Beta-catenin-like prote 84.8 0.067 6.5E-06 56.4 0.0 117 610-733 42-175 (490)
1827 360 5N3U_B Phycocyanobilin lyase s 84.6 0.06 6.9E-06 46.1 0.0 135 547-714 32-167 (208)
1828 361 6QH5_B AP-2 complex subunit al 84.4 0.06 7E-06 53.8 0.0 145 548-713 122-268 (592)
1829 362 2DB0_A 253aa long hypothetical 84.4 0.062 7.1E-06 47.2 0.0 104 547-670 32-136 (253)
1830 363 2DB0_B 253aa long hypothetical 84.4 0.062 7.1E-06 47.2 0.0 104 547-670 32-136 (253)
1831 364 2JKT_A AP-2 COMPLEX SUBUNIT AL 84.2 0.064 7.3E-06 54.8 0.0 140 548-713 75-216 (623)
1832 365 3LTJ_A AlphaRep-4; protein eng 84.1 0.065 7.5E-06 45.7 0.0 28 685-713 140-167 (201)
1833 366 4P6Z_B BST2/tetherin, HIV-1 Vp 84.1 0.065 7.5E-06 54.0 0.0 145 548-713 138-284 (600)
1834 367 6QH7_A AP-2 complex subunit al 84.0 0.067 7.6E-06 54.8 0.0 140 548-713 75-216 (621)
1835 368 6CRI_R Bone marrow stromal ant 83.9 0.067 7.7E-06 53.9 0.0 67 548-625 135-201 (585)
1836 369 4UQI_B AP-2 COMPLEX SUBUNIT AL 83.9 0.069 7.8E-06 55.2 0.0 145 548-713 122-268 (657)
1837 370 5XAH_A Importin-4; Histone, Ch 83.5 0.071 8.2E-06 50.5 0.0 142 561-715 163-307 (416)
1838 371 5XAH_C Importin-4; Histone, Ch 83.5 0.071 8.2E-06 50.5 0.0 142 561-715 163-307 (416)
1839 372 5FRS_A SISTER CHROMATID COHESI 83.5 0.08 8.3E-06 57.5 0.0 149 548-715 282-431 (703)
1840 373 4HM9_A Beta-catenin-like prote 83.5 0.087 8.3E-06 56.8 0.0 136 246-381 198-350 (568)
1841 374 5FRP_A SISTER CHROMATID COHESI 83.4 0.082 8.4E-06 57.5 0.0 149 548-715 282-431 (703)
1842 375 5GM6_G Prp8, Brr2, Snu114, Rse 83.4 0.077 8.4E-06 58.7 0.0 69 248-316 603-671 (971)
1843 376 5ZWM_1 Pre-mRNA-splicing facto 83.4 0.077 8.4E-06 58.7 0.0 69 248-316 603-671 (971)
1844 377 3TJZ_B ADP-ribosylation factor 83.4 0.075 8.5E-06 50.1 0.0 102 596-712 251-352 (355)
1845 378 6CRI_R Bone marrow stromal ant 83.3 0.075 8.6E-06 53.5 0.0 101 246-359 100-200 (585)
1846 379 6U62_A Regulatory-associated p 83.0 0.095 9E-06 62.5 0.0 159 544-715 468-630 (1392)
1847 380 6BCX_W mTOR, Target of rapamyc 82.8 0.098 9.3E-06 62.1 0.0 159 544-715 476-638 (1343)
1848 381 4QMH_A LP04448p; PROTEIN BINDI 82.8 0.081 9.4E-06 46.0 0.0 114 595-716 17-130 (241)
1849 382 6QH5_A AP-2 complex subunit al 82.8 0.083 9.4E-06 54.0 0.0 140 548-713 75-216 (621)
1850 383 6EMK_C Serine/threonine-protei 82.8 0.086 9.4E-06 64.9 0.0 71 548-625 922-993 (2474)
1851 384 5MU7_A Coatomer subunit beta, 82.7 0.082 9.5E-06 49.3 0.0 71 548-624 39-110 (373)
1852 385 6CRI_I Bone marrow stromal ant 82.7 0.081 9.6E-06 52.1 0.0 145 548-713 109-255 (570)
1853 386 4QMI_B Cytoskeleton-associated 82.6 0.084 9.7E-06 46.0 0.0 112 595-715 19-131 (240)
1854 387 4QMJ_A Cytoskeleton-associated 82.6 0.084 9.7E-06 46.0 0.0 112 595-715 19-131 (240)
1855 388 6MZG_E Tubulin alpha-1A chain, 82.5 0.084 9.8E-06 52.4 0.0 147 549-715 315-466 (554)
1856 389 1B3U_A PROTEIN PHOSPHATASE PP2 82.3 0.085 1E-05 51.8 0.0 147 547-713 164-310 (588)
1857 390 2OF3_A ZYG-9; Multifunctional 82.0 0.098 1.1E-05 48.1 0.0 150 548-714 88-237 (266)
1858 391 4I5L_D PP2A A alpha subunit (9 81.8 0.092 1.1E-05 51.5 0.0 147 547-713 160-306 (584)
1859 392 4Y5J_A Mini spindles TOG3; XMA 81.7 0.097 1.1E-05 46.2 0.0 71 548-625 15-89 (248)
1860 393 4P6Z_G BST2/tetherin, HIV-1 Vp 81.6 0.1 1.1E-05 53.7 0.0 137 549-713 81-217 (627)
1861 394 5KC2_B Phosphatidylinositol 3- 81.5 0.11 1.2E-05 61.5 0.0 126 247-379 621-746 (1454)
1862 395 6MZG_E Tubulin alpha-1A chain, 81.1 0.1 1.2E-05 51.7 0.0 151 550-714 57-211 (554)
1863 396 6MZE_Z Tubulin alpha-1A chain, 81.1 0.1 1.2E-05 51.2 0.0 108 600-714 300-412 (536)
1864 397 6RXU_UJ Periodic tryptophan pr 80.9 0.12 1.2E-05 62.5 0.0 152 548-713 1625-1791(1802)
1865 398 5FVM_B SERINE/THREONINE-PROTEI 80.8 0.12 1.3E-05 63.5 0.0 147 548-714 1008-1155(2471)
1866 399 6GWC_C Tubulin alpha chain, Tu 80.7 0.11 1.3E-05 45.3 0.0 49 654-714 120-168 (232)
1867 400 1OYZ_A X-RAY STRUCTURE OF YB61 80.6 0.11 1.3E-05 46.1 0.0 64 549-623 92-156 (280)
1868 401 6GX7_F Tubulin alpha chain, Tu 80.5 0.12 1.3E-05 44.1 0.0 122 548-713 46-167 (201)
1869 402 2NYL_A Protein phosphatase 2, 80.4 0.11 1.3E-05 50.7 0.0 147 547-713 158-304 (582)
1870 403 5VJC_B Protein mini spindles; 80.3 0.12 1.4E-05 47.2 0.0 72 547-625 50-121 (271)
1871 404 6RXV_UJ Periodic tryptophan pr 80.3 0.13 1.4E-05 62.1 0.0 152 548-713 1625-1791(1802)
1872 405 4I5L_D PP2A A alpha subunit (9 80.2 0.11 1.4E-05 50.8 0.0 109 547-670 238-349 (584)
1873 406 1IBR_B RAN IMPORTIN BETA SUBU 80.2 0.12 1.4E-05 49.6 0.0 156 549-716 261-440 (462)
1874 407 1B3U_A PROTEIN PHOSPHATASE PP2 80.1 0.12 1.4E-05 50.8 0.0 109 547-670 242-353 (588)
1875 408 4P6Z_G BST2/tetherin, HIV-1 Vp 80.0 0.13 1.4E-05 52.9 0.0 67 548-625 152-218 (627)
1876 409 5NR4_A CLIP-associating protei 80.0 0.12 1.4E-05 44.1 0.0 109 244-360 51-159 (230)
1877 410 2P8Q_A Importin beta-1 subunit 79.9 0.12 1.4E-05 54.0 0.0 154 548-714 129-289 (876)
1878 411 4I5L_D PP2A A alpha subunit (9 79.9 0.12 1.4E-05 50.6 0.0 147 547-713 320-466 (584)
1879 412 1QGR_A IMPORTIN BETA SUBUNIT, 79.8 0.12 1.4E-05 54.2 0.0 154 548-714 129-289 (876)
1880 413 1B3U_A PROTEIN PHOSPHATASE PP2 79.8 0.12 1.5E-05 50.6 0.0 146 547-712 324-469 (588)
1881 414 6MZE_Z Tubulin alpha-1A chain, 79.7 0.13 1.5E-05 50.5 0.0 152 550-715 57-212 (536)
1882 415 5F0N_A cohesin subunit Pds5, K 79.1 0.17 1.6E-05 59.2 0.0 150 547-714 271-420 (1175)
1883 416 4NEE_G AP-2 complex subunit si 78.8 0.15 1.7E-05 48.9 0.0 115 548-671 149-273 (398)
1884 417 3W3U_A Importin subunit beta-3 78.8 0.14 1.7E-05 55.2 0.0 158 548-714 849-1007(1078)
1885 418 4NEE_B AP-2 complex subunit si 78.7 0.15 1.7E-05 49.0 0.0 115 548-671 149-273 (398)
1886 419 3DAD_A FH1/FH2 domain-containi 78.5 0.18 1.7E-05 50.5 0.0 154 565-729 135-309 (339)
1887 420 5VJC_A Protein mini spindles; 78.4 0.16 1.7E-05 46.5 0.0 73 546-625 49-121 (271)
1888 421 5WBJ_A Regulatory-associated p 78.3 0.18 1.8E-05 59.3 0.0 156 548-716 467-631 (1287)
1889 422 5WBK_A Regulatory-associated p 78.3 0.18 1.8E-05 59.3 0.0 156 548-716 467-631 (1287)
1890 423 6EN4_C Splicing factor 3B subu 78.2 0.15 1.8E-05 53.3 0.0 154 548-715 192-347 (852)
1891 424 5F0O_A cohesin subunit Pds5, K 78.2 0.18 1.8E-05 58.5 0.0 150 547-714 280-429 (1133)
1892 425 2NYL_A Protein phosphatase 2, 77.8 0.16 1.9E-05 49.5 0.0 109 547-670 236-347 (582)
1893 426 3W3W_A Importin subunit beta-3 77.6 0.16 1.9E-05 54.7 0.0 157 548-714 849-1007(1078)
1894 427 4LAC_A Serine/threonine-protei 77.5 0.17 1.9E-05 44.2 0.0 115 239-360 27-141 (258)
1895 428 6FT5_A A3_A3; alphaRep, artifi 77.5 0.17 1.9E-05 47.7 0.0 60 547-623 54-113 (409)
1896 429 1F59_B IMPORTIN BETA-1/FXFG NU 77.4 0.17 2E-05 48.1 0.0 158 547-714 35-204 (442)
1897 430 2NYL_A Protein phosphatase 2, 77.3 0.16 2E-05 49.4 0.0 70 547-625 318-387 (582)
1898 431 5FVM_B SERINE/THREONINE-PROTEI 77.2 0.18 2E-05 61.6 0.0 71 548-625 925-996 (2471)
1899 432 3LTJ_A AlphaRep-4; protein eng 77.2 0.18 2E-05 42.7 0.0 121 548-712 77-197 (201)
1900 433 5JO8_A CEP104; centriolar prot 77.2 0.18 2E-05 46.5 0.0 155 548-714 87-245 (279)
1901 434 4P6Z_G BST2/tetherin, HIV-1 Vp 77.2 0.18 2E-05 51.7 0.0 101 246-359 117-217 (627)
1902 435 1GCJ_B IMPORTIN-BETA; HEAT REP 77.2 0.17 2E-05 48.4 0.0 154 549-714 267-444 (460)
1903 436 6GWC_C Tubulin alpha chain, Tu 76.9 0.18 2.1E-05 43.9 0.0 121 548-712 108-228 (232)
1904 437 3QML_D 78 kDa glucose-regulate 76.8 0.22 2.1E-05 49.4 0.0 104 609-717 42-154 (315)
1905 438 4G3A_B CLIP-associating protei 76.8 0.18 2.1E-05 43.5 0.0 113 244-358 6-118 (237)
1906 439 6IDX_A Engulfment and cell mot 76.8 0.22 2.1E-05 52.8 0.0 157 563-731 102-272 (524)
1907 440 6IE1_A Engulfment and cell mot 76.8 0.22 2.1E-05 52.8 0.0 157 563-731 102-272 (524)
1908 441 5H2V_A Importin subunit beta-3 76.6 0.18 2.1E-05 54.2 0.0 157 548-714 849-1007(1078)
1909 442 1TE4_A conserved protein MTH18 76.5 0.19 2.2E-05 39.5 0.0 118 548-710 13-130 (131)
1910 443 6S47_Bi 60S ribosomal protein 76.5 0.2 2.2E-05 54.8 0.0 155 548-714 127-321 (972)
1911 444 1OYZ_A X-RAY STRUCTURE OF YB61 76.4 0.19 2.2E-05 44.5 0.0 96 596-712 91-187 (280)
1912 445 5NR4_A CLIP-associating protei 76.2 0.19 2.2E-05 42.7 0.0 111 595-713 6-122 (230)
1913 446 5A1V_E ADP-RIBOSYLATION FACTOR 75.9 0.22 2.3E-05 54.5 0.0 137 548-713 69-205 (874)
1914 447 5NZR_G Coatomer subunit alpha, 75.9 0.22 2.3E-05 54.5 0.0 137 548-713 69-205 (874)
1915 448 6HWP_A A3_bGFPD; alphaRep, art 75.5 0.21 2.4E-05 46.8 0.0 49 654-714 129-177 (409)
1916 449 3W3U_A Importin subunit beta-3 75.5 0.21 2.4E-05 53.8 0.0 152 549-714 358-512 (1078)
1917 450 4QMI_B Cytoskeleton-associated 75.5 0.21 2.4E-05 43.2 0.0 107 245-360 59-167 (240)
1918 451 4QMJ_A Cytoskeleton-associated 75.5 0.21 2.4E-05 43.2 0.0 107 245-360 59-167 (240)
1919 452 2IX8_A ELONGATION FACTOR 3A; N 75.4 0.22 2.4E-05 54.3 0.0 153 548-713 128-318 (976)
1920 453 5XAH_A Importin-4; Histone, Ch 75.4 0.21 2.4E-05 46.9 0.0 162 548-713 33-222 (416)
1921 454 5XAH_C Importin-4; Histone, Ch 75.4 0.21 2.4E-05 46.9 0.0 162 548-713 33-222 (416)
1922 455 5H2V_A Importin subunit beta-3 75.1 0.22 2.5E-05 53.6 0.0 154 548-714 357-512 (1078)
1923 456 6OWT_A AP-2 complex subunit al 75.0 0.24 2.6E-05 54.6 0.0 140 548-713 75-216 (939)
1924 457 4G3A_B CLIP-associating protei 74.9 0.22 2.6E-05 42.9 0.0 107 548-671 91-198 (237)
1925 458 4XL5_C Green fluorescent prote 74.6 0.23 2.7E-05 43.8 0.0 121 548-712 139-259 (263)
1926 459 4FDD_A Transportin-1, RNA-bind 74.5 0.23 2.7E-05 51.3 0.0 155 548-714 129-286 (852)
1927 460 4D4Z_A DEOXYHYPUSINE HYDROXYLA 74.4 0.23 2.7E-05 44.2 0.0 124 546-711 9-134 (294)
1928 461 4D50_A DEOXYHYPUSINE HYDROXYLA 74.4 0.23 2.7E-05 44.2 0.0 124 546-711 9-134 (294)
1929 462 6QH5_A AP-2 complex subunit al 74.2 0.24 2.8E-05 50.3 0.0 69 548-625 147-217 (621)
1930 463 5LPH_B Centrosomal protein of 74.0 0.26 2.8E-05 45.9 0.0 155 549-714 94-251 (288)
1931 464 1QBK_B STRUCTURE OF THE KARYOP 73.9 0.24 2.8E-05 51.6 0.0 156 548-715 129-287 (890)
1932 465 3W3W_A Importin subunit beta-3 73.9 0.24 2.9E-05 53.2 0.0 153 548-714 357-512 (1078)
1933 466 1IBR_B RAN IMPORTIN BETA SUBU 73.6 0.25 2.9E-05 47.1 0.0 158 547-714 35-204 (462)
1934 467 5VCH_A Kap123; Bidding yeast k 73.4 0.26 3E-05 53.4 0.0 153 548-714 361-516 (1116)
1935 468 6QH7_A AP-2 complex subunit al 73.4 0.26 3E-05 50.0 0.0 69 548-625 147-217 (621)
1936 469 2JKT_A AP-2 COMPLEX SUBUNIT AL 73.3 0.27 3E-05 49.9 0.0 69 548-625 147-217 (623)
1937 470 1GCJ_B IMPORTIN-BETA; HEAT REP 73.0 0.27 3.1E-05 47.0 0.0 158 547-714 41-210 (460)
1938 471 1OYZ_A X-RAY STRUCTURE OF YB61 73.0 0.27 3.1E-05 43.4 0.0 121 547-710 159-279 (280)
1939 472 2JKT_A AP-2 COMPLEX SUBUNIT AL 72.8 0.28 3.2E-05 49.7 0.0 67 548-623 330-397 (623)
1940 473 5VE8_B Kap123, Histone H3; Bid 72.7 0.27 3.2E-05 53.1 0.0 153 548-714 361-516 (1116)
1941 474 4ZV6_A AlphaRep-7, Octarellin 71.7 0.3 3.5E-05 43.7 0.0 29 685-714 140-168 (294)
1942 475 6BZX_A alpha-Rep, Octarellin V 71.4 0.31 3.6E-05 43.6 0.0 29 685-714 140-168 (294)
1943 476 5IFE_C Splicing factor 3B subu 70.4 0.38 3.9E-05 55.8 0.0 154 548-715 644-799 (1304)
1944 477 6AHD_1 Pre-mRNA-processing-spl 70.4 0.38 3.9E-05 55.8 0.0 154 548-715 644-799 (1304)
1945 478 2QK2_A LP04448p; Mini spindles 70.3 0.34 4E-05 41.6 0.0 113 243-358 13-126 (242)
1946 479 6MZG_E Tubulin alpha-1A chain, 70.0 0.35 4.1E-05 47.5 0.0 71 549-625 138-211 (554)
1947 480 6QH7_A AP-2 complex subunit al 69.9 0.36 4.1E-05 48.9 0.0 100 247-359 76-177 (621)
1948 481 1UKL_A Importin beta-1 subunit 69.9 0.35 4.1E-05 50.3 0.0 154 548-714 129-289 (876)
1949 482 6EMK_C Serine/threonine-protei 69.9 0.38 4.1E-05 58.8 0.0 136 562-714 1016-1152(2474)
1950 483 4XL5_C Green fluorescent prote 69.9 0.36 4.1E-05 42.4 0.0 49 654-714 120-168 (263)
1951 484 4D4Z_A DEOXYHYPUSINE HYDROXYLA 69.8 0.36 4.1E-05 42.9 0.0 127 547-715 161-289 (294)
1952 485 4D50_A DEOXYHYPUSINE HYDROXYLA 69.8 0.36 4.1E-05 42.9 0.0 127 547-715 161-289 (294)
1953 486 6QH5_A AP-2 complex subunit al 69.7 0.37 4.2E-05 48.8 0.0 67 548-623 330-397 (621)
1954 487 4XL5_C Green fluorescent prote 69.5 0.37 4.2E-05 42.3 0.0 88 600-714 143-230 (263)
1955 488 6LTJ_L Histone H3.2, Histone H 69.2 0.52 4.4E-05 55.1 0.0 106 609-716 1064-1189(1295)
1956 489 5WLC_LM rpS18_uS13, rpS4_eS4, 69.1 0.44 4.4E-05 57.4 0.0 153 548-713 1597-1758(1769)
1957 490 5YVI_A Transportin-1, RNA-bind 69.1 0.37 4.4E-05 49.7 0.0 155 548-714 131-288 (868)
1958 491 3VWA_A Cytoplasmic export prot 68.9 0.42 4.5E-05 49.3 0.0 111 594-715 340-450 (560)
1959 492 3VWA_B Cytoplasmic export prot 68.9 0.42 4.5E-05 49.2 0.0 111 594-715 340-450 (560)
1960 493 3C5W_A PP2A A subunit, PP2A C; 68.8 0.38 4.5E-05 40.3 0.0 109 245-360 7-115 (232)
1961 494 4K92_B CLIP-associating protei 68.6 0.41 4.6E-05 43.1 0.0 109 244-360 129-237 (273)
1962 495 6MQ7_B CLIP-associating protei 68.6 0.41 4.6E-05 43.1 0.0 109 244-360 129-237 (273)
1963 496 4LAC_A Serine/threonine-protei 68.3 0.41 4.7E-05 41.4 0.0 109 245-360 111-219 (258)
1964 497 6MQ5_A CLIP-associating protei 68.0 0.43 4.8E-05 42.3 0.0 108 245-360 49-157 (257)
1965 498 2QK1_A Protein STU2; stu2, Stu 67.9 0.42 4.9E-05 40.9 0.0 116 244-360 103-221 (249)
1966 499 4D4Z_A DEOXYHYPUSINE HYDROXYLA 67.6 0.43 5E-05 42.3 0.0 60 547-623 74-135 (294)
1967 500 4D50_A DEOXYHYPUSINE HYDROXYLA 67.6 0.43 5E-05 42.3 0.0 60 547-623 74-135 (294)
1968
1969 No 1
1970 >1XM9_A plakophilin 1 Plakophilin-1; armadillo repeat, CELL ADHESION; 2.8A {Homo sapiens} SCOP: a.118.1.24
1971 Probab=99.69 E-value=6.3e-22 Score=206.93 Aligned_cols=453 Identities=100% Similarity=1.422 Sum_probs=304.9 Template_Neff=12.600
1972
1973 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
1974 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
1975 .++.+..++.+.++.++..++.+|..++...+.....+...++++.+..++.+.+..++..++.++.+++.........+
1976 T Consensus 3 ~l~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 82 (457)
1977 T 1XM9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
1978 T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
1979 T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHhcCCCHHHHHHHHHHHHHHhhCCHHHHHHH
1980 Confidence 45566777777778889999999999885444444445555778888888888788899999999999886544333444
1981
1982
1983 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFN 405 (747)
1984 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (747)
1985 ...+.++.++.++....+..++..++.+|.+++........+..++++.|+.++..+.++|+.+.+.+.....++++...
1986 T Consensus 83 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (457)
1987 T 1XM9_A 83 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFN 162 (457)
1988 T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHHHHHHHCCCCCCHHHHTCC---------CCCHHHHHH
1989 T ss_pred HhcChHHHHHHHhhhCCCHHHHHHHHHHHHHHhCCHHHHHHHHcchHHHHHHHhccccCCCCCCCCCcccccCCHHHHHH
1990 Confidence 44567777777775344677888899999999875444333335788999999999999999988887777777777766
1991
1992
1993 Q NP_000290.2 406 ATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYR 485 (747)
1994 Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (747)
1995 +..+|.. +...+..++.+....|+++.|+.+++.+......+..-.+.+..+|.|++..
1996 T Consensus 163 a~~~L~~---------------------l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~l~~~ 221 (457)
1997 T 1XM9_A 163 ATGCLRN---------------------LSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYR 221 (457)
1998 T ss_dssp HHHHHHH---------------------HTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTT
1999 T ss_pred HHHHHHH---------------------HccChHHHHHHHhcccHHHHHHHHHHHhhhcCcCCHHHHHHHHHHHHHHhcc
2000 Confidence 6665543 2222223444555567788888887765555556777888999999999999
2001
2002
2003 Q NP_000290.2 486 LDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATL 565 (747)
2004 Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr 565 (747)
2005 .+.+.+..+..+++.++..+..+...+|+.+...+++....+|.++....+......+.+.++++.++.++....+..++
2006 T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 301 (457)
2007 T 1XM9_A 222 LDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATL 301 (457)
2008 T ss_dssp HHHHSCCHHHHHHHTC----------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHH
2009 T ss_pred cccCCCcchhhhhhcccccccccccccccCcccchhccccccCCCCcccCCCchhHHhhchhHHHHHHHHhccCCCHHHH
2010 Confidence 99999999999999999999999999999999999999999999998888888888888999999999999733556777
2011
2012
2013 Q NP_000290.2 566 EACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLT 645 (747)
2014 Q Consensus 566 ~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~ 645 (747)
2015 ..++.+|.+++..............+...++++.|+.++.+.++.++..++.+|.+++..+.....+..++++.++.++.
2016 T Consensus 302 ~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~l~~~l~ 381 (457)
2017 T 1XM9_A 302 EACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLT 381 (457)
2018 T ss_dssp HHHHHHHHHHTTCSSSHHHHHHHCCCCCSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSGGGHHHHHHHTHHHHHHTTT
2019 T ss_pred HHHHHHHHHHHhccccccCCcchhhhhhcchHHHHHHHHhcCCHHHHHHHHHHHHHHhcCHHHHHHHHcccHHHHHHHHh
2020 Confidence 78999999998753200000002233456788999999988888999999999999996644432233347777777776
2021
2022
2023 Q NP_000290.2 646 SHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKELQG 719 (747)
2024 Q Consensus 646 s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~~~~ 719 (747)
2025 ........++.++..++.+|.+|+...+.....+.+.++++.|..++....++.++..++.+|.+++.+.+.+.
2026 T Consensus 382 ~~~~~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~v~~~a~~~L~~l~~~~~~~~ 455 (457)
2027 T 1XM9_A 382 SHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKELQG 455 (457)
2028 T ss_dssp SCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSSSTTCSS
2029 T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHhccHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhcHhHhc
2030 Confidence 52000000567888999999999865566666777778889999988862278899999999999998877654
2031
2032
2033 No 2
2034 >3L6X_A Catenin delta-1, E-cadherin; p120, catenin, cadherin, E-cadherin, armadillo; HET: SO4; 2.4A {Homo sapiens}
2035 Probab=99.41 E-value=1.1e-17 Score=185.51 Aligned_cols=438 Identities=32% Similarity=0.540 Sum_probs=299.3 Template_Neff=11.000
2036
2037 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKL 323 (747)
2038 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~ 323 (747)
2039 ..++.++.++...++.++..++.+|.+++.........+...++++.|+.++.+.+..++..++.+|.+++.. ......
2040 T Consensus 48 ~~l~~li~~L~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 127 (584)
2041 T 3L6X_A 48 PELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKI 127 (584)
2042 T ss_dssp CCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHH
2043 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCCcHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCCHHHHH
2044 Confidence 4566677777777788899999999998854444444455567888888888887788999999999999864 333444
2045
2046
2047 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMS--REVVDPE 401 (747)
2048 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~~~~~~~--~~~~~~~ 401 (747)
2049 .+...+.++.++.++....+..++..++.+|.+++........++..++..|+.++..+.++|........ ....+++
2050 T Consensus 128 ~~~~~~~i~~L~~ll~~~~~~~v~~~a~~~L~~L~~~~~~~~~l~~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (584)
2051 T 3L6X_A 128 AIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWES 207 (584)
2052 T ss_dssp HHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHHHTHHHCCCCCCHHHHCCC----------CCCCHH
2053 T ss_pred HHHcCChHHHHHHHHHHcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccccCCCCCCCCCcCCCCcccChHH
2054 Confidence 44555778888888863346678889999999998765544444445778888888888877754332211 1223455
2055
2056
2057 Q NP_000290.2 402 VFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSAD-AGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
2058 Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
2059 +..++.++|+. ++..+ ..++.++...|+++.|+..++.++....-+.+.+++|.++|.
2060 T Consensus 208 v~~~a~~~L~~---------------------l~~~~~~~~~~l~~~~g~v~~L~~~l~~~~~~~~~~~~~~~~a~~~L~ 266 (584)
2061 T 3L6X_A 208 VLTNTAGCLRN---------------------VSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLR 266 (584)
2062 T ss_dssp HHHHHHHHHHH---------------------HTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHH
2063 T ss_pred HHHHHHHHHHH---------------------HhcCCHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
2064 Confidence 66666665543 22222 245556666789999999888765544557788999999999
2065
2066
2067 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
2068 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
2069 ||++..+.++|...+..+.... ..+ +-...+......+.+.++++.|+.++....
2070 T Consensus 267 ~L~~~~~~~~~~~~~~~~~~~~-----------~~~--------------~~~~~~~~~~~~l~~~~~~~~l~~ll~~~~ 321 (584)
2071 T 3L6X_A 267 NLSYQVHREIPQAERYQEAAPN-----------VAN--------------NTGTSPARGYELLFQPEVVRIYISLLKESK 321 (584)
2072 T ss_dssp HHHTTHHHHSTTCCC---------------------------------------CCCCGGGGGGSHHHHHHHHHHHHHCC
2073 T ss_pred HHHhhhhccChhHHHHHHhcCc-----------CCC--------------CCCCCChhhhhHhhChhHHHHHHHHHHcCC
2074 Confidence 9999998888765554432110 000 111222233344567889999999998423
2075
2076
2077 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEV 640 (747)
2078 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~L 640 (747)
2079 ++.++..++.+|.+++......... ....+.+.++++.|+.++.+.++.++..++++|.+|+........+..++++.|
2080 T Consensus 322 ~~~~~~~a~~~L~~L~~~~~~~~~~-~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~l~~~~l~~L 400 (584)
2081 T 3L6X_A 322 TPAILEASAGAIQNLCAGRWTYGRY-IRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNL 400 (584)
2082 T ss_dssp CHHHHHHHHHHHHHHHSSCSHHHHH-HHHHHTSHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHH
2083 T ss_pred CHHHHHHHHHHHHHHhCCCccCCHH-HHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHhcChHHHHHHHcchHHHH
2084 Confidence 7788899999999998742100000 233445678899999999988889999999999999877444333334677888
2085
2086
2087 Q NP_000290.2 641 TRLLTSHTGNT--SNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS-ASPKAAEAARLLLSDMWSSKEL 717 (747)
2088 Q Consensus 641 l~LL~s~s~~~--~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~-~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
2089 +.++....... ..+..++..++.+|.+++...+.....+.+.++++.|+.++... .+..++..|+.+|.+++...+.
2090 T Consensus 401 ~~~L~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~~~v~~~a~~~L~~l~~~~~~ 480 (584)
2091 T 3L6X_A 401 VKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKEL 480 (584)
2092 T ss_dssp HHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHHHTSHHH
2093 T ss_pred HHcCCCCCCCCCcCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCHHH
2094 Confidence 88776521000 00344577889999998876666777777888899999988653 1478899999999999999999
2095
2096
2097 Q NP_000290.2 718 QGVLRQQGFDRN 729 (747)
2098 Q Consensus 718 ~~~~~~~~~~~~ 729 (747)
2099 ...+.+.|+-..
2100 T Consensus 481 ~~~l~~~g~~~~ 492 (584)
2101 T 3L6X_A 481 RKPLEKEGWKKS 492 (584)
2102 T ss_dssp HHHHHTTTCCGG
2103 T ss_pred HHHHHHcCCchh
2104 Confidence 999998888766
2105
2106
2107 No 3
2108 >5D5K_C Importin subunit alpha-1, Poly [ADP-ribose]; PARP-2 NLS, PARP-2, poly(ADP-ribose)polymerase-2, Importin; 1.9A {Mus musculus}
2109 Probab=98.56 E-value=1.1e-11 Score=126.19 Aligned_cols=369 Identities=14% Similarity=0.172 Sum_probs=230.1 Template_Neff=13.100
2110
2111 Q NP_000290.2 243 SGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESA-KQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTT 320 (747)
2112 Q Consensus 243 ~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~-~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~ 320 (747)
2113 ....++.+...+.+.++.++..++.++..+....... ...+...++++.++..+. ..++.++..++.++..++.....
2114 T Consensus 11 ~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~ 90 (466)
2115 T 5D5K_C 11 VNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSE 90 (466)
2116 T ss_dssp CSCCHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHH
2117 T ss_pred cCcCHHHHHHHHccCCHHHHHHHHHHHHHHHhcCCCCCHHHHHHcCcHHHHHHHhhCCCChHHHHHHHHHHHHHcCCChH
2118 Confidence 4456667777777778888999999998887643221 122333456777777776 34567888899999888764443
2119
2120
2121 Q NP_000290.2 321 NKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVV 398 (747)
2122 Q Consensus 321 ~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~ 398 (747)
2123 ....+...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.+..++..+. .+..
2124 T Consensus 91 ~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----------~~~~ 158 (466)
2125 T 5D5K_C 91 QTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPD-----------LSTL 158 (466)
2126 T ss_dssp HHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSC-----------GGGS
2127 T ss_pred HHHHHhccchHHHHHHHhc-CCCCcHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhhCCC-----------cccc
2128 Confidence 3333444457777888876 56778888999999998875432 222333 67777777776421 1112
2129
2130
2131 Q NP_000290.2 399 DPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCV 478 (747)
2132 Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (747)
2133 ++++...+..++..-. .............+++..+...++. -+..-...+...
2134 T Consensus 159 ~~~~~~~a~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~ 211 (466)
2135 T 5D5K_C 159 ACGYLRNLTWTLSNLC---------------------RNKNPAPPLDAVEQILPTLVRLLHH------NDPEVLADSCWA 211 (466)
2136 T ss_dssp CHHHHHHHHHHHHHHS---------------------CCCSSCCCHHHHHHHHHHHHHHTTS------SCHHHHHHHHHH
2137 T ss_pred cHHHHHHHHHHHHHHH---------------------cCCCCCCChHHHHHHHHHHHHHHcC------CCHHHHHHHHHH
2138 Confidence 3334444433332211 1011111111123444444443321 112222223333
2139
2140
2141 Q NP_000290.2 479 LHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK 558 (747)
2142 Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s 558 (747)
2143 |.++...- ......+.+.++++.++.++.
2144 T Consensus 212 l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~- 240 (466)
2145 T 5D5K_C 212 ISYLTDGP--------------------------------------------------NERIEMVVKKGVVPQLVKLLG- 240 (466)
2146 T ss_dssp HHHHTSSC--------------------------------------------------HHHHHHHHTTTCHHHHHHHHT-
2147 T ss_pred HHHHhcCC--------------------------------------------------chHHHHHHHCChHHHHHHHhc-
2148 Confidence 33332110 001111234567888888887
2149
2150
2151 Q NP_000290.2 559 SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQV 636 (747)
2152 Q Consensus 559 s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~gi 636 (747)
2153 +.++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. +.. ..+...++
2154 T Consensus 241 ~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~ 315 (466)
2155 T 5D5K_C 241 ATELPIVTPALRAIGNIVTGTDE-----QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGL 315 (466)
2156 T ss_dssp CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTC
2157 T ss_pred CCCchHHHHHHHHHHHHhcCCHH-----HHHHHHccChhHhHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCH
2158 Confidence 46778888999999999875332 233334567888999999888889999999999999876 322 23344567
2159
2160
2161 Q NP_000290.2 637 FPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
2162 Q Consensus 637 I~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
2163 ++.+..++.+ .++.++..++.+|.+++.. .......+.+.++++.+..++.+. ++.++..++.+|.+++.
2164 T Consensus 316 ~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~ 386 (466)
2165 T 5D5K_C 316 VPFLVGVLSK------ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK-DTKIIQVILDAISNIFQ 386 (466)
2166 T ss_dssp HHHHHHHHHS------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCS-CHHHHHHHHHHHHHHHH
2167 T ss_pred HHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCcHHHHHHHhhcC-CHHHHHHHHHHHHHHHH
2168 Confidence 8888888876 3678889999999999874 233344455556788888888866 78899999999999987
2169
2170
2171 No 4
2172 >3NMZ_A APC variant protein, Rho guanine; protein-protein complex, armadillo repeats, CELL; 3.01A {Homo sapiens}
2173 Probab=98.55 E-value=1.3e-11 Score=128.97 Aligned_cols=381 Identities=18% Similarity=0.200 Sum_probs=233.7 Template_Neff=12.000
2174
2175 Q NP_000290.2 238 EDIECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQN------------VQQ 305 (747)
2176 Q Consensus 238 ~~~~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~e------------Vr~ 305 (747)
2177 .+..+...+++.++.++...+... ++.+|..++.. ......+...+.++.+..++...+.. ++.
2178 T Consensus 25 ~~~~~~~~~i~~l~~~l~~~~~~~---a~~~L~~l~~~-~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~~~~v~~ 100 (458)
2179 T 3NMZ_A 25 SHLGTKVEMVYSLLSMLGTHDKDD---MSRTLLAMSSS-QDSCISMRQSGCLPLLIQLLHGNDKDSVLLGNSRGSKEARA 100 (458)
2180 T ss_pred HHhHhccchHHHHHHHhCCCCHHH---HHHHHHHHhCC-chHHHHHHHcCcHHHHHHHhcCCChhhcCCCCcccCHHHHH
2181 Confidence 344445556677777776554443 77778777643 23333444556778888888765555 888
2182
2183
2184 Q NP_000290.2 306 AAAGALRNLVFRST---TNKLETRRQNGIREAVSLLR--------------------RTGNAEIQKQLTGLLWNLSSTDE 362 (747)
2185 Q Consensus 306 ~AL~aLs~La~~~~---~~~~~ll~~~IL~~Ll~lL~--------------------ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
2186 .++.+|.+++...+ .....+...+.++.+...+. ...+..++..++.++.+++....
2187 T Consensus 101 ~a~~~L~~l~~~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~L~~l~~~~~ 180 (458)
2188 T 3NMZ_A 101 RASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFDEE 180 (458)
2189 T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHCCcHHHHHHHHHhhhhcccchhhHHHHHHhcCCCChHHHHHHHHHHHHHHcCChH
2190 Confidence 99999999885432 22222222334444444421 01234455667778887776554
2191
2192
2193 Q NP_000290.2 363 LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSA-DAG 440 (747)
2194 Q Consensus 363 ~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 440 (747)
2195 ....+.. ++++.|+.++....... .... ...++++...+..+|.. +... +..
2196 T Consensus 181 ~~~~~~~~~~~~~l~~~l~~~~~~~----~~~~-~~~~~~~~~~a~~~L~~---------------------l~~~~~~~ 234 (458)
2197 T 3NMZ_A 181 HRHAMNELGGLQAIAELLQVDCEMY----GLTN-DHYSITLRRYAGMALTN---------------------LTFGDVAN 234 (458)
2198 T ss_pred HHHHHHHCChHHHHHHHHhccccCC----CCCC-CCCCHHHHHHHHHHHHH---------------------HHcCCHHH
2199 Confidence 4444444 77888888877532211 1110 11244554444444432 1111 111
2200
2201
2202 Q NP_000290.2 441 RQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDK 520 (747)
2203 Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (747)
2204 ++.+....|+++.|...++. .+..-.+.+..+|.|++..-+.
2205 T Consensus 235 ~~~~~~~~~~i~~l~~~l~~------~~~~~~~~a~~~L~~l~~~~~~-------------------------------- 276 (458)
2206 T 3NMZ_A 235 KATLCSMKGCMRALVAQLKS------ESEDLQQVIASVLRNLSWRADV-------------------------------- 276 (458)
2207 T ss_pred HHHHHHhCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHHCCCCh--------------------------------
2208 Confidence 22233445667777666542 2334445555566665431100
2209
2210
2211 Q NP_000290.2 521 MMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK-EKGLPQ 599 (747)
2212 Q Consensus 521 ~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie-~giI~~ 599 (747)
2213 .....+.+.++++.|+.++....+..++..++++|.+++...+. ....+.. .++++.
2214 T Consensus 277 -----------------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~~ 334 (458)
2215 T 3NMZ_A 277 -----------------NSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTE-----NKADICAVDGALAF 334 (458)
2216 T ss_pred -----------------hHHHHHHHCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCch-----hHHHHHHhcChHHH
2217 Confidence 01122356678888888887325667888999999999874332 2233344 778888
2218
2219
2220 Q NP_000290.2 600 IARLLQS----GNSDVVRSGASLLSNMSR---H-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
2221 Q Consensus 600 Ll~LL~s----~d~eVr~~AL~aLsnLa~---~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
2222 |+.++.. .+..++..++.+|.+++. . ... ..+...++++.|+.++.. .++.++..++++|.+++.
2223 T Consensus 335 l~~~l~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~l~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l~~ 408 (458)
2224 T 3NMZ_A 335 LVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKS------HSLTIVSNACGTLWNLSA 408 (458)
2225 T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhCC------CCHHHHHHHHHHHHHHHC
2226 Confidence 8888872 346778889999988863 2 222 233456788888888876 367889999999999998
2227
2228
2229 Q NP_000290.2 671 SQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
2230 Q Consensus 671 ~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
2231 ..+.....+.+.++++.|..++.+. ++.++..++.+|.+++...
2232 T Consensus 409 ~~~~~~~~l~~~~~~~~L~~ll~~~-~~~v~~~a~~~L~~l~~~~ 452 (458)
2233 T 3NMZ_A 409 RNPKDQEALWDMGAVSMLKNLIHSK-HKMIAMGSAAALRNLMANR 452 (458)
2234 T ss_pred CCHHHHHHHHHCCcHHHHHHHHhCC-CHHHHHHHHHHHHHHHcCC
2235 Confidence 5566677777778899999988876 6778999999999998654
2236
2237
2238 No 5
2239 >4UAF_B Importin alpha 1 import receptor; importin karyopherin complex NLS, PROTEIN; HET: PO4; 1.698A {Mus musculus}
2240 Probab=98.54 E-value=1.3e-11 Score=125.71 Aligned_cols=369 Identities=14% Similarity=0.172 Sum_probs=229.2 Template_Neff=13.100
2241
2242 Q NP_000290.2 243 SGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESA-KQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTT 320 (747)
2243 Q Consensus 243 ~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~-~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~ 320 (747)
2244 ....++.+...+.+.++.++..++.++..+....... ...+...++++.++..+. ..++.++..++.++..++.....
2245 T Consensus 11 ~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~ 90 (466)
2246 T 4UAF_B 11 VNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSE 90 (466)
2247 T ss_pred cCcCHHHHHHHHccCCHHHHHHHHHHHHHHHhcCCCCCHHHHHHcCcHHHHHHHhhCCCChHHHHHHHHHHHHHhcCChH
2248 Confidence 4456667777777778888999999998887643221 122333456777777776 34567888899999888764443
2249
2250
2251 Q NP_000290.2 321 NKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVV 398 (747)
2252 Q Consensus 321 ~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~ 398 (747)
2253 ....+...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.+..++..+. .+..
2254 T Consensus 91 ~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----------~~~~ 158 (466)
2255 T 4UAF_B 91 QTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPD-----------LSTL 158 (466)
2256 T ss_pred HHHHHHccChHHHHHHHhc-CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhhCCC-----------cccc
2257 Confidence 3333444457777888876 56778888999999998875432 222233 67777777775421 1112
2258
2259
2260 Q NP_000290.2 399 DPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCV 478 (747)
2261 Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (747)
2262 ++++...+..++..-. .............+++..+...+.. -+..-...+...
2263 T Consensus 159 ~~~~~~~~~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~ 211 (466)
2264 T 4UAF_B 159 ACGYLRNLTWTLSNLC---------------------RNKNPAPPLDAVEQILPTLVRLLHH------NDPEVLADSCWA 211 (466)
2265 T ss_pred cHHHHHHHHHHHHHHH---------------------cCCCCCCChhHHHHHHHHHHHHHcC------CCHHHHHHHHHH
2266 Confidence 3334333333332211 0001111111113344444433321 111222222333
2267
2268
2269 Q NP_000290.2 479 LHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK 558 (747)
2270 Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s 558 (747)
2271 |.++...- ......+.+.++++.++.++.
2272 T Consensus 212 l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~- 240 (466)
2273 T 4UAF_B 212 ISYLTDGP--------------------------------------------------NERIEMVVKKGVVPQLVKLLG- 240 (466)
2274 T ss_pred HHHHhcCC--------------------------------------------------cHHHHHHHHCChHHHHHHHhc-
2275 Confidence 33332110 001112245567888888887
2276
2277
2278 Q NP_000290.2 559 SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQV 636 (747)
2279 Q Consensus 559 s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~gi 636 (747)
2280 +.++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. +.. ..+...++
2281 T Consensus 241 ~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~ 315 (466)
2282 T 4UAF_B 241 ATELPIVTPALRAIGNIVTGTDE-----QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGL 315 (466)
2283 T ss_pred CCChhHHHHHHHHHHHHhcCCHH-----HHHHHhccCHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCH
2284 Confidence 46778888999999999875332 233334567888899999888889999999999999876 322 23344567
2285
2286
2287 Q NP_000290.2 637 FPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
2288 Q Consensus 637 I~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
2289 ++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|.+++.
2290 T Consensus 316 ~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~ 386 (466)
2291 T 4UAF_B 316 VPFLVGVLSK------ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK-DTKIIQVILDAISNIFQ 386 (466)
2292 T ss_pred HHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCcHHHHHHHhhcC-CHHHHHHHHHHHHHHHH
2293 Confidence 8888888876 3678889999999999874 233344455556788888888876 78899999999999987
2294
2295
2296 No 6
2297 >4U5L_A deltaIBB-importin-alpha1; TPX2, inhibitor, TRANSPORT PROTEIN; HET: 3D6; 2.53A {Mus musculus}
2298 Probab=98.52 E-value=1.7e-11 Score=122.96 Aligned_cols=360 Identities=16% Similarity=0.184 Sum_probs=217.1 Template_Neff=13.200
2299
2300 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2301 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
2302 +++.+...+. ..++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++.........
2303 T Consensus 49 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 128 (426)
2304 T 4U5L_A 49 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 128 (426)
2305 T ss_dssp CHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHH
2306 T ss_pred cHHHHHHHhccCCChHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHhcCCChHHHHHHHHHHHHHhcCCHHHHHH
2307 Confidence 4555666665 445678888899998887654433334444567778888888778888999999999988654433333
2308
2309
2310 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAE-----IQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
2311 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~e-----Vr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
2312 +...++++.+...+. ..... ++..++.++..++.......... .++++.+..++..
2313 T Consensus 129 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 191 (426)
2314 T 4U5L_A 129 VIKHGAIDPLLALLA-VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH---------------- 191 (426)
2315 T ss_dssp HHHTTCHHHHHHTTC-SSCGGGSCHHHHHHHHHHHHHHTCCCSSCCCHHHHHHHHHHHHHHTTS----------------
2316 T ss_pred HHHCCcHHHHHHHhh-CCCCchhhHHHHHHHHHHHHHHHcCCCCCCCccHHHHHHHHHHHHHhC----------------
2317 Confidence 334456677777765 32222 67778888888776433222221 2555666665542
2318
2319
2320 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
2321 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
2322 .|+++...+..++..-.... + .....+. -.+++..|...+.. .+..-...+..
2323 T Consensus 192 ~~~~~~~~a~~~l~~l~~~~------~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~a~~ 244 (426)
2324 T 4U5L_A 192 NDPEVLADSCWAISYLTDGP------N--------------ERIEMVV-KKGVVPQLVKLLGA------TELPIVTPALR 244 (426)
2325 T ss_dssp SCHHHHHHHHHHHHHHTSSC------H--------------HHHHHHH-TTTCHHHHHHHHTC------SCHHHHHHHHH
2326 T ss_pred CCHHHHHHHHHHHHHHhhCC------c--------------HHHHHHh-hcChHHHHHHHhcC------CCccHHHHHHH
2327 Confidence 13444444444443211100 0 0000000 12233333333221 11122222333
2328
2329
2330 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
2331 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
2332 .|.++...- ......+.+.++++.+..++.
2333 T Consensus 245 ~l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 274 (426)
2334 T 4U5L_A 245 AIGNIVTGT--------------------------------------------------DEQTQKVIDAGALAVFPSLLT 274 (426)
2335 T ss_dssp HHHHHTTSC--------------------------------------------------HHHHHHHHHTTGGGGHHHHTT
2336 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHhccchHHHHHHHhc
2337 Confidence 333332100 001112245567888888887
2338
2339
2340 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGN 634 (747)
2341 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~ 634 (747)
2342 +.++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...
2343 T Consensus 275 -~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~ 348 (426)
2344 T 4U5L_A 275 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC 348 (426)
2345 T ss_dssp -CSSHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHT
2346 T ss_pred -CCChHHHHHHHHHHHHHhcCCHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhC
2347 Confidence 46778888999999999875332 233334557888899998888888999999999999875 2 22 233445
2348
2349
2350 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS------QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
2351 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~------s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
2352 ++++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.++
2353 T Consensus 349 ~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~-~~~v~~~a~~~l 421 (426)
2354 T 4U5L_A 349 GIIEPLMNLLSA------KDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE-NESVYKASLNLI 421 (426)
2355 T ss_dssp TCHHHHHHGGGS------CCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHGGGGSS-CHHHHHHHHHHH
2356 T ss_pred CcHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHHHH
2357 Confidence 678888888876 3678899999999999763 123333444556788888888776 788898888888
2358
2359
2360 Q NP_000290.2 709 SDMW 712 (747)
2361 Q Consensus 709 snL~ 712 (747)
2362 .++.
2363 T Consensus 422 ~~~~ 425 (426)
2364 T 4U5L_A 422 EKYF 425 (426)
2365 T ss_dssp HHHC
2366 T ss_pred HHHc
2367 Confidence 7764
2368
2369
2370 No 7
2371 >6SA7_B DARPin-Armadillo fusion C8long83; protein fusion, DARPin, Armadillo, shared; 3.3A {synthetic construct}
2372 Probab=98.48 E-value=2.5e-11 Score=127.02 Aligned_cols=136 Identities=24% Similarity=0.253 Sum_probs=93.8 Template_Neff=12.500
2373
2374 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
2375 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
2376 ..+++.+...+.+.++.++..++.+|..++.........+...++++.+...+.+.++.++..++.++..++........
2377 T Consensus 172 ~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~ 251 (510)
2378 T 6SA7_B 172 KKILKDLVKKLSSPNENELQNALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 251 (510)
2379 T ss_dssp HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHH
2380 T ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCChHHHHHHHHcCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHH
2381 Confidence 45666777777777788889999999998765544444444556788888888887888999999999998765443333
2382
2383
2384 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
2385 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
2386 .+...++++.+...+. +.++.++..++.++..++..... ...+.. ++++.|+.++.
2387 T Consensus 252 ~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 309 (510)
2388 T 6SA7_B 252 AVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 309 (510)
2389 T ss_dssp HHHHTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT
2390 T ss_pred HHHHcCcHHHHHHHcc-CCCHHHHHHHHHHHHHHhcCChHHHHHHHHcChHHHHHHHhc
2391 Confidence 3444567777777775 55677888888888888754322 222222 56666666664
2392
2393
2394 No 8
2395 >4RV1_D Engineered Protein OR497; STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE; 2.573A {SYNTHETIC CONSTRUCT}
2396 Probab=98.47 E-value=2.7e-11 Score=120.80 Aligned_cols=362 Identities=20% Similarity=0.254 Sum_probs=220.3 Template_Neff=13.300
2397
2398 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
2399 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
2400 ++.+...+.+.++.++..++.++..+..............++++.+...+.+.++.++..++.++..++...........
2401 T Consensus 4 ~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~ 83 (420)
2402 T 4RV1_D 4 VEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIV 83 (420)
2403 T ss_dssp HHHHHHHHHCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHTTSCSCSSSHHHHHHHHHHHTTSCHHHHHHHH
2404 T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcCcHHHHHHHHHCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
2405 Confidence 44556666677788888999999888765433333333446677777888777788899999999888765433323333
2406
2407
2408 Q NP_000290.2 327 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
2409 Q Consensus 327 ~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
2410 ..++++.+...+. +.++.++..++.++..+..... ....+.. ++++.+..++.. .++++..
2411 T Consensus 84 ~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~~~ 146 (420)
2412 T 4RV1_D 84 DAGGVEVLVKLLT-STDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTS----------------TDSEVQK 146 (420)
2413 T ss_dssp HTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC----------------SCHHHHH
2414 T ss_pred HcChHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCChHHHHHHHHcCHHHHHHHHHhC----------------CCHHHHH
2415 Confidence 3456677777776 5567788889999988876432 2222222 566666666542 1344444
2416
2417
2418 Q NP_000290.2 405 NATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSY 484 (747)
2419 Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (747)
2420 .+..++..-.... + .....+. ..+++..+...++. .+..-...+..+|.++..
2421 T Consensus 147 ~a~~~l~~l~~~~------~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~ 199 (420)
2422 T 4RV1_D 147 EAARALANIASGP------D--------------EAIKAIV-DAGGVEVLVKLLTS------TDSEVQKEAARALANIAS 199 (420)
2423 T ss_dssp HHHHHHHHHHTSC------H--------------HHHHHHH-HTTHHHHHHHHTTC------SSHHHHHHHHHHHHHHHT
2424 T ss_pred HHHHHHHHHhcCC------H--------------HHHHHHH-HCCHHHHHHHHhcC------CCHHHHHHHHHHHHHHhC
2425 Confidence 4443332211000 0 0000000 01333333333221 111111222222222211
2426
2427
2428 Q NP_000290.2 485 RLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDAT 564 (747)
2429 Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eV 564 (747)
2430 .. ......+.+.++++.+...+. +.++.+
2431 T Consensus 200 ~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~~~ 228 (420)
2432 T 4RV1_D 200 GP--------------------------------------------------TSAIKAIVDAGGVEVLVKLLT-STDSEV 228 (420)
2433 T ss_dssp SC--------------------------------------------------HHHHHHHHTTTHHHHHHHHTT-CSCHHH
2434 T ss_pred CC--------------------------------------------------HHHHHHHHHCCHHHHHHHHhh-CCCHHH
2435 Confidence 00 000111234456777888887 467788
2436
2437
2438 Q NP_000290.2 565 LEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL-L-HRVMGNQVFPEVTR 642 (747)
2439 Q Consensus 565 r~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e-~-~~ll~~giI~~Ll~ 642 (747)
2440 +..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.... . ..+...++++.+..
2441 T Consensus 229 ~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ 303 (420)
2442 T 4RV1_D 229 QKEAARALANIASGPDE-----AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVK 303 (420)
2443 T ss_dssp HHHHHHHHHHHHTSCHH-----HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHH
2444 T ss_pred HHHHHHHHHHHhCCCHH-----HHHHHhhccHHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHH
2445 Confidence 88999999998864332 12233456788888888888888899999999999987632 2 23344467777888
2446
2447
2448 Q NP_000290.2 643 LLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
2449 Q Consensus 643 LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
2450 ++.+ .++.++..++.+|.+++...+.....+...+.++.+..++.+. ++.++..++.+|.+++...
2451 T Consensus 304 ~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~a~~~l~~l~~~~ 369 (420)
2452 T 4RV1_D 304 LLTS------TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST-DSEVQKEAARALANIASGP 369 (420)
2453 T ss_dssp HTTC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHHTSC
2454 T ss_pred HccC------CCHHHHHHHHHHHHHHHcChHHHHHHHHHCCHHHHHHHHhCCC-CHHHHHHHHHHHHHHHcCC
2455 Confidence 7776 3678899999999999876444444455556788888888766 7889999999999998764
2456
2457
2458 No 9
2459 >6S9O_F designed Armadillo repeat protein with; peptide binder, repeat protein, designed; HET: CA, EDO; 3.17A {synthetic construct}
2460 Probab=98.47 E-value=2.8e-11 Score=117.85 Aligned_cols=167 Identities=20% Similarity=0.267 Sum_probs=122.0 Template_Neff=13.100
2461
2462 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
2463 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
2464 ..++++.++.++. +.++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.
2465 T Consensus 170 ~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~ 243 (344)
2466 T 6S9O_F 170 DAGALPALVQLLS-SPNEQILQLALWALSNIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIAS 243 (344)
2467 T ss_dssp HTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
2468 T ss_pred hCCcHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCChH-----HHHHHHhcChHHHHHHHccCCCHHHHHHHHHHHHHHHc
2469 Confidence 4456777888887 46777888899999998864332 12333445788888888888888899999999999986
2470
2471
2472 Q NP_000290.2 625 H-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
2473 Q Consensus 625 ~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
2474 . ... ......++++.+..++.+ .++.++..++.+|.+++...+.....+.+.++++.+..++.+. ++.++.
2475 T Consensus 244 ~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~ 316 (344)
2476 T 6S9O_F 244 GGNEQIQAVIDAGALPALVQLLSS------PNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHE-NEKIQK 316 (344)
2477 T ss_dssp SCHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS-CHHHHH
2478 T ss_pred CcHHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHhhCC-CHHHHH
2479 Confidence 5 222 233445677778887766 3678889999999999876555555555556788888888766 788999
2480
2481
2482 Q NP_000290.2 703 AARLLLSDMWSSKELQGVLRQQ 724 (747)
2483 Q Consensus 703 aAL~aLsnL~~~~~~~~~~~~~ 724 (747)
2484 .++.+|.+++...+.....+..
2485 T Consensus 317 ~a~~~l~~l~~~~~~~~~~~~~ 338 (344)
2486 T 6S9O_F 317 EAQEALEKLQSHGSGGSGKRKR 338 (344)
2487 T ss_dssp HHHHHHHHHHHCSCCCCCCCBC
2488 T ss_pred HHHHHHHHHHhcccCCCchhcc
2489 Confidence 9999999998776654444333
2490
2491
2492 No 10
2493 >5MFD_C YIIIM''6AII, Capsid decoration protein,pD_(KR)5; Designed armadillo repeat protein, peptide; HET: CA; 2.3A {synthetic construct}
2494 Probab=98.46 E-value=3e-11 Score=116.21 Aligned_cols=318 Identities=20% Similarity=0.263 Sum_probs=178.1 Template_Neff=13.300
2495
2496 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
2497 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
2498 +++.+...+.+.++.++..++.++..+....+.....+...++++.+...+.+.++.++..++.++..+..........+
2499 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 84 (328)
2500 T 5MFD_C 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 84 (328)
2501 T ss_dssp CHHHHHHHHHSSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
2502 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCcHHHHHHH
2503 Confidence 45556666666777888889999988876544333334445677788888877778888889998888875433322223
2504
2505
2506 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
2507 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
2508 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.. .++++.
2509 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~~ 147 (328)
2510 T 5MFD_C 85 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSS----------------PNEQIL 147 (328)
2511 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGC----------------SCHHHH
2512 T ss_pred hhcCHHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHhcC----------------CCHHHH
2513 Confidence 33345666666665 4455666777777777665321 1111111 334444433321 011111
2514
2515
2516 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
2517 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
2518 .. ++..|.++.
2519 T Consensus 148 ~~---------------------------------------------------------------------a~~~l~~l~ 158 (328)
2520 T 5MFD_C 148 QE---------------------------------------------------------------------ALWTLGNIA 158 (328)
2521 T ss_dssp HH---------------------------------------------------------------------HHHHHHHHT
2522 T ss_pred HH---------------------------------------------------------------------HHHHHHHHH
2523 Confidence 11 111222221
2524
2525
2526 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
2527 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
2528 ...+ .....+.+.++++.++.++. +.++.
2529 T Consensus 159 ~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~~~~ 187 (328)
2530 T 5MFD_C 159 SGGN--------------------------------------------------EQIQAVIDAGALPALVQLLS-SPNEQ 187 (328)
2531 T ss_dssp TSCH--------------------------------------------------HHHHHHHHTTHHHHHHHGGG-CSCHH
2532 T ss_pred cCCH--------------------------------------------------HHHHHHHHCCcHHHHHHHhc-CCCHH
2533 Confidence 0000 00000122345556666665 35556
2534
2535
2536 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEVT 641 (747)
2537 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~Ll 641 (747)
2538 ++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.++.+++.. +.. ......++++.+.
2539 T Consensus 188 ~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~ 262 (328)
2540 T 5MFD_C 188 ILQEALWTLGNIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALV 262 (328)
2541 T ss_dssp HHHHHHHHHHHHHTSCHH-----HHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHH
2542 T ss_pred HHHHHHHHHHHHHcCCHH-----HHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHH
2543 Confidence 666777777777654221 122223445667777777666667777777777777654 222 2223345666666
2544
2545
2546 Q NP_000290.2 642 RLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
2547 Q Consensus 642 ~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
2548 .++.+ .++.++..++.+|.+++...+.....+.+.++++.+..++.+. ++.++..++.+|.+++
2549 T Consensus 263 ~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~ 326 (328)
2550 T 5MFD_C 263 QLLSS------PNEQILQEALWTLGNIASGGNEQKQAVKEAGALEKLEQLQSHE-NEKIQKEAQEALEKLQ 326 (328)
2551 T ss_dssp HGGGC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHH
2552 T ss_pred HHhcC------CCHHHHHHHHHHHHHHhCCcHHHHHHHHHCCHHHHHHHHhhCC-CHHHHHHHHHHHHHHh
2553 Confidence 66655 2566777777777777765444444444445667777777655 6677777777777665
2554
2555
2556 No 11
2557 >4MZ6_E Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial, Importin; ARM repeat, protein transport, Importin; 1.88A {Mus musculus}
2558 Probab=98.45 E-value=3.5e-11 Score=125.01 Aligned_cols=368 Identities=14% Similarity=0.178 Sum_probs=227.8 Template_Neff=12.800
2559
2560 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAK-QQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTN 321 (747)
2561 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~-~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~~~ 321 (747)
2562 ..+++.+...+.+.++.++..++.++..+........ ..+...++++.+...+...+ +.++..++.++..++......
2563 T Consensus 56 ~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~ 135 (509)
2564 T 4MZ6_E 56 NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQ 135 (509)
2565 T ss_dssp TCCHHHHHHHHTTCCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHH
2566 T ss_pred hhhHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCCHHHHHHCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhCCCHHH
2567 Confidence 4456667777777788889999999988876433211 22333456777777776543 678888999998887654433
2568
2569
2570 Q NP_000290.2 322 KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVD 399 (747)
2571 Q Consensus 322 ~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~ 399 (747)
2572 ...+...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.|+.++..... +..+
2573 T Consensus 136 ~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----------~~~~ 203 (509)
2574 T 4MZ6_E 136 TKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDL-----------STLA 203 (509)
2575 T ss_dssp HHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCG-----------GGSC
2576 T ss_pred HHHHHhcChHHHHHHHhc-CCChhHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhCCCh-----------hhhh
2577 Confidence 333444467777888886 56778889999999998875432 222223 677777777764211 1122
2578
2579
2580 Q NP_000290.2 400 PEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVL 479 (747)
2581 Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (747)
2582 +++...+..+|..-. .............+++..+...+.. -+......+...|
2583 T Consensus 204 ~~~~~~~~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l 256 (509)
2584 T 4MZ6_E 204 CGYLRNLTWTLSNLC---------------------RNKNPAPPLDAVEQILPTLVRLLHH------NDPEVLADSCWAI 256 (509)
2585 T ss_dssp HHHHHHHHHHHHHHH---------------------CCCSSCCCHHHHHHHHHHHHHHTTC------SCHHHHHHHHHHH
2586 T ss_pred HHHHHHHHHHHHHHh---------------------cCCCCCCCHHHHHHHHHHHHHHHhC------CCHHHHHHHHHHH
2587 Confidence 333333333332211 0000011111112334444333321 1111222222223
2588
2589
2590 Q NP_000290.2 480 HNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKS 559 (747)
2591 Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss 559 (747)
2592 .++...- ......+.+.++++.|+.++. +
2593 T Consensus 257 ~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~ 285 (509)
2594 T 4MZ6_E 257 SYLTDGP--------------------------------------------------NERIEMVVKKGVVPQLVKLLG-A 285 (509)
2595 T ss_dssp HHHTSSS--------------------------------------------------HHHHHHHHTTTCHHHHHHHHT-C
2596 T ss_pred HHHhcCC--------------------------------------------------hHHHHHHhhCChHHHHHHHhc-C
2597 Confidence 3222100 001112244567888888887 4
2598
2599
2600 Q NP_000290.2 560 KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVF 637 (747)
2601 Q Consensus 560 ~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI 637 (747)
2602 .++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. +.. ..+...+++
2603 T Consensus 286 ~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~ 360 (509)
2604 T 4MZ6_E 286 TELPIVTPALRAIGNIVTGTDE-----QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLV 360 (509)
2605 T ss_dssp SCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHH
2606 T ss_pred CCcchHHHHHHHHHHHhcCCHH-----HHHHHHhCChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHH
2607 Confidence 6778888999999999875332 233334567888899999888889999999999999876 322 233445678
2608
2609
2610 Q NP_000290.2 638 PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
2611 Q Consensus 638 ~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
2612 +.++.++.+ .++.++..++.+|.+++.. .+.....+.+.++++.|..++.+. ++.++..++.+|.+++.
2613 T Consensus 361 ~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~ 430 (509)
2614 T 4MZ6_E 361 PFLVGVLSK------ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK-DTKIIQVILDAISNIFQ 430 (509)
2615 T ss_dssp HHHHHHHHS------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCS-CHHHHHHHHHHHHHHHH
2616 T ss_pred HHHHHHhcC------CCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCCHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
2617 Confidence 888888876 3678899999999999874 234444555556788888888876 78899999999999987
2618
2619
2620 No 12
2621 >5UMZ_B Importin subunit alpha-1, TNRC6A; mRNA decay, miRNA ARM repeat; HET: GOL; 1.9A {Mus musculus}
2622 Probab=98.45 E-value=3.5e-11 Score=125.01 Aligned_cols=368 Identities=14% Similarity=0.178 Sum_probs=227.8 Template_Neff=12.800
2623
2624 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAK-QQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTN 321 (747)
2625 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~-~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~~~ 321 (747)
2626 ..+++.+...+.+.++.++..++.++..+........ ..+...++++.+...+...+ +.++..++.++..++......
2627 T Consensus 56 ~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~ 135 (509)
2628 T 5UMZ_B 56 NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQ 135 (509)
2629 T ss_dssp SCCHHHHHHHHTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHH
2630 T ss_pred hhhHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCCHHHHHHCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhCCCHHH
2631 Confidence 4456667777777788889999999988876433211 22333456777777776543 678888999998887654433
2632
2633
2634 Q NP_000290.2 322 KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVD 399 (747)
2635 Q Consensus 322 ~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~ 399 (747)
2636 ...+...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.|+.++..... +..+
2637 T Consensus 136 ~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----------~~~~ 203 (509)
2638 T 5UMZ_B 136 TKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDL-----------STLA 203 (509)
2639 T ss_dssp HHHHHHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHHTCSSCG-----------GGSC
2640 T ss_pred HHHHHhcChHHHHHHHhc-CCChhHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhCCCh-----------hhhh
2641 Confidence 333444467777888886 56778889999999998875432 222223 677777777764211 1122
2642
2643
2644 Q NP_000290.2 400 PEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVL 479 (747)
2645 Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (747)
2646 +++...+..+|..-. .............+++..+...+.. -+......+...|
2647 T Consensus 204 ~~~~~~~~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l 256 (509)
2648 T 5UMZ_B 204 CGYLRNLTWTLSNLC---------------------RNKNPAPPLDAVEQILPTLVRLLHH------NDPEVLADSCWAI 256 (509)
2649 T ss_dssp HHHHHHHHHHHHHHH---------------------CCCSSCCCHHHHHHHHHHHHHHTTS------SCHHHHHHHHHHH
2650 T ss_pred HHHHHHHHHHHHHHh---------------------cCCCCCCCHHHHHHHHHHHHHHHhC------CCHHHHHHHHHHH
2651 Confidence 333333333332211 0000011111112334444333321 1111222222223
2652
2653
2654 Q NP_000290.2 480 HNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKS 559 (747)
2655 Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss 559 (747)
2656 .++...- ......+.+.++++.|+.++. +
2657 T Consensus 257 ~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~ 285 (509)
2658 T 5UMZ_B 257 SYLTDGP--------------------------------------------------NERIEMVVKKGVVPQLVKLLG-A 285 (509)
2659 T ss_dssp HHHTSSC--------------------------------------------------HHHHHHHHTTTCHHHHHHHHT-C
2660 T ss_pred HHHhcCC--------------------------------------------------hHHHHHHhhCChHHHHHHHhc-C
2661 Confidence 3222100 001112244567888888887 4
2662
2663
2664 Q NP_000290.2 560 KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVF 637 (747)
2665 Q Consensus 560 ~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI 637 (747)
2666 .++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. +.. ..+...+++
2667 T Consensus 286 ~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~ 360 (509)
2668 T 5UMZ_B 286 TELPIVTPALRAIGNIVTGTDE-----QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLV 360 (509)
2669 T ss_dssp SCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHH
2670 T ss_pred CCcchHHHHHHHHHHHhcCCHH-----HHHHHHhCChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHH
2671 Confidence 6778888999999999875332 233334567888899999888889999999999999876 322 233445678
2672
2673
2674 Q NP_000290.2 638 PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
2675 Q Consensus 638 ~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
2676 +.++.++.+ .++.++..++.+|.+++.. .+.....+.+.++++.|..++.+. ++.++..++.+|.+++.
2677 T Consensus 361 ~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~ 430 (509)
2678 T 5UMZ_B 361 PFLVGVLSK------ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK-DTKIIQVILDAISNIFQ 430 (509)
2679 T ss_dssp HHHHHHHHS------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCS-CHHHHHHHHHHHHHHHH
2680 T ss_pred HHHHHHhcC------CCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCCHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
2681 Confidence 888888876 3678899999999999874 234444555556788888888876 78899999999999987
2682
2683
2684 No 13
2685 >2JDQ_A IMPORTIN ALPHA-1 SUBUNIT, POLYMERASE BASIC; TRANSPORT, PB2 SUBUNIT, NUCLEAR PROTEIN; 2.2A {HOMO SAPIENS}
2686 Probab=98.45 E-value=3.6e-11 Score=122.13 Aligned_cols=367 Identities=14% Similarity=0.163 Sum_probs=226.8 Template_Neff=13.000
2687
2688 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESA--KQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTT 320 (747)
2689 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~--~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~ 320 (747)
2690 +.+++.+...+.+.++.++..++.+|..+....... ...+...++++.+...+.. .++.++..++.++..++.....
2691 T Consensus 19 ~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~ 98 (450)
2692 T 2JDQ_A 19 GVITSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSL 98 (450)
2693 T ss_dssp ---CHHHHHHHHSSCHHHHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHH
2694 T ss_pred CcccHHHHHHHhcCCHHHHHHHHHHHHHHHccCCCCCHhHHhcCcchHHHHHHHHccCCCHHHHHHHHHHHHHHhCCCcH
2695 Confidence 445567777788788889999999999887532211 1222224667777777765 5677888899999888765443
2696
2697
2698 Q NP_000290.2 321 NKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVV 398 (747)
2699 Q Consensus 321 ~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~ 398 (747)
2700 ....+...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.++.++... .
2701 T Consensus 99 ~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~ 162 (450)
2702 T 2JDQ_A 99 QTRIVIQAGAVPIFIELLS-SEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQ---------------N 162 (450)
2703 T ss_dssp HHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSC---------------C
2704 T ss_pred HHHHHHHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHhhc---------------c
2705 Confidence 3333333467777888876 5567888899999998887543 2223333 6777777776431 1
2706
2707
2708 Q NP_000290.2 399 DPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCV 478 (747)
2709 Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (747)
2710 ++++...+..++..-.. ............+++..+...+.. -+..-...+...
2711 T Consensus 163 ~~~~~~~a~~~l~~l~~---------------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~ 215 (450)
2712 T 2JDQ_A 163 RLTMTRNAVWALSNLCR---------------------GKSPPPEFAKVSPCLNVLSWLLFV------SDTDVLADACWA 215 (450)
2713 T ss_dssp CHHHHHHHHHHHHHHHC---------------------CSSSCCCGGGTGGGHHHHHHHTTC------CCHHHHHHHHHH
2714 T ss_pred chhHHHHHHHHHHHHhc---------------------CCCCCchhhhhhhHHHHHHHHhcC------CCHHHHHHHHHH
2715 Confidence 23443344333322110 000111111222333333332221 111122222223
2716
2717
2718 Q NP_000290.2 479 LHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK 558 (747)
2719 Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s 558 (747)
2720 |.++...- ......+.+.++++.++.++.
2721 T Consensus 216 l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~- 244 (450)
2722 T 2JDQ_A 216 LSYLSDGP--------------------------------------------------NDKIQAVIDAGVCRRLVELLM- 244 (450)
2723 T ss_dssp HHHHTSSS--------------------------------------------------HHHHHHHHHTTTHHHHHHHTT-
2724 T ss_pred HHHHhcCC--------------------------------------------------HHHHHHHHHCCHHHHHHHHHc-
2725 Confidence 33222110 001112245567888888887
2726
2727
2728 Q NP_000290.2 559 SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQV 636 (747)
2729 Q Consensus 559 s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~gi 636 (747)
2730 +.++.++..++.+|.+++...+. ....+.+.++++.+..++.+.++.++..++.+|.+++... .. ......++
2731 T Consensus 245 ~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~ 319 (450)
2732 T 2JDQ_A 245 HNDYKVVSPALRAVGNIVTGDDI-----QTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANI 319 (450)
2733 T ss_dssp CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTH
2734 T ss_pred CCCHHHHHHHHHHHHHHhhCChH-----HHHHHhhcchHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCH
2735 Confidence 46778888999999999875332 2233345578888999998888889999999999998762 22 23344567
2736
2737
2738 Q NP_000290.2 637 FPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQ-PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
2739 Q Consensus 637 I~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s-~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
2740 ++.+..++.+ .++.++..++.+|.+++... +.....+.+.++++.+..++.+. ++.++..++.+|.+++...
2741 T Consensus 320 ~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~~ 392 (450)
2742 T 2JDQ_A 320 FPALISILQT------AEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVM-DSKIVQVALNGLENILRLG 392 (450)
2743 T ss_dssp HHHHHHHHHH------SCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSS-CHHHHHHHHHHHHHHHHHH
2744 T ss_pred HHHHHHHHhc------CCHHHHHHHHHHHHHHhcCCCHHHHHHHHHCCcHHHHHHHhhCC-CHHHHHHHHHHHHHHHHHh
2745 Confidence 8888888876 36788899999999998752 34445555556788888888876 7889999999999998765
2746
2747
2748 Q NP_000290.2 716 E 716 (747)
2749 Q Consensus 716 ~ 716 (747)
2750 +
2751 T Consensus 393 ~ 393 (450)
2752 T 2JDQ_A 393 E 393 (450)
2753 T ss_dssp H
2754 T ss_pred H
2755 Confidence 4
2756
2757
2758 No 14
2759 >4E4V_A Importin subunit alpha-2; armadillo repeat, karyopherin, importin, nuclear; HET: GOL, DTT; 2.5283A {Homo sapiens}
2760 Probab=98.45 E-value=3.6e-11 Score=124.32 Aligned_cols=364 Identities=17% Similarity=0.189 Sum_probs=218.6 Template_Neff=12.700
2761
2762 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2763 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
2764 +++.+...+.+.+ +.++..++.++..++.........+...++++.+..++.+.++.++..++.++..++.........
2765 T Consensus 76 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 155 (485)
2766 T 4E4V_A 76 LIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDL 155 (485)
2767 T ss_dssp CHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTCHHHHHH
2768 T ss_pred cHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChHHHHHHHhcChHHHHHHHhcCCChhHHHHHHHHHHHHhcCCHHHHHH
2769 Confidence 4555666665443 678888889988887654433334444567778888888777888999999999888654432333
2770
2771
2772 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNA-----EIQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
2773 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~-----eVr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
2774 +...++++.+...+. .... .++..++.++..++.......... .++++.+..++..
2775 T Consensus 156 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 218 (485)
2776 T 4E4V_A 156 VIKYGAVDPLLALLA-VPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHH---------------- 218 (485)
2777 T ss_dssp HHHTTCHHHHHHTTC-SSCGGGSCHHHHHHHHHHHHHHTCCCSSCCCHHHHHHHHHHHHHHTTS----------------
2778 T ss_pred HHHCCcHHHHHHHHh-CCCcccchHHHHHHHHHHHHHHHhCCCCCCCHHHHhcHHHHHHHHhcC----------------
2779 Confidence 333456666776665 2222 567778888888876443222222 2556666666542
2780
2781
2782 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
2783 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
2784 .|+++...+..+|..-.. .+......---.+++..|...+.. .+..-...+..
2785 T Consensus 219 ~~~~~~~~a~~~l~~l~~---------------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~ 271 (485)
2786 T 4E4V_A 219 DDPEVLADTCWAISYLTD---------------------GPNERIGMVVKTGVVPQLVKLLGA------SELPIVTPALR 271 (485)
2787 T ss_dssp CCHHHHHHHHHHHHHHTS---------------------SCHHHHHHHHTTTCHHHHHHHHTC------SCHHHHHHHHH
2788 T ss_pred CCHHHHHHHHHHHHHHhc---------------------CChHHhhHHhhCChHHHHHHHhcC------CChHHHHHHHH
2789 Confidence 134444444444432110 000000000012233333333221 11222223333
2790
2791
2792 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
2793 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
2794 +|.++...- ......+.+.++++.|+.++.
2795 T Consensus 272 ~l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 301 (485)
2796 T 4E4V_A 272 AIGNIVTGT--------------------------------------------------DEQTQVVIDAGALAVFPSLLT 301 (485)
2797 T ss_dssp HHHHHTTSC--------------------------------------------------HHHHHHHHHTTGGGGHHHHHT
2798 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHHhCChHHHHHHHhc
2799 Confidence 333332100 001112234567888888887
2800
2801
2802 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGN 634 (747)
2803 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~ 634 (747)
2804 +.++.++..++.+|.+++...+. ....+...++++.|+.++.+.++.++..++.+|.+++.. . .. ..+...
2805 T Consensus 302 -~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~ 375 (485)
2806 T 4E4V_A 302 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHC 375 (485)
2807 T ss_dssp -CSSHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHT
2808 T ss_pred -CCCHHHHHHHHHHHHHHcCCCHH-----HHHHHHHCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCHHHHHHHHhC
2809 Confidence 46778888999999999875332 233334557888899999888888999999999999875 2 12 233445
2810
2811
2812 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQ------PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
2813 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s------~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
2814 ++++.+..++.+ .++.++..++.+|.+++... +.....+.+.++++.|..++.+. ++.++..++.+|
2815 T Consensus 376 ~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l 448 (485)
2816 T 4E4V_A 376 GIIEPLMNLLTA------KDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQNHE-NESVYRASLSLI 448 (485)
2817 T ss_dssp TCHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTHHHHHHTTCCTT-SHHHHHHHHHHH
2818 T ss_pred CcHHHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHHHH
2819 Confidence 677888888776 36788999999999998731 22333344456788888888766 788999999999
2820
2821
2822 Q NP_000290.2 709 SDMWSSKE 716 (747)
2823 Q Consensus 709 snL~~~~~ 716 (747)
2824 .+++...+
2825 T Consensus 449 ~~l~~~~~ 456 (485)
2826 T 4E4V_A 449 EKYFSVEE 456 (485)
2827 T ss_dssp HHHCC---
2828 T ss_pred HHHcCccc
2829 Confidence 99986543
2830
2831
2832 No 15
2833 >4B18_A IMPORTIN SUBUNIT ALPHA-1, TELOMERASE REVERSE; TRANSPORT PROTEIN - PEPTIDE COMPLEX; 2.52A {HOMO SAPIENS}
2834 Probab=98.44 E-value=4e-11 Score=121.64 Aligned_cols=368 Identities=14% Similarity=0.162 Sum_probs=227.4 Template_Neff=13.000
2835
2836 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES--AKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTT 320 (747)
2837 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~--~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~ 320 (747)
2838 +.+++.+...+.+.++.++..++.+|..+...... ....+...++++.+...+.. .++.++..++.++..++.....
2839 T Consensus 16 ~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~ 95 (447)
2840 T 4B18_A 16 GVITSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSL 95 (447)
2841 T ss_dssp CSSCHHHHHHHTSSCHHHHHHHHHHHHHHHHCSSCCCHHHHHTSTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHTSSCHH
2842 T ss_pred CCCcHHHHHHHhcCCHHHHHHHHHHHHHHhCCCCCCCHhHHhcCccHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCcH
2843 Confidence 44556677777777888899999999888753221 11222224667777777765 5677888899999888765433
2844
2845
2846 Q NP_000290.2 321 NKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVV 398 (747)
2847 Q Consensus 321 ~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~ 398 (747)
2848 ....+...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|+.++... .
2849 T Consensus 96 ~~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~ 159 (447)
2850 T 4B18_A 96 QTRIVIQAGAVPIFIELLS-SEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQ---------------N 159 (447)
2851 T ss_dssp HHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGCT---------------T
2852 T ss_pred HHHHHHHcChHHHHHHHhh-CCCHHHHHHHHHHHHHHHccChhHHHHHHHCCcHHHHHHHhhcC---------------C
2853 Confidence 3223333467777888776 5567888899999998887543 2223333 6677777766431 1
2854
2855
2856 Q NP_000290.2 399 DPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCV 478 (747)
2857 Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (747)
2858 ++++...+..+|..-. .............+++..+...++. -+......+...
2859 T Consensus 160 ~~~~~~~~~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~ 212 (447)
2860 T 4B18_A 160 RLTMTRNAVWALSNLC---------------------RGKSPPPEFAKVSPCLNVLSWLLFV------SDTDVLADACWA 212 (447)
2861 T ss_dssp CHHHHHHHHHHHHHHH---------------------CCSSSCCCHHHHGGGHHHHHHHTTS------CCHHHHHHHHHH
2862 T ss_pred ChhHHHHHHHHHHHHh---------------------cCCCCCCcccccccHHHHHHHHhhC------CCHHHHHHHHHH
2863 Confidence 2344333333332211 0000111111122333333322211 111112222222
2864
2865
2866 Q NP_000290.2 479 LHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK 558 (747)
2867 Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s 558 (747)
2868 |.++...- ......+.+.++++.++.++.
2869 T Consensus 213 l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~- 241 (447)
2870 T 4B18_A 213 LSYLSDGP--------------------------------------------------NDKIQAVIDAGVCRRLVELLM- 241 (447)
2871 T ss_dssp HHHHTSSS--------------------------------------------------HHHHHHHHHTTCHHHHHHHTT-
2872 T ss_pred HHHHhcCC--------------------------------------------------HHHHHHHHHCCHHHHHHHHHc-
2873 Confidence 32222100 001112245567888888887
2874
2875
2876 Q NP_000290.2 559 SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQV 636 (747)
2877 Q Consensus 559 s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~gi 636 (747)
2878 +.++.++..++.+|.+++...+. ....+.+.++++.|..++.+.++.++..++.+|.+++... .. ......++
2879 T Consensus 242 ~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~ 316 (447)
2880 T 4B18_A 242 HNDYKVVSPALRAVGNIVTGDDI-----QTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANI 316 (447)
2881 T ss_dssp CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTH
2882 T ss_pred CCCHHHHHHHHHHHHHHhcCChH-----HHHHHhhcchHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCh
2883 Confidence 46778888999999999875332 2233345578888999998888889999999999998762 22 23344567
2884
2885
2886 Q NP_000290.2 637 FPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
2887 Q Consensus 637 I~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
2888 ++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|.+++...
2889 T Consensus 317 ~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~~ 389 (447)
2890 T 4B18_A 317 FPALISILQT------AEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVM-DSKIVQVALNGLENILRLG 389 (447)
2891 T ss_dssp HHHHHHHHHH------SCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSS-CHHHHHHHHHHHHHHHHHH
2892 T ss_pred HHHHHHHHhc------CCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCcHHHHHHHhhCC-CHHHHHHHHHHHHHHHHHh
2893 Confidence 8888888876 3678899999999999875 234445555556788888888876 7889999999999998765
2894
2895
2896 Q NP_000290.2 716 EL 717 (747)
2897 Q Consensus 716 ~~ 717 (747)
2898 +.
2899 T Consensus 390 ~~ 391 (447)
2900 T 4B18_A 390 EQ 391 (447)
2901 T ss_dssp HH
2902 T ss_pred HH
2903 Confidence 43
2904
2905
2906 No 16
2907 >4XZR_B Heh1-NLS, Kap60; karyopherins nuclear import ; 2.25A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
2908 Probab=98.43 E-value=4.3e-11 Score=119.82 Aligned_cols=363 Identities=16% Similarity=0.214 Sum_probs=223.0 Template_Neff=13.200
2909
2910 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTNKLET 325 (747)
2911 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
2912 +.+...+.+.++.++..++..+..++..... ........++++.+...+...+ +.++..++.++..++.........+
2913 T Consensus 4 ~~l~~~l~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 83 (423)
2914 T 4XZR_B 4 PQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVV 83 (423)
2915 T ss_dssp SSSSTTTSSSCHHHHHHHHHHHHHHHSCSSSCCHHHHHTTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHHTSCHHHHHHH
2916 T ss_pred hhHhhhcChHhHHHHHHHHHHHHHHHcCCCCCchHHHHhCCcHHHHHHHhhCCCCHHHHHHHHHHHHHHhCCCchhhhHH
2917 Confidence 4455566667777888888888877654321 1222333466777777776543 6778889999988876543333333
2918
2919
2920 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
2921 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
2922 ...++++.+...+. +.++.++..++.++..++... .....+.. ++++.|..++... ++++.
2923 T Consensus 84 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v~ 146 (423)
2924 T 4XZR_B 84 VDADAVPLFIQLLY-TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN----------------KPSLI 146 (423)
2925 T ss_dssp HHTTCHHHHHHHHH-HSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSC----------------CHHHH
2926 T ss_pred cccchHHHHHHHHh-CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHHhcC----------------CHHHH
2927 Confidence 33467777777776 567788899999999988753 22233333 6677777766521 34444
2928
2929
2930 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
2931 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
2932 ..+..++..-.. .........-..+.++.|...++. .+......+...|.++.
2933 T Consensus 147 ~~a~~~l~~l~~---------------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~ 199 (423)
2934 T 4XZR_B 147 RTATWTLSNLCR---------------------GKKPQPDWSVVSQALPTLAKLIYS------MDTETLVDACWAISYLS 199 (423)
2935 T ss_dssp HHHHHHHHHHHC---------------------CCTTCCCHHHHGGGHHHHHHHTTC------SCHHHHHHHHHHHHHHT
2936 T ss_pred HHHHHHHHHHHc---------------------CCCCCCChHHhccHHHHHHHHhhC------CCHHHHHHHHHHHHHHh
2937 Confidence 444444432111 000001111122334444333321 11112222222333322
2938
2939
2940 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
2941 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
2942 .. +......+.+.++++.++.++. +.++.
2943 T Consensus 200 ~~--------------------------------------------------~~~~~~~~~~~~~~~~l~~~l~-~~~~~ 228 (423)
2944 T 4XZR_B 200 DG--------------------------------------------------PQEAIQAVIDVRIPKRLVELLS-HESTL 228 (423)
2945 T ss_dssp SS--------------------------------------------------SHHHHHHHHHTTHHHHHHHHTT-CSCHH
2946 T ss_pred cC--------------------------------------------------CHHHHHHHHhcCHHHHHHHHhc-CCCHH
2947 Confidence 11 0011122345567888888887 46778
2948
2949
2950 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFPEVT 641 (747)
2951 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~~Ll 641 (747)
2952 ++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++... .. ..+...++++.+.
2953 T Consensus 229 ~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~ 303 (423)
2954 T 4XZR_B 229 VQTPALRAVGNIVTGNDL-----QTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLV 303 (423)
2955 T ss_dssp HHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHH
2956 T ss_pred HHHHHHHHHHHHHcCCHH-----HHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHH
2957 Confidence 888999999999865332 2223334578888888888888889999999999998762 22 3334556778888
2958
2959
2960 Q NP_000290.2 642 RLLTSHTGNTSNSEDILSSACYTVRNLMASQP---QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKEL 717 (747)
2961 Q Consensus 642 ~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~---e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
2962 .++.+ .++.++..++.+|.+++.... .....+.+.++++.+..++.+. ++.++..++.+|.+++...+.
2963 T Consensus 304 ~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~~~~~ 375 (423)
2964 T 4XZR_B 304 KLLEV------AEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIA-DNRIIEVTLDALENILKMGEA 375 (423)
2965 T ss_dssp HHHHH------SCHHHHHHHHHHHHHHHHGGGTCHHHHHHHHHTTCHHHHHHHTTTS-CHHHHHHHHHHHHHHHHHHHH
2966 T ss_pred HHHHh------CCchHHHHHHHHHHHHHhCCCCCHHHHHHHHHCCcHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHHHH
2967 Confidence 88866 367889999999999987532 2234445556788888888876 788899999999999876554
2968
2969
2970 No 17
2971 >5XZX_A Importin subunit alpha-3, Ran-binding protein; nuclear import, TRANSPORT PROTEIN; 3.0A {Homo sapiens}
2972 Probab=98.43 E-value=4.3e-11 Score=119.52 Aligned_cols=133 Identities=19% Similarity=0.169 Sum_probs=87.0 Template_Neff=13.200
2973
2974 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2975 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
2976 ++.+...+.+.++.++..++.+|..+...... ....+...++++.+...+. ..++.++..++.++..++.........
2977 T Consensus 4 ~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 83 (416)
2978 T 5XZX_A 4 LEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQA 83 (416)
2979 T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHTTSSSSSCCHHHHHTTTCHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHH
2980 T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHcCcHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCChHHHHH
2981 Confidence 44566666677778888999999888764321 1122333456777777776 456778888899998887654333333
2982
2983
2984 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVI 380 (747)
2985 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~ 380 (747)
2986 +...++++.+...+. +.++.++..++.++..++... .....+.. ++++.|..++.
2987 T Consensus 84 ~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 140 (416)
2988 T 5XZX_A 84 VVQSNAVPLFLRLLH-SPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFIS 140 (416)
2989 T ss_dssp HHHTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHTCHHHHTTSCS
2990 T ss_pred HHhcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCccHHHHHHhcC
2991 Confidence 334457777777776 567788899999999988652 22222333 66677776664
2992
2993
2994 No 18
2995 >1JDH_A BETA-CATENIN, hTcf-4; BETA-CATENIN, TCF4, PROTEIN-PROTEIN COMPLEX, TRANSCRIPTION; 1.9A {Homo sapiens} SCOP: a.118.1.1
2996 Probab=98.42 E-value=4.4e-11 Score=123.86 Aligned_cols=378 Identities=19% Similarity=0.226 Sum_probs=227.0 Template_Neff=13.100
2997
2998 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2999 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3000 .+++.+...+.+.++.++..++.++..++.........+...++++.+...+.+.++.++..++.++..++.........
3001 T Consensus 101 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 180 (529)
3002 T 1JDH_A 101 GGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLI 180 (529)
3003 T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHH
3004 T ss_pred CCHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCcchHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHH
3005 Confidence 34556666666667788888999998887654333333334567777888887777888899999999888544433333
3006
3007
3008 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
3009 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
3010 +...++++.+...+....+..++..++.++..+.........+.. ++++.+..++... ++++.
3011 T Consensus 181 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~ 244 (529)
3012 T 1JDH_A 181 ILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP----------------SQRLV 244 (529)
3013 T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSS----------------CHHHH
3014 T ss_pred HHHCChhHHHHHHHccCCcHHHHHHHHHHHHHHhcCCccHHHHHHCCHHHHHHHHccCC----------------CHHHH
3015 Confidence 444457777777776333567888888888888875443333333 6667776666432 23333
3016
3017
3018 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
3019 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
3020 ..+..++..-. ........+ .+++..+...++. -+..-...+...|.++.
3021 T Consensus 245 ~~~~~~l~~l~---------------------~~~~~~~~~---~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 294 (529)
3022 T 1JDH_A 245 QNCLWTLRNLS---------------------DAATKQEGM---EGLLGTLVQLLGS------DDINVVTCAAGILSNLT 294 (529)
3023 T ss_dssp HHHHHHHHHHH---------------------TTCTTCSCC---HHHHHHHHHHTTC------SCHHHHHHHHHHHHHHT
3024 T ss_pred HHHHHHHHHHc---------------------chhhhHHHH---chHHHHHHHHhCC------CCHHHHHHHHHHHHHHh
3025 Confidence 33333332110 000000001 2334444333321 11111222223333332
3026
3027
3028 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK-SKKD 562 (747)
3029 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s-s~d~ 562 (747)
3030 ... ......+.+.++++.++..+.. ..++
3031 T Consensus 295 ~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~~~~~~~ 324 (529)
3032 T 1JDH_A 295 CNN--------------------------------------------------YKNKMMVCQVGGIEALVRTVLRAGDRE 324 (529)
3033 T ss_dssp TTC--------------------------------------------------HHHHHHHHHTTHHHHHHHHHHHHTTCH
3034 T ss_pred cCC--------------------------------------------------HHHHHHHHHcCHHHHHHHHHHhcCCCh
3035 Confidence 110 0001112345667777776641 2456
3036
3037
3038 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEV 640 (747)
3039 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~L 640 (747)
3040 .++..++.+|.+++..... .......+...++++.+..++.+. ++.++..++.+|.+++..... ..+...++++.+
3041 T Consensus 325 ~~~~~a~~~l~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l 402 (529)
3042 T 1JDH_A 325 DITEPAICALRHLTSRHQE--AEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 402 (529)
3043 T ss_dssp HHHHHHHHHHHHHTSSSTT--HHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHH
3044 T ss_pred HhHHHHHHHHHHHhcCccc--HHHHHHHHHhcccHHHHHHHHCCCCCHHHHHHHHHHHHHHhcChhhhHHHHhcCHHHHH
3045 Confidence 7788899999998865331 000012222456788888888765 678899999999999876433 334455677888
3046
3047
3048 Q NP_000290.2 641 TRLLTSHTGNTSNS--------------------EDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
3049 Q Consensus 641 l~LL~s~s~~~~~d--------------------~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
3050 ..++.... .+ +.++..++.+|.+++.. ......+...++++.++.++.+. ++.+
3051 T Consensus 403 ~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~~ 476 (529)
3052 T 1JDH_A 403 VQLLVRAH----QDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARD-VHNRIVIRGLNTIPLFVQLLYSP-IENI 476 (529)
3053 T ss_dssp HHHHHHHH----HHHC-----------CBTTBCHHHHHHHHHHHHHHHTTS-HHHHHHHHHTTCHHHHHHGGGCS-CHHH
3054 T ss_pred HHHHHhcC----hhHHHHHhccCcchhHhccCCHHHHHHHHHHHHHHHhcC-ccchHHHHhcCcHHHHHHHhcCC-CHHH
3055 Confidence 88876520 01 67888999999999875 34444455556788888888876 7889
3056
3057
3058 Q NP_000290.2 701 AEAARLLLSDMWSSKELQGVLRQQGF 726 (747)
3059 Q Consensus 701 r~aAL~aLsnL~~~~~~~~~~~~~~~ 726 (747)
3060 +..++.+|.+++...+....+...|+
3061 T Consensus 477 ~~~a~~~l~~l~~~~~~~~~~~~~~~ 502 (529)
3062 T 1JDH_A 477 QRVAAGVLCELAQDKEAAEAIEAEGA 502 (529)
3063 T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHTTC
3064 T ss_pred HHHHHHHHHHHhcCHHHHHHHHHcCc
3065 Confidence 99999999999987765544444443
3066
3067
3068 No 19
3069 >3IFQ_A plakoglobin, E-cadherin; armadillo repeat, Cardiomyopathy, Cell adhesion; HET: SO4; 2.8A {Homo sapiens}
3070 Probab=98.42 E-value=4.5e-11 Score=124.53 Aligned_cols=381 Identities=19% Similarity=0.234 Sum_probs=227.1 Template_Neff=13.100
3071
3072 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
3073 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
3074 +++.+...+.+.+..++..++.++..++.........+...++++.+...+.+.++.++..++.++..++.........+
3075 T Consensus 104 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 183 (553)
3076 T 3IFQ_A 104 GIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLII 183 (553)
3077 T ss_dssp HHHHHHHGGGCCCHHHHHHHHHHHHHHHHHCTTHHHHHHHTTGGGGTGGGGGSSCHHHHHHHHHHHHHHHTTCHHHHHHH
3078 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHhcCChHHHHHHHhcCHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHH
3079 Confidence 45556666666677888889999988876543333333335677788888877778888999999998876444333333
3080
3081
3082 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
3083 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
3084 ...++++.+...+....+..++..++.++..+.........+.. ++++.+..++... ++++..
3085 T Consensus 184 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~~ 247 (553)
3086 T 3IFQ_A 184 LANGGPQALVQIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTSN----------------SPRLVQ 247 (553)
3087 T ss_dssp HHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHGGGGSS----------------CHHHHH
3088 T ss_pred HHCCHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCCcchHHHHHHCchHHHHHHHHhcC----------------CHHHHH
3089 Confidence 34456777777776333567888888888888775444333443 6667777666531 233333
3090
3091
3092 Q NP_000290.2 405 NATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSY 484 (747)
3093 Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (747)
3094 .+..++..-.. ...... ...++++.+...++. .+..-...+...|.++..
3095 T Consensus 248 ~a~~~l~~l~~---------------------~~~~~~---~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~ 297 (553)
3096 T 3IFQ_A 248 NCLWTLRNLSD---------------------VATKQE---GLESVLKILVNQLSV------DDVNVLTCATGTLSNLTC 297 (553)
3097 T ss_dssp HHHHHHHHHHT---------------------TCTTCS---CCHHHHHHHHTTTTC------CCHHHHHHHHHHHHHHTT
3098 T ss_pred HHHHHHHHhCC---------------------hhHHHH---HHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHHHc
3099 Confidence 33333322110 000011 112344444433321 111222233333333321
3100
3101
3102 Q NP_000290.2 485 RLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK-SKKDA 563 (747)
3103 Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s-s~d~e 563 (747)
3104 ... .....+.+.++++.++..+.. ..++.
3105 T Consensus 298 ~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~~~~~~~~ 327 (553)
3106 T 3IFQ_A 298 NNS--------------------------------------------------KNKTLVTQNSGVEALIHAILRAGDKDD 327 (553)
3107 T ss_dssp TCH--------------------------------------------------HHHHHHTTTTHHHHHHHHHHHHTTCHH
3108 T ss_pred CCH--------------------------------------------------HHHHHHHHccHHHHHHHHHHHcCCChH
3109 Confidence 100 001122345677777776652 14566
3110
3111
3112 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN-SDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVT 641 (747)
3113 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d-~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll 641 (747)
3114 ++..++.+|.+++..... ... ....+...++++.+..++.+.+ +.++..++.+|.+++..... ......++++.+.
3115 T Consensus 328 ~~~~a~~~l~~l~~~~~~-~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~ 405 (553)
3116 T 3IFQ_A 328 ITEPAVCALRHLTSRHPE-AEM-AQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLV 405 (553)
3117 T ss_dssp HHHHHHHHHHHHTSSSTT-HHH-HHHHHHTTTHHHHHHHGGGCTTCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHH
3118 T ss_pred hHHHHHHHHHHHhcCCCh-HHH-HHHHHHHcchHHHHHHHHcCCCChHHHHHHHHHHHHHhcCcccHHHHHHccHHHHHH
3119 Confidence 788889999998865321 000 0112234567888888887654 78889999999999876433 2334456778888
3120
3121
3122 Q NP_000290.2 642 RLLTSHTGN---------------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
3123 Q Consensus 642 ~LL~s~s~~---------------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
3124 .++...... ......++..++.+|.+++.. +.....+...++++.++.++.+. ++.++..++.
3125 T Consensus 406 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~ 483 (553)
3126 T 3IFQ_A 406 QLLVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGALHILARD-PMNRMEIFRLNTIPLFVQLLYSS-VENIQRVAAG 483 (553)
3127 T ss_dssp HHHHHHHHHHHHHHHTTCCCTTCSSCCHHHHHHHHHHHHHHHTTS-HHHHHHHHHTTCHHHHHHHTTCS-CHHHHHHHHH
3128 T ss_pred HHHHHcCcchhHHHhhcccCccccCCCHHHHHHHHHHHHHHHhcC-hhhHHHHHHcCChHHHHHHHhCC-CHHHHHHHHH
3129 Confidence 877652100 000027788899999999874 44445555667888888888866 7889999999
3130
3131
3132 Q NP_000290.2 707 LLSDMWSSKELQGVLRQQGF 726 (747)
3133 Q Consensus 707 aLsnL~~~~~~~~~~~~~~~ 726 (747)
3134 +|.+++...+....+.+.|.
3135 T Consensus 484 ~l~~l~~~~~~~~~~~~~~~ 503 (553)
3136 T 3IFQ_A 484 VLCELAQDKEAADAIDAEGA 503 (553)
3137 T ss_dssp HHHHHTTSHHHHHHHHHTTT
3138 T ss_pred HHHHHHcCHHHHHHHHHCCc
3139 Confidence 99999987766555554443
3140
3141
3142 No 20
3143 >4UAD_A Importin alpha import adaptor, Influenza; importin karyopherin complex NLS, PROTEIN; 2.42A {Homo sapiens}
3144 Probab=98.39 E-value=6e-11 Score=121.78 Aligned_cols=372 Identities=17% Similarity=0.175 Sum_probs=218.3 Template_Neff=12.900
3145
3146 Q NP_000290.2 246 TIPKAVQYLSS-QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3147 Q Consensus 246 iL~~Ll~lL~s-sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3148 +++.+...+.+ .++.++..++.++..++.........+...++++.+..++.+.+..++..++.++..++.........
3149 T Consensus 68 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 147 (479)
3150 T 4UAD_A 68 VVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDY 147 (479)
3151 T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHTSCHHHHHH
3152 T ss_pred hHHHHHHHhhcCCCHHHHHHHHHHHHHHhCCCchHHHHHHHcCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHH
3153 Confidence 45556666654 56778888899998887654333333333567777888887777888899999999887654433333
3154
3155
3156 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI-A-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
3157 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lv-e-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
3158 +...+++..+...+....++.++..++.++..++.......... . ++++.++.++... ++++
3159 T Consensus 148 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~ 211 (479)
3160 T 4UAD_A 148 VLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSS----------------DSDL 211 (479)
3161 T ss_dssp HHHTTCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCSSCCCGGGTGGGHHHHHHHTTCC----------------CHHH
3162 T ss_pred HHhCCcHHHHHHHhhcCCchHHHHHHHHHHHHHHcCCCCCchhhcccchHHHHHHHhcCC----------------CHHH
3163 Confidence 33345666677766533456788888888888876542222222 1 5666666666431 2333
3164
3165
3166 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
3167 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
3168 -..+..++..-... .+ ...+.+ .-.+.+..|...++. .+..-...+...|.++
3169 T Consensus 212 ~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l 264 (479)
3170 T 4UAD_A 212 LADACWALSYLSDG------PN--------------EKIQAV-IDSGVCRRLVELLMH------NDYKVASPALRAVGNI 264 (479)
3171 T ss_dssp HHHHHHHHHHHTSS------SH--------------HHHHHH-HHTTCHHHHHHGGGC------SCHHHHHHHHHHHHHH
3172 T ss_pred HHHHHHHHHHHhcC------ch--------------HHHHHH-HhCCHHHHHHHHhcC------CCHHhHHHHHHHHHHH
3173 Confidence 33333333221100 00 000000 012333333333221 0111111222222222
3174
3175
3176 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
3177 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
3178 .... ......+.+.++++.|+.++. +.++
3179 T Consensus 265 ~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~ 293 (479)
3180 T 4UAD_A 265 VTGD--------------------------------------------------DIQTQVILNCSALPCLLHLLS-SPKE 293 (479)
3181 T ss_dssp TTSC--------------------------------------------------HHHHHHHHTTTCHHHHHHHTT-CSSH
3182 T ss_pred hcCC--------------------------------------------------HHHHHHHHhcChHHHHHHHhh-CCCH
3183 Confidence 2100 000112234567888888887 4677
3184
3185
3186 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGNQVFPE 639 (747)
3187 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~giI~~ 639 (747)
3188 .++..++.+|.+++...+. ....+.+.++++.|..++.+.++.++..++.+|.+++.. ... ..+...++++.
3189 T Consensus 294 ~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~ 368 (479)
3190 T 4UAD_A 294 SIRKEACWTISNITAGNRA-----QIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKP 368 (479)
3191 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHH
3192 T ss_pred HHHHHHHHHHHHHHcCCHH-----HHHHHHHCCHHHHHHHHHhccCHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCcHHH
3193 Confidence 8888999999999865332 223334557888999999888889999999999999874 222 23344567788
3194
3195
3196 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQ-----------YFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
3197 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~-----------Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
3198 +..++.+ .++.++..++.+|.+++...+..... +.+.+.++.+..++.+. ++.++..++.+|
3199 T Consensus 369 l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~~v~~~a~~~l 441 (479)
3200 T 4UAD_A 369 LCDLLTV------MDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHE-NQEIYQKAFDLI 441 (479)
3201 T ss_dssp HHGGGGC------SCHHHHHHHHHHHHHHHHHHHHHTTTTSCCCCTTHHHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHH
3202 T ss_pred HHHHhhc------CCHHHHHHHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHhchHHHHHHHHhCC-cHHHHHHHHHHH
3203 Confidence 8888776 36788889999999998753322111 34445677888888766 788999999999
3204
3205
3206 Q NP_000290.2 709 SDMWSSKELQGVLRQ 723 (747)
3207 Q Consensus 709 snL~~~~~~~~~~~~ 723 (747)
3208 .+++...+....+.+
3209 T Consensus 442 ~~l~~~~~~~~~~~~ 456 (479)
3210 T 4UAD_A 442 EHYFGVEDDDSSLAP 456 (479)
3211 T ss_dssp HHHSCC---------
3212 T ss_pred HHhhCCCCCchhccc
3213 Confidence 999977665554443
3214
3215
3216 No 21
3217 >5ZHX_D Rap1 GTPase-GDP dissociation stimulator 1; armadillo GEF chaperone, ONCOPROTEIN; HET: FAR; 3.5A {Homo sapiens}
3218 Probab=98.39 E-value=6.3e-11 Score=120.93 Aligned_cols=407 Identities=17% Similarity=0.217 Sum_probs=228.2 Template_Neff=13.200
3219
3220 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP--NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
3221 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~--d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
3222 +++.+...+.+.++.++..++.++..++...+.....+...++++.+..++... ++.++..++.++..++.... ...
3223 T Consensus 19 ~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~v~~~a~~~l~~l~~~~~-~~~ 97 (487)
3224 T 5ZHX_D 19 LISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELES-SKE 97 (487)
3225 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHTTSTTCHHHHHHHHHTTCHHHHHHHHHHTSSCSHHHHHHHHHHHHHTTSSH-HHH
3226 T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHHcccCCCHHHHHHHHHHHHHHHcchh-HHH
3227 Confidence 556677777777888999999999998875544444444556778888888765 77888899999998876532 222
3228
3229
3230 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
3231 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
3232 .+...++++.+...+....++.++..++.++..++........+.. ++++.|..++....... .....+.
3233 T Consensus 98 ~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---------~~~~~~~ 168 (487)
3234 T 5ZHX_D 98 QFASTNIAEELVKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSD---------KEDDITE 168 (487)
3235 T ss_dssp HHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTSHHHHHHHHHHTHHHHHHHHHHHTSSCC---------CHHHHHH
3236 T ss_pred HHhhCCHHHHHHHHHHhccChHHHHHHHHHHHHHhcCHHHHHHHHHCCHHHHHHHHHHhcCCCC---------CHHHHHH
3237 Confidence 3334467777888776222677888899999998876444444444 67777777776432100 0000000
3238
3239
3240 Q NP_000290.2 403 FFNATGCLR----------KRL------GMRELLALVPQ-------RATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQ 459 (747)
3241 Q Consensus 403 ~~~~~~~~~----------~~~------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (747)
3242 +..+...+. +-+ -+..++.+... .+...-.+++..+..+..+.. .+.++.+...+.
3243 T Consensus 169 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~ 247 (487)
3244 T 5ZHX_D 169 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVD-NGIVEKLMDLLD 247 (487)
3245 T ss_dssp HHHHHHHHHHHTTSHHHHHHHSSSSSSSHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSHHHHHHHHT-TTHHHHHHHHHH
3246 T ss_pred HHHHHHHHHHHHhccHHHHHHhhCCCchHHHHHHHHccCCCHHHHHHHHHHHHHHHcCchHHHHHHh-cCHHHHHHHHHH
3247 Confidence 000000000 000 00111111100 000000011111111111000 011222211111
3248
3249
3250 Q NP_000290.2 460 NCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKG 539 (747)
3251 Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~ 539 (747)
3252 .... .-+..-...+..+|.|+. .. . ..
3253 T Consensus 248 ~~~~--~~~~~~~~~a~~~l~~l~-----------------------------------~~---------------~-~~ 274 (487)
3254 T 5ZHX_D 248 RHVE--DGNVTVQHAALSALRNLA-----------------------------------IP---------------V-IN 274 (487)
3255 T ss_dssp HTSS--SSCHHHHHHHHHHHHHHT-----------------------------------CS---------------H-HH
3256 T ss_pred hccc--CCCHHHHHHHHHHHHHhc-----------------------------------CC---------------h-hh
3257 Confidence 0000 000000111111111111 00 0 01
3258
3259
3260 Q NP_000290.2 540 SGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS-DVVRSGASL 618 (747)
3261 Q Consensus 540 ~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~-eVr~~AL~a 618 (747)
3262 ...+.+.++++.++.++. +.++.++..++++|.+++...+. . ........++++.++.++.+.+. .++..++++
3263 T Consensus 275 ~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~---~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~ 349 (487)
3264 T 5ZHX_D 275 KAKMLSAGVTEAVLKFLK-SEMPPVQFKLLGTLRMLIDAQAE---A-AEQLGKNVKLVERLVEWCEAKDHAGVMGESNRL 349 (487)
3265 T ss_dssp HHHHHHHTHHHHHHTTSS-CCCHHHHHHHHHHHHHHTSSCHH---H-HHHHHHCHHHHHHHHHHHTCCSCCHHHHHHHHH
3266 T ss_pred HHHHHHcChHHHHHHHHh-CCCHHHHHHHHHHHHHHHhhcHH---H-HHHhccccCHHHHHHHHHHhcCchhhHHHHHHH
3267 Confidence 122345678888888888 46788888999999999875332 1 11221224678888888887665 888999999
3268
3269
3270 Q NP_000290.2 619 LSNMSRHPL---L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCR 693 (747)
3271 Q Consensus 619 LsnLa~~~e---~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~ 693 (747)
3272 |.+++.... . ..+...++++.+..++.. .++.++..++.+|.+++...+ .....+.+.++++.++.++.
3273 T Consensus 350 l~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 423 (487)
3274 T 5ZHX_D 350 LSALIRHSKSKDVIKTIVQSGGIKHLVTMATS------EHVIMQNEALVALALIAALELGTAEKDLESAKLVQILHRLLA 423 (487)
3275 T ss_dssp HHHHHHHHCCHHHHHHHHHHTCHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHTS
3276 T ss_pred HHHHHHHhcchhHHHHHHHcchHHHHHHHhcC------CCHHHHHHHHHHHHHHHHcCCCchHHHHhhhhHHHHHHHHHh
3277 Confidence 999986522 2 233445677888888776 367889999999999987542 23333444457888888887
3278
3279
3280 Q NP_000290.2 694 SS-ASPKAAEAARLLLSDMWSSKELQGVLRQQGFD 727 (747)
3281 Q Consensus 694 s~-~d~eVr~aAL~aLsnL~~~~~~~~~~~~~~~~ 727 (747)
3282 .. .++.++..++.+|.+++...+....+...|+-
3283 T Consensus 424 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 458 (487)
3284 T 5ZHX_D 424 DERSAPEIKYNSMVLICALMGSECLHKEVQDLAFL 458 (487)
3285 T ss_dssp SSCCSTTCTHHHHHHHHTSCSSSCCSTTTTTHHHH
3286 T ss_pred cccCcHHHHHHHHHHHHHHhCcHHHHHHHHHhchH
3287 Confidence 32 15788999999999999887766666555543
3288
3289
3290 No 22
3291 >1EE4_A KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
3292 Probab=98.36 E-value=8.2e-11 Score=117.69 Aligned_cols=364 Identities=16% Similarity=0.224 Sum_probs=221.8 Template_Neff=13.200
3293
3294 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3295 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3296 ++.+...+.+.++.++..++..+..++..... ....+...++++.+...+...+ +.++..++.++..++.........
3297 T Consensus 3 ~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 82 (423)
3298 T 1EE4_A 3 LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKV 82 (423)
3299 T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHHCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHH
3300 T ss_pred hHHHHHHhccccHHHHHHHHHHHHHHHhCCCCCchHHHHhcChHHHHHHHhhcCCcHHHHHHHHHHHHHHhCCCHHHHHH
3301 Confidence 44566666777788888888888888754321 2222333456777777776543 667888899998887644333333
3302
3303
3304 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
3305 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
3306 +...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|..++... ++++
3307 T Consensus 83 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~ 145 (423)
3308 T 1EE4_A 83 VVDADAVPLFIQLLY-TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN----------------KPSL 145 (423)
3309 T ss_dssp HHHTTHHHHHHHHHH-HSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSC----------------CHHH
3310 T ss_pred HHhCChHHHHHHHHh-CCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhcC----------------CHHH
3311 Confidence 333456777777776 5677888899999998886532 2223333 6667776666421 2344
3312
3313
3314 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
3315 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
3316 -..+..++..-... ...........+++..|...+.. .+......+...|.++
3317 T Consensus 146 ~~~a~~~l~~l~~~---------------------~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l 198 (423)
3318 T 1EE4_A 146 IRTATWTLSNLCRG---------------------KKPQPDWSVVSQALPTLAKLIYS------MDTETLVDACWAISYL 198 (423)
3319 T ss_dssp HHHHHHHHHHHHCC---------------------STTCCCHHHHGGGHHHHHHHTTC------SCHHHHHHHHHHHHHH
3320 T ss_pred HHHHHHHHHHHHcC---------------------CCCCCChHHHhhHHHHHHHHHHc------CCHHHHHHHHHHHHHH
3321 Confidence 44444443321100 00000111122334433333221 1111112222222222
3322
3323
3324 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
3325 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
3326 ... +......+.+.++++.+..++. +.++
3327 T Consensus 199 ~~~--------------------------------------------------~~~~~~~~~~~~~~~~l~~~l~-~~~~ 227 (423)
3328 T 1EE4_A 199 SDG--------------------------------------------------PQEAIQAVIDVRIPKRLVELLS-HEST 227 (423)
3329 T ss_dssp TSS--------------------------------------------------CHHHHHHHHHTTHHHHHHHHTT-CSCH
3330 T ss_pred hcC--------------------------------------------------CHHHHHHHHhcCHHHHHHHHhc-CCCc
3331 Confidence 110 0001112234567778888887 4677
3332
3333
3334 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEV 640 (747)
3335 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~L 640 (747)
3336 .++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. +.. ..+...++++.+
3337 T Consensus 228 ~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l 302 (423)
3338 T 1EE4_A 228 LVQTPALRAVGNIVTGNDL-----QTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPL 302 (423)
3339 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHH
3340 T ss_pred chhHHHHHHHHHHHhCChH-----HHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHH
3341 Confidence 8888999999998865332 122333457888888888888888999999999999875 222 334455677888
3342
3343
3344 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQ---PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKEL 717 (747)
3345 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s---~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
3346 ..++.+ .++.++..++.+|.+++... +.....+.+.++++.+..++.+. ++.++..++.+|.+++...+.
3347 T Consensus 303 ~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~a~~~l~~l~~~~~~ 375 (423)
3348 T 1EE4_A 303 VKLLEV------AEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIA-DNRIIEVTLDALENILKMGEA 375 (423)
3349 T ss_dssp HHHHHH------SCHHHHHHHHHHHHHHHGGGGTCHHHHHHHHHTTCHHHHHHGGGSS-CHHHHHHHHHHHHHHHHHHHH
3350 T ss_pred HHHHhc------CCHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHCCCHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHH
3351 Confidence 888766 36788999999999998753 23334444456788888888876 788999999999999876554
3352
3353
3354 No 23
3355 >1EE4_B KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
3356 Probab=98.36 E-value=8.2e-11 Score=117.69 Aligned_cols=364 Identities=16% Similarity=0.224 Sum_probs=221.8 Template_Neff=13.200
3357
3358 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3359 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3360 ++.+...+.+.++.++..++..+..++..... ....+...++++.+...+...+ +.++..++.++..++.........
3361 T Consensus 3 ~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 82 (423)
3362 T 1EE4_B 3 LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKV 82 (423)
3363 T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHCCSSSCCHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHH
3364 T ss_pred hHHHHHHhccccHHHHHHHHHHHHHHHhCCCCCchHHHHhcChHHHHHHHhhcCCcHHHHHHHHHHHHHHhCCCHHHHHH
3365 Confidence 44566666777788888888888888754321 2222333456777777776543 667888899998887644333333
3366
3367
3368 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
3369 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
3370 +...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|..++... ++++
3371 T Consensus 83 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~ 145 (423)
3372 T 1EE4_B 83 VVDADAVPLFIQLLY-TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN----------------KPSL 145 (423)
3373 T ss_dssp HHHTTHHHHHHHHHH-HSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSC----------------CHHH
3374 T ss_pred HHhCChHHHHHHHHh-CCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhcC----------------CHHH
3375 Confidence 333456777777776 5677888899999998886532 2223333 6667776666421 2344
3376
3377
3378 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
3379 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
3380 -..+..++..-... ...........+++..|...+.. .+......+...|.++
3381 T Consensus 146 ~~~a~~~l~~l~~~---------------------~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l 198 (423)
3382 T 1EE4_B 146 IRTATWTLSNLCRG---------------------KKPQPDWSVVSQALPTLAKLIYS------MDTETLVDACWAISYL 198 (423)
3383 T ss_dssp HHHHHHHHHHHHCC---------------------SSSCCCHHHHGGGHHHHHHHTTC------SCHHHHHHHHHHHHHH
3384 T ss_pred HHHHHHHHHHHHcC---------------------CCCCCChHHHhhHHHHHHHHHHc------CCHHHHHHHHHHHHHH
3385 Confidence 44444443321100 00000111122334433333221 1111112222222222
3386
3387
3388 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
3389 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
3390 ... +......+.+.++++.+..++. +.++
3391 T Consensus 199 ~~~--------------------------------------------------~~~~~~~~~~~~~~~~l~~~l~-~~~~ 227 (423)
3392 T 1EE4_B 199 SDG--------------------------------------------------PQEAIQAVIDVRIPKRLVELLS-HEST 227 (423)
3393 T ss_dssp HSS--------------------------------------------------CHHHHHHHHHTTHHHHHHHHTT-CSCH
3394 T ss_pred hcC--------------------------------------------------CHHHHHHHHhcCHHHHHHHHhc-CCCc
3395 Confidence 110 0001112234567778888887 4677
3396
3397
3398 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEV 640 (747)
3399 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~L 640 (747)
3400 .++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. +.. ..+...++++.+
3401 T Consensus 228 ~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l 302 (423)
3402 T 1EE4_B 228 LVQTPALRAVGNIVTGNDL-----QTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPL 302 (423)
3403 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHH
3404 T ss_pred chhHHHHHHHHHHHhCChH-----HHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHH
3405 Confidence 8888999999998865332 122333457888888888888888999999999999875 222 334455677888
3406
3407
3408 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQ---PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKEL 717 (747)
3409 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s---~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
3410 ..++.+ .++.++..++.+|.+++... +.....+.+.++++.+..++.+. ++.++..++.+|.+++...+.
3411 T Consensus 303 ~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~a~~~l~~l~~~~~~ 375 (423)
3412 T 1EE4_B 303 VKLLEV------AEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIA-DNRIIEVTLDALENILKMGEA 375 (423)
3413 T ss_dssp HHHHHH------SCHHHHHHHHHHHHHHHGGGGTCTHHHHHHHHTTCHHHHHHGGGSS-CHHHHHHHHHHHHHHHHHHHH
3414 T ss_pred HHHHhc------CCHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHCCCHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHH
3415 Confidence 888766 36788999999999998753 23334444456788888888876 788999999999999876554
3416
3417
3418 No 24
3419 >4EV8_A Catenin beta-1; mouse catenin, CELL ADHESION; HET: URE; 1.9A {Mus musculus}
3420 Probab=98.34 E-value=9.8e-11 Score=121.45 Aligned_cols=382 Identities=19% Similarity=0.227 Sum_probs=226.5 Template_Neff=13.100
3421
3422 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
3423 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
3424 +++.+...+.+.++.++..++.++..++.........+...++++.+...+.+.+..++..++.++..++.........+
3425 T Consensus 103 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 182 (538)
3426 T 4EV8_A 103 GIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLII 182 (538)
3427 T ss_pred cHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
3428 Confidence 45556666666677888889999988876543333333345677788888877778888999999998886444333334
3429
3430
3431 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
3432 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
3433 ...++++.+...+....+..++..++.++..+.........+.. ++++.+..++... ++++..
3434 T Consensus 183 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~~ 246 (538)
3435 T 4EV8_A 183 LASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP----------------SQRLVQ 246 (538)
3436 T ss_pred HHCChHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhcCC----------------CHHHHH
3437 Confidence 44457777777776333567788888888888765444333433 6667777666432 233333
3438
3439
3440 Q NP_000290.2 405 NATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSY 484 (747)
3441 Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (747)
3442 .+..++..-.. .......+ .+.+..+...+.. .+..-...+...|.++..
3443 T Consensus 247 ~a~~~l~~l~~---------------------~~~~~~~~---~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~ 296 (538)
3444 T 4EV8_A 247 NCLWTLRNLSD---------------------AATKQEGM---EGLLGTLVQLLGS------DDINVVTCAAGILSNLTC 296 (538)
3445 T ss_pred HHHHHHHHHHc---------------------CCCchHHH---cCcHHHHHHHhcC------CCHHHHHHHHHHHHHHHc
3446 Confidence 33333322110 00000001 2333333333321 111112222222333221
3447
3448
3449 Q NP_000290.2 485 RLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK-SKKDA 563 (747)
3450 Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s-s~d~e 563 (747)
3451 .- ......+.+.++++.++..+.. ..++.
3452 T Consensus 297 ~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 326 (538)
3453 T 4EV8_A 297 NN--------------------------------------------------YKNKMMVCQVGGIEALVRTVLRAGDRED 326 (538)
3454 T ss_pred CC--------------------------------------------------HHHHHHHHHCCcHHHHHHHHhcCCCCHH
3455 Confidence 00 0011122455677777776652 14566
3456
3457
3458 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVT 641 (747)
3459 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll 641 (747)
3460 ++..++.+|.+++..... .......+...++++.|..++.+. +..++..++.+|.+++..... ..+...++++.+.
3461 T Consensus 327 ~~~~a~~~l~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~ 404 (538)
3462 T 4EV8_A 327 ITEPAICALRHLTSRHQE--AEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLV 404 (538)
3463 T ss_pred HHHHHHHHHHHHHcCCCC--hHHHHHHHHHCCHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHCChHHHHH
3464 Confidence 778899999998865331 000012223457788888888765 678889999999999876433 3344556778888
3465
3466
3467 Q NP_000290.2 642 RLLTSHTGNT----------------SNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
3468 Q Consensus 642 ~LL~s~s~~~----------------~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
3469 .++....... ...+.++..++.+|.+++.. ......+...++++.++.++.+. ++.++..++
3470 T Consensus 405 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~a~ 482 (538)
3471 T 4EV8_A 405 QLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARD-VHNRIVIRGLNTIPLFVQLLYSP-IENIQRVAA 482 (538)
3472 T ss_pred HHHcCCCcchhhhhccCchHHHHHhcCCCHHHHHHHHHHHHHHhCC-cchhHHHHHcChHHHHHHHhcCC-CHHHHHHHH
3473 Confidence 7776521000 00156677899999999875 33344445556788888888876 788999999
3474
3475
3476 Q NP_000290.2 706 LLLSDMWSSKELQGVLRQQGFD 727 (747)
3477 Q Consensus 706 ~aLsnL~~~~~~~~~~~~~~~~ 727 (747)
3478 .+|.+++...+....+.+.|+-
3479 T Consensus 483 ~~l~~l~~~~~~~~~~~~~~~~ 504 (538)
3480 T 4EV8_A 483 GVLCELAQDKEAAEAIEAEGAT 504 (538)
3481 T ss_pred HHHHHHHcCHHHHHHHHHCCcH
3482 Confidence 9999999877665555544443
3483
3484
3485 No 25
3486 >4RXH_B Importin subunit alpha, Large T; ARM repeat, NLS, nuclear import; 1.7553A {Neurospora crassa}
3487 Probab=98.34 E-value=1.1e-10 Score=121.65 Aligned_cols=365 Identities=17% Similarity=0.175 Sum_probs=215.9 Template_Neff=12.500
3488
3489 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
3490 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
3491 +++.+...+.+.++.++..++.++..++.........+...++++.+...+.+.++.++..++.++..++..........
3492 T Consensus 72 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 151 (495)
3493 T 4RXH_B 72 VVGRFVEFLRSPHTLVQFEAAWALTNIASGSATQTQVVIEAGAVPIFVELLGSPEPDVREQAVWALGNIAGDSPQCRDYV 151 (495)
3494 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHH
3495 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChHHHHHHHhCChHHHHHHHhcCCCHHHHHHHHHHHHHHHCCCHHHHHHH
3496 Confidence 45566666666777888889999988876543333333345677788888887778889999999998886533333333
3497
3498
3499 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEE-LIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
3500 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~-Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
3501 ...++++.+...+....++.++..++.++..++........ ... ++++.+..++..+ ++++-
3502 T Consensus 152 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v~ 215 (495)
3503 T 4RXH_B 152 LSCGALRPLLTLLGDSRKLSMLRNATWTLSNFCRGKTPQPDWNTIAPALPVLAKLVYSL----------------DDEVL 215 (495)
3504 T ss_dssp HHTTCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCTTCCCHHHHTTHHHHHHHHTTCS----------------SHHHH
3505 T ss_pred HhCCcHHHHHHHhccccCHHHHHHHHHHHHHHhCCCCCCCcHHhhcCHHHHHHHHhhCC----------------CHHHH
3506 Confidence 33456777777775333567888889999988875422211 112 5666666666431 23333
3507
3508
3509 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
3510 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
3511 ..+..++..-. .........---.+++..|...++. .+..-...+...|.++.
3512 T Consensus 216 ~~a~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 268 (495)
3513 T 4RXH_B 216 IDACWAISYLS---------------------DGSNDKIQAVIEAGIPRRLVELLMH------ASTSVQTPALRSVGNIV 268 (495)
3514 T ss_dssp HHHHHHHHHHT---------------------SSCHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHT
3515 T ss_pred HHHHHHHHHHh---------------------cCCHHHHHHHHHCChHHHHHHHHhc------CCccHHHHHHHHHHHHh
3516 Confidence 33333332110 0000000000011344444443321 01111122222222222
3517
3518
3519 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
3520 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
3521 ..- ......+.+.++++.++.++. +.++.
3522 T Consensus 269 ~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~~ 297 (495)
3523 T 4RXH_B 269 TGD--------------------------------------------------DVQTQVIINCGALPCLLSLLS-SNKDG 297 (495)
3524 T ss_dssp TSC--------------------------------------------------HHHHHHHHHTTHHHHHHHHTT-CSCHH
3525 T ss_pred cCC--------------------------------------------------HHHHHHHHhCCHHHHHHHHHh-CCCHH
3526 Confidence 100 001112234567778888887 46778
3527
3528
3529 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP----LL-HRVMGNQVFP 638 (747)
3530 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~----e~-~~ll~~giI~ 638 (747)
3531 ++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++... .. ..+...++++
3532 T Consensus 298 v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 372 (495)
3533 T 4RXH_B 298 IRKEACWTISNITAGNSA-----QIQSVIDANIIPPLIHLLSHADLKTRKEACWAISNATSGGLQKPDQIRYLVAQGCIK 372 (495)
3534 T ss_dssp HHHHHHHHHHHHHTSCHH-----HHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHTTTTTTTCTHHHHHHHHTTCHH
3535 T ss_pred HHHHHHHHHHHHHcCCHH-----HHHHHHHCCcHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHCCCHH
3536 Confidence 888899999998764332 1223344578888888888778888889999999988752 11 2233446777
3537
3538
3539 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL--------------AKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
3540 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~--------------~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
3541 .+..++.+ .++.++..++.+|.+++...... ...+.+.++++.|..++.+. ++.++..+
3542 T Consensus 373 ~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a 445 (495)
3543 T 4RXH_B 373 PLCDLLAC------PDNKIIQVALDGLENILKVGELDKNAAGDGPDSINRYALFIEECGGMEKIHDCQTNA-NEEIYMKA 445 (495)
3544 T ss_dssp HHHHGGGC------SCHHHHHHHHHHHHHHHHHHHHHHHTC-----CCCHHHHHHHHTTHHHHHHHGGGCC-SSTTHHHH
3545 T ss_pred HHHHHhhC------CCHHHHHHHHHHHHHHHHHhhHccccCCCCCchHHHHHHHHHHccchHHHHHhhhcC-CHHHHHHH
3546 Confidence 77777766 36778888999999888753211 22333455677788888766 78899999
3547
3548
3549 Q NP_000290.2 705 RLLLSDMWSSKE 716 (747)
3550 Q Consensus 705 L~aLsnL~~~~~ 716 (747)
3551 +.+|.+++...+
3552 T Consensus 446 ~~~l~~l~~~~~ 457 (495)
3553 T 4RXH_B 446 YNIIEKYFSDED 457 (495)
3554 T ss_dssp HHHHHHHCC---
3555 T ss_pred HHHHHHhcCccc
3556 Confidence 999999886544
3557
3558
3559 No 26
3560 >4BQK_A IMPORTIN SUBUNIT ALPHA-1A, T-DNA BORDER; TRANSPORT PROTEIN, HYDROLASE, NUCLEAR LOCALIZATION; HET: PEG; 1.997A {ORYZA SATIVA}
3561 Probab=98.32 E-value=1.2e-10 Score=118.46 Aligned_cols=366 Identities=17% Similarity=0.164 Sum_probs=217.0 Template_Neff=13.000
3562
3563 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3564 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3565 +++.+...+.+.+ +.++..++.++..++.........+...++++.+..++.+.+..++..++.++..++.........
3566 T Consensus 46 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 125 (456)
3567 T 4BQK_A 46 VVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDL 125 (456)
3568 T ss_dssp CHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHH
3569 T ss_pred cHHHHHHHhccCcCHHHHHHHHHHHHHHhcCCHhHHHHHHhccHHHHHHHHhcCCCHHHHHHHHHHHHHHHCCCHHHHHH
3570 Confidence 4455566665543 778888899998887554443333444567778888887777888899999999887653333333
3571
3572
3573 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
3574 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
3575 +...+.+..++..+....++.++..++.++..++........... ++++.|..++... ++++-
3576 T Consensus 126 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~ 189 (456)
3577 T 4BQK_A 126 VLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSN----------------DEEVL 189 (456)
3578 T ss_dssp HHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCC----------------CHHHH
3579 T ss_pred HHHCCcHHHHHHHHhhCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhcCC----------------CHHHH
3580 Confidence 333455666666665334567888888888888775433222222 5666666666431 23333
3581
3582
3583 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
3584 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
3585 ..+..++..-.. ..+ ..++.. .-.+++..|...+.. .+..-...+...|.++.
3586 T Consensus 190 ~~a~~~l~~l~~------~~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 242 (456)
3587 T 4BQK_A 190 TDACWALSYLSD------GTN--------------DKIQAV-IEAGVCPRLVELLLH------PSPSVLIPALRTVGNIV 242 (456)
3588 T ss_dssp HHHHHHHHHHTS------SSH--------------HHHHHH-HHTTCHHHHHHHTTC------SCHHHHHHHHHHHHHHT
3589 T ss_pred HHHHHHHHHHhc------CCh--------------HHHHHH-HHCChHHHHHHHHhC------CCHHHHHHHHHHHHHHH
3590 Confidence 333333322110 000 000000 012334444333321 11111222222222222
3591
3592
3593 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
3594 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
3595 ..- ......+.+.++++.++.++....++.
3596 T Consensus 243 ~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~~~~~~~ 272 (456)
3597 T 4BQK_A 243 TGD--------------------------------------------------DAQTQCIIDHQALPCLLSLLTQNLKKS 272 (456)
3598 T ss_dssp TSC--------------------------------------------------HHHHHHHHTTTHHHHHHHHHHSCCCHH
3599 T ss_pred cCC--------------------------------------------------HHHHHHHHHCChHHHHHHHHHcCCCHH
3600 Confidence 100 000112244567888888887322677
3601
3602
3603 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGNQVFPEV 640 (747)
3604 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~giI~~L 640 (747)
3605 ++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. ... ..+...++++.+
3606 T Consensus 273 ~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l 347 (456)
3607 T 4BQK_A 273 IKKEACWTISNITAGNKD-----QIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPL 347 (456)
3608 T ss_dssp HHHHHHHHHHHHHTSCHH-----HHHHHHHHTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHH
3609 T ss_pred HHHHHHHHHHHHhcCCHH-----HHHHHHHCCcHHHHHHHhhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHH
3610 Confidence 888999999999865332 233334567888899999888888999999999999875 222 233344677888
3611
3612
3613 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL-----------AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLS 709 (747)
3614 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~-----------~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLs 709 (747)
3615 ..++.+ .++.++..++.+|.+++...+.. ...+.+.+.++.+..++.+. ++.++..++.+|.
3616 T Consensus 348 ~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a~~~l~ 420 (456)
3617 T 4BQK_A 348 CDLLIC------PDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHD-NNEIYEKAVKILE 420 (456)
3618 T ss_dssp HHGGGS------SCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHH
3619 T ss_pred HHHhhC------CChHHHHHHHHHHHHHHHHhhhchhccCCCCCHHHHHHHHcchHHHHHHHHcCC-CHHHHHHHHHHHH
3620 Confidence 888776 36788899999999998753321 11122245677788888766 7889999999999
3621
3622
3623 Q NP_000290.2 710 DMWSSKE 716 (747)
3624 Q Consensus 710 nL~~~~~ 716 (747)
3625 +++...+
3626 T Consensus 421 ~l~~~~~ 427 (456)
3627 T 4BQK_A 421 AYWMDEE 427 (456)
3628 T ss_dssp HHCC---
3629 T ss_pred HHhcCcc
3630 Confidence 9887544
3631
3632
3633 No 27
3634 >6BW9_A Importin subunit alpha-3, Protein W; Complex, Hendra virus, Importin, Karyopherin; 1.6A {Homo sapiens}
3635 Probab=98.31 E-value=1.3e-10 Score=118.46 Aligned_cols=366 Identities=17% Similarity=0.199 Sum_probs=218.4 Template_Neff=12.900
3636
3637 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3638 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3639 +++.+...+. ..++.++..++.++..++.........+...++++.+...+.+.+..++..++.++..++.........
3640 T Consensus 53 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 132 (459)
3641 T 6BW9_A 53 ILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDY 132 (459)
3642 T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTCHHHHHH
3643 T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHhhCCHHHHHHHHhcCCChHHHHHHHHHHHHHHcCCHHHHHH
3644 Confidence 4555666665 456778888899998887654433333344567778888887777888999999999887654333333
3645
3646
3647 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEEL-I-ADALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
3648 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~L-v-egiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
3649 +...+++..+...+....+..++..++.++..++......... . .++++.+..++.. .++++
3650 T Consensus 133 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~v 196 (459)
3651 T 6BW9_A 133 VISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHH----------------TDVNI 196 (459)
3652 T ss_dssp HHHTTCHHHHHHTCSTTSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTC----------------CCHHH
3653 T ss_pred HHHCCcHHHHHhccCCCCCHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhc----------------CCHHH
3654 Confidence 3334566777777653345567888888888887643321111 1 1566666666543 13344
3655
3656
3657 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
3658 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
3659 ...+..++..-... .+ ...... -..+++..|...++. .+..-...++..|.++
3660 T Consensus 197 ~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l 249 (459)
3661 T 6BW9_A 197 LVDTVWALSYLTDA------GN--------------EQIQMV-IDSGIVPHLVPLLSH------QEVKVQTAALRAVGNI 249 (459)
3662 T ss_dssp HHHHHHHHHHHHTS------CH--------------HHHHHH-HHTTCHHHHGGGGGC------SSHHHHHHHHHHHHHH
3663 T ss_pred HHHHHHHHHHHhhc------Ch--------------HHHHHH-HhCChHHHHHHHcCC------CCHHHHHHHHHHHHHH
3664 Confidence 44444333221100 00 000000 012334444333321 1111122223333333
3665
3666
3667 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
3668 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
3669 ....+ .....+.+.++++.++.++. +.++
3670 T Consensus 250 ~~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~~~ 278 (459)
3671 T 6BW9_A 250 VTGTD--------------------------------------------------EQTQVVLNCDALSHFPALLT-HPKE 278 (459)
3672 T ss_dssp TTSCH--------------------------------------------------HHHHHHHTTTGGGGCHHHHT-CSCH
3673 T ss_pred HcCCH--------------------------------------------------HHHHHHhcccchhcHHHHhh-CCCH
3674 Confidence 21100 00111234467788888887 4677
3675
3676
3677 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGNQVFPE 639 (747)
3678 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~giI~~ 639 (747)
3679 .++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ......++++.
3680 T Consensus 279 ~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~ 353 (459)
3681 T 6BW9_A 279 KINKEAVWFLSNITAGNQQ-----QVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPP 353 (459)
3682 T ss_dssp HHHHHHHHHHHHHHTSCHH-----HHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHH
3683 T ss_pred HHHHHHHHHHHHHcCCCHH-----HHHHHHHCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHCCcHHH
3684 Confidence 8888999999999865332 223334557888888888888888999999999999864 2 21 23334467788
3685
3686
3687 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA----KQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
3688 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~----~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
3689 +..++.+ .++.++..++.+|.+++...+... ..+...++++.+..++.+. ++.++..++.+|.+++...
3690 T Consensus 354 l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~~ 426 (459)
3691 T 6BW9_A 354 FCNLLTV------KDAQVVQVVLDGLSNILKMAEDEAETIGNLIEECGGLEKIEQLQNHE-NEDIYKLAYEIIDQFFSSD 426 (459)
3692 T ss_dssp HHGGGGC------SCHHHHHHHHHHHHHHHHHCTTTHHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHSCC-
3693 T ss_pred HHHhcCC------CCHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHcCHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC
3694 Confidence 8888776 367888999999999987533221 1233346778888888766 7889999999999998766
3695
3696
3697 Q NP_000290.2 716 EL 717 (747)
3698 Q Consensus 716 ~~ 717 (747)
3699 +.
3700 T Consensus 427 ~~ 428 (459)
3701 T 6BW9_A 427 DI 428 (459)
3702 T ss_dssp --
3703 T ss_pred CC
3704 Confidence 54
3705
3706
3707 No 28
3708 >1WA5_B GTP-BINDING NUCLEAR PROTEIN RAN, IMPORTIN; NUCLEAR TRANSPORT-COMPLEX, NUCLEAR TRANSPORT, EXPORTIN; HET: GTP; 2.0A {CANIS FAMILIARIS} SCOP: a.118.1.1
3709 Probab=98.27 E-value=1.9e-10 Score=121.37 Aligned_cols=134 Identities=13% Similarity=0.098 Sum_probs=85.4 Template_Neff=12.300
3710
3711 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3712 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3713 .+++.+...+.+.++.++..++.++.+++...+.....+...++++.+..++.+.+..++..++.++..++.........
3714 T Consensus 173 ~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 252 (530)
3715 T 1WA5_B 173 DAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDW 252 (530)
3716 T ss_dssp TCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCH
3717 T ss_pred ChHHHHHHHHhCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHhhCCCHHHHHHHHHHHHHHHCCCCCCCCH
3718 Confidence 34556666676777888899999999988654433334444567778888887777888888999998887644222222
3719
3720
3721 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRV 379 (747)
3722 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL 379 (747)
3723 ....++++.+..++. ..++.++..++.++..++.... ....+.. ++++.|+.++
3724 T Consensus 253 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l 308 (530)
3725 T 1WA5_B 253 SVVSQALPTLAKLIY-SMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELL 308 (530)
3726 T ss_dssp HHHGGGHHHHHHHTT-CCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGG
3727 T ss_pred HHHhhHHHHHHHHHh-cCCHHHHHHHHHHHHHHcCCCHHHHHHHHhCCHHHHHHHHh
3728 Confidence 223456666777765 4566777778888887776422 2222222 4455555544
3729
3730
3731 No 29
3732 >5XGC_A Rap1 GTPase-GDP dissociation stimulator 1; armadillo GEF, ONCOPROTEIN; 2.1A {Homo sapiens}
3733 Probab=98.27 E-value=2e-10 Score=117.66 Aligned_cols=409 Identities=17% Similarity=0.214 Sum_probs=224.4 Template_Neff=13.200
3734
3735 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS--PNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
3736 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s--~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
3737 +++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.. .++.++..++.++..++.... ...
3738 T Consensus 35 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~-~~~ 113 (503)
3739 T 5XGC_A 35 LISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELES-SKE 113 (503)
3740 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHSCCCSHHHHHHHHHTTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTSHH-HHH
3741 T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCchHHHHHHHCChHHHHHHHHhccCCCHHHHHHHHHHHHHHHccHH-HHH
3742 Confidence 55666777777778889999999999887543333344445677788888776 467888889999988876532 222
3743
3744
3745 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
3746 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
3747 .+...++++.+...+....++.++..++.++..++........+.. ++++.++.++....... + ....+.
3748 T Consensus 114 ~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~--------~-~~~~~~ 184 (503)
3749 T 5XGC_A 114 QFASTNIAEELVKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSD--------K-EDDITE 184 (503)
3750 T ss_dssp HHTTTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHHHHTTCC--------C-HHHHHH
3751 T ss_pred HHhcCCHHHHHHHHHHhcCChhHHHHHHHHHHHHHcCHHHHHHHHHCCHHHHHHHHHHhcCCCC--------C-HHHHHH
3752 Confidence 2334466777777776222677888899999998876444444444 67777777776432100 0 000000
3753
3754
3755 Q NP_000290.2 403 FFNATGCLRKRL----------------GMRELLALVPQR-------ATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQ 459 (747)
3756 Q Consensus 403 ~~~~~~~~~~~~----------------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (747)
3757 +..+...+..-. -+..++.+.... +...-.+++..+..+..+.. .|.++.|+..+.
3758 T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~-~~~~~~l~~~l~ 263 (503)
3759 T 5XGC_A 185 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVD-NGIVEKLMDLLD 263 (503)
3760 T ss_dssp HHHHHHHHHHHTTSHHHHHHHHGGGTCHHHHHHHHHTTSSCHHHHHHHHHHHHHHCSSHHHHHHHHH-TTHHHHHHHHHH
3761 T ss_pred HHHHHHHHHHHHhCCchHHHHHhcCcccHHHHHHHHccCCCHHHHHHHHHHHHHHHCChhHHHHHHH-CCHHHHHHHHHH
3762 Confidence 000000000000 000111110000 00000011111111110000 011222221111
3763
3764
3765 Q NP_000290.2 460 NCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKG 539 (747)
3766 Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~ 539 (747)
3767 .... .-+..-...++.+|.++. .. . ..
3768 T Consensus 264 ~~~~--~~~~~~~~~a~~~l~~l~-----------------------------------~~---------------~-~~ 290 (503)
3769 T 5XGC_A 264 RHVE--DGNVTVQHAALSALRNLA-----------------------------------IP---------------V-IN 290 (503)
3770 T ss_dssp TTTT--TCCHHHHHHHHHHHHHHT-----------------------------------CS---------------H-HH
3771 T ss_pred hccc--cCCHHHHHHHHHHHHHhc-----------------------------------CC---------------H-HH
3772 Confidence 1000 000000011111111111 00 0 01
3773
3774
3775 Q NP_000290.2 540 SGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS-DVVRSGASL 618 (747)
3776 Q Consensus 540 ~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~-eVr~~AL~a 618 (747)
3777 ...+.+.++++.|..++. +.++.++..++.+|.+++...+. . ........++++.+..++.+.+. .++..++++
3778 T Consensus 291 ~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~---~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~ 365 (503)
3779 T 5XGC_A 291 KAKMLSAGVTEAVLKFLK-SEMPPVQFKLLGTLRMLIDAQAE---A-AEQLGKNVKLVERLVEWCEAKDHAGVMGESNRL 365 (503)
3780 T ss_dssp HHHHHHHTHHHHHHTTTT-CCCHHHHHHHHHHHHHHTTTCHH---H-HHHHHTCHHHHHHHHHHHTCTTCHHHHHHHHHH
3781 T ss_pred HHHHHHcCHHHHHHHHHc-CCCHHHHHHHHHHHHHHHccCHH---H-HHHHccccchHHHHHHHHccCCccchHHHHHHH
3782 Confidence 122345678888888888 46778888999999999875332 0 11221235678888888877665 888999999
3783
3784
3785 Q NP_000290.2 619 LSNMSRHPL---L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCR 693 (747)
3786 Q Consensus 619 LsnLa~~~e---~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~ 693 (747)
3787 |.+++.... . ..+...++++.+..++.+ .++.++..++.+|.+++...+ .....+...++++.+...+.
3788 T Consensus 366 l~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 439 (503)
3789 T 5XGC_A 366 LSALIRHSKSKDVIKTIVQSGGIKHLVTMATS------EHVIMQNEALVALALIAALELGTAEKDLESAKLVQILHRLLA 439 (503)
3790 T ss_dssp HHHHHHHHCCHHHHHHHHHHTHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHC--
3791 T ss_pred HHHHHHHccChhHHHHHHhcChHHHHHHHhcC------CCHHHHHHHHHHHHHHHhCCCCcHHHHHHhccHHHHHHHHHh
3792 Confidence 999976522 2 233455677888888876 367889999999999987542 22333444457888888887
3793
3794
3795 Q NP_000290.2 694 SS-ASPKAAEAARLLLSDMWSSKELQGVLRQQGFDRN 729 (747)
3796 Q Consensus 694 s~-~d~eVr~aAL~aLsnL~~~~~~~~~~~~~~~~~~ 729 (747)
3797 .. .++.++..++.+|.+++...+....+...|+..-
3798 T Consensus 440 ~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~ 476 (503)
3799 T 5XGC_A 440 DERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDV 476 (503)
3800 T ss_dssp -----CGGGGHHHHHHHHHTTCSSCCCSGGGTHHHHH
3801 T ss_pred CCCCcHHHHHHHHHHHHHHhCCHHHHHHHHHhcHHHH
3802 Confidence 32 1578899999999999988776666655555443
3803
3804
3805 No 30
3806 >4BPL_A IMPORTIN SUBUNIT ALPHA-1A, NUCLEOPLASMIN NLS; TRANSPORT PROTEIN, NUCLEAR IMPORT, NUCLEAR; 2.3A {ORYZA SATIVA}
3807 Probab=98.24 E-value=2.4e-10 Score=115.88 Aligned_cols=367 Identities=17% Similarity=0.164 Sum_probs=216.2 Template_Neff=13.000
3808
3809 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3810 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3811 +++.+...+...+ +.++..++.++..++.........+...++++.+..++.+.++.++..++.++..++.........
3812 T Consensus 44 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 123 (454)
3813 T 4BPL_A 44 VVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDL 123 (454)
3814 T ss_dssp CHHHHHHHHSCTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHSCHHHHHH
3815 T ss_pred cHHHHHHHhccCcCHHHHHHHHHHHHHHhcCChhhhHHHhhccHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
3816 Confidence 4455566665543 778888889998887544433333444567778888887777888999999999887653333333
3817
3818
3819 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
3820 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
3821 +...+.+..++..+....++.++..++.++..++........... ++++.|..++.. -++++.
3822 T Consensus 124 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~~ 187 (454)
3823 T 4BPL_A 124 VLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHS----------------NDEEVL 187 (454)
3824 T ss_dssp HHHTTCHHHHHHTCSTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTC----------------CCHHHH
3825 T ss_pred HHHCCcHHHHHHHHccCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHhC----------------CCHHHH
3826 Confidence 333455666666665334567888888888888765433222222 566666666542 123444
3827
3828
3829 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
3830 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
3831 ..+..++..-... .+ ..++.. -..+++..|...++. .+..-...+...|.++.
3832 T Consensus 188 ~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 240 (454)
3833 T 4BPL_A 188 TDACWALSYLSDG------TN--------------DKIQAV-IEAGVCPRLVELLLH------PSPSVLIPALRTVGNIV 240 (454)
3834 T ss_dssp HHHHHHHHHHTSS------CH--------------HHHHHH-HHTTCHHHHHHHTTC------SCHHHHHHHHHHHHHHT
3835 T ss_pred HHHHHHHHHHhcC------Ch--------------HHHHHH-HHCCcHHHHHHHhhC------CChHHHHHHHHHHHHHh
3836 Confidence 4444333221100 00 000000 012334444333321 01111122222222221
3837
3838
3839 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
3840 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
3841 .. +......+.+.++++.++.++....++.
3842 T Consensus 241 ~~--------------------------------------------------~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 270 (454)
3843 T 4BPL_A 241 TG--------------------------------------------------DDAQTQCIIDHQALPCLLSLLTQNLKKS 270 (454)
3844 T ss_dssp TS--------------------------------------------------CHHHHHHHHTTTHHHHHHHHHHSSCCHH
3845 T ss_pred cC--------------------------------------------------CHHHHHHHHHCChHHHHHHHHHhcCCHH
3846 Confidence 10 0001112234567888888887322677
3847
3848
3849 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGNQVFPEV 640 (747)
3850 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~giI~~L 640 (747)
3851 ++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++.. ... ..+...++++.+
3852 T Consensus 271 ~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l 345 (454)
3853 T 4BPL_A 271 IKKEACWTISNITAGNKD-----QIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPL 345 (454)
3854 T ss_dssp HHHHHHHHHHHHHTSCHH-----HHHHHHHHTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHH
3855 T ss_pred HHHHHHHHHHHHhcCCHH-----HHHHHHhCCcHHHHHHHhhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHH
3856 Confidence 888999999999865332 233334567888899999888888999999999999875 222 233444677888
3857
3858
3859 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA-----------KQYFSSSMLNNIINLCRSSASPKAAEAARLLLS 709 (747)
3860 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~-----------~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLs 709 (747)
3861 ..++.+ .++.++..++.+|.+++....... ..+.+.+.++.+..++.+. ++.++..++.+|.
3862 T Consensus 346 ~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~ 418 (454)
3863 T 4BPL_A 346 CDLLIC------PDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHD-NNEIYEKAVKILE 418 (454)
3864 T ss_dssp HHTTTC------SCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHHH
3865 T ss_pred HHHhcC------CChHHHHHHHHHHHHHHHHhhhchhcccCCCCHHHHHHHHcccHHHHHHHHcCC-CHHHHHHHHHHHH
3866 Confidence 888776 367888899999999987532211 1112245677788888766 7889999999999
3867
3868
3869 Q NP_000290.2 710 DMWSSKEL 717 (747)
3870 Q Consensus 710 nL~~~~~~ 717 (747)
3871 .+....+.
3872 T Consensus 419 ~l~~~~~~ 426 (454)
3873 T 4BPL_A 419 AYWMDEED 426 (454)
3874 T ss_dssp HHCC----
3875 T ss_pred HHhcCccc
3876 Confidence 99876544
3877
3878
3879 No 31
3880 >4B8J_A IMPORTIN SUBUNIT ALPHA-1A; TRANSPORT PROTEIN, NUCLEAR LOCALIZATION SIGNAL; 2.001A {ORYZA SATIVA JAPONICA GROUP}
3881 Probab=98.24 E-value=2.6e-10 Score=119.98 Aligned_cols=367 Identities=17% Similarity=0.160 Sum_probs=217.7 Template_Neff=12.400
3882
3883 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3884 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3885 +++.+...+.+.+ +.++..++.+|..++.........+...++++.+..++.+.+..++..++.+|..++.........
3886 T Consensus 118 ~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 197 (528)
3887 T 4B8J_A 118 VVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDL 197 (528)
3888 T ss_dssp CHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHH
3889 T ss_pred cHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCChHHHHHHHhCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
3890 Confidence 4555666665544 778888999998887544433333444557778888887777888899999999887654333333
3891
3892
3893 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
3894 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
3895 +...+++..++..+....++.++..++.++..++........... ++++.|..++.. .++++.
3896 T Consensus 198 ~~~~~~l~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~v~ 261 (528)
3897 T 4B8J_A 198 VLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHS----------------NDEEVL 261 (528)
3898 T ss_dssp HHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTC----------------CCHHHH
3899 T ss_pred HHHCCcHHHHHHHHccCCCHHHHHHHHHHHHHHhCCCCCCCHHHHhhHHHHHHHHhcC----------------CCHHHH
3900 Confidence 333455666666664334567888888999888875433222222 566666666643 133444
3901
3902
3903 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
3904 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
3905 ..+..+|..-.. ..+ ...+.+ ...++++.|+..++. .+..-...+...|.++.
3906 T Consensus 262 ~~a~~~l~~l~~------~~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 314 (528)
3907 T 4B8J_A 262 TDACWALSYLSD------GTN--------------DKIQAV-IEAGVCPRLVELLLH------PSPSVLIPALRTVGNIV 314 (528)
3908 T ss_dssp HHHHHHHHHHTS------SCH--------------HHHHHH-HHTTCHHHHHHHTTC------SCHHHHHHHHHHHHHHT
3909 T ss_pred HHHHHHHHHHhc------CCh--------------HHHHHH-HHCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHH
3910 Confidence 444443322110 000 000000 012344444433321 01111122222222222
3911
3912
3913 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
3914 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
3915 ..- ......+.+.++++.|+.++....++.
3916 T Consensus 315 ~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~~~~~~~ 344 (528)
3917 T 4B8J_A 315 TGD--------------------------------------------------DAQTQCIIDHQALPCLLSLLTQNLKKS 344 (528)
3918 T ss_dssp TSC--------------------------------------------------HHHHHHHHTTTHHHHHHHHHHSCCCHH
3919 T ss_pred cCC--------------------------------------------------HHHHHHHHHCChHHHHHHHHhcCCCHH
3920 Confidence 100 001112245567888888887322677
3921
3922
3923 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGNQVFPEV 640 (747)
3924 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~giI~~L 640 (747)
3925 ++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...++++.|
3926 T Consensus 345 v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l 419 (528)
3927 T 4B8J_A 345 IKKEACWTISNITAGNKD-----QIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPL 419 (528)
3928 T ss_dssp HHHHHHHHHHHHHTSCHH-----HHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHH
3929 T ss_pred HHHHHHHHHHHHHcCCHH-----HHHHHHHCCchHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHH
3930 Confidence 888999999999865332 233334567888999999888888999999999999875 2 22 233344677888
3931
3932
3933 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL-----------AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLS 709 (747)
3934 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~-----------~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLs 709 (747)
3935 ..++.+ .++.++..++.+|.+++...... ...+.+.++++.|..++.+. ++.++..|+.+|.
3936 T Consensus 420 ~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a~~~l~ 492 (528)
3937 T 4B8J_A 420 CDLLIC------PDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHD-NNEIYEKAVKILE 492 (528)
3938 T ss_dssp HHGGGC------SCHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHGGGCS-SHHHHHHHHHHHH
3939 T ss_pred HHHccC------CCHHHHHHHHHHHHHHHHHhHHcHhhcCCCCcHHHHHHHHcCHHHHHHHHhcCC-CHHHHHHHHHHHH
3940 Confidence 888776 36788899999999998753221 11122345677788888766 7889999999999
3941
3942
3943 Q NP_000290.2 710 DMWSSKEL 717 (747)
3944 Q Consensus 710 nL~~~~~~ 717 (747)
3945 +++...+.
3946 T Consensus 493 ~l~~~~~~ 500 (528)
3947 T 4B8J_A 493 AYWMDEED 500 (528)
3948 T ss_dssp HHCC----
3949 T ss_pred Hhcccccc
3950 Confidence 98875544
3951
3952
3953 No 32
3954 >5T94_B Guanine nucleotide exchange factor SRM1; Nuclear Import, Importin alpha, RCC1; 2.631A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
3955 Probab=98.23 E-value=2.9e-10 Score=120.53 Aligned_cols=364 Identities=15% Similarity=0.171 Sum_probs=219.0 Template_Neff=12.200
3956
3957 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3958 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3959 +++.++..+.+.+ +.++..++.+|..++.........+...++++.+...+.+.++.++..++.++..++.........
3960 T Consensus 131 ~~~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 210 (542)
3961 T 5T94_B 131 VVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDY 210 (542)
3962 T ss_dssp CHHHHHHTTSSSSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCHHHHHH
3963 T ss_pred hHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCChHHHHHHhcCChHHHHHHHHhCCCHHHHHHHHHHHHHHHCCCHHHHHH
3964 Confidence 4555666665443 677888899998887654333333334567777888887777888999999999988654433333
3965
3966
3967 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
3968 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
3969 +...++++.+..++. ..++.++..++.+|..++.... ....... ++++.|+.++.. .++++
3970 T Consensus 211 ~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~ 273 (542)
3971 T 5T94_B 211 VLQCNAMEPILGLFN-SNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYS----------------MDTET 273 (542)
3972 T ss_dssp HHHTTCHHHHHHGGG-CCCHHHHHHHHHHHHHHSCCSTTCCCHHHHGGGHHHHHHHTTC----------------CCHHH
3973 T ss_pred HHHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCCCCCCHHHHhcHHHHHHHHHhc----------------CCHHH
3974 Confidence 344467777777776 5567788889999998887542 2222222 566777766642 12334
3975
3976
3977 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
3978 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
3979 ...+..+|..-... -+ ...+.+. -.+++..|...++. .+..-...+...|.++
3980 T Consensus 274 ~~~a~~~L~~l~~~------~~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l 326 (542)
3981 T 5T94_B 274 LVDACWAISYLSDG------PQ--------------EAIQAVI-DVRIPKRLVELLSH------ESTLVQTPALRAVGNI 326 (542)
3982 T ss_dssp HHHHHHHHHHHSSS------SH--------------HHHHHHH-HTTCHHHHHHTTSC------SSHHHHHHHHHHHHHH
3983 T ss_pred HHHHHHHHHHHcCC------CH--------------HHHHHHH-hCCHHHHHHHHhcC------CCHHHHHHHHHHHHHH
3984 Confidence 33333333221100 00 0000000 01233333322221 1111112222222222
3985
3986
3987 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
3988 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
3989 ...- ......+.+.++++.|+.++. +.++
3990 T Consensus 327 ~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~ 355 (542)
3991 T 5T94_B 327 VTGN--------------------------------------------------DLQTQVVINAGVLPALRLLLS-SPKE 355 (542)
3992 T ss_dssp TTSC--------------------------------------------------HHHHHHHHHTTHHHHHHHHTT-CSSH
3993 T ss_pred HcCC--------------------------------------------------HHHHHHHHHCChHHHHHHHhh-CCCH
3994 Confidence 2100 001111234567888888887 4677
3995
3996
3997 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL----L-HRVMGNQVF 637 (747)
3998 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e----~-~~ll~~giI 637 (747)
3999 .++..++++|.+++...+. ....+...++++.|..++.+.++.++..++++|.+++.... . ..+...+++
4000 T Consensus 356 ~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~ 430 (542)
4001 T 5T94_B 356 NIKKEACWTISNITAGNTE-----QIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCI 430 (542)
4002 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHGGGTTCTHHHHHHHHTTCH
4003 T ss_pred HHHHHHHHHHHHHhCCCHH-----HHHHHHHCCchHHHHHHHHcCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHCCCH
4004 Confidence 8888999999999875332 23333456788888888888888899999999999987621 1 223345678
4005
4006
4007 Q NP_000290.2 638 PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-----------LAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
4008 Q Consensus 638 ~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-----------~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
4009 +.|..++.+ .++.++..++.+|.+++...+. ....+.+.++++.|..++.+. ++.++..|+.
4010 T Consensus 431 ~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~-~~~v~~~a~~ 503 (542)
4011 T 5T94_B 431 KPLCDLLEI------ADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNE-NDKIYEKAYK 503 (542)
4012 T ss_dssp HHHHHHHHH------CCHHHHHHHHHHHHHHHHHHHHHTTTTTCSSCTTTHHHHHTTCHHHHHTTSSSC-CHHHHHHHHH
4013 T ss_pred HHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHH
4014 Confidence 888888876 3677888999999999875332 123344456788888888766 7889999999
4015
4016
4017 Q NP_000290.2 707 LLSDMWSSKE 716 (747)
4018 Q Consensus 707 aLsnL~~~~~ 716 (747)
4019 +|.+++...+
4020 T Consensus 504 ~l~~l~~~~~ 513 (542)
4021 T 5T94_B 504 IIETYFGEEE 513 (542)
4022 T ss_dssp HHHHHC----
4023 T ss_pred HHHHHhCcCc
4024 Confidence 9999987543
4025
4026
4027 No 33
4028 >4TNM_A Importin-alpha3 / MOS6; armadillo repeat; 2.9A {Arabidopsis thaliana}
4029 Probab=98.21 E-value=3.2e-10 Score=119.57 Aligned_cols=369 Identities=17% Similarity=0.184 Sum_probs=220.4 Template_Neff=12.300
4030
4031 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
4032 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
4033 +++.+...+.+.+ +.++..++.++..++.........+...++++.+..++.+.++.++..++.++..++.........
4034 T Consensus 119 ~~~~l~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 198 (531)
4035 T 4TNM_A 119 VVPRVVKFLSRDDFPKLQFEAAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQAVWALGNVAGDSPKCRDL 198 (531)
4036 T ss_pred CHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHccCCCHHHHHHHHHHHHHHhcCCHHHHHH
4037 Confidence 4555666665544 778888889998887644333333444567778888887777888999999999887653333333
4038
4039
4040 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
4041 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
4042 +...+++..+...+....+..++..++.++..++........... ++++.|..++... ++++.
4043 T Consensus 199 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v~ 262 (531)
4044 T 4TNM_A 199 VLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKPPPAFEQTQPALPVLERLVQSM----------------DEEVL 262 (531)
4045 T ss_pred HHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCCCCcchhhhcchHHHHHHHhcCC----------------CHHHH
4046 Confidence 333456666666664334567888888898888765433222222 5666666665431 33444
4047
4048
4049 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
4050 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
4051 ..+..+|..-.. .+......-.-.+++..|...+.. .+..-...+...|.++.
4052 T Consensus 263 ~~a~~~l~~l~~---------------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l~ 315 (531)
4053 T 4TNM_A 263 TDACWALSYLSD---------------------NSNDKIQAVIEAGVVPRLIQLLGH------SSPSVLIPALRTIGNIV 315 (531)
4054 T ss_pred HHHHHHHHHHhC---------------------CCHHHHHHHHHCChHHHHHHHHhC------CCHHHHHHHHHHHHHHH
4055 Confidence 444433322110 000000000012334444333321 11112222233333322
4056
4057
4058 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
4059 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
4060 ...+ .....+.+.++++.|+.++....++.
4061 T Consensus 316 ~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~~~~~~~ 345 (531)
4062 T 4TNM_A 316 TGDD--------------------------------------------------LQTQMVLDQQALPCLLNLLKNNYKKS 345 (531)
4063 T ss_pred CCCH--------------------------------------------------HHHHHHHHCCcHHHHHHHhcCCCCHH
4064 Confidence 1100 00111234467788888887323567
4065
4066
4067 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PL-L-HRVMGNQVFPEV 640 (747)
4068 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e-~-~~ll~~giI~~L 640 (747)
4069 ++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++++|.+++.. .. . ..+...++++.|
4070 T Consensus 346 v~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l 420 (531)
4071 T 4TNM_A 346 IKKEACWTISNITAGNAD-----QIQAVIDAGIIQSLVWVLQSAEFEVKKEAAWGISNATSGGTHDQIKFMVSQGCIKPL 420 (531)
4072 T ss_pred HHHHHHHHHHHHHCCCHH-----HHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCcHHHH
4073 Confidence 888999999999875332 233334566888888888887888999999999999875 21 2 233344677888
4074
4075
4076 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQ------------PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
4077 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s------------~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
4078 ..++.+ .++.++..++.+|.+++... ......+.+.++++.|..++.+. ++.++..|+.+|
4079 T Consensus 421 ~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a~~~l 493 (531)
4080 T 4TNM_A 421 CDLLTC------PDLKVVTVCLEALENILVVGEAEKNLGHTGEDNLYAQMIDEAEGLEKIENLQSHD-NNDIYDKAVKIL 493 (531)
4081 T ss_pred HHHccC------CCHHHHHHHHHHHHHHHhhCccchhhcCCCCcHHHHHHHHHCCcHHHHHHHhcCC-CHHHHHHHHHHH
4082 Confidence 888776 36788899999999998531 11223334446788888888776 788999999999
4083
4084
4085 Q NP_000290.2 709 SDMWSSKELQG 719 (747)
4086 Q Consensus 709 snL~~~~~~~~ 719 (747)
4087 .+++...+...
4088 T Consensus 494 ~~l~~~~~~~~ 504 (531)
4089 T 4TNM_A 494 ETFWTEDNEEE 504 (531)
4090 T ss_pred HHHhcCCCCcc
4091 Confidence 99987655443
4092
4093
4094 No 34
4095 >5TBK_C Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
4096 Probab=98.21 E-value=3.4e-10 Score=119.34 Aligned_cols=366 Identities=16% Similarity=0.161 Sum_probs=222.2 Template_Neff=12.200
4097
4098 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESA-KQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNK 322 (747)
4099 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~-~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
4100 .+++.+...+.+.++.++..++.+|..++...... ...+...++++.+...+... +..++..++.++..++.......
4101 T Consensus 71 ~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~ 150 (521)
4102 T 5TBK_C 71 TSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQT 150 (521)
4103 T ss_dssp CCSSTHHHHTTSSCHHHHHHHHHHHHHHHHTTTCCCTTSCTTTTHHHHHHHHHHCCSCHHHHHHHHHHHHHHHTSCHHHH
4104 T ss_pred hcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCCCCCHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHH
4105 Confidence 35566677777777788888999998887643221 12233346677777777643 67788888999988876543333
4106
4107
4108 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDP 400 (747)
4109 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~ 400 (747)
4110 ..+...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|+.++... .++
4111 T Consensus 151 ~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~~ 214 (521)
4112 T 5TBK_C 151 QAVVQSNAVPLFLRLLH-SPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS---------------IPI 214 (521)
4113 T ss_dssp HHHHTTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCHHHHHTTCCTT---------------SCH
4114 T ss_pred HHHHHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhCCC---------------CCH
4115 Confidence 33334457777777776 5567888899999999886432 2222333 6677777766532 123
4116
4117
4118 Q NP_000290.2 401 EVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
4119 Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
4120 ++...+..+|..-. .............+++..|...+.. .+..-...+..+|.
4121 T Consensus 215 ~~~~~a~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~ 267 (521)
4122 T 5TBK_C 215 TFLRNVTWVMVNLC---------------------RHKDPPPPMETIQEILPALCVLIHH------TDVNILVDTVWALS 267 (521)
4123 T ss_dssp HHHHHHHHHHHHHH---------------------CCCSSCCCHHHHHHHHHHHHHHTTC------SCHHHHHHHHHHHH
4124 T ss_pred HHHHHHHHHHHHHH---------------------cCCCCCCCHHHHHHHHHHHHHHhhC------CCHHHHHHHHHHHH
4125 Confidence 33333433332211 0000001111122333333333221 11222223333333
4126
4127
4128 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
4129 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
4130 ++...-+ .....+.+.++++.++.++. +.
4131 T Consensus 268 ~l~~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~ 296 (521)
4132 T 5TBK_C 268 YLTDAGN--------------------------------------------------EQIQMVIDSGIVPHLVPLLS-HQ 296 (521)
4133 T ss_dssp HHHHHCH--------------------------------------------------HHHHHHHHTTCHHHHGGGGG-CS
4134 T ss_pred HHhccCh--------------------------------------------------HHHHHHHHCChHHHHHHHhc-CC
4135 Confidence 3321100 01112234567788888887 46
4136
4137
4138 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFP 638 (747)
4139 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~ 638 (747)
4140 ++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++++|.+++... .. ..+...++++
4141 T Consensus 297 ~~~v~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~ 371 (521)
4142 T 5TBK_C 297 EVKVQTAALRAVGNIVTGTDE-----QTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVP 371 (521)
4143 T ss_dssp SHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTCGGGHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTCHH
4144 T ss_pred CHHHHHHHHHHHHHHHcCCHH-----HHHHHHhCCHHHhHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHH
4145 Confidence 677888899999998875332 2233344578888888888888889999999999998762 22 2334456778
4146
4147
4148 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
4149 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
4150 .|..++.+ .++.++..++.+|.+++.... .....+.+.++++.|..++.+. ++.++..++.+|.+++...+
4151 T Consensus 372 ~l~~~l~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~~~~L~~~l~~~-~~~v~~~a~~~l~~l~~~~~ 443 (521)
4152 T 5TBK_C 372 MIIHLLDK------GDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVK-DAQVVQVVLDGLSNILKMAE 443 (521)
4153 T ss_dssp HHHHHHHH------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTTCHHHHHGGGGSS-CHHHHHHHHHHHHHHHHHCS
4154 T ss_pred HHHHHHHh------CCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHhH
4155 Confidence 88888776 367788999999999985322 2233344456788888888766 77888999999999887543
4156
4157
4158 No 35
4159 >5TBK_D Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
4160 Probab=98.21 E-value=3.4e-10 Score=119.34 Aligned_cols=366 Identities=16% Similarity=0.161 Sum_probs=221.8 Template_Neff=12.200
4161
4162 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESA-KQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNK 322 (747)
4163 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~-~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
4164 .+++.+...+.+.++.++..++.+|..++...... ...+...++++.+...+... +..++..++.++..++.......
4165 T Consensus 71 ~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~ 150 (521)
4166 T 5TBK_D 71 TSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQT 150 (521)
4167 T ss_dssp -CCSHHHHHTTSSCHHHHHHHHHHHHTHHHHHHSSCSHHHHHHTHHHHHHHHHHCCSCHHHHHHHHHHHHHHHTSCHHHH
4168 T ss_pred hcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCCCCCHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHH
4169 Confidence 35566677777777788888999998887643221 12233346677777777643 67788888999988876543333
4170
4171
4172 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDP 400 (747)
4173 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~ 400 (747)
4174 ..+...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|+.++... .++
4175 T Consensus 151 ~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~~ 214 (521)
4176 T 5TBK_D 151 QAVVQSNAVPLFLRLLH-SPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS---------------IPI 214 (521)
4177 T ss_dssp HHHHTTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHHHCHHHHHHHHHTCCHHHHHTTCCTT---------------SCH
4178 T ss_pred HHHHHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhCCC---------------CCH
4179 Confidence 33334457777777776 5567888899999999886432 2222333 6677777766532 123
4180
4181
4182 Q NP_000290.2 401 EVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
4183 Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
4184 ++...+..+|..-. .............+++..|...+.. .+..-...+..+|.
4185 T Consensus 215 ~~~~~a~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~ 267 (521)
4186 T 5TBK_D 215 TFLRNVTWVMVNLC---------------------RHKDPPPPMETIQEILPALCVLIHH------TDVNILVDTVWALS 267 (521)
4187 T ss_dssp HHHHHHHHHHHHHH---------------------CCCSSCCCHHHHHHHHHHHHHHTTC------SCHHHHHHHHHHHH
4188 T ss_pred HHHHHHHHHHHHHH---------------------cCCCCCCCHHHHHHHHHHHHHHhhC------CCHHHHHHHHHHHH
4189 Confidence 33333433332211 0000001111122333333333221 11222223333333
4190
4191
4192 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
4193 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
4194 ++...-+ .....+.+.++++.++.++. +.
4195 T Consensus 268 ~l~~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~ 296 (521)
4196 T 5TBK_D 268 YLTDAGN--------------------------------------------------EQIQMVIDSGIVPHLVPLLS-HQ 296 (521)
4197 T ss_dssp HHHHHCH--------------------------------------------------HHHHHHHHTTCHHHHGGGGG-CS
4198 T ss_pred HHhccCh--------------------------------------------------HHHHHHHHCChHHHHHHHhc-CC
4199 Confidence 3321100 01112234567788888887 46
4200
4201
4202 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFP 638 (747)
4203 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~ 638 (747)
4204 ++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++++|.+++... .. ..+...++++
4205 T Consensus 297 ~~~v~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~ 371 (521)
4206 T 5TBK_D 297 EVKVQTAALRAVGNIVTGTDE-----QTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVP 371 (521)
4207 T ss_dssp SHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTCGGGHHHHHHCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTCHH
4208 T ss_pred CHHHHHHHHHHHHHHHcCCHH-----HHHHHHhCCHHHhHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHH
4209 Confidence 677888899999998875332 2233344578888888888888889999999999998762 22 2334456778
4210
4211
4212 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
4213 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
4214 .|..++.+ .++.++..++.+|.+++.... .....+.+.++++.|..++.+. ++.++..++.+|.+++...+
4215 T Consensus 372 ~l~~~l~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~~~~L~~~l~~~-~~~v~~~a~~~l~~l~~~~~ 443 (521)
4216 T 5TBK_D 372 MIIHLLDK------GDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVK-DAQVVQVVLDGLSNILKMAE 443 (521)
4217 T ss_dssp HHHHHHHH------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTTCHHHHHGGGGSS-CHHHHHHHHHHHHHHHHHCS
4218 T ss_pred HHHHHHHh------CCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHhH
4219 Confidence 88888776 367788999999999985322 2233344456788888888766 77888999999999887543
4220
4221
4222 No 36
4223 >2Z6G_A B-catenin; Full-Length, Beta-Catenin, CELL ADHESION; 3.4A {Danio rerio}
4224 Probab=98.14 E-value=6.4e-10 Score=126.67 Aligned_cols=381 Identities=19% Similarity=0.217 Sum_probs=223.9 Template_Neff=10.700
4225
4226 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
4227 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
4228 .+++.+..++.+.+..++..++.+|.+++.........+...++++.+..++...+..++..++.+|..++.........
4229 T Consensus 234 ~~i~~L~~lL~~~~~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 313 (780)
4230 T 2Z6G_A 234 GGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLI 313 (780)
4231 T ss_pred CcHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
4232 Confidence 34566666776667788888999998887654333333333567777888887777888889999999888644433333
4233
4234
4235 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
4236 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
4237 +...+++..++.++....+..++..++.+|..++........+.. ++++.|..++... ++++.
4238 T Consensus 314 ~~~~~~~~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~l~~L~~~l~~~----------------~~~v~ 377 (780)
4239 T 2Z6G_A 314 ILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP----------------SQRLV 377 (780)
4240 T ss_pred HHHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHCCHHHHHHHHccCC----------------CHHHH
4241 Confidence 333456777777776223567788888888888765443333333 6677777666531 23343
4242
4243
4244 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
4245 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
4246 ..+..+|+.-.. ...... ...+++..|...+.. .+..-...+..+|.++.
4247 T Consensus 378 ~~al~~L~~l~~---------------------~~~~~~---~~~~~l~~L~~~l~~------~~~~v~~~a~~~L~~l~ 427 (780)
4248 T 2Z6G_A 378 QNCLWTLRNLSD---------------------AATKQE---GMEGLLGTLVQLLGS------DDINVVTCAAGILSNLT 427 (780)
4249 T ss_pred HHHHHHHHHHhc---------------------CCCCHH---HHcChHHHHHHHhcC------CCHHHHHHHHHHHHHHH
4250 Confidence 344433332110 000000 012333333333221 01111222222333322
4251
4252
4253 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK-SKKD 562 (747)
4254 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s-s~d~ 562 (747)
4255 ... ......+...++++.|+..+.. ..++
4256 T Consensus 428 ~~~--------------------------------------------------~~~~~~~~~~~~l~~L~~~l~~~~~~~ 457 (780)
4257 T 2Z6G_A 428 CNN--------------------------------------------------YKNKMMVCQVGGIEALVRTVLRAGDRE 457 (780)
4258 T ss_pred cCC--------------------------------------------------HHHHHHHHHCChHHHHHHHHhcCCCCH
4259 Confidence 110 0001112345667777776652 1456
4260
4261
4262 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEV 640 (747)
4263 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~L 640 (747)
4264 .++..++.+|.+++..... .......+...++++.|+.++... ++.++..++.+|.+++..... ..+...++++.|
4265 T Consensus 458 ~v~~~a~~~L~~l~~~~~~--~~~~~~~~~~~~~i~~L~~ll~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~l~~L 535 (780)
4266 T 2Z6G_A 458 DITEPAICALRHLTSRHQD--AEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 535 (780)
4267 T ss_pred HHHHHHHHHHHHHHcCCcc--HHHHHHHHHHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCHHHHHHHHhCChHHHH
4268 Confidence 7788899999998865321 000112223456788888888765 577889999999999876333 233455677788
4269
4270
4271 Q NP_000290.2 641 TRLLTSHTGN----------------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
4272 Q Consensus 641 l~LL~s~s~~----------------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
4273 +.++...... ...+..++..++.+|.+|+.. ......+...++++.|+.++.+. ++.++..+
4274 T Consensus 536 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~aL~~L~~~-~~~~~~~~~~~~l~~L~~~l~~~-~~~v~~~a 613 (780)
4275 T 2Z6G_A 536 VQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILARD-IHNRIVIRGLNTIPLFVQLLYSP-IENIQRVA 613 (780)
4276 T ss_pred HHHhcCCCHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHHHhCC-hhHHHHHHhCCcHHHHHHHhcCC-CHHHHHHH
4277 Confidence 8777652000 000234888999999999864 44444455556788888888776 78899999
4278
4279
4280 Q NP_000290.2 705 RLLLSDMWSSKELQGVLRQQG 725 (747)
4281 Q Consensus 705 L~aLsnL~~~~~~~~~~~~~~ 725 (747)
4282 +.+|.+++...+....+...|
4283 T Consensus 614 ~~~L~~l~~~~~~~~~~~~~~ 634 (780)
4284 T 2Z6G_A 614 AGVLCELAQDKEAAEAIEAEG 634 (780)
4285 T ss_pred HHHHHHHhcCHHHHHHHHHCC
4286 Confidence 999999997766554444433
4287
4288
4289 No 37
4290 >1JDH_A BETA-CATENIN, hTcf-4; BETA-CATENIN, TCF4, PROTEIN-PROTEIN COMPLEX, TRANSCRIPTION; 1.9A {Homo sapiens} SCOP: a.118.1.1
4291 Probab=98.13 E-value=6.1e-10 Score=114.95 Aligned_cols=326 Identities=17% Similarity=0.189 Sum_probs=198.8 Template_Neff=13.100
4292
4293 Q NP_000290.2 286 LGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKE 365 (747)
4294 Q Consensus 286 ~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~ 365 (747)
4295 .++++.+...+.+.+..++..++.++..++.............++++.+...+....++.++..++.++..+........
4296 T Consensus 16 ~~~i~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~ 95 (529)
4297 T 1JDH_A 16 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLL 95 (529)
4298 T ss_dssp -CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHH
4299 T ss_pred HhhHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHHHHHHHHhCcchHHHHHHHhhCCCCHHHHHHHHHHHHHHhcCHHHHH
4300 Confidence 45677777778777788888999999888765322211111134667777777533567788899999998876544443
4301
4302
4303 Q NP_000290.2 366 ELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTM 444 (747)
4304 Q Consensus 366 ~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (747)
4305 .+.. ++++.|+.++..+ ++++-..+..++..-.... +..+...
4306 T Consensus 96 ~~~~~~~~~~l~~~l~~~----------------~~~~~~~a~~~l~~l~~~~--------------------~~~~~~~ 139 (529)
4307 T 1JDH_A 96 AIFKSGGIPALVKMLGSP----------------VDSVLFYAITTLHNLLLHQ--------------------EGAKMAV 139 (529)
4308 T ss_dssp HHHHTTHHHHHHHHTTCS----------------CHHHHHHHHHHHHHHHHHC--------------------TTHHHHH
4309 T ss_pred HHHHcCCHHHHHHHhcCC----------------CHHHHHHHHHHHHHHHcCC--------------------cchHHHH
4310 Confidence 4444 6777777776532 3444444444433211100 0000100
4311
4312
4313 Q NP_000290.2 445 RNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNN 524 (747)
4314 Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (747)
4315 .-.++++.|...++. -+..-...+...|.++...-
4316 T Consensus 140 -~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~-------------------------------------- 174 (529)
4317 T 1JDH_A 140 -RLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGN-------------------------------------- 174 (529)
4318 T ss_dssp -HHHTHHHHHHHGGGC------CCHHHHHHHHHHHHHHHTTC--------------------------------------
4319 T ss_pred -HHcChHHHHHHHhcC------CCHHHHHHHHHHHHHHhcCC--------------------------------------
4320 Confidence 012444544444332 12222233333333332100
4321
4322
4323 Q NP_000290.2 525 NYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL 604 (747)
4324 Q Consensus 525 ~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL 604 (747)
4325 ......+.+.++++.++.++....++.++..++.+|.+++.... ....+...++++.+..++
4326 T Consensus 175 ------------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~------~~~~~~~~~~~~~l~~~l 236 (529)
4327 T 1JDH_A 175 ------------QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS------NKPAIVEAGGMQALGLHL 236 (529)
4328 T ss_dssp ------------HHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTT------HHHHHHHTTHHHHHHTTT
4329 T ss_pred ------------HHHHHHHHHCChhHHHHHHHccCCcHHHHHHHHHHHHHHhcCCc------cHHHHHHCCHHHHHHHHc
4330 Confidence 01112234566788888888742366788889999999887532 133334567888899988
4331
4332
4333 Q NP_000290.2 605 QSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSM 684 (747)
4334 Q Consensus 605 ~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~gi 684 (747)
4335 .+.++.++..++++|.+++......... .++++.+..++.+ .++.++..++.+|.+++...+.....+...+.
4336 T Consensus 237 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~-~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~ 309 (529)
4337 T 1JDH_A 237 TDPSQRLVQNCLWTLRNLSDAATKQEGM-EGLLGTLVQLLGS------DDINVVTCAAGILSNLTCNNYKNKMMVCQVGG 309 (529)
4338 T ss_dssp TSSCHHHHHHHHHHHHHHHTTCTTCSCC-HHHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTH
4339 T ss_pred cCCCHHHHHHHHHHHHHHcchhhhHHHH-chHHHHHHHHhCC------CCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCH
4340 Confidence 8888889999999999998763221111 4566777777765 36788899999999998765555555666677
4341
4342
4343 Q NP_000290.2 685 LNNIINLCRS-SASPKAAEAARLLLSDMWSSKEL 717 (747)
4344 Q Consensus 685 L~~Ll~LL~s-~~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
4345 ++.++..+.. ..++.++..++.+|.+++.....
4346 T Consensus 310 ~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~ 343 (529)
4347 T 1JDH_A 310 IEALVRTVLRAGDREDITEPAICALRHLTSRHQE 343 (529)
4348 T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTT
4349 T ss_pred HHHHHHHHHhcCCChHhHHHHHHHHHHHhcCccc
4350 Confidence 8888876652 12577888999999998866553
4351
4352
4353 No 38
4354 >2Z6H_A Catenin beta-1; Beta-Catenin, C-terminal Domain, Activator, Cell; 2.2A {Homo sapiens}
4355 Probab=98.12 E-value=7.3e-10 Score=121.28 Aligned_cols=378 Identities=20% Similarity=0.248 Sum_probs=205.2 Template_Neff=11.700
4356
4357 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
4358 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
4359 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+...+..++..++.++..++.........+
4360 T Consensus 99 ~i~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 178 (644)
4361 T 2Z6H_A 99 GIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLII 178 (644)
4362 T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
4363 Confidence 45566666766777888899999998876543333333345677778888877778888899999998886444333334
4364
4365
4366 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
4367 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
4368 ...+++..+...+....+..++..++.++..++........+.. ++++.|..++... ++++..
4369 T Consensus 179 ~~~~~~~~L~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~l~~l~~~l~~~----------------~~~~~~ 242 (644)
4370 T 2Z6H_A 179 LASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP----------------SQRLVQ 242 (644)
4371 T ss_pred HHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHccChHHHHHHHHCCHHHHHHHHhcCC----------------CHHHHH
4372 Confidence 44457777777776333567788888888888765443333333 6666676666532 111222
4373
4374
4375 Q NP_000290.2 405 NATGCLRKRL-----------GMRELLALVPQ-------RATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASR 466 (747)
4376 Q Consensus 405 ~~~~~~~~~~-----------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (747)
4377 .+..+|..-. .+..++.++.. .+...-.++...+......-.-.+.++.|...+.. ..
4378 T Consensus 243 ~a~~~L~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~----~~ 318 (644)
4379 T 2Z6H_A 243 NCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLR----AG 318 (644)
4380 T ss_pred HHHHHHHHHhcCCCCHHHHCchHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCHHHHHHHHHhc----CC
4381 Confidence 2222221100 01111111110 00000111111111000000112334444333221 01
4382
4383
4384 Q NP_000290.2 467 CDDKSVENCMCVLHNLSYRLDAEV------------PTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEE 534 (747)
4385 Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (747)
4386 -+..-.+.+...|.++........ +.-.+.+... .+....+....++.+-.
4387 T Consensus 319 ~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~v~~~a~~~L~~l~---------------- 381 (644)
4388 T 2Z6H_A 319 DREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP-SHWPLIKATVGLIRNLA---------------- 381 (644)
4389 T ss_pred CCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHCCcHHHHHHHhcCC-CCHHHHHHHHHHHHHHh----------------
4390 Confidence 123345666777777765433210 0000000000 00000011111111111
4391
4392
4393 Q NP_000290.2 535 TNPKGSGWLYHSDAIRTYLNLMGKSKK----------------------DATLEACAGALQNLTASKGLMSSGMSQLIGL 592 (747)
4394 Q Consensus 535 ~ni~~~~~lve~G~I~~LL~LL~ss~d----------------------~eVr~~AL~aL~nLs~~s~~~s~~~~~~lli 592 (747)
4395 ........+.+.++++.|+.++.. .. ..++..++.+|.+++..... ...+.
4396 T Consensus 382 ~~~~~~~~l~~~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~L~~l~~~~~~------~~~~~ 454 (644)
4397 T 2Z6H_A 382 LCPANHAPLREQGAIPRLVQLLVR-AHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN------RIVIR 454 (644)
4398 T ss_pred cCHHHHHHHHHCCcHHHHHHHHcc-CCHHHHHHHhcCCchhhhhcCCCCHHHHHHHHHHHHHHhcCcch------HHHHH
4399 Confidence 001112234566788888888863 32 23777888899988865321 22334
4400
4401
4402 Q NP_000290.2 593 KEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
4403 Q Consensus 593 e~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
4404 ..++++.|+.++.+.++.++..++.+|.+++..... ..+...++++.|..++.+ .++.++..++.+|.+++..
4405 T Consensus 455 ~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~L~~~l~~------~~~~v~~~a~~~L~~l~~~ 528 (644)
4406 T 2Z6H_A 455 GLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHS------RNEGVATYAAAVLFRMSED 528 (644)
4407 T ss_pred HCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCHHHHHHHHHCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHhCC
4408 Confidence 457888899989888889999999999999876433 233445778888888876 3678999999999999875
4409
4410
4411 Q NP_000290.2 672 QP 673 (747)
4412 Q Consensus 672 s~ 673 (747)
4413 .+
4414 T Consensus 529 ~~ 530 (644)
4415 T 2Z6H_A 529 KP 530 (644)
4416 T ss_pred Cc
4417 Confidence 43
4418
4419
4420 No 39
4421 >6SA8_A ring-like DARPin-Armadillo fusion H83_D01, LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG; protein fusion, DARPin, Armadillo, shared; 2.4A {synthetic construct}
4422 Probab=98.11 E-value=7.7e-10 Score=121.20 Aligned_cols=342 Identities=20% Similarity=0.251 Sum_probs=215.3 Template_Neff=11.900
4423
4424 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
4425 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
4426 ..+++.+...+.+.+..++..++..|..++.........+...++++.+..++.+.++.++..++.++..++........
4427 T Consensus 177 ~~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~ 256 (671)
4428 T 6SA8_A 177 KKILKDLVKKLSSPNENELQNALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 256 (671)
4429 T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHH
4430 T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHH
4431 Confidence 44566677777777778888899999888765433333444456778888888877888899999999988764443333
4432
4433
4434 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPE 401 (747)
4435 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~ 401 (747)
4436 .+...+.++.+...+. +.++.++..++.++..++... .....+.. ++++.|+.++... +++
4437 T Consensus 257 ~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~----------------~~~ 319 (671)
4438 T 6SA8_A 257 AVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP----------------NEQ 319 (671)
4439 T ss_dssp HHHHTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS----------------CHH
4440 T ss_pred HHHHcCHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCcHHHHHHHHhChHHHHHHHhcCC----------------cHH
4441 Confidence 3444567778888876 566788889999999888643 22233333 6777777776531 344
4442
4443
4444 Q NP_000290.2 402 VFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHN 481 (747)
4445 Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (747)
4446 +-..+..+|..-.. ..+ ..+..+. -.++++.|+..++.. +....+.++..|.+
4447 T Consensus 320 v~~~a~~~L~~l~~------~~~--------------~~~~~~~-~~~~l~~l~~~l~~~------~~~~~~~a~~~L~~ 372 (671)
4448 T 6SA8_A 320 ILQEALWALSNIAS------GGN--------------EQIQAVI-DAGALPALVQLLSSP------NEQILQEALWALSN 372 (671)
4449 T ss_dssp HHHHHHHHHHHHTT------SCH--------------HHHHHHH-HTTHHHHHHHHTTCS------CHHHHHHHHHHHHH
4450 T ss_pred HHHHHHHHHHHHhc------CCc--------------HHHHHHH-hcChHHHHHHHhcCC------CHHHHHHHHHHHHH
4451 Confidence 44444433322110 000 0011111 123444554444321 22333344444444
4452
4453
4454 Q NP_000290.2 482 LSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKK 561 (747)
4455 Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d 561 (747)
4456 +...- ......+.+.++++.|+.++. ..+
4457 T Consensus 373 l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~ 401 (671)
4458 T 6SA8_A 373 IASGG--------------------------------------------------NEQIQAVIDAGALPALVQLLS-SPN 401 (671)
4459 T ss_dssp HTTSC--------------------------------------------------HHHHHHHHHTTHHHHHHHGGG-CSC
4460 T ss_pred HHcCC--------------------------------------------------cHHHHHHHHcCcHHHHHHHhc-CCC
4461 Confidence 43200 001112245567888888887 467
4462
4463
4464 Q NP_000290.2 562 DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL-L-HRVMGNQVFPE 639 (747)
4465 Q Consensus 562 ~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e-~-~~ll~~giI~~ 639 (747)
4466 +.++..++.+|.+++..... ....+.+.++++.|+.++.+.++.++..++.+|.+++.... . ..+...++++.
4467 T Consensus 402 ~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~ 476 (671)
4468 T 6SA8_A 402 EQILQEALWALSNIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPA 476 (671)
4469 T ss_dssp HHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHH
4470 T ss_pred HHHHHHHHHHHHhhcCCCHH-----HHHHHHhcCcHHHHHHHcCCCCHHHHHHHHHHHHHHHcCChHHHHHHHhcCcHHH
4471 Confidence 78888999999999875332 23333456788899999988888999999999999996632 2 23345667888
4472
4473
4474 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINL 691 (747)
4475 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~L 691 (747)
4476 |..++.+ .++.++..++.+|.+|+...+.....+...+.++.++..
4477 T Consensus 477 l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~ll~~ 522 (671)
4478 T 6SA8_A 477 LVQLLSS------PNEQIQDEAEKTLLNIANGSEEQQKAVYDAGALKYLLII 522 (671)
4479 T ss_dssp HHHHTTC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHH
4480 T ss_pred HHHHhhC------CCHHHHHHHHHHHHHHHcCCHHHHHHHhcccHHHHHHHH
4481 Confidence 8888876 367889999999999987655555555555555555544
4482
4483
4484 No 40
4485 >4RXH_B Importin subunit alpha, Large T; ARM repeat, NLS, nuclear import; 1.7553A {Neurospora crassa}
4486 Probab=98.05 E-value=1.2e-09 Score=113.39 Aligned_cols=157 Identities=18% Similarity=0.227 Sum_probs=116.8 Template_Neff=12.500
4487
4488 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
4489 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
4490 ..++++.++.++. +.++.++..++.+|.+++..... ....+...++++.+..++.+.++.++..++.+|.+++.
4491 T Consensus 196 ~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~ 269 (495)
4492 T 4RXH_B 196 IAPALPVLAKLVY-SLDDEVLIDACWAISYLSDGSND-----KIQAVIEAGIPRRLVELLMHASTSVQTPALRSVGNIVT 269 (495)
4493 T ss_dssp HTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTSSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
4494 T ss_pred hcCHHHHHHHHhh-CCCHHHHHHHHHHHHHHhcCCHH-----HHHHHHHCChHHHHHHHHhcCCccHHHHHHHHHHHHhc
4495 Confidence 3456777888887 46778888999999998864332 22333455788888888888888899999999999987
4496
4497
4498 Q NP_000290.2 625 HP-LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
4499 Q Consensus 625 ~~-e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
4500 .. .. ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.|..++.+. ++.++.
4501 T Consensus 270 ~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~ 342 (495)
4502 T 4RXH_B 270 GDDVQTQVIINCGALPCLLSLLSS------NKDGIRKEACWTISNITAGNSAQIQSVIDANIIPPLIHLLSHA-DLKTRK 342 (495)
4503 T ss_dssp SCHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHSS-CHHHHH
4504 T ss_pred CCHHHHHHHHhCCHHHHHHHHHhC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHhcC-CHHHHH
4505 Confidence 63 22 233445677888888876 3678899999999999876554444555556788888888766 778899
4506
4507
4508 Q NP_000290.2 703 AARLLLSDMWSS 714 (747)
4509 Q Consensus 703 aAL~aLsnL~~~ 714 (747)
4510 .++.+|.+++..
4511 T Consensus 343 ~a~~~l~~l~~~ 354 (495)
4512 T 4RXH_B 343 EACWAISNATSG 354 (495)
4513 T ss_dssp HHHHHHHHTTTT
4514 T ss_pred HHHHHHHHHHhc
4515 Confidence 999999998876
4516
4517
4518 No 41
4519 >5XJG_A Vacuolar protein 8, Nucleus-vacuole junction; Vac8p, Nvj1p, Membrane contact site; HET: B3P, PE5; 2.4A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
4520 Probab=98.04 E-value=1.3e-09 Score=111.79 Aligned_cols=133 Identities=20% Similarity=0.248 Sum_probs=82.5 Template_Neff=13.100
4521
4522 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
4523 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
4524 +++.+...+.+.++.++..++.++..+.... .....+...++++.+...+.+.+..++..++.++..++..........
4525 T Consensus 159 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 237 (506)
4526 T 5XJG_A 159 ALIPLTKLAKSKHIRVQRNATGALLNMTHSE-ENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLA 237 (506)
4527 T ss_dssp THHHHHHHTTCSSHHHHHHHHHHHHHTCSSH-HHHHHHHHHTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSHHHHHHHH
4528 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHcCCH-HHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHHHHHHHH
4529 Confidence 4555666666667788888899988887542 222233334567777777777777888888998888875433221111
4530
4531
4532 Q NP_000290.2 326 -RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVI 380 (747)
4533 Q Consensus 326 -l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~ 380 (747)
4534 ...++++.+...+. ..++.++..++.++..++........+.. ++++.+..++.
4535 T Consensus 238 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~ 293 (506)
4536 T 5XJG_A 238 QTEPRLVSKLVSLMD-SPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQ 293 (506)
4537 T ss_dssp HHCTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHT
4538 T ss_pred hhChhHHHHHHHHcc-CCCHHHHHHHHHHHHHHhCCChhHHHHHHcCcHHHHHHHHh
4539 Confidence 11235666677775 45667788888888888765433333332 45555555554
4540
4541
4542 No 42
4543 >6KBM_A Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 2.902A {Saccharomyces cerevisiae}
4544 Probab=98.04 E-value=1.3e-09 Score=111.79 Aligned_cols=133 Identities=20% Similarity=0.248 Sum_probs=82.5 Template_Neff=13.100
4545
4546 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
4547 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
4548 +++.+...+.+.++.++..++.++..+.... .....+...++++.+...+.+.+..++..++.++..++..........
4549 T Consensus 159 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 237 (506)
4550 T 6KBM_A 159 ALIPLTKLAKSKHIRVQRNATGALLNMTHSE-ENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLA 237 (506)
4551 T ss_dssp THHHHHHHTTCSSHHHHHHHHHHHHHTCSSH-HHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSHHHHHHHH
4552 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHcCCH-HHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHHHHHHHH
4553 Confidence 4555666666667788888899988887542 222233334567777777777777888888998888875433221111
4554
4555
4556 Q NP_000290.2 326 -RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVI 380 (747)
4557 Q Consensus 326 -l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~ 380 (747)
4558 ...++++.+...+. ..++.++..++.++..++........+.. ++++.+..++.
4559 T Consensus 238 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~ 293 (506)
4560 T 6KBM_A 238 QTEPRLVSKLVSLMD-SPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQ 293 (506)
4561 T ss_dssp HHCTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHHTSHHHHHHHHHTTCHHHHHHHHT
4562 T ss_pred hhChhHHHHHHHHcc-CCCHHHHHHHHHHHHHHhCCChhHHHHHHcCcHHHHHHHHh
4563 Confidence 11235666677775 45667788888888888765433333332 45555555554
4564
4565
4566 No 43
4567 >4TNM_A Importin-alpha3 / MOS6; armadillo repeat; 2.9A {Arabidopsis thaliana}
4568 Probab=97.99 E-value=2e-09 Score=113.28 Aligned_cols=158 Identities=18% Similarity=0.255 Sum_probs=115.7 Template_Neff=12.300
4569
4570 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
4571 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
4572 ..++++.|+.++. +.++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.
4573 T Consensus 243 ~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~ 316 (531)
4574 T 4TNM_A 243 TQPALPVLERLVQ-SMDEEVLTDACWALSYLSDNSND-----KIQAVIEAGVVPRLIQLLGHSSPSVLIPALRTIGNIVT 316 (531)
4575 T ss_pred hcchHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCCHH-----HHHHHHHCChHHHHHHHHhCCCHHHHHHHHHHHHHHHC
4576 Confidence 3456777777777 46777888999999998865332 22333456788889999988888899999999999987
4577
4578
4579 Q NP_000290.2 625 HPLL--HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
4580 Q Consensus 625 ~~e~--~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
4581 .... ......++++.+..++... .++.++..++.+|.+++...+.....+...++++.|+.++.+. ++.++.
4582 T Consensus 317 ~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~ 390 (531)
4583 T 4TNM_A 317 GDDLQTQMVLDQQALPCLLNLLKNN-----YKKSIKKEACWTISNITAGNADQIQAVIDAGIIQSLVWVLQSA-EFEVKK 390 (531)
4584 T ss_pred CCHHHHHHHHHCCcHHHHHHHhcCC-----CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHhcCC-CHHHHH
4585 Confidence 6322 2333446777888877652 2567888999999999876545555555666788888888765 778888
4586
4587
4588 Q NP_000290.2 703 AARLLLSDMWSS 714 (747)
4589 Q Consensus 703 aAL~aLsnL~~~ 714 (747)
4590 .++.+|.+++..
4591 T Consensus 391 ~a~~~l~~l~~~ 402 (531)
4592 T 4TNM_A 391 EAAWGISNATSG 402 (531)
4593 T ss_pred HHHHHHHHHHcC
4594 Confidence 899999888864
4595
4596
4597 No 44
4598 >6KBN_A Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 3.2A {Saccharomyces cerevisiae}
4599 Probab=97.98 E-value=2.1e-09 Score=112.87 Aligned_cols=133 Identities=20% Similarity=0.248 Sum_probs=86.0 Template_Neff=12.700
4600
4601 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
4602 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
4603 +++.+...+.+.++.++..++.++..+.... .....+...++++.+...+.+.+..++..++.++..++..........
4604 T Consensus 153 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 231 (563)
4605 T 6KBN_A 153 ALIPLTKLAKSKHIRVQRNATGALLNMTHSE-ENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLA 231 (563)
4606 T ss_dssp THHHHHHHTTCSSHHHHHHHHHHHHHTTSSH-HHHHHHHTTTCHHHHHHHTTCSSHHHHHHHHHHHHHHTTSHHHHHHHH
4607 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHhCCH-HHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCHHHHHHHH
4608 Confidence 4555666666667788888999998887542 222233334577777777777777888899999988876433221111
4609
4610
4611 Q NP_000290.2 326 -RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVI 380 (747)
4612 Q Consensus 326 -l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~ 380 (747)
4613 ...++++.+...+. ..++.++..++.++..++........+.. ++++.+..++.
4614 T Consensus 232 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~ 287 (563)
4615 T 6KBN_A 232 QTEPRLVSKLVSLMD-SPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQ 287 (563)
4616 T ss_dssp HHCSSHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHHT
4617 T ss_pred hhchhHHHHHHHHhc-CCCHHHHHHHHHHHHHHhCChhHHHHHHHCCcHHHHHHHHh
4618 Confidence 11236667777775 55677888899999988875443333333 56677776664
4619
4620
4621 No 45
4622 >6KBN_C Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 3.2A {Saccharomyces cerevisiae}
4623 Probab=97.98 E-value=2.1e-09 Score=112.87 Aligned_cols=133 Identities=20% Similarity=0.248 Sum_probs=86.0 Template_Neff=12.700
4624
4625 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
4626 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
4627 +++.+...+.+.++.++..++.++..+.... .....+...++++.+...+.+.+..++..++.++..++..........
4628 T Consensus 153 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 231 (563)
4629 T 6KBN_C 153 ALIPLTKLAKSKHIRVQRNATGALLNMTHSE-ENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLA 231 (563)
4630 T ss_dssp CHHHHHHHTTSSSHHHHHHHHHHHHHHTSSH-HHHHHHHTTTCHHHHHHHTTCSSHHHHHHHHHHHHHHTTSHHHHHHHH
4631 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHhCCH-HHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCHHHHHHHH
4632 Confidence 4555666666667788888999998887542 222233334577777777777777888899999988876433221111
4633
4634
4635 Q NP_000290.2 326 -RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVI 380 (747)
4636 Q Consensus 326 -l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~ 380 (747)
4637 ...++++.+...+. ..++.++..++.++..++........+.. ++++.+..++.
4638 T Consensus 232 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~ 287 (563)
4639 T 6KBN_C 232 QTEPRLVSKLVSLMD-SPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQ 287 (563)
4640 T ss_dssp HSSTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTT
4641 T ss_pred hhchhHHHHHHHHhc-CCCHHHHHHHHHHHHHHhCChhHHHHHHHCCcHHHHHHHHh
4642 Confidence 11236667777775 55677888899999988875443333333 56677776664
4643
4644
4645 No 46
4646 >4EV8_A Catenin beta-1; mouse catenin, CELL ADHESION; HET: URE; 1.9A {Mus musculus}
4647 Probab=97.98 E-value=2.1e-09 Score=111.06 Aligned_cols=323 Identities=18% Similarity=0.194 Sum_probs=192.8 Template_Neff=13.100
4648
4649 Q NP_000290.2 286 LGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRR-QNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELK 364 (747)
4650 Q Consensus 286 ~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~-~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~ 364 (747)
4651 .++++.+...+.+.++.++..++.++..+....... ..+.. .+++..+...+....++.++..++.++..++......
4652 T Consensus 17 ~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~ 95 (538)
4653 T 4EV8_A 17 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASR-HAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGL 95 (538)
4654 T ss_pred cCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCChhhH-HHHHhCCChHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHH
4655 Confidence 356677777777777888888999998887643322 12222 2466677776653446678888999999887654433
4656
4657
4658 Q NP_000290.2 365 EELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQT 443 (747)
4659 Q Consensus 365 ~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (747)
4660 ..+.. ++++.|+.++..+ ++++...+..+|..-... . +..++.
4661 T Consensus 96 ~~~~~~~~~~~l~~~l~~~----------------~~~~~~~a~~~l~~l~~~------~--------------~~~~~~ 139 (538)
4662 T 4EV8_A 96 LAIFKSGGIPALVKMLGSP----------------VDSVLFYAITTLHNLLLH------Q--------------EGAKMA 139 (538)
4663 T ss_pred HHHHHCCcHHHHHHHhCCC----------------CHHHHHHHHHHHHHHhCC------C--------------HHHHHH
4664 Confidence 33333 6777777776532 344444444333221100 0 000000
4665
4666
4667 Q NP_000290.2 444 MRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMN 523 (747)
4668 Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (747)
4669 . .-.+++..|...++. -+..-...+...|.++...
4670 T Consensus 140 ~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~-------------------------------------- 174 (538)
4671 T 4EV8_A 140 V-RLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYG-------------------------------------- 174 (538)
4672 T ss_pred H-HHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHhcC--------------------------------------
4673 Confidence 0 012444444444332 0112222222233332210
4674
4675
4676 Q NP_000290.2 524 NNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARL 603 (747)
4677 Q Consensus 524 ~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~L 603 (747)
4678 +......+.+.++++.|+.++....+..++..++.+|.+++..... ...+...++++.+..+
4679 T Consensus 175 ------------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~ 236 (538)
4680 T 4EV8_A 175 ------------NQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSN------KPAIVEAGGMQALGLH 236 (538)
4681 T ss_pred ------------CHHHHHHHHHCChHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHH------HHHHHHCCcHHHHHHH
4682 Confidence 0011112245667888888887423667788899999988865321 2333456788889999
4683
4684
4685 Q NP_000290.2 604 LQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSS 683 (747)
4686 Q Consensus 604 L~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~g 683 (747)
4687 +.+.++.++..++.+|.+++......... .++++.+..++.+ .++.++..++.+|.+++...+.....+...+
4688 T Consensus 237 l~~~~~~~~~~a~~~l~~l~~~~~~~~~~-~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~ 309 (538)
4689 T 4EV8_A 237 LTDPSQRLVQNCLWTLRNLSDAATKQEGM-EGLLGTLVQLLGS------DDINVVTCAAGILSNLTCNNYKNKMMVCQVG 309 (538)
4690 T ss_pred hcCCCHHHHHHHHHHHHHHHcCCCchHHH-cCcHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCC
4691 Confidence 98888889999999999998763221111 3466777777765 3678888999999999765555555555666
4692
4693
4694 Q NP_000290.2 684 MLNNIINLCR--SSASPKAAEAARLLLSDMWSSKE 716 (747)
4695 Q Consensus 684 iL~~Ll~LL~--s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
4696 .++.++..+. .. ++.++..++.+|.+++...+
4697 T Consensus 310 ~~~~l~~~l~~~~~-~~~~~~~a~~~l~~l~~~~~ 343 (538)
4698 T 4EV8_A 310 GIEALVRTVLRAGD-REDITEPAICALRHLTSRHQ 343 (538)
4699 T ss_pred cHHHHHHHHhcCCC-CHHHHHHHHHHHHHHHcCCC
4700 Confidence 7777777665 23 56677788888888876554
4701
4702
4703 No 47
4704 >4BPL_A IMPORTIN SUBUNIT ALPHA-1A, NUCLEOPLASMIN NLS; TRANSPORT PROTEIN, NUCLEAR IMPORT, NUCLEAR; 2.3A {ORYZA SATIVA}
4705 Probab=97.98 E-value=2.2e-09 Score=108.63 Aligned_cols=158 Identities=18% Similarity=0.251 Sum_probs=116.0 Template_Neff=13.000
4706
4707 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
4708 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
4709 ..++++.|+.++. +.++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.
4710 T Consensus 168 ~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~ 241 (454)
4711 T 4BPL_A 168 TRPALPALARLIH-SNDEEVLTDACWALSYLSDGTND-----KIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVT 241 (454)
4712 T ss_dssp HTTHHHHHHHHTT-CCCHHHHHHHHHHHHHHTSSCHH-----HHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTT
4713 T ss_pred HHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhcCChH-----HHHHHHHCCcHHHHHHHhhCCChHHHHHHHHHHHHHhc
4714 Confidence 3456777777777 46777888899999998865332 22333455788888898888888899999999999987
4715
4716
4717 Q NP_000290.2 625 HPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
4718 Q Consensus 625 ~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
4719 ... . ..+...++++.+..++... .++.++..++.+|.+++...+.....+...++++.|..++.+. ++.++.
4720 T Consensus 242 ~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~ 315 (454)
4721 T 4BPL_A 242 GDDAQTQCIIDHQALPCLLSLLTQN-----LKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTA-EFDIKK 315 (454)
4722 T ss_dssp SCHHHHHHHHTTTHHHHHHHHHHSS-----CCHHHHHHHHHHHHHHHTSCHHHHHHHHHHTCHHHHHHHHHHS-CHHHHH
4723 T ss_pred CCHHHHHHHHHCChHHHHHHHHHhc-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCcHHHHHHHhhcC-CHHHHH
4724 Confidence 632 2 2334456777888887652 2577889999999999876555555555666788888888766 778888
4725
4726
4727 Q NP_000290.2 703 AARLLLSDMWSS 714 (747)
4728 Q Consensus 703 aAL~aLsnL~~~ 714 (747)
4729 .++.+|.+++..
4730 T Consensus 316 ~a~~~l~~l~~~ 327 (454)
4731 T 4BPL_A 316 EAAWAISNATSG 327 (454)
4732 T ss_dssp HHHHHHHHHHHH
4733 T ss_pred HHHHHHHHHHcC
4734 Confidence 899999888863
4735
4736
4737 No 48
4738 >4PLS_B Arm00010; PEPTIDE BINDING PROTEIN, designed armadillo; HET: CA; 2.35A {synthetic construct}
4739 Probab=97.96 E-value=2.5e-09 Score=100.09 Aligned_cols=112 Identities=25% Similarity=0.272 Sum_probs=72.2 Template_Neff=13.200
4740
4741 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
4742 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
4743 ++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++.........+.
4744 T Consensus 3 i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~ 82 (281)
4745 T 4PLS_B 3 LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVI 82 (281)
4746 T ss_dssp HHHHHHTTTCSCHHHHHHHHHHHHHHHTCSHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
4747 T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHH
4748 Confidence 34556666667778888899999888765444333444455777777877777778888888888888754333222333
4749
4750
4751 Q NP_000290.2 327 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
4752 Q Consensus 327 ~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
4753 ..++++.+...+. +.++.++..++.++..++.
4754 T Consensus 83 ~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~ 114 (281)
4755 T 4PLS_B 83 DAGALPALVQLLS-SPNEQILQEALWTLGNIAS 114 (281)
4756 T ss_dssp HTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHTT
4757 T ss_pred hCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHhc
4758 Confidence 3345566666665 4455666666666666654
4759
4760
4761 No 49
4762 >5Z8H_A Adenomatous polyposis coli protein, Peptide; APC, inhibitor, PROTEIN BINDING-INHIBITOR complex; HET: PHQ, GOL; 1.79A {Homo sapiens}
4763 Probab=97.95 E-value=2.6e-09 Score=104.87 Aligned_cols=123 Identities=24% Similarity=0.347 Sum_probs=80.3 Template_Neff=12.500
4764
4765 Q NP_000290.2 258 DEKYQAIGAYYIQHTCFQDESAKQQVYQ-LGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKLETRRQNGIREAV 335 (747)
4766 Q Consensus 258 d~eVr~sAL~aLsnLs~~~~~~~~~li~-~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~~ll~~~IL~~Ll 335 (747)
4767 ++.++..++.++.+++...+.....+.. .++++.+..++...++.++..++.++.+++.. .......+...++++.+.
4768 T Consensus 92 ~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~ 171 (339)
4769 T 5Z8H_A 92 SITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALM 171 (339)
4770 T ss_pred CHHHHHHHHHHHHHHcCCCHHHHHHHHHhcChHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCCHHHHHHHHHCCcHHHHH
4771 Confidence 6778888999999887644443333444 46778888888777788889999999998864 222223333456777777
4772
4773
4774 Q NP_000290.2 336 SLLRRTGNAEIQKQLTGLLWNLSS-TDELKEELIA--DALPVLADRVI 380 (747)
4775 Q Consensus 336 ~lL~ss~d~eVr~~AL~aLsnLas-~~~~~~~Lve--giLe~Lv~LL~ 380 (747)
4776 ..+....++.++..++.++.+++. .......+.. ++++.++.++.
4777 T Consensus 172 ~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 219 (339)
4778 T 5Z8H_A 172 ECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLT 219 (339)
4779 T ss_pred HHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHhcChHHHHHHHhc
4780 Confidence 777622466778888888888876 3333323322 45555555554
4781
4782
4783 No 50
4784 >2Z6H_A Catenin beta-1; Beta-Catenin, C-terminal Domain, Activator, Cell; 2.2A {Homo sapiens}
4785 Probab=97.95 E-value=2.8e-09 Score=116.50 Aligned_cols=415 Identities=18% Similarity=0.223 Sum_probs=234.1 Template_Neff=11.700
4786
4787 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
4788 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
4789 ++..+...+. ..+..++..++.+|..++.... ....+...++++.+...+.+.+..++..++.++..++.........
4790 T Consensus 57 ~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~-~~~~~~~~~~i~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 135 (644)
4791 T 2Z6H_A 57 MVSAIVRTMQNTNDVETARCTAGTLHNLSHHRE-GLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 135 (644)
4792 T ss_pred hHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCHH-HHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
4793 Confidence 4455555555 4566778888888888865432 2223334567778888887777888899999999888654333333
4794
4795
4796 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
4797 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
4798 +...++++.+...+. ..+..++..++.++..++.... ....+.. ++++.|+.++... .++++
4799 T Consensus 136 ~~~~~~~~~L~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~---------------~~~~~ 199 (644)
4800 T 2Z6H_A 136 VRLAGGLQKMVALLN-KTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTY---------------TYEKL 199 (644)
4801 T ss_pred HHHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCC---------------CCHHH
4802 Confidence 333467777877776 5567888889999999886432 2223333 6777777777642 12233
4803
4804
4805 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
4806 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
4807 ...+..++..-.. .+..+..+ ...+.++.|...+.. .+....++++..|.++
4808 T Consensus 200 ~~~a~~~L~~l~~---------------------~~~~~~~~-~~~~~l~~l~~~l~~------~~~~~~~~a~~~L~~l 251 (644)
4809 T 2Z6H_A 200 LWTTSRVLKVLSV---------------------CSSNKPAI-VEAGGMQALGLHLTD------PSQRLVQNCLWTLRNL 251 (644)
4810 T ss_pred HHHHHHHHHHHcc---------------------ChHHHHHH-HHCCHHHHHHHHhcC------CCHHHHHHHHHHHHHH
4811 Confidence 3333333321100 00000000 012334444333321 1334445566666666
4812
4813
4814 Q NP_000290.2 483 SYRLDAE------VPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLM 556 (747)
4815 Q Consensus 483 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL 556 (747)
4816 ....... ++.-...+.. .+.-.......++.+ ....+......+.+.++++.|+..+
4817 T Consensus 252 ~~~~~~~~~~~~~~~~l~~~l~~--~~~~v~~~a~~~L~~---------------l~~~~~~~~~~~~~~~~l~~L~~~l 314 (644)
4818 T 2Z6H_A 252 SDAATKQEGMEGLLGTLVQLLGS--DDINVVTCAAGILSN---------------LTCNNYKNKMMVCQVGGIEALVRTV 314 (644)
4819 T ss_pred hcCCCCHHHHCchHHHHHHHhcC--CCHHHHHHHHHHHHH---------------HhCCCHHHHHHHHhCCHHHHHHHHH
4820 Confidence 5432210 0000000000 000000001111111 0011112223345667888888877
4821
4822
4823 Q NP_000290.2 557 GK-SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHPLL-HRVMG 633 (747)
4824 Q Consensus 557 ~s-s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~e~-~~ll~ 633 (747)
4825 .. ..++.++..++.+|.+++..... .......+...++++.|+.++.+. +..++..++.+|.+++..... ..+..
4826 T Consensus 315 ~~~~~~~~v~~~a~~~L~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~l~~ 392 (644)
4827 T 2Z6H_A 315 LRAGDREDITEPAICALRHLTSRHQE--AEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLRE 392 (644)
4828 T ss_pred hcCCCCHHHHHHHHHHHHHHHcCCCC--HHHHHHHHHHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCHHHHHHHHH
4829 Confidence 52 14567788899999999875331 000012223457788888888765 678889999999999876433 23344
4830
4831
4832 Q NP_000290.2 634 NQVFPEVTRLLTSHTGN----------------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSAS 697 (747)
4833 Q Consensus 634 ~giI~~Ll~LL~s~s~~----------------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d 697 (747)
4834 .++++.|+.++...... ......++..++.+|.+++... .....+...++++.|+.++.+. +
4835 T Consensus 393 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~L~~l~~~~-~~~~~~~~~~~i~~l~~~l~~~-~ 470 (644)
4836 T 2Z6H_A 393 QGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDV-HNRIVIRGLNTIPLFVQLLYSP-I 470 (644)
4837 T ss_pred CCcHHHHHHHHccCCHHHHHHHhcCCchhhhhcCCCCHHHHHHHHHHHHHHhcCc-chHHHHHHCCcHHHHHHHHhCC-C
4838 Confidence 56777777777652100 0002347788999999998753 3334444556788888888776 7
4839
4840
4841 Q NP_000290.2 698 PKAAEAARLLLSDMWSSKELQGVLRQQGF 726 (747)
4842 Q Consensus 698 ~eVr~aAL~aLsnL~~~~~~~~~~~~~~~ 726 (747)
4843 +.++..++.+|.+++...+....+...|+
4844 T Consensus 471 ~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 499 (644)
4845 T 2Z6H_A 471 ENIQRVAAGVLCELAQDKEAAEAIEAEGA 499 (644)
4846 T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHCCc
4847 Confidence 88999999999999987766555544443
4848
4849
4850 No 51
4851 >5AEI_B DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII; DE NOVO PROTEIN, PROTEIN-PEPTIDE COMPLEX; HET: CA, ACT; 1.83A {SYNTHETIC CONSTRUCT}
4852 Probab=97.94 E-value=2.9e-09 Score=99.92 Aligned_cols=114 Identities=25% Similarity=0.274 Sum_probs=73.1 Template_Neff=13.200
4853
4854 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
4855 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
4856 +++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++.........+
4857 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 84 (286)
4858 T 5AEI_B 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 84 (286)
4859 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
4860 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
4861 Confidence 45556666666677788888999988876544333334444567777777777777888888888888875433322223
4862
4863
4864 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
4865 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
4866 ...++++.+...+. +.++.++..++.++..++..
4867 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 118 (286)
4868 T 5AEI_B 85 IDAGALPALVQLLS-SPNEQILQEALWALSNIASG 118 (286)
4869 T ss_dssp HHHTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTS
4870 T ss_pred HHcChHHHHHHHhh-CCCHHHHHHHHHHHHHHhCC
4871 Confidence 33345566666665 44556666677777666643
4872
4873
4874 No 52
4875 >4B8J_A IMPORTIN SUBUNIT ALPHA-1A; TRANSPORT PROTEIN, NUCLEAR LOCALIZATION SIGNAL; 2.001A {ORYZA SATIVA JAPONICA GROUP}
4876 Probab=97.93 E-value=3.2e-09 Score=111.25 Aligned_cols=160 Identities=20% Similarity=0.243 Sum_probs=114.5 Template_Neff=12.400
4877
4878 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
4879 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
4880 .+.++++.++..+....++.++..++.+|.+++..... .......++++.|..++.+.++.++..++.+|.+++
4881 T Consensus 199 ~~~~~l~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~ 272 (528)
4882 T 4B8J_A 199 LANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQ------PSFEQTRPALPALARLIHSNDEEVLTDACWALSYLS 272 (528)
4883 T ss_dssp HHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSC------CCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHT
4884 T ss_pred HHCCcHHHHHHHHccCCCHHHHHHHHHHHHHHhCCCCC------CCHHHHhhHHHHHHHHhcCCCHHHHHHHHHHHHHHh
4885 Confidence 34556777777765334567788899999998865321 222234578888888888888889999999999998
4886
4887
4888 Q NP_000290.2 624 RH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
4889 Q Consensus 624 ~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
4890 .. ... ..+...++++.++.++.+ .++.++..++.+|.+++...+.....+...++++.|+.++.+..+..++
4891 T Consensus 273 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~ 346 (528)
4892 T 4B8J_A 273 DGTNDKIQAVIEAGVCPRLVELLLH------PSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIK 346 (528)
4893 T ss_dssp SSCHHHHHHHHHTTCHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSCCCHHHH
4894 T ss_pred cCChHHHHHHHHCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHHhcCCCHHHH
4895 Confidence 76 222 233445677888888776 3678889999999999875454444555556788888887654356788
4896
4897
4898 Q NP_000290.2 702 EAARLLLSDMWSSK 715 (747)
4899 Q Consensus 702 ~aAL~aLsnL~~~~ 715 (747)
4900 ..++.+|.+++...
4901 T Consensus 347 ~~a~~~l~~l~~~~ 360 (528)
4902 T 4B8J_A 347 KEACWTISNITAGN 360 (528)
4903 T ss_dssp HHHHHHHHHHHTSC
4904 T ss_pred HHHHHHHHHHHcCC
4905 Confidence 89999999987543
4906
4907
4908 No 53
4909 >4R10_A Protein humpback-2, Cadherin-related hmr-1; armadillo repeat, cell adhesion, phosphorylation; HET: SEP; 2.3A {Caenorhabditis elegans}
4910 Probab=97.89 E-value=4.1e-09 Score=110.79 Aligned_cols=417 Identities=14% Similarity=0.174 Sum_probs=224.8 Template_Neff=12.700
4911
4912 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
4913 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
4914 .+++.+...+.+.++.++..++.+|..+.... .....+...++++.+...+.+.++.++..++.++..++.........
4915 T Consensus 73 ~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 151 (572)
4916 T 4R10_A 73 SFVEALMAASKSSNVNVRRNAIGALSHMSEQR-GGPLLIFRSGGLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSDSRAQ 151 (572)
4917 T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHTTST-THHHHHHHTTTHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCTHHHHH
4918 T ss_pred cHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCC-ChHHHHHhCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCHHHHHH
4919 Confidence 44566666676677788888999998887643 22233334567777777777777888899999999887544333333
4920
4921
4922 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
4923 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
4924 +...++++.+...+. ..++.++..++.++..++... .....+.. ++++.+..++... ..++++
4925 T Consensus 152 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--------------~~~~~~ 216 (572)
4926 T 4R10_A 152 ARALNAVEALTPHLH-KTNPKLLAQVADGLYFLLIDDAPSKITFLSLLGPQILVSILREY--------------SDHRKL 216 (572)
4927 T ss_dssp HHHTTHHHHHGGGGG-CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC--------------TTCHHH
4928 T ss_pred HHHCCHHHHHHHHHh-cCCHHHHHHHHHHHHHHHCCChHHHHHHHhccHHHHHHHHHHHC--------------CCCHHH
4929 Confidence 334467777777776 556788888999999887543 22223333 6777777776521 012333
4930
4931
4932 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
4933 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
4934 ...+..++..-. ..+..+..+.. .+.++.+...+... -+..-...++.+|.++
4935 T Consensus 217 ~~~a~~~l~~l~---------------------~~~~~~~~~~~-~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~~l 269 (572)
4936 T 4R10_A 217 IYTVVRCIRSLS---------------------VCPSNKPALIS-LGCLPALYVELCTA-----KDERSQTAILVAMRNL 269 (572)
4937 T ss_dssp HHHHHHHHHHHT---------------------TSTTHHHHHHH-TTHHHHHHHHHTTC-----CSHHHHHHHHHHHHHH
4938 T ss_pred HHHHHHHHHHHh---------------------cCcchHHHHHh-CCcHHHHHHHHhcC-----CCHHHHHHHHHHHHHH
4939 Confidence 333333332110 00000111110 12222222211110 1223334445555555
4940
4941
4942 Q NP_000290.2 483 SYRLDAE------VPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLM 556 (747)
4943 Q Consensus 483 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL 556 (747)
4944 ....+.. ++.-...+. ..+.........++.+- ...+......+.+.++++.|+.++
4945 T Consensus 270 ~~~~~~~~~~~~~~~~l~~~l~--~~~~~~~~~a~~~l~~l---------------~~~~~~~~~~~~~~~~~~~l~~~l 332 (572)
4946 T 4R10_A 270 SDSATNEENLTQLIIKLLEIIR--VANDGMTACACGTLSNL---------------TCNNTRNKQTVCSHGGIDALVTAI 332 (572)
4947 T ss_dssp GGGCTTCSCCHHHHHHHHHHHH--HCCHHHHHHHHHHHHHH---------------TSSCHHHHHHHHHTTHHHHHHHHH
4948 T ss_pred cCChHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHH---------------HcCCHHHHHHHHHCcHHHHHHHHH
4949 Confidence 4322110 000000000 00000001111111111 111112233345778888898888
4950
4951
4952 Q NP_000290.2 557 GK-SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMG- 633 (747)
4953 Q Consensus 557 ~s-s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~- 633 (747)
4954 .. ..++.++..++++|.+++..... ... ....+...++++.+..++.+.+..++..++.+|.+++..... ..+..
4955 T Consensus 333 ~~~~~~~~~~~~a~~~l~~l~~~~~~-~~~-~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~ 410 (572)
4956 T 4R10_A 333 RRLPEVEEVTEPALCALRHCTARHSL-AEE-AQSELRFCQAFPVILDQLETLRTPVIKAALGVIRNSALLQTNLIELTQE 410 (572)
4957 T ss_dssp HHSTTCHHHHHHHHHHHHHHTSSSTT-HHH-HHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHTSHHHHHHHHHC
4958 T ss_pred HhCCCcHHHHHHHHHHHHHhhccCCC-cHH-HHHHHhhCChHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhHHHHHHH
4959 Confidence 62 23446888999999999432110 000 122233467888889998888888999999999999876332 22222
4960
4961
4962 Q NP_000290.2 634 -----NQVFPEVTRLLTSHTG----------NTSNSEDILSSACYTVRNLMASQPQLAKQYFSS----------SMLNNI 688 (747)
4963 Q Consensus 634 -----~giI~~Ll~LL~s~s~----------~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~----------giL~~L 688 (747)
4964 .++++.+..++..... ....++.++..++.+|.+++.. +.....+... ++++.|
4965 T Consensus 411 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 489 (572)
4966 T 4R10_A 411 QTANGHTAVSLTMDILRRAITAIEENPDIAVDGVPMWGVIEGAVSALHQLANH-PAVAAACCDDIGQVGNPECPPFLDLL 489 (572)
4967 T ss_dssp CCTTCCCHHHHHHHHHHHHHHHHHHCTTCEETTEEHHHHHHHHHHHHHHHTTS-HHHHHHHHHCCCCTTCTTSCCHHHHH
4968 T ss_pred hhhCCCCcHHHHHHHHHHHHHhcccCcchhccCccHHHHHHHHHHHHHHHhCC-HHHHHHHhccccCCCCCCCccHHHHH
4969 Confidence 2344555555432000 0012356777888899988764 3333333332 567777
4970
4971
4972 Q NP_000290.2 689 INLC------RSSASPKAAEAARLLLSDMWSSKELQGVLRQQG 725 (747)
4973 Q Consensus 689 l~LL------~s~~d~eVr~aAL~aLsnL~~~~~~~~~~~~~~ 725 (747)
4974 ..++ ... ++.++..++.+|.+++...+....+...|
4975 T Consensus 490 ~~~l~~~~~~~~~-~~~v~~~a~~~l~~l~~~~~~~~~~~~~~ 531 (572)
4976 T 4R10_A 490 HRLLAHPRLGSMD-DEVLEREILGLLYQLSKRPDGARAVESTG 531 (572)
4977 T ss_dssp HHHHHSHHHHSCS-CSHHHHHHHHHHHHHTSSHHHHHHHHTTT
4978 T ss_pred HHHHhCcccCCCC-hHHHHHHHHHHHHHHhcCCchhhHHHHcC
4979 Confidence 7777 444 77899999999999998766544443333
4980
4981
4982 No 54
4983 >5XJG_A Vacuolar protein 8, Nucleus-vacuole junction; Vac8p, Nvj1p, Membrane contact site; HET: B3P, PE5; 2.4A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
4984 Probab=97.89 E-value=4.2e-09 Score=107.74 Aligned_cols=359 Identities=22% Similarity=0.262 Sum_probs=200.2 Template_Neff=13.100
4985
4986 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
4987 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
4988 +++.+...+.+.++.++..++.++..+....... ...++++.+...+.+.++.++..++.++..++..... ....
4989 T Consensus 39 ~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~----~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~-~~~~ 113 (506)
4990 T 5XJG_A 39 PLKALTTLVYSDNLNLQRSAALAFAEITEKYVRQ----VSREVLEPILILLQSQDPQIQVAACAALGNLAVNNEN-KLLI 113 (506)
4991 T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCCC----CCHHHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSHHH-HHHH
4992 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhchHHH----HhhccHHHHHHHhhCCCHHHHHHHHHHHHHHHcCchh-HHHH
4993 Confidence 4455555666666777777777777776532211 1234566666666666667777777777777654321 1222
4994
4995
4996 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
4997 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
4998 ...++++.+...+. +.++.++..++.++..++........+.. ++++.+..++... ++++-.
4999 T Consensus 114 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~~ 176 (506)
5000 T 5XJG_A 114 VEMGGLEPLINQMM-GDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSK----------------HIRVQR 176 (506)
5001 T ss_dssp HHTTTHHHHHHHHT-SSCHHHHHHHHHHHHHHTTSHHHHHHHHTTTTHHHHHHHTTCS----------------SHHHHH
5002 T ss_pred HhcCcHHHHHHHhh-CCCHHHHHHHHHHHHHHhcCcchhhHHHhcccHHHHHHHccCC----------------CHHHHH
5003 Confidence 23345666666665 45566777777777777654332222222 4555555555421 223322
5004
5005
5006 Q NP_000290.2 405 NATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSY 484 (747)
5007 Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (747)
5008 .+..++..- . .....+..+. ..+.++.+...++. .+..-...+...|.++..
5009 T Consensus 177 ~a~~~l~~l---------~------------~~~~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~ 228 (506)
5010 T 5XJG_A 177 NATGALLNM---------T------------HSEENRKELV-NAGAVPVLVSLLSS------TDPDVQYYCTTALSNIAV 228 (506)
5011 T ss_dssp HHHHHHHHT---------C------------SSHHHHHHHH-HHTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTT
5012 T ss_pred HHHHHHHHH---------c------------CCHHHHHHHH-HCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHhc
5013 Confidence 222222210 0 0000000000 02333333333221 011222223333333221
5014
5015
5016 Q NP_000290.2 485 RLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDAT 564 (747)
5017 Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eV 564 (747)
5018 ..+ . .........++++.++.++. ..++.+
5019 T Consensus 229 ~~~------------------------------------------------~-~~~~~~~~~~~~~~l~~~l~-~~~~~~ 258 (506)
5020 T 5XJG_A 229 DEA------------------------------------------------N-RKKLAQTEPRLVSKLVSLMD-SPSSRV 258 (506)
5021 T ss_dssp SHH------------------------------------------------H-HHHHHHHCTTHHHHHHHHTT-CSSHHH
5022 T ss_pred CHH------------------------------------------------H-HHHHHhhChhHHHHHHHHcc-CCCHHH
5023 Confidence 000 0 00000012346777888887 466778
5024
5025
5026 Q NP_000290.2 565 LEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRL 643 (747)
5027 Q Consensus 565 r~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~L 643 (747)
5028 +..++.+|.+++..... ...+...++++.+..++.+.++.++..++.+|.+++..... ......++++.+..+
5029 T Consensus 259 ~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~ 332 (506)
5030 T 5XJG_A 259 KCQATLALRNLASDTSY------QLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVRL 332 (506)
5031 T ss_dssp HHHHHHHHHHHTTSHHH------HHHHHHTTHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSGGGHHHHHHTTCHHHHHHG
5032 T ss_pred HHHHHHHHHHHhCCChh------HHHHHHcCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCcchHHHHHHCCcHHHHHHH
5033 Confidence 88899999998875321 22334567888888888888888999999999999876433 233445677788888
5034
5035
5036 Q NP_000290.2 644 LTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
5037 Q Consensus 644 L~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
5038 +... .++.++..++++|.+++...+.....+...++++.+..++.+. ++.++..++.++..+....+
5039 T Consensus 333 l~~~-----~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~~~~ 399 (506)
5040 T 5XJG_A 333 LDYK-----DSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKELALDS-PVSVQSEISACFAILALADV 399 (506)
5041 T ss_dssp GGCT-----TCHHHHHHHHHHHHHTSSCCHHHHHHHHTTTHHHHHHHHTTSS-CHHHHHHHHHHHHHHTTCHH
5042 T ss_pred HcCC-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHhCChhHHHHHHHhcC-CHHHHHHHHHHHHHHhccch
5043 Confidence 7652 2467888999999999875544444555556677777777655 56677777777776665443
5044
5045
5046 No 55
5047 >6KBM_A Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 2.902A {Saccharomyces cerevisiae}
5048 Probab=97.89 E-value=4.2e-09 Score=107.74 Aligned_cols=359 Identities=22% Similarity=0.262 Sum_probs=200.2 Template_Neff=13.100
5049
5050 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
5051 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
5052 +++.+...+.+.++.++..++.++..+....... ...++++.+...+.+.++.++..++.++..++..... ....
5053 T Consensus 39 ~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~----~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~-~~~~ 113 (506)
5054 T 6KBM_A 39 PLKALTTLVYSDNLNLQRSAALAFAEITEKYVRQ----VSREVLEPILILLQSQDPQIQVAACAALGNLAVNNEN-KLLI 113 (506)
5055 T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCCCC----CCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTSHHH-HHHH
5056 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhchHHH----HhhccHHHHHHHhhCCCHHHHHHHHHHHHHHHcCchh-HHHH
5057 Confidence 4455555666666777777777777776532211 1234566666666666667777777777777654321 1222
5058
5059
5060 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
5061 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
5062 ...++++.+...+. +.++.++..++.++..++........+.. ++++.+..++... ++++-.
5063 T Consensus 114 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~~ 176 (506)
5064 T 6KBM_A 114 VEMGGLEPLINQMM-GDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSK----------------HIRVQR 176 (506)
5065 T ss_dssp HHTTTHHHHHHHHT-SCCHHHHHHHHHHHHHHTTSHHHHHHHHTTTTHHHHHHHTTCS----------------SHHHHH
5066 T ss_pred HhcCcHHHHHHHhh-CCCHHHHHHHHHHHHHHhcCcchhhHHHhcccHHHHHHHccCC----------------CHHHHH
5067 Confidence 23345666666665 45566777777777777654332222222 4555555555421 223322
5068
5069
5070 Q NP_000290.2 405 NATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSY 484 (747)
5071 Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (747)
5072 .+..++..- . .....+..+. ..+.++.+...++. .+..-...+...|.++..
5073 T Consensus 177 ~a~~~l~~l---------~------------~~~~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~ 228 (506)
5074 T 6KBM_A 177 NATGALLNM---------T------------HSEENRKELV-NAGAVPVLVSLLSS------TDPDVQYYCTTALSNIAV 228 (506)
5075 T ss_dssp HHHHHHHHT---------C------------SSHHHHHHHH-HTTCHHHHHHGGGC------SCHHHHHHHHHHHHHHTT
5076 T ss_pred HHHHHHHHH---------c------------CCHHHHHHHH-HCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHhc
5077 Confidence 222222210 0 0000000000 02333333333221 011222223333333221
5078
5079
5080 Q NP_000290.2 485 RLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDAT 564 (747)
5081 Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eV 564 (747)
5082 ..+ . .........++++.++.++. ..++.+
5083 T Consensus 229 ~~~------------------------------------------------~-~~~~~~~~~~~~~~l~~~l~-~~~~~~ 258 (506)
5084 T 6KBM_A 229 DEA------------------------------------------------N-RKKLAQTEPRLVSKLVSLMD-SPSSRV 258 (506)
5085 T ss_dssp SHH------------------------------------------------H-HHHHHHHCTTHHHHHHHHTT-CSSHHH
5086 T ss_pred CHH------------------------------------------------H-HHHHHhhChhHHHHHHHHcc-CCCHHH
5087 Confidence 000 0 00000012346777888887 466778
5088
5089
5090 Q NP_000290.2 565 LEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRL 643 (747)
5091 Q Consensus 565 r~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~L 643 (747)
5092 +..++.+|.+++..... ...+...++++.+..++.+.++.++..++.+|.+++..... ......++++.+..+
5093 T Consensus 259 ~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~ 332 (506)
5094 T 6KBM_A 259 KCQATLALRNLASDTSY------QLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVRL 332 (506)
5095 T ss_dssp HHHHHHHHHHHHTSHHH------HHHHHHTTCHHHHHHHHTSSCHHHHHHHHHHHHHHTTSGGGHHHHHHTTCHHHHHHH
5096 T ss_pred HHHHHHHHHHHhCCChh------HHHHHHcCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCcchHHHHHHCCcHHHHHHH
5097 Confidence 88899999998875321 22334567888888888888888999999999999876433 233445677788888
5098
5099
5100 Q NP_000290.2 644 LTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
5101 Q Consensus 644 L~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
5102 +... .++.++..++++|.+++...+.....+...++++.+..++.+. ++.++..++.++..+....+
5103 T Consensus 333 l~~~-----~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~~~~ 399 (506)
5104 T 6KBM_A 333 LDYK-----DSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKELALDS-PVSVQSEISACFAILALADV 399 (506)
5105 T ss_dssp TTCC-----SCHHHHHHHHHHHHHHHHHCSSTHHHHHHTTHHHHHHHHSSSS-CHHHHHHHHHHHHHHTTCHH
5106 T ss_pred HcCC-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHhCChhHHHHHHHhcC-CHHHHHHHHHHHHHHhccch
5107 Confidence 7652 2467888999999999875544444555556677777777655 56677777777776665443
5108
5109
5110 No 56
5111 >5IZA_A Adenomatous polyposis coli protein, ACE-GLY-GLY-GLU-ALA-LEU-ALA-TRP-NH2; APC, ASEF, Colon CANCER, Drug; 1.5A {Homo sapiens}
5112 Probab=97.89 E-value=4.5e-09 Score=105.07 Aligned_cols=297 Identities=19% Similarity=0.226 Sum_probs=180.6 Template_Neff=12.000
5113
5114 Q NP_000290.2 236 CSEDIECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-----------NQNVQ 304 (747)
5115 Q Consensus 236 ~~~~~~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-----------d~eVr 304 (747)
5116 |.+-++..+.........+.+.++.++..++.+|.++... ......+...++++.+..++... +..++
5117 T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 101 (354)
5118 T 5IZA_A 23 CWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFD-EEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLR 101 (354)
5119 T ss_dssp HHHHHHHCCTTCCTTTSCCCCGGGGTHHHHHHHHHHHTTS-HHHHHHHHHTTHHHHHHHHHHHHHHHHCSCCCHHHHHHH
5120 T ss_pred HHHHHHhcCCCCCCCCCCCCCCchHhHHHHHHHHHHccCC-HHHHHHHHHcCHHHHHHHHHHhhHHHhCCCCCCCCHHHH
5121 Confidence 3343444444444445556667778888899999998765 33333344456777777777643 67788
5122
5123
5124 Q NP_000290.2 305 QAAAGALRNLVFRSTTNKLETRR-QNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST--DELKEELIA-DALPVLADRVI 380 (747)
5125 Q Consensus 305 ~~AL~aLs~La~~~~~~~~~ll~-~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~--~~~~~~Lve-giLe~Lv~LL~ 380 (747)
5126 ..++.++.+++.........+.. .++++.+..++. ..++.++..++.++.+++.. ......+.. ++++.|+.++.
5127 T Consensus 102 ~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 180 (354)
5128 T 5IZA_A 102 RYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLK-SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECAL 180 (354)
5129 T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGG-CSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHH
5130 T ss_pred HHHHHHHHHHhcCCHHHHHHHHccchHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHHHHHH
5131 Confidence 88999999887644333333333 467777888886 55678888999999999874 222333444 77777877775
5132
5133
5134 Q NP_000290.2 381 IPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSA-DAGRQTMRNYSGLIDSLMAYVQ 459 (747)
5135 Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 459 (747)
5136 .. .++++...+..+|.. +... +..++.+..-.|.++.|...+.
5137 T Consensus 181 ~~---------------~~~~~~~~a~~~L~~---------------------l~~~~~~~~~~~~~~~~~~~~l~~~l~ 224 (354)
5138 T 5IZA_A 181 EV---------------KKESTLKSVLSALWN---------------------LSAHCTENKADICAVDGALAFLVGTLT 224 (354)
5139 T ss_dssp HC---------------CCHHHHHHHHHHHHH---------------------HHTTCHHHHHHHHTSTTHHHHHHHHTC
5140 T ss_pred hc---------------CCHHHHHHHHHHHHH---------------------HHcCChHhHHHHHhhccHHHHHHHHHh
5141 Confidence 42 133443333333322 1111 1122222221345555555444
5142
5143
5144 Q NP_000290.2 460 NCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKG 539 (747)
5145 Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~ 539 (747)
5146 ... ...+..-.+.+..+|.+++..+. .+...
5147 T Consensus 225 ~~~--~~~~~~~~~~~~~~L~~l~~~~~-----------------------------------------------~~~~~ 255 (354)
5148 T 5IZA_A 225 YRS--QTNTLAIIESGGGILRNVSSLIA-----------------------------------------------TNEDH 255 (354)
5149 T ss_dssp SSC--SSCCHHHHHHHHHHHHHHHHHHT-----------------------------------------------TCHHH
5150 T ss_pred hcC--CCCcHHHHHHHHHHHHHHHHHhc-----------------------------------------------CCHHH
5151 Confidence 210 11113334555556666541100 01112
5152
5153
5154 Q NP_000290.2 540 SGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLL 619 (747)
5155 Q Consensus 540 ~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aL 619 (747)
5156 ...+.+.++++.|+.++. ..++.++..++.+|.+++...+. ....+.+.++++.|+.++.+.++.++..++.+|
5157 T Consensus 256 ~~~l~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L 329 (354)
5158 T 5IZA_A 256 RQILRENNCLQTLLQHLK-SHSLTIVSNACGTLWNLSARNPK-----DQEALWDMGAVSMLKNLIHSKHKMIAMGSAAAL 329 (354)
5159 T ss_dssp HHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTSSCHH-----HHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHH
5160 T ss_pred HHHHHHCCHHHHHHHHhh-cCCHHHHHHHHHHHHHHHccCHH-----HHHHHHhCCHHHHHHHHHhccCHHHHHHHHHHH
5161 Confidence 223356678888988887 46777888999999999874332 233445678899999999888888999999999
5162
5163
5164 Q NP_000290.2 620 SNMSRH 625 (747)
5165 Q Consensus 620 snLa~~ 625 (747)
5166 .+++..
5167 T Consensus 330 ~~l~~~ 335 (354)
5168 T 5IZA_A 330 RNLMAN 335 (354)
5169 T ss_dssp HHHHHT
5170 T ss_pred HHHHcc
5171 Confidence 999876
5172
5173
5174 No 57
5175 >4R0Z_A Protein humpback-2; armadillo repeat, cell adhesion; 2.005A {Caenorhabditis elegans}
5176 Probab=97.86 E-value=5.4e-09 Score=112.30 Aligned_cols=401 Identities=14% Similarity=0.143 Sum_probs=217.2 Template_Neff=12.300
5177
5178 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
5179 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
5180 +++.+...+.+.+..++..++.++.+++.........+...++++.+..++...+..++..++.++..++.........+
5181 T Consensus 115 ~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 194 (629)
5182 T 4R0Z_A 115 GLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSDSRAQARALNAVEALTPHLHKTNPKLLAQVADGLYFLLIDDAPSKITF 194 (629)
5183 T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHTTHHHHHGGGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHH
5184 T ss_pred cHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCHHHHHHHHHhccCHHHHHHHHHHHHHHhCCCHHHHHHH
5185 Confidence 45556666666677888889999998866543333344445677888888877778888999999999875544333334
5186
5187
5188 Q NP_000290.2 326 RRQNGIREAVSLLRR-TGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
5189 Q Consensus 326 l~~~IL~~Ll~lL~s-s~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
5190 ...+++..+..++.. ..+..++..++.++..++........+.. +++..++..+... .++++.
5191 T Consensus 195 ~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~~~~~ 259 (629)
5192 T 4R0Z_A 195 LSLLGPQILVSILREYSDHRKLIYTVVRCIRSLSVCPSNKPALISLGCLPALYVELCTA---------------KDERSQ 259 (629)
5193 T ss_dssp HHTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHHHHHHC---------------CCHHHH
5194 T ss_pred HHccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCcchHHHHHHCChHHHHHHHHHhC---------------CCHHHH
5195 Confidence 444567777777651 23456777888888888765443333333 5555554444321 123333
5196
5197
5198 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
5199 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
5200 ..+..++..-..- +..++.+ .+++..+...+.. -+......+...|.++.
5201 T Consensus 260 ~~a~~~l~~l~~~---------------------~~~~~~~---~~~i~~l~~~l~~------~~~~~~~~a~~~l~~l~ 309 (629)
5202 T 4R0Z_A 260 TAILVAMRNLSDS---------------------ATNEENL---TQLIIKLLEIIRV------ANDGMTACACGTLSNLT 309 (629)
5203 T ss_dssp HHHHHHHHHHGGG---------------------CCTTSCC---HHHHHHHHHHTTT------CCHHHHHHHHHHHHHHH
5204 T ss_pred HHHHHHHHHHcCC---------------------cchHHHH---HHHHHHHHHHHhc------CCHHHHHHHHHHHHHHH
5205 Confidence 3333333221110 0001111 1123333322211 12222333444444444
5206
5207
5208 Q NP_000290.2 484 YRLDAEVP---------TRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLN 554 (747)
5209 Q Consensus 484 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~ 554 (747)
5210 ..-+.... .-..-+.....+.........+..+-... ..........+.+.++++.|+.
5211 T Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~------------~~~~~~~~~~~~~~~~~~~l~~ 377 (629)
5212 T 4R0Z_A 310 CNNTRNKQTVCSHGGIDALVTAIRRLPEVEEVTEPALCALRHCTAR------------HSLAEEAQSELRFCQAFPVILD 377 (629)
5213 T ss_dssp TTCHHHHHHHHHTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTSS------------STTHHHHHHHHHHTTCHHHHHH
5214 T ss_pred cCCHHHHHHHHHCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHhccc------------CCCcHHHHHHHhhcChHHHHHH
5215 Confidence 22111000 00000000000000000011111110000 0001111222345677888888
5216
5217
5218 Q NP_000290.2 555 LMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK------EKGLPQIARLLQS----------------GNSDVV 612 (747)
5219 Q Consensus 555 LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie------~giI~~Ll~LL~s----------------~d~eVr 612 (747)
5220 ++. +.++.++..++.+|.+++..... ...+.. .+.++.+..++.. .+..++
5221 T Consensus 378 ~l~-~~~~~~~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 450 (629)
5222 T 4R0Z_A 378 QLE-TLRTPVIKAALGVIRNSALLQTN------LIELTQEQTANGHTAVSLTMDILRRAITAIEENPDIAVDGVPMWGVI 450 (629)
5223 T ss_dssp HHT-TCCHHHHHHHHHHHHHHTTSTTH------HHHHHHCCCTTCCCHHHHHHHHHHHHHHHHHHCTTCEETTEEHHHHH
5224 T ss_pred HHh-cCCHHHHHHHHHHHHHHcccchh------HHHHHhccccCCccHHHHHHHHHHHHHHhcccCCCcccCCeeHHHHH
5225 Confidence 887 46778888999999998865321 111122 3456666666643 234566
5226
5227
5228 Q NP_000290.2 613 RSGASLLSNMSRHPLL-HRVMGN----------QVFPEVTRLLT------SHTGNTSNSEDILSSACYTVRNLMASQPQL 675 (747)
5229 Q Consensus 613 ~~AL~aLsnLa~~~e~-~~ll~~----------giI~~Ll~LL~------s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~ 675 (747)
5230 ..++.+|.+++..... ..+... ++++.+..++. . .++.++..++.+|.+++.. +..
5231 T Consensus 451 ~~~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~------~~~~v~~~a~~~L~~l~~~-~~~ 523 (629)
5232 T 4R0Z_A 451 EGAVSALHQLANHPAVAAACCDDIGQVGNPECPPFLDLLHRLLAHPRLGSM------DDEVLEREILGLLYQLSKR-PDG 523 (629)
5233 T ss_dssp HHHHHHHHHHTTSHHHHHHHHHCCCCTTCTTSCCHHHHHHHHHTCHHHHTC------SCSHHHHHHHHHHHHHTSS-HHH
5234 T ss_pred HHHHHHHHHHhCCHHHHHHHhhccccCCCCCCCcHHHHHHHHhcCcccCCC------chHHHHHHHHHHHHHHhcC-CCh
5235 Confidence 7778888888765333 222222 56777777775 3 3678889999999999854 445
5236
5237
5238 Q NP_000290.2 676 AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKELQ 718 (747)
5239 Q Consensus 676 ~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~~~ 718 (747)
5240 ...+...++++.|..++.+. ++.++..++.+|.++..+....
5241 T Consensus 524 ~~~l~~~~~~~~L~~~l~~~-~~~v~~~a~~~L~~l~~~~~~~ 565 (629)
5242 T 4R0Z_A 524 ARAVESTGVSALLMESRGSQ-YKSVVTYANGVLSNLKRGDSAA 565 (629)
5243 T ss_dssp HHHHHTTTCHHHHHHHTTCS-SHHHHHHHHHHHHHHHHHHC--
5244 T ss_pred HhHHhhccHHHHHHHHhccC-ChhHHHHHHHHHhhccCCChhh
5245 Confidence 55555666788888888766 7888999999999988766553
5246
5247
5248 No 58
5249 >4R0Z_A Protein humpback-2; armadillo repeat, cell adhesion; 2.005A {Caenorhabditis elegans}
5250 Probab=97.85 E-value=5.5e-09 Score=112.24 Aligned_cols=418 Identities=14% Similarity=0.170 Sum_probs=229.8 Template_Neff=12.300
5251
5252 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
5253 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
5254 .+++.+...+.+.+..++..++.+|..+.... .....+...++++.+...+.+.+..++..++.++.+++.........
5255 T Consensus 73 ~~~~~L~~~l~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 151 (629)
5256 T 4R0Z_A 73 SFVEALMAASKSSNVNVRRNAIGALSHMSEQR-GGPLLIFRSGGLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSDSRAQ 151 (629)
5257 T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHTTST-THHHHHHHHTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCTTHHHH
5258 T ss_pred cHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCC-CchHHHHhCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHH
5259 Confidence 45566666676677888889999999887643 22233334467777888887777788889999999887544333333
5260
5261
5262 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
5263 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
5264 +...++++.+..++. ..++.++..++.++.+++... .....+.. ++++.|+.++... ..++++
5265 T Consensus 152 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--------------~~~~~~ 216 (629)
5266 T 4R0Z_A 152 ARALNAVEALTPHLH-KTNPKLLAQVADGLYFLLIDDAPSKITFLSLLGPQILVSILREY--------------SDHRKL 216 (629)
5267 T ss_dssp HHHTTHHHHHGGGGG-CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC--------------TTCHHH
5268 T ss_pred HHHCCHHHHHHHHHh-ccCHHHHHHHHHHHHHHhCCCHHHHHHHHHccHHHHHHHHHHHc--------------CCCHHH
5269 Confidence 444467777888776 556788889999999987543 22333333 6777777777621 012233
5270
5271
5272 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
5273 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
5274 ...+..+|..-.. .+..+..+.. .+.+..++..+... .+..-...++..|.++
5275 T Consensus 217 ~~~a~~~l~~l~~---------------------~~~~~~~~~~-~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~~l 269 (629)
5276 T 4R0Z_A 217 IYTVVRCIRSLSV---------------------CPSNKPALIS-LGCLPALYVELCTA-----KDERSQTAILVAMRNL 269 (629)
5277 T ss_dssp HHHHHHHHHHHTT---------------------STTHHHHHHH-TTHHHHHHHHHHHC-----CCHHHHHHHHHHHHHH
5278 T ss_pred HHHHHHHHHHHhc---------------------CcchHHHHHH-CChHHHHHHHHHhC-----CCHHHHHHHHHHHHHH
5279 Confidence 3333333322110 0001111111 12222222111110 1122334445555555
5280
5281
5282 Q NP_000290.2 483 SYRLDAE------VPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLM 556 (747)
5283 Q Consensus 483 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL 556 (747)
5284 +..-+.. ++.-...+.. .+.........++.+ ....+......+.+.++++.|+.++
5285 T Consensus 270 ~~~~~~~~~~~~~i~~l~~~l~~--~~~~~~~~a~~~l~~---------------l~~~~~~~~~~~~~~~~~~~l~~~l 332 (629)
5286 T 4R0Z_A 270 SDSATNEENLTQLIIKLLEIIRV--ANDGMTACACGTLSN---------------LTCNNTRNKQTVCSHGGIDALVTAI 332 (629)
5287 T ss_dssp GGGCCTTSCCHHHHHHHHHHTTT--CCHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHTTHHHHHHHHH
5288 T ss_pred cCCcchHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHH---------------HHcCCHHHHHHHHHCCHHHHHHHHH
5289 Confidence 4322110 0000000000 000000011111111 1111112233346778888888888
5290
5291
5292 Q NP_000290.2 557 GK-SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMG- 633 (747)
5293 Q Consensus 557 ~s-s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~- 633 (747)
5294 .. ..+..++..++.+|.+++..... ... ....+...++++.|+.++.+.++.++..++.+|.+++..... ..+..
5295 T Consensus 333 ~~~~~~~~~~~~a~~~l~~l~~~~~~-~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~ 410 (629)
5296 T 4R0Z_A 333 RRLPEVEEVTEPALCALRHCTARHSL-AEE-AQSELRFCQAFPVILDQLETLRTPVIKAALGVIRNSALLQTNLIELTQE 410 (629)
5297 T ss_dssp HHCTTCHHHHHHHHHHHHHHTSSSTT-HHH-HHHHHHHTTCHHHHHHHHTTCCHHHHHHHHHHHHHHTTSTTHHHHHHHC
5298 T ss_pred HhCCCcHHHHHHHHHHHHHhcccCCC-cHH-HHHHHhhcChHHHHHHHHhcCCHHHHHHHHHHHHHHcccchhHHHHHhc
5299 Confidence 62 13446888999999999432110 000 123334567788899999888888999999999999876322 22211
5300
5301
5302 Q NP_000290.2 634 -----NQVFPEVTRLLTSHTG----------NTSNSEDILSSACYTVRNLMASQPQLAKQYFSS----------SMLNNI 688 (747)
5303 Q Consensus 634 -----~giI~~Ll~LL~s~s~----------~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~----------giL~~L 688 (747)
5304 .++++.++.++..... ....+..++..++.+|.+++.. +.....+.+. ++++.|
5305 T Consensus 411 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 489 (629)
5306 T 4R0Z_A 411 QTANGHTAVSLTMDILRRAITAIEENPDIAVDGVPMWGVIEGAVSALHQLANH-PAVAAACCDDIGQVGNPECPPFLDLL 489 (629)
5307 T ss_dssp CCTTCCCHHHHHHHHHHHHHHHHHHCTTCEETTEEHHHHHHHHHHHHHHHTTS-HHHHHHHHHCCCCTTCTTSCCHHHHH
5308 T ss_pred cccCCccHHHHHHHHHHHHHHhcccCCCcccCCeeHHHHHHHHHHHHHHHhCC-HHHHHHHhhccccCCCCCCCcHHHHH
5309 Confidence 3455566666532000 0002345667788888888764 4444444443 567777
5310
5311
5312 Q NP_000290.2 689 INLCR------SSASPKAAEAARLLLSDMWSSKELQGVLRQQGF 726 (747)
5313 Q Consensus 689 l~LL~------s~~d~eVr~aAL~aLsnL~~~~~~~~~~~~~~~ 726 (747)
5314 ..++. +. ++.++..++.+|.+++...+....+...|.
5315 T Consensus 490 ~~~l~~~~~~~~~-~~~v~~~a~~~L~~l~~~~~~~~~l~~~~~ 532 (629)
5316 T 4R0Z_A 490 HRLLAHPRLGSMD-DEVLEREILGLLYQLSKRPDGARAVESTGV 532 (629)
5317 T ss_dssp HHHHTCHHHHTCS-CSHHHHHHHHHHHHHTSSHHHHHHHHTTTC
5318 T ss_pred HHHhcCcccCCCc-hHHHHHHHHHHHHHHhcCCChHhHHhhccH
5319 Confidence 77776 44 778899999999999977766555554444
5320
5321
5322 No 59
5323 >1XM9_A plakophilin 1 Plakophilin-1; armadillo repeat, CELL ADHESION; 2.8A {Homo sapiens} SCOP: a.118.1.24
5324 Probab=97.84 E-value=6.1e-09 Score=106.37 Aligned_cols=350 Identities=19% Similarity=0.201 Sum_probs=191.7 Template_Neff=12.600
5325
5326 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
5327 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
5328 .+++.+..++.+.++.++..++.++.+++.........+...++++.++.++. ..+..++..++.+|.+++... ....
5329 T Consensus 44 ~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~-~~~~ 122 (457)
5330 T 1XM9_A 44 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKE 122 (457)
5331 T ss_dssp THHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSS-STHH
5332 T ss_pred CHHHHHHHHhcCCCHHHHHHHHHHHHHHhhCCHHHHHHHHhcChHHHHHHHhhhCCCHHHHHHHHHHHHHHhCCH-HHHH
5333 Confidence 34566677777777888999999999988654443444445567778888876 556778888999999887632 2222
5334
5335
5336 Q NP_000290.2 324 ETRRQNGIREAVSLL----------------RRTGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVIIPFSG 385 (747)
5337 Q Consensus 324 ~ll~~~IL~~Ll~lL----------------~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~~~~~ 385 (747)
5338 .+. .++++.+..++ . ..++.++..++.++.+++........+.. ++++.|+.++......
5339 T Consensus 123 ~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 200 (457)
5340 T 1XM9_A 123 ELI-ADALPVLADRVIIPFSGWCDGNSNMSRE-VVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAA 200 (457)
5341 T ss_dssp HHH-HHHHHHCCCCCCHHHHTCC----------CCCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHH
5342 T ss_pred HHH-cchHHHHHHHhccccCCCCCCCCCcccc-cCCHHHHHHHHHHHHHHccChHHHHHHHhcccHHHHHHHHHHHhhhc
5343 Confidence 222 45677777776 3 44667888899999999876544444443 5677777777642211
5344
5345
5346 Q NP_000290.2 386 WCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLA-------LVPQR-ATSSRVNLSSAD------------------- 438 (747)
5347 Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~------------------- 438 (747)
5348 ...++++...+..+|..-....+... ..+.+ ...+.......+
5349 T Consensus 201 ----------~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (457)
5350 T 1XM9_A 201 ----------SRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEE 270 (457)
5351 T ss_dssp ----------TCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC----------------------------CCCCC
5352 T ss_pred ----------CcCCHHHHHHHHHHHHHHhcccccCCCcchhhhhhcccccccccccccccCcccchhccccccCCCCccc
5353 Confidence 11234444455544433211000000 00000 000000000000
5354
5355
5356 Q NP_000290.2 439 ---AGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFS 515 (747)
5357 Q Consensus 439 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (747)
5358 .+++.+.. .+.+..|...+... -+....+.+...|.|+...-
5359 T Consensus 271 ~~~~~~~~~~~-~~~~~~l~~~l~~~-----~~~~~~~~a~~~L~~l~~~~----------------------------- 315 (457)
5360 T 1XM9_A 271 TNPKGSGWLYH-SDAIRTYLNLMGKS-----KKDATLEACAGALQNLTASK----------------------------- 315 (457)
5361 T ss_dssp SSCCGGGGGGS-HHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHTTCS-----------------------------
5362 T ss_pred CCCchhHHhhc-hhHHHHHHHHhccC-----CCHHHHHHHHHHHHHHHhcc-----------------------------
5363 Confidence 00000000 01111111111000 00000011111111111000
5364
5365
5366 Q NP_000290.2 516 NKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEK 595 (747)
5367 Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~g 595 (747)
5368 +.... ......+.+.++++.|+.++. +.++.++..++.+|.+++.... ....+ ..+
5369 T Consensus 316 ---------------~~~~~-~~~~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~------~~~~~-~~~ 371 (457)
5370 T 1XM9_A 316 ---------------GLMSS-GMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNMSRHPL------LHRVM-GNQ 371 (457)
5371 T ss_dssp ---------------SSHHH-HHHHCCCCCSCCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSGG------GHHHH-HHH
5372 T ss_pred ---------------ccccC-CcchhhhhhcchHHHHHHHHh-cCCHHHHHHHHHHHHHHhcCHH------HHHHH-Hcc
5373 Confidence 00000 001123456778899999998 4677888999999999986432 12232 345
5374
5375
5376 Q NP_000290.2 596 GLPQIARLLQSG------NSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRN 667 (747)
5377 Q Consensus 596 iI~~Ll~LL~s~------d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsn 667 (747)
5378 +++.|+.++... ++.++..++.+|.+|+.. +.. ..+...++++.|..++... .++.++..++.+|.+
5379 T Consensus 372 ~~~~l~~~l~~~~~~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~-----~~~~v~~~a~~~L~~ 446 (457)
5380 T 1XM9_A 372 VFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS-----ASPKAAEAARLLLSD 446 (457)
5381 T ss_dssp THHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCT-----TCHHHHHHHHHHHHT
5382 T ss_pred cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHhccHHHHHHHHHhCC-----CCHHHHHHHHHHHHH
5383 Confidence 788888888765 678899999999999854 333 3445567788888887652 267888999999999
5384
5385
5386 Q NP_000290.2 668 LMAS 671 (747)
5387 Q Consensus 668 La~~ 671 (747)
5388 |+..
5389 T Consensus 447 l~~~ 450 (457)
5390 T 1XM9_A 447 MWSS 450 (457)
5391 T ss_dssp TSSS
5392 T ss_pred Hhhc
5393 Confidence 8864
5394
5395
5396 No 60
5397 >4I2Z_A Protein UNC-45, Heat shock protein; chaperone, myosin folding, protein filaments; 2.9A {Caenorhabditis elegans}
5398 Probab=97.84 E-value=7.3e-09 Score=122.51 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=41.5 Template_Neff=8.600
5399
5400 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVF 316 (747)
5401 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~ 316 (747)
5402 ++.|+.++...+..++..+..++..+... ......+...+.++.|+.++.+.++..+..++.+|..++.
5403 T Consensus 648 ~~~Lv~ll~~~s~~~r~~~~~~l~~l~~~-~~~R~~iv~~G~v~~Ll~ll~~~~~~~~~~Aa~ALa~l~~ 716 (961)
5404 T 4I2Z_A 648 VPACVAVSKTESKNALELIARSLLAFAEY-EDLRGRIIAEGGTVLCLRLTKEASGEGKIKAGHAIAKLGA 716 (961)
5405 T ss_dssp HHHHHHTCCCSCSHHHHHHHHHHHTTSCS-STTHHHHTTTTHHHHHHHHHHHSCTHHHHHHHHHHHHHSS
5406 T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHCchHHHHHHHHhcCChHHHHHHHHHHHHHHc
5407 Confidence 44555555555566677777777777643 3344445555666777777665555566666666665543
5408
5409
5410 No 61
5411 >6SWY_5 Vacuolar import and degradation protein; Suppressed, Suppreseed, LIGASE; 3.2A { Saccharomyces cerevisiae YJM1133}
5412 Probab=97.83 E-value=7.4e-09 Score=121.91 Aligned_cols=402 Identities=11% Similarity=0.070 Sum_probs=223.3 Template_Neff=8.700
5413
5414 Q NP_000290.2 240 IECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFR 317 (747)
5415 Q Consensus 240 ~~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~ 317 (747)
5416 +...+.++..+..++...+..++..++.+|..++..... ....+...++++.++.++...+ +. +..++.+|..++..
5417 T Consensus 281 l~~~~~~~~~L~~Ll~s~~~~lr~~Al~~L~~L~~~~~~~~~~~~~~~g~l~~Li~lL~~~~~~~-~~~al~~L~~L~~~ 359 (921)
5418 T 6SWY_5 281 LRNDATFKMFVLGLLKSNDVNIRCVALKFLLQPYFTEDKKWEDTRTLEKILPYLVKSFNYDPLPW-WFDPFDMLDSLIVL 359 (921)
5419 T ss_dssp STTCSHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSSSTTSCHHHHHHHHHHHHHTTSCSSCCT-TCCHHHHHHHHHHH
5420 T ss_pred hhcccchHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCchhhHHHHccHHHHHHHHcCCCCCch-hchHHHHHHHHHHH
5421 Confidence 334455566666777777788899999999998865332 1233344567888888887654 44 77888888888762
5422
5423
5424 Q NP_000290.2 318 S-------TTNKLETRRQNGIRE-AVSLLRRTG--------NAEIQKQLTGLLWNLSSTDEL-KEELIA--DALPVLADR 378 (747)
5425 Q Consensus 318 ~-------~~~~~~ll~~~IL~~-Ll~lL~ss~--------d~eVr~~AL~aLsnLas~~~~-~~~Lve--giLe~Lv~L 378 (747)
5426 . ......+...+.+.. +..++. .. +..++..++.++..++..... ...+.. ++++.|+.+
5427 T Consensus 360 ~~~~~~~~~~~~~~l~~~g~i~~lL~~ll~-~~~~~~~~~~~~~v~~~al~~L~~L~~~~e~~r~~l~~~~~~l~~L~~l 438 (921)
5428 T 6SWY_5 360 YNEITPMNNPVLTTLAHTNVIFCILSRFAQ-CLSLPQHNEATLKTTTKFIKICASFAASDEKYRLLLLNDTLLLNHLEYG 438 (921)
5429 T ss_dssp HHHHSTTCCHHHHHHHHTTHHHHHHHHHHH-HHTCSSCCHHHHHHHHHHHHHHHHHHTSCHHHHHHHHTTSSHHHHHHHH
5430 T ss_pred hcccCCCCCHHHHHHHHcChHHHHHHHHHH-hcCCccCCcCCHHHHHHHHHHHHHHhCCCHHHHHHHhccccHHHHHHHH
5431 Confidence 1 111122223455565 555554 33 566778888999888875432 232333 567777777
5432
5433
5434 Q NP_000290.2 379 VIIPF-------SGWC------DGNSNMS-REVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAG-RQT 443 (747)
5435 Q Consensus 379 L~~~~-------~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 443 (747)
5436 +.... +.|- .+....+ ....|+++...+..+|+. ++..... ++.
5437 T Consensus 439 L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~al~~L~~---------------------Ls~~~~~lr~~ 497 (921)
5438 T 6SWY_5 439 LESHITLIQDFISLKDEIKETTTESHSMCLPPIYDHDFVAAWLLLLKS---------------------FSRSVSALRTT 497 (921)
5439 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCTTCCCCCTTHHHHHHHHHHHHH---------------------HTTCHHCCCCC
5440 T ss_pred HHhhHHHHHHHHhccHHHHhcccccccCCCCCCCCHHHHHHHHHHHHH---------------------HhCCHHHHHHH
5441 Confidence 76220 0000 0000000 011124444444444432 1111111 111
5442
5443
5444 Q NP_000290.2 444 MRNYSGLIDSLMAYVQNCVA-ASRC----------DDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTG 512 (747)
5445 Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (747)
5446 +.. .|++..|...++.... ...| +..-...+...|.|++..-
5447 T Consensus 498 l~~-~g~i~~Ll~lL~~~~~~~~~~~~~~~~~~~~~~~v~~~al~aL~nL~~~~-------------------------- 550 (921)
5448 T 6SWY_5 498 LKR-NKIAQLLLQILSKTYTLTKECYFAGQDFMKPEIMIMGITLGSICNFVVEF-------------------------- 550 (921)
5449 T ss_dssp SCC-HHHHHHHHHHHHHHHHHHHHCGGGCSTTTHHHHHHHHHHHHHHHHHTSSS--------------------------
5450 T ss_pred HHH-CChHHHHHHHHHhhccchHhhhcCCcccccccHHHHHHHHHHHHHHHccC--------------------------
5451 Confidence 111 2444444444432200 0000 1111122222222222110
5452
5453
5454 Q NP_000290.2 513 CFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKS----------------------KKDATLEACAG 570 (747)
5455 Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss----------------------~d~eVr~~AL~ 570 (747)
5456 ......+++.|+++.|+.++... .+..++..+++
5457 T Consensus 551 ------------------------~~~~~~l~~~gii~~L~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~ 606 (921)
5458 T 6SWY_5 551 ------------------------SNLQSFMLRNGIIDIIEKMLTDPLFNSKKAWDDNEDERRIALQGIPVHEVKANSLW 606 (921)
5459 T ss_dssp ------------------------CTTHHHHHHTTHHHHHHHHHTSTTTCTTSCCCSSCHHHHHHSTTSCCSHHHHHHHH
5460 T ss_pred ------------------------chHHHHHHHCCHHHHHHHHhcChhhccccccCCCccHHHHHhcCCCCHHHHHHHHH
5461 Confidence 01112234556677777766521 45677889999
5462
5463
5464 Q NP_000290.2 571 ALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL-----------L-HRVMG----- 633 (747)
5465 Q Consensus 571 aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e-----------~-~~ll~----- 633 (747)
5466 +|.+++..... . ....+...++++.|+.++.+.++.++..++++|.+++.... . ...+.
5467 T Consensus 607 aL~nL~~~~~~---~-~~~~l~~~~~l~~Ll~lL~~~~~~v~~~a~~~L~nL~~~~~~~~~~ll~~~~~~~~l~~~~~~~ 682 (921)
5468 T 6SWY_5 607 VLRHLMYNCQN---E-EKFQLLAKIPMNLILDFINDPCWAVQAQCFQLLRNLTCNSRKIVNILLEKFKDVEYKIDPQTGN 682 (921)
5469 T ss_dssp HHHHHTTTCCH---H-HHHHHHHHSCHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCSHHHHHHHHTC-------------
5470 T ss_pred HHHHHHcCCCH---H-HHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHhhcccceeeCcCCCC
5471 Confidence 99999875331 0 12344566888999999988888999999999999987632 1 12222
5472
5473
5474 Q NP_000290.2 634 ------NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSS-SMLNNIINLCR---------SSAS 697 (747)
5475 Q Consensus 634 ------~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~-giL~~Ll~LL~---------s~~d 697 (747)
5476 .++++.|+..+.........+..++..++++|.+++...+.....+++. ++++.|..++. .. +
5477 T Consensus 683 ~~~~~~~~ll~~L~~~L~~~~~~~~~~~~v~~~al~~L~nLa~~~~~~~~~ii~~~~il~~L~~lL~~~~~~~~~~~~-~ 761 (921)
5478 T 6SWY_5 683 KISIGSTYLFEFLAKKMRLLNPLDTQQKKAMEGILYIIVNLAAVNENKKQLVIEQDEILNIMSEILVETTTDSSSYGN-D 761 (921)
5479 T ss_dssp ------CCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHCHHHHHHHHHHHTCCSSCCSSGGG-C
5480 T ss_pred ccccccccHHHHHHHHHhccCCCchhcHHHHHHHHHHHHHHHcCCHHHHHHHHhCchHHHHHHHHHHhcCCCccccCC-C
5481 Confidence 3567777777765200000156788999999999997654544444544 67888888887 44 6
5482
5483
5484 Q NP_000290.2 698 PKAAEAARLLLSDMWSSKELQGV 720 (747)
5485 Q Consensus 698 ~eVr~aAL~aLsnL~~~~~~~~~ 720 (747)
5486 +.++..++++|.+|+...+.+..
5487 T Consensus 762 ~~v~~~al~aL~nL~~~~~~~~~ 784 (921)
5488 T 6SWY_5 762 SNLKLACLWVLNNLLWNSSVSHY 784 (921)
5489 T ss_dssp HHHHHHHHHHHHHHHCC------
5490 T ss_pred HHHHHHHHHHHHHHHcCCCcccc
5491 Confidence 78999999999999987655433
5492
5493
5494 No 62
5495 >5IZ8_A Adenomatous polyposis coli protein, ACE-ALA-GLY-GLU-ALA-LEU-ALA-ASP-NH2; APC, ASEF, Colon CANCER, Drug; HET: PGE; 3.06A {Homo sapiens}
5496 Probab=97.83 E-value=6.6e-09 Score=103.80 Aligned_cols=297 Identities=19% Similarity=0.226 Sum_probs=179.9 Template_Neff=12.000
5497
5498 Q NP_000290.2 236 CSEDIECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-----------NQNVQ 304 (747)
5499 Q Consensus 236 ~~~~~~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-----------d~eVr 304 (747)
5500 |.+-++-.+.........+.+.++.++..++.+|.++... ......+...++++.+..++... +..++
5501 T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 101 (354)
5502 T 5IZ8_A 23 CWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFD-EEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLR 101 (354)
5503 T ss_dssp HHHHHHHSCSSCCCCSSCCCCGGGGTHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHHHHHHHHHHCSCCCHHHHHHH
5504 T ss_pred HHHHHHhcCCCCCCCCCCCCCCchHhHHHHHHHHHHccCC-HHHHHHHHHcCHHHHHHHHHHhhHHHhCCCCCCCCHHHH
5505 Confidence 4443343344444444555667778888899999988765 33333344456777777777643 67788
5506
5507
5508 Q NP_000290.2 305 QAAAGALRNLVFRSTTNKLETRR-QNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST--DELKEELIA-DALPVLADRVI 380 (747)
5509 Q Consensus 305 ~~AL~aLs~La~~~~~~~~~ll~-~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~--~~~~~~Lve-giLe~Lv~LL~ 380 (747)
5510 ..++.++.+++.........+.. .++++.+..++. ..++.++..++.++.+++.. ......+.. ++++.|+.++.
5511 T Consensus 102 ~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 180 (354)
5512 T 5IZ8_A 102 RYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLK-SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECAL 180 (354)
5513 T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGG-SSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHH
5514 T ss_pred HHHHHHHHHHhcCCHHHHHHHHccchHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHHHHHH
5515 Confidence 88999999987644333333333 467777888886 55678888999999999874 222333444 77777877776
5516
5517
5518 Q NP_000290.2 381 IPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSA-DAGRQTMRNYSGLIDSLMAYVQ 459 (747)
5519 Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 459 (747)
5520 .. .++++...+..+|.. +... +..++.+..-.|.++.|...+.
5521 T Consensus 181 ~~---------------~~~~~~~~a~~~L~~---------------------l~~~~~~~~~~~~~~~~~~~~l~~~l~ 224 (354)
5522 T 5IZ8_A 181 EV---------------KKESTLKSVLSALWN---------------------LSAHCTENKADICAVDGALAFLVGTLT 224 (354)
5523 T ss_dssp HC---------------CSHHHHHHHHHHHHH---------------------HHTSCHHHHHHHHTSTTHHHHHHHHTT
5524 T ss_pred hc---------------CCHHHHHHHHHHHHH---------------------HHcCChHhHHHHHhhccHHHHHHHHHh
5525 Confidence 42 133443333333322 1111 1122222221345555555444
5526
5527
5528 Q NP_000290.2 460 NCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKG 539 (747)
5529 Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~ 539 (747)
5530 ... ...+..-.+.+..+|.+++..+. .+...
5531 T Consensus 225 ~~~--~~~~~~~~~~~~~~L~~l~~~~~-----------------------------------------------~~~~~ 255 (354)
5532 T 5IZ8_A 225 YRS--QTNTLAIIESGGGILRNVSSLIA-----------------------------------------------TNEDH 255 (354)
5533 T ss_dssp CCC--TTSCCHHHHHHHHHHHHHHHHHH-----------------------------------------------TCHHH
5534 T ss_pred hcC--CCCcHHHHHHHHHHHHHHHHHhc-----------------------------------------------CCHHH
5535 Confidence 210 01113334555555666541100 01112
5536
5537
5538 Q NP_000290.2 540 SGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLL 619 (747)
5539 Q Consensus 540 ~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aL 619 (747)
5540 ...+.+.++++.|+.++. ..++.++..++.+|.+++...+. ....+.+.++++.|+.++.+.++.++..++.+|
5541 T Consensus 256 ~~~l~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L 329 (354)
5542 T 5IZ8_A 256 RQILRENNCLQTLLQHLK-SHSLTIVSNACGTLWNLSARNPK-----DQEALWDMGAVSMLKNLIHSKHKMIAMGSAAAL 329 (354)
5543 T ss_dssp HHHHHTTTHHHHHHHTTT-CSCHHHHHHHHHHHHHHSSSCHH-----HHHHHHTTTHHHHHHHHSSCSSHHHHHHHHHHH
5544 T ss_pred HHHHHHCCHHHHHHHHhh-cCCHHHHHHHHHHHHHHHccCHH-----HHHHHHhCCHHHHHHHHHhccCHHHHHHHHHHH
5545 Confidence 223356678888888887 46777888999999999874332 233445678899999999888888999999999
5546
5547
5548 Q NP_000290.2 620 SNMSRH 625 (747)
5549 Q Consensus 620 snLa~~ 625 (747)
5550 .+++..
5551 T Consensus 330 ~~l~~~ 335 (354)
5552 T 5IZ8_A 330 RNLMAN 335 (354)
5553 T ss_dssp HHHHTT
5554 T ss_pred HHHHcc
5555 Confidence 999876
5556
5557
5558 No 63
5559 >3IFQ_A plakoglobin, E-cadherin; armadillo repeat, Cardiomyopathy, Cell adhesion; HET: SO4; 2.8A {Homo sapiens}
5560 Probab=97.83 E-value=6.4e-09 Score=107.67 Aligned_cols=374 Identities=16% Similarity=0.150 Sum_probs=218.5 Template_Neff=13.100
5561
5562 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNK 322 (747)
5563 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
5564 ..+++.+...+.+.++.++..++.++..+..............++++.+...+. ..++.++..++.++..+..... ..
5565 T Consensus 18 ~~~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~-~~ 96 (553)
5566 T 3IFQ_A 18 TRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHRE-GL 96 (553)
5567 T ss_dssp HHTHHHHHHHHTCSCHHHHHHHHHHHHHHTTSHHHHHHHHTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTSHH-HH
5568 T ss_pred cCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCHHHHHHHhcCchHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHH-HH
5569 Confidence 345666777777777888888999998887653221111112356666777666 4556778888888888775432 22
5570
5571
5572 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDP 400 (747)
5573 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~ 400 (747)
5574 ..+...+.++.+...+. +.++.++..++.++..++..... ...+.. ++++.|..++... ++
5575 T Consensus 97 ~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~ 159 (553)
5576 T 3IFQ_A 97 LAIFKSGGIPALVRMLS-SPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKN----------------NP 159 (553)
5577 T ss_dssp HHHHHTTHHHHHHHGGG-CCCHHHHHHHHHHHHHHHHHCTTHHHHHHHTTGGGGTGGGGGSS----------------CH
5578 T ss_pred HHHHHcCcHHHHHHHcc-CCCHHHHHHHHHHHHHHhcCChHHHHHHHhcCHHHHHHHHHhcC----------------CH
5579 Confidence 22333456777777776 55677888888888888764332 222222 6666676666531 33
5580
5581
5582 Q NP_000290.2 401 EVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
5583 Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
5584 ++...+..+|..-... .+ ..+..+ --.++++.|...+... .+......++..|.
5585 T Consensus 160 ~~~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~ 213 (553)
5586 T 3IFQ_A 160 KFLAITTDCLQLLAYG------NQ--------------ESKLII-LANGGPQALVQIMRNY-----SYEKLLWTTSRVLK 213 (553)
5587 T ss_dssp HHHHHHHHHHHHHHTT------CH--------------HHHHHH-HHTTHHHHHHHHHHHC-----CCHHHHHHHHHHHH
5588 T ss_pred HHHHHHHHHHHHHHcC------CH--------------HHHHHH-HHCCHHHHHHHHHhcC-----CcHHHHHHHHHHHH
5589 Confidence 4444444433321100 00 000000 0113344443333210 01111222223333
5590
5591
5592 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
5593 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
5594 +++..- .....+.+.++++.++.++. +.
5595 T Consensus 214 ~l~~~~---------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~ 241 (553)
5596 T 3IFQ_A 214 VLSVCP---------------------------------------------------SNKPAIVEAGGMQALGKHLT-SN 241 (553)
5597 T ss_dssp HHTTST---------------------------------------------------THHHHHHHTTHHHHHHGGGG-SS
5598 T ss_pred HHhCCc---------------------------------------------------chHHHHHHCchHHHHHHHHh-cC
5599 Confidence 322100 00112234567888888887 46
5600
5601
5602 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFP 638 (747)
5603 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~ 638 (747)
5604 ++.++..++.+|.+++..... ... ..++++.+..++.+.++.++..++.+|.+++... .. ..+...++++
5605 T Consensus 242 ~~~~~~~a~~~l~~l~~~~~~------~~~--~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~ 313 (553)
5606 T 3IFQ_A 242 SPRLVQNCLWTLRNLSDVATK------QEG--LESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVE 313 (553)
5607 T ss_dssp CHHHHHHHHHHHHHHHTTCTT------CSC--CHHHHHHHHTTTTCCCHHHHHHHHHHHHHHTTTCHHHHHHHTTTTHHH
5608 T ss_pred CHHHHHHHHHHHHHhCChhHH------HHH--HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHccHHH
5609 Confidence 778888999999999865321 111 2467888888888888889999999999998763 22 2334455777
5610
5611
5612 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ---LAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
5613 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e---~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
5614 .+...+... ..++.++..++.+|.+++...+. ....+...+.++.+..++.+..++.++..++.+|.+++...
5615 T Consensus 314 ~l~~~l~~~----~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~ 389 (553)
5616 T 3IFQ_A 314 ALIHAILRA----GDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCP 389 (553)
5617 T ss_dssp HHHHHHHHH----TTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHTTTHHHHHHHGGGCTTCHHHHHHHHHHHHHHTTSG
5618 T ss_pred HHHHHHHHc----CCChHhHHHHHHHHHHHhcCCChHHHHHHHHHHcchHHHHHHHHcCCCChHHHHHHHHHHHHHhcCc
5619 Confidence 777766531 02567888999999999875332 11223344567888888876523788899999999998876
5620
5621
5622 Q NP_000290.2 716 ELQGVLRQQG 725 (747)
5623 Q Consensus 716 ~~~~~~~~~~ 725 (747)
5624 +....+...|
5625 T Consensus 390 ~~~~~~~~~~ 399 (553)
5626 T 3IFQ_A 390 ANHAPLQEAA 399 (553)
5627 T ss_dssp GGHHHHHHTT
5628 T ss_pred ccHHHHHHcc
5629 Confidence 6554444333
5630
5631
5632 No 64
5633 >4I2W_A Protein UNC-45, Heat shock 70; chaperone, myosin folding, protein filaments; 3.6A {Caenorhabditis elegans}
5634 Probab=97.83 E-value=7.9e-09 Score=122.23 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=42.2 Template_Neff=8.600
5635
5636 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVF 316 (747)
5637 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~ 316 (747)
5638 +++.|+.++...+..++..+..++..+... ......+...+.++.|+.++.+.++..+..++.+|..++.
5639 T Consensus 647 ~~~~Lv~ll~~~s~~~r~~~~~~l~~l~~~-~~~R~~ivq~g~~~~Ll~ll~~~~~~~~~~Aa~ALa~l~~ 716 (961)
5640 T 4I2W_A 647 AVPACVAVSKTESKNALELIARSLLAFAEY-EDLRGRIIAEGGTVLCLRLTKEASGEGKIKAGHAIAKLGA 716 (961)
5641 T ss_dssp SSHHHHHTTCCCCSHHHHHHHHHHHTTSSS-STTTTTTTTSSHHHHHHHHHHHSTTHHHHHHHHHHHTTSS
5642 T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHCchHHHHHHHHhcCChHHHHHHHHHHHHHHc
5643 Confidence 344555555555566677777777777643 3344445555666777776665555566666666666653
5644
5645
5646 No 65
5647 >4R10_A Protein humpback-2, Cadherin-related hmr-1; armadillo repeat, cell adhesion, phosphorylation; HET: SEP; 2.3A {Caenorhabditis elegans}
5648 Probab=97.79 E-value=8.7e-09 Score=108.23 Aligned_cols=398 Identities=14% Similarity=0.146 Sum_probs=205.5 Template_Neff=12.700
5649
5650 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
5651 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
5652 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+...++.++..++.++..++.........+
5653 T Consensus 115 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 194 (572)
5654 T 4R10_A 115 GLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSDSRAQARALNAVEALTPHLHKTNPKLLAQVADGLYFLLIDDAPSKITF 194 (572)
5655 T ss_dssp THHHHHHGGGCSCHHHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHGGGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHH
5656 T ss_pred cHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHCCChHHHHHH
5657 Confidence 34555666666677888889999998866443333334444677778888877778888899999988875443333333
5658
5659
5660 Q NP_000290.2 326 RRQNGIREAVSLLRR-TGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
5661 Q Consensus 326 l~~~IL~~Ll~lL~s-s~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
5662 ...+++..+...+.. ..+..++..++.++..++........+.. ++++.++..+... .++++.
5663 T Consensus 195 ~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~~~~~ 259 (572)
5664 T 4R10_A 195 LSLLGPQILVSILREYSDHRKLIYTVVRCIRSLSVCPSNKPALISLGCLPALYVELCTA---------------KDERSQ 259 (572)
5665 T ss_dssp HHTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHHHHTTC---------------CSHHHH
5666 T ss_pred HhccHHHHHHHHHHHCCCCHHHHHHHHHHHHHHhcCcchHHHHHhCCcHHHHHHHHhcC---------------CCHHHH
5667 Confidence 344566667766641 23456778888888888765443333333 5555554433321 123333
5668
5669
5670 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
5671 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
5672 ..+..++..-.. ....++.+ .+++..+...++. -+..-...+...|.++.
5673 T Consensus 260 ~~a~~~l~~l~~---------------------~~~~~~~~---~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 309 (572)
5674 T 4R10_A 260 TAILVAMRNLSD---------------------SATNEENL---TQLIIKLLEIIRV------ANDGMTACACGTLSNLT 309 (572)
5675 T ss_dssp HHHHHHHHHHGG---------------------GCTTCSCC---HHHHHHHHHHHHH------CCHHHHHHHHHHHHHHT
5676 T ss_pred HHHHHHHHHHcC---------------------ChHHHHHH---HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHH
5677 Confidence 333333322110 00011111 1123333322211 12222333444444444
5678
5679
5680 Q NP_000290.2 484 YRLDAEVP---------TRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLN 554 (747)
5681 Q Consensus 484 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~ 554 (747)
5682 ..-+.... .-...+.....+.........+..+-.. . ...+......+...++++.++.
5683 T Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~----~--------~~~~~~~~~~~~~~~~~~~l~~ 377 (572)
5684 T 4R10_A 310 CNNTRNKQTVCSHGGIDALVTAIRRLPEVEEVTEPALCALRHCTA----R--------HSLAEEAQSELRFCQAFPVILD 377 (572)
5685 T ss_dssp SSCHHHHHHHHHTTHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTS----S--------STTHHHHHHHHHHTTHHHHHHH
5686 T ss_pred cCCHHHHHHHHHCcHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhc----c--------CCCcHHHHHHHhhCChHHHHHH
5687 Confidence 32111000 0000000000000000000000000000 0 0000111122245567788888
5688
5689
5690 Q NP_000290.2 555 LMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK------EKGLPQIARLLQS----------------GNSDVV 612 (747)
5691 Q Consensus 555 LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie------~giI~~Ll~LL~s----------------~d~eVr 612 (747)
5692 ++. +.+..++..++.+|.+++..... ...+.+ .++++.+..++.. .++.++
5693 T Consensus 378 ~l~-~~~~~v~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 450 (572)
5694 T 4R10_A 378 QLE-TLRTPVIKAALGVIRNSALLQTN------LIELTQEQTANGHTAVSLTMDILRRAITAIEENPDIAVDGVPMWGVI 450 (572)
5695 T ss_dssp HHT-TCCHHHHHHHHHHHHHHHTSHHH------HHHHHHCCCTTCCCHHHHHHHHHHHHHHHHHHCTTCEETTEEHHHHH
5696 T ss_pred HHh-cCCHHHHHHHHHHHHHHhccchh------HHHHHHHhhhCCCCcHHHHHHHHHHHHHhcccCcchhccCccHHHHH
5697 Confidence 887 36667777888888888764221 111122 2344555555432 234566
5698
5699
5700 Q NP_000290.2 613 RSGASLLSNMSRHPLLH-RVMGN----------QVFPEVTRLL------TSHTGNTSNSEDILSSACYTVRNLMASQPQL 675 (747)
5701 Q Consensus 613 ~~AL~aLsnLa~~~e~~-~ll~~----------giI~~Ll~LL------~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~ 675 (747)
5702 ..++.+|.+++...... .+... ++++.+..++ .. .++.++..++.+|.+++.. +..
5703 T Consensus 451 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~------~~~~v~~~a~~~l~~l~~~-~~~ 523 (572)
5704 T 4R10_A 451 EGAVSALHQLANHPAVAAACCDDIGQVGNPECPPFLDLLHRLLAHPRLGSM------DDEVLEREILGLLYQLSKR-PDG 523 (572)
5705 T ss_dssp HHHHHHHHHHTTSHHHHHHHHHCCCCTTCTTSCCHHHHHHHHHHSHHHHSC------SCSHHHHHHHHHHHHHTSS-HHH
5706 T ss_pred HHHHHHHHHHhCCHHHHHHHhccccCCCCCCCccHHHHHHHHHhCcccCCC------ChHHHHHHHHHHHHHHhcC-Cch
5707 Confidence 77788888877653221 11111 4666666666 33 3677888888888888865 344
5708
5709
5710 Q NP_000290.2 676 AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
5711 Q Consensus 676 ~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
5712 ...+...++++.|..++.+. ++.++..++.+|.++....
5713 T Consensus 524 ~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~L~~l~~~~ 562 (572)
5714 T 4R10_A 524 ARAVESTGVSALLMESRGSQ-YKSVVTYANGVLSNLKRGD 562 (572)
5715 T ss_dssp HHHHHTTTTHHHHHHHTTCS-CHHHHHHHHHHHHHHHHHH
5716 T ss_pred hhHHHHcChhhHHhHhhCCC-CchHHHHHHHHHHHhhcCC
5717 Confidence 44455566778888888766 7788888888888887654
5718
5719
5720 No 66
5721 >5T94_B Guanine nucleotide exchange factor SRM1; Nuclear Import, Importin alpha, RCC1; 2.631A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
5722 Probab=97.78 E-value=9.3e-09 Score=108.50 Aligned_cols=159 Identities=19% Similarity=0.225 Sum_probs=117.7 Template_Neff=12.200
5723
5724 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
5725 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
5726 ...++++.|+.++. ..++.++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++
5727 T Consensus 254 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~ 327 (542)
5728 T 5T94_B 254 VVSQALPTLAKLIY-SMDTETLVDACWAISYLSDGPQE-----AIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIV 327 (542)
5729 T ss_dssp HHGGGHHHHHHHTT-CCCHHHHHHHHHHHHHHSSSSHH-----HHHHHHHTTCHHHHHHTTSCSSHHHHHHHHHHHHHHT
5730 T ss_pred HHhcHHHHHHHHHh-cCCHHHHHHHHHHHHHHcCCCHH-----HHHHHHhCCHHHHHHHHhcCCCHHHHHHHHHHHHHHH
5731 Confidence 34556777777777 46677888899999988865332 2333345668888888888888889999999999998
5732
5733
5734 Q NP_000290.2 624 RHPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
5735 Q Consensus 624 ~~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
5736 .... . ......++++.|..++.+ .++.++..++++|.+++...+.....+...++++.|+.++.+. ++.++
5737 T Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~ 400 (542)
5738 T 5T94_B 328 TGNDLQTQVVINAGVLPALRLLLSS------PKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVA-EYKTK 400 (542)
5739 T ss_dssp TSCHHHHHHHHHTTHHHHHHHHTTC------SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHS-CHHHH
5740 T ss_pred cCCHHHHHHHHHCChHHHHHHHhhC------CCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCchHHHHHHHHcC-CHHHH
5741 Confidence 7632 2 233445678888888866 3678889999999999876555555566666788888888766 77888
5742
5743
5744 Q NP_000290.2 702 EAARLLLSDMWSSK 715 (747)
5745 Q Consensus 702 ~aAL~aLsnL~~~~ 715 (747)
5746 ..++.+|.+++...
5747 T Consensus 401 ~~a~~~l~~l~~~~ 414 (542)
5748 T 5T94_B 401 KEACWAISNASSGG 414 (542)
5749 T ss_dssp HHHHHHHHHHHGGG
5750 T ss_pred HHHHHHHHHHHcCC
5751 Confidence 99999999888764
5752
5753
5754 No 67
5755 >6KBN_A Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 3.2A {Saccharomyces cerevisiae}
5756 Probab=97.78 E-value=9.2e-09 Score=107.80 Aligned_cols=358 Identities=22% Similarity=0.258 Sum_probs=207.0 Template_Neff=12.700
5757
5758 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
5759 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
5760 .+++.+...+.+.++.++..++.++..+....... ....+++.+...+.+.++.++..++.++..++..... ...
5761 T Consensus 32 ~~i~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~----~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~-~~~ 106 (563)
5762 T 6KBN_A 32 GPLKALTTLVYSDNLNLQRSAALAFAEITEKYVRQ----VSREVLEPILILLQSQDPQIQVAACAALGNLAVNNEN-KLL 106 (563)
5763 T ss_dssp CTHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCCC----CCHHHHHHHHHHHSSCCHHHHHHHHHHHHHHTTSHHH-HHH
5764 T ss_pred CHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhHHH----hccchHHHHHHHhcCCCHHHHHHHHHHHHHHHcCcch-HHH
5765 Confidence 34566666676677788888888888876532211 2245666777777777777888888888887754322 222
5766
5767
5768 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
5769 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
5770 ....+.++.+...+. ..++.++..++.++..++........+.. ++++.|..++... ++++-
5771 T Consensus 107 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v~ 169 (563)
5772 T 6KBN_A 107 IVEMGGLEPLINQMM-GDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSK----------------HIRVQ 169 (563)
5773 T ss_dssp HHHHTCHHHHHHHHH-SSCHHHHHHHHHHHHHTTCSHHHHHHHHTTTTHHHHHHHTTCS----------------SHHHH
5774 T ss_pred HHHCCcHHHHHHHhh-CCCHHHHHHHHHHHHHHhCCCchHHHHHhcChHHHHHHHccCC----------------CHHHH
5775 Confidence 233355666777665 45667788888888888765433222222 5566666655421 23333
5776
5777
5778 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
5779 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
5780 ..+..++..-. .....+..+. ..++++.+...++. -+..-...+...|.++.
5781 T Consensus 170 ~~a~~~l~~l~---------------------~~~~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 221 (563)
5782 T 6KBN_A 170 RNATGALLNMT---------------------HSEENRKELV-NAGAVPVLVSLLSS------TDPDVQYYCTTALSNIA 221 (563)
5783 T ss_dssp HHHHHHHHHTT---------------------SSHHHHHHHH-TTTCHHHHHHHTTC------SSHHHHHHHHHHHHHHT
5784 T ss_pred HHHHHHHHHHh---------------------CCHHHHHHHH-HCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHh
5785 Confidence 33333322110 0000111111 12344444444331 11222223333333332
5786
5787
5788 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
5789 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
5790 ...+ . .........++++.+..++. +.++.
5791 T Consensus 222 ~~~~------------------------------------------------~-~~~~~~~~~~~~~~l~~~l~-~~~~~ 251 (563)
5792 T 6KBN_A 222 VDEA------------------------------------------------N-RKKLAQTEPRLVSKLVSLMD-SPSSR 251 (563)
5793 T ss_dssp TSHH------------------------------------------------H-HHHHHHHCSSHHHHHHHHTT-CSCHH
5794 T ss_pred CCHH------------------------------------------------H-HHHHHhhchhHHHHHHHHhc-CCCHH
5795 Confidence 2000 0 00000012346777888887 46777
5796
5797
5798 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTR 642 (747)
5799 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~ 642 (747)
5800 ++..++.+|.+++..... ...+...++++.+..++.+.++.++..++.+|.+++..... ......++++.+..
5801 T Consensus 252 ~~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~ 325 (563)
5802 T 6KBN_A 252 VKCQATLALRNLASDTSY------QLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVR 325 (563)
5803 T ss_dssp HHHHHHHHHHHHTTSHHH------HHHHHHTTCHHHHHHHHTCSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTCHHHHHT
5804 T ss_pred HHHHHHHHHHHHhCChhH------HHHHHHCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCcchHHHHHHCCcHHHHHH
5805 Confidence 888999999998875321 22334567888888888888888999999999999876433 23344567788888
5806
5807
5808 Q NP_000290.2 643 LLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
5809 Q Consensus 643 LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
5810 ++... .++.++..++.+|.+++...+.....+...++++.+..++.+. ++.++..++.++..+...
5811 T Consensus 326 ~l~~~-----~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~~ 391 (563)
5812 T 6KBN_A 326 LLDYK-----DSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKELALDS-PVSVQSEISACFAILALA 391 (563)
5813 T ss_dssp TTTCT-----TCHHHHHHHHHHHHHHHHHCSTTHHHHHHTTHHHHHHHHHTSS-CHHHHHHHHHHHHHHTTC
5814 T ss_pred HhCCC-----CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHhCC-CHHHHHHHHHHHHHHhcC
5815 Confidence 87652 2478888999999999876444444455555677777776654 556666666666655543
5816
5817
5818 No 68
5819 >6KBN_C Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 3.2A {Saccharomyces cerevisiae}
5820 Probab=97.78 E-value=9.2e-09 Score=107.80 Aligned_cols=358 Identities=22% Similarity=0.258 Sum_probs=206.7 Template_Neff=12.700
5821
5822 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
5823 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
5824 .+++.+...+.+.++.++..++.++..+....... ....+++.+...+.+.++.++..++.++..++..... ...
5825 T Consensus 32 ~~i~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~----~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~-~~~ 106 (563)
5826 T 6KBN_C 32 GPLKALTTLVYSDNLNLQRSAALAFAEITEKYVRQ----VSREVLEPILILLQSQDPQIQVAACAALGNLAVNNEN-KLL 106 (563)
5827 T ss_dssp -CHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCCC----CCHHHHHHHHHHHCCSCHHHHHHHHHHHHHHTTSHHH-HHH
5828 T ss_pred CHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhHHH----hccchHHHHHHHhcCCCHHHHHHHHHHHHHHHcCcch-HHH
5829 Confidence 34566666676677788888888888876532211 2245666777777777777888888888887754322 222
5830
5831
5832 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
5833 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
5834 ....+.++.+...+. ..++.++..++.++..++........+.. ++++.|..++... ++++-
5835 T Consensus 107 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v~ 169 (563)
5836 T 6KBN_C 107 IVEMGGLEPLINQMM-GDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSK----------------HIRVQ 169 (563)
5837 T ss_dssp HHHTSCSHHHHHHTT-SSCHHHHHHHHHHHHHTTCSHHHHHHHHGGGCHHHHHHHTTSS----------------SHHHH
5838 T ss_pred HHHCCcHHHHHHHhh-CCCHHHHHHHHHHHHHHhCCCchHHHHHhcChHHHHHHHccCC----------------CHHHH
5839 Confidence 233355666777665 45667788888888888765433222222 5566666655421 23333
5840
5841
5842 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
5843 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
5844 ..+..++..-. .....+..+. ..++++.+...++. -+..-...+...|.++.
5845 T Consensus 170 ~~a~~~l~~l~---------------------~~~~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 221 (563)
5846 T 6KBN_C 170 RNATGALLNMT---------------------HSEENRKELV-NAGAVPVLVSLLSS------TDPDVQYYCTTALSNIA 221 (563)
5847 T ss_dssp HHHHHHHHHHT---------------------SSHHHHHHHH-TTTCHHHHHHHTTC------SSHHHHHHHHHHHHHHT
5848 T ss_pred HHHHHHHHHHh---------------------CCHHHHHHHH-HCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHh
5849 Confidence 33333322110 0000111111 12344444444331 11222223333333332
5850
5851
5852 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
5853 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
5854 ...+ . .........++++.+..++. +.++.
5855 T Consensus 222 ~~~~------------------------------------------------~-~~~~~~~~~~~~~~l~~~l~-~~~~~ 251 (563)
5856 T 6KBN_C 222 VDEA------------------------------------------------N-RKKLAQTEPRLVSKLVSLMD-SPSSR 251 (563)
5857 T ss_dssp TSHH------------------------------------------------H-HHHHHHSSTTHHHHHHHHTT-CSSHH
5858 T ss_pred CCHH------------------------------------------------H-HHHHHhhchhHHHHHHHHhc-CCCHH
5859 Confidence 2000 0 00000012346777888887 46777
5860
5861
5862 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTR 642 (747)
5863 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~ 642 (747)
5864 ++..++.+|.+++..... ...+...++++.+..++.+.++.++..++.+|.+++..... ......++++.+..
5865 T Consensus 252 ~~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~ 325 (563)
5866 T 6KBN_C 252 VKCQATLALRNLASDTSY------QLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVR 325 (563)
5867 T ss_dssp HHHHHHHHHHHHTTSHHH------HHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTCHHHHHH
5868 T ss_pred HHHHHHHHHHHHhCChhH------HHHHHHCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCcchHHHHHHCCcHHHHHH
5869 Confidence 888999999998875321 22334567888888888888888999999999999876433 23344567788888
5870
5871
5872 Q NP_000290.2 643 LLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
5873 Q Consensus 643 LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
5874 ++... .++.++..++.+|.+++...+.....+...++++.+..++.+. ++.++..++.++..+...
5875 T Consensus 326 ~l~~~-----~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~~ 391 (563)
5876 T 6KBN_C 326 LLDYK-----DSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKELALDS-PVSVQSEISACFAILALA 391 (563)
5877 T ss_dssp HTTCS-----SCHHHHHHHHHHHHHHHHHCSTTSHHHHTTCHHHHHHHHHTSS-CHHHHHHHHHHHHHHTTC
5878 T ss_pred HhCCC-----CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHhCC-CHHHHHHHHHHHHHHhcC
5879 Confidence 87652 2478888999999999876444444455555677777776654 556666666666655543
5880
5881
5882 No 69
5883 >2Z6G_A B-catenin; Full-Length, Beta-Catenin, CELL ADHESION; 3.4A {Danio rerio}
5884 Probab=97.75 E-value=1.2e-08 Score=115.80 Aligned_cols=373 Identities=17% Similarity=0.153 Sum_probs=224.6 Template_Neff=10.700
5885
5886 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
5887 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
5888 ..+++.+...+.+.++.++..++.+|..+..............+++..+...+.+ .+..++..++.+|..+..... ..
5889 T Consensus 149 ~~~l~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~L~~~~~~~vr~~a~~~L~~l~~~~~-~~ 227 (780)
5890 T 2Z6G_A 149 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHRE-GL 227 (780)
5891 T ss_pred cChHHHHHHHccCCCHHHHHHHHHHHHHHhCChHHHHHHHhCCCHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCHH-HH
5892 Confidence 3566777777877788899999999998876532221111122466777777765 677888889999988875422 22
5893
5894
5895 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI-A-DALPVLADRVIIPFSGWCDGNSNMSREVVDP 400 (747)
5896 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lv-e-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~ 400 (747)
5897 ..+...++++.+..++. ..++.++..++.+|..++.........+ . ++++.|+.++..+ ++
5898 T Consensus 228 ~~~~~~~~i~~L~~lL~-~~~~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~----------------~~ 290 (780)
5899 T 2Z6G_A 228 LAIFKSGGIPALVNMLG-SPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT----------------NV 290 (780)
5900 T ss_pred HHHHHCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCC----------------CH
5901 Confidence 22333567778888886 5567788899999998886533222222 2 6677777766531 34
5902
5903
5904 Q NP_000290.2 401 EVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
5905 Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
5906 ++-..+..+|..-.... ...+..+. ..+++..|...+... .+.+-.+.++.+|.
5907 T Consensus 291 ~v~~~a~~~L~~l~~~~--------------------~~~~~~~~-~~~~~~~L~~~l~~~-----~~~~v~~~a~~~L~ 344 (780)
5908 T 2Z6G_A 291 KFLAITTDCLQILAYGN--------------------QESKLIIL-ASGGPQALVNIMRTY-----TYEKLLWTTSRVLK 344 (780)
5909 T ss_pred HHHHHHHHHHHHHHcCC--------------------HHHHHHHH-HCCcHHHHHHHhCCC-----CCHHHHHHHHHHHH
5910 Confidence 44455555554311100 00011110 123444444333221 01112222222332
5911
5912
5913 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
5914 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
5915 +++... .....+.+.++++.|+.++. +.
5916 T Consensus 345 ~l~~~~---------------------------------------------------~~~~~~~~~~~l~~L~~~l~-~~ 372 (780)
5917 T 2Z6G_A 345 VLSVCS---------------------------------------------------SNKPAIVEAGGMQALGLHLT-DP 372 (780)
5918 T ss_pred HHhCCH---------------------------------------------------HHHHHHHHCCHHHHHHHHcc-CC
5919 Confidence 222100 00112245667888888887 46
5920
5921
5922 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFP 638 (747)
5923 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~ 638 (747)
5924 +..++..++.+|.+++..... .. ...++++.|+.++.+.+..++..++.+|.+++.. ... ..+...++++
5925 T Consensus 373 ~~~v~~~al~~L~~l~~~~~~------~~--~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~ 444 (780)
5926 T 2Z6G_A 373 SQRLVQNCLWTLRNLSDAATK------QE--GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIE 444 (780)
5927 T ss_pred CHHHHHHHHHHHHHHhcCCCC------HH--HHcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHH
5928 Confidence 778888999999999864321 11 1256788888888888888999999999999876 222 2334456777
5929
5930
5931 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL---AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
5932 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~---~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
5933 .|+..+... ..++.++..++.+|.+++...+.. ...+...++++.|+.++....+..++..++.+|.+++...
5934 T Consensus 445 ~L~~~l~~~----~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~v~~~a~~~L~~l~~~~ 520 (780)
5935 T 2Z6G_A 445 ALVRTVLRA----GDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCP 520 (780)
5936 T ss_pred HHHHHHhcC----CCCHHHHHHHHHHHHHHHcCCccHHHHHHHHHHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCH
5937 Confidence 777766521 035678899999999998653221 2223334567888888875435678899999999988776
5938
5939
5940 Q NP_000290.2 716 ELQGVLRQQ 724 (747)
5941 Q Consensus 716 ~~~~~~~~~ 724 (747)
5942 +....+...
5943 T Consensus 521 ~~~~~~~~~ 529 (780)
5944 T 2Z6G_A 521 ANHAPLREQ 529 (780)
5945 T ss_pred HHHHHHHhC
5946 Confidence 654444333
5947
5948
5949 No 70
5950 >5EWP_B Uncharacterized protein; translocation and attachment of rhoptries; 1.8A {Plasmodium falciparum Santa Lucia}
5951 Probab=97.73 E-value=1.3e-08 Score=96.81 Aligned_cols=118 Identities=16% Similarity=0.189 Sum_probs=81.2 Template_Neff=11.800
5952
5953 Q NP_000290.2 263 AIGAYYIQHTCFQ--DESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRR 340 (747)
5954 Q Consensus 263 ~sAL~aLsnLs~~--~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~s 340 (747)
5955 ..++.++.++... .......+...+.++.+..++...+..++..++.++.+++.........+...+.++.++.++.
5956 T Consensus 60 ~~~~~~l~~l~~~~~~~~~~~~~~~~g~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~- 138 (252)
5957 T 5EWP_B 60 ALSATQLAILASKENEPHYKDAIREANGIAVFINLLKSHELDRVHAAVVALSFLSVDNVKNCICMFESGALPYLISGMK- 138 (252)
5958 T ss_dssp HHHHHHHHHHHTCTTCTHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTCHHHHHHHTT-
5959 T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHcccHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHhh-
5960 Confidence 4677788777754 2333344445567788888887777778889999999988654444444444567777888776
5961
5962
5963 Q NP_000290.2 341 TGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVII 381 (747)
5964 Q Consensus 341 s~d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
5965 ..++.++..++.++.+++.. ......+.+ ++++.|+.++..
5966 T Consensus 139 ~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 181 (252)
5967 T 5EWP_B 139 SNIDGMKAACAQTCRNIFVLDKKYKKEFLKLGGITQLVNLLEL 181 (252)
5968 T ss_dssp CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHTTSC
5969 T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHCChHHHHHHHhcC
5970 Confidence 55678889999999999864 333334444 777888877764
5971
5972
5973 No 71
5974 >5XGC_A Rap1 GTPase-GDP dissociation stimulator 1; armadillo GEF, ONCOPROTEIN; 2.1A {Homo sapiens}
5975 Probab=97.72 E-value=1.3e-08 Score=103.51 Aligned_cols=358 Identities=19% Similarity=0.180 Sum_probs=198.3 Template_Neff=13.200
5976
5977 Q NP_000290.2 257 QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVS 336 (747)
5978 Q Consensus 257 sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~ 336 (747)
5979 .++.++..++.++..+.... .....+...++++.+...+.+.++.++..++.++..++...+.....+...++++.+..
5980 T Consensus 5 ~~~~~~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ 83 (503)
5981 T 5XGC_A 5 SQSSCKAKVANIIAEVAKNE-FMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVK 83 (503)
5982 T ss_dssp -------------------C-CCCCCSSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHSCCCSHHHHHHHHHTTHHHHHHH
5983 T ss_pred chHHHHHHHHHHHHHHhcCh-hhhhhhhhcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCchHHHHHHHCChHHHHHH
5984 Confidence 34567777888888887642 22333444567788888888778888999999999988654333333444567778888
5985
5986
5987 Q NP_000290.2 337 LLRRT-GNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRL 414 (747)
5988 Q Consensus 337 lL~ss-~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (747)
5989 .+... .++.++..++.++..++........+.. ++++.|+.++.... ++++-..+..+|..-
5990 T Consensus 84 ~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~---------------~~~~~~~a~~~l~~l- 147 (503)
5991 T 5XGC_A 84 LLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQI---------------EHDKREMIFEVLAPL- 147 (503)
5992 T ss_dssp HHHHTTTCHHHHHHHHHHHHHHTTSHHHHHHHTTTTHHHHHHHHHHHCC---------------CHHHHHHHHHHHHHH-
5993 T ss_pred HHhccCCCHHHHHHHHHHHHHHHccHHHHHHHhcCCHHHHHHHHHHhcC---------------ChhHHHHHHHHHHHH-
5994 Confidence 87622 3677888999999998876443333333 67777777776421 233333333333211
5995
5996
5997 Q NP_000290.2 415 GMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRY 494 (747)
5998 Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (747)
5999 ...+..+..+. -.|.+..++..+... ++.........+.+...
6000 T Consensus 148 --------------------~~~~~~~~~~~-~~~~~~~l~~~l~~~------~~~~~~~~~~~l~~~~~---------- 190 (503)
6001 T 5XGC_A 148 --------------------AENDAIKLQLV-EAGLVECLLEIVQQK------VDSDKEDDITELKTGSD---------- 190 (503)
6002 T ss_dssp --------------------TTSHHHHHHHH-HTTHHHHHHHHHHHH------TTCCCHHHHHHHHHHHH----------
6003 T ss_pred --------------------HcCHHHHHHHH-HCCHHHHHHHHHHhc------CCCCCHHHHHHHHHHHH----------
6004 Confidence 11111111111 123444444433221 11111111111100000
6005
6006
6007 Q NP_000290.2 495 RQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSD---AIRTYLNLMGKSKKDATLEACAGA 571 (747)
6008 Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G---~I~~LL~LL~ss~d~eVr~~AL~a 571 (747)
6009 .+.+- ... .+. ...+...+ .++.++.++. +.++.++..++.+
6010 T Consensus 191 ------------------~~~~~----~~~---------~~~---~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~ 235 (503)
6011 T 5XGC_A 191 ------------------LMVLL----LLG---------DES---MQKLFEGGKGSVFQRVLSWIP-SNNHQLQLAGALA 235 (503)
6012 T ss_dssp ------------------HHHHH----TTS---------HHH---HHHHHGGGTCHHHHHHHHHTT-SSCHHHHHHHHHH
6013 T ss_pred ------------------HHHHH----HhC---------Cch---HHHHHhcCcccHHHHHHHHcc-CCCHHHHHHHHHH
6014 Confidence 00000 000 000 01112222 6777888887 4677888899999
6015
6016
6017 Q NP_000290.2 572 LQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ----SGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTS 646 (747)
6018 Q Consensus 572 L~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~----s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s 646 (747)
6019 |.+++..... ...+.+.++++.|+.++. +.+..++..++.+|.+++..... ..+...++++.+..++.+
6020 T Consensus 236 L~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~ 309 (503)
6021 T 5XGC_A 236 IANFARNDAN------CIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKS 309 (503)
6022 T ss_dssp HHHHCSSHHH------HHHHHHTTHHHHHHHHHHTTTTTCCHHHHHHHHHHHHHHTCSHHHHHHHHHHTHHHHHHTTTTC
6023 T ss_pred HHHHHCChhH------HHHHHHCCHHHHHHHHHHhccccCCHHHHHHHHHHHHHhcCCHHHHHHHHHcCHHHHHHHHHcC
6024 Confidence 9999874321 333456688888988887 56788899999999999876433 333445678888888876
6025
6026
6027 Q NP_000290.2 647 HTGNTSNSEDILSSACYTVRNLMASQPQLAKQYF-SSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
6028 Q Consensus 647 ~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lv-e~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
6029 .++.++..++++|.+++...+.....+. ..++++.++.++.+.....++..++.+|.+++...
6030 T Consensus 310 ------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~ 373 (503)
6031 T 5XGC_A 310 ------EMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHS 373 (503)
6032 T ss_dssp ------CCHHHHHHHHHHHHHHTTTCHHHHHHHHTCHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHHHH
6033 T ss_pred ------CCHHHHHHHHHHHHHHHccCHHHHHHHccccchHHHHHHHHccCCccchHHHHHHHHHHHHHHc
6034 Confidence 3678899999999999875433333332 24567788888776523378888999998886544
6035
6036
6037 No 72
6038 >6BW9_A Importin subunit alpha-3, Protein W; Complex, Hendra virus, Importin, Karyopherin; 1.6A {Homo sapiens}
6039 Probab=97.70 E-value=1.6e-08 Score=102.40 Aligned_cols=367 Identities=16% Similarity=0.162 Sum_probs=222.4 Template_Neff=12.900
6040
6041 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTN 321 (747)
6042 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~ 321 (747)
6043 ...++.+...+.+.++.++..++.++..+...... ....+...++++.+...+. ..++.++..++.++..++......
6044 T Consensus 8 ~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~ 87 (459)
6045 T 6BW9_A 8 NTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQ 87 (459)
6046 T ss_dssp --CHHHHHHHHTCSSHHHHHHHHHHHHHHHHSSSSCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHTTSCHHH
6047 T ss_pred ccchHHHHHhccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHH
6048 Confidence 34556667777777788899999999888764321 1122333456777777776 456778888999998887654433
6049
6050
6051 Q NP_000290.2 322 KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVD 399 (747)
6052 Q Consensus 322 ~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~ 399 (747)
6053 ...+...++++.+...+. +.++.++..++.++..++... .....+.. ++++.++.++... .+
6054 T Consensus 88 ~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~ 151 (459)
6055 T 6BW9_A 88 TQAVVQSNAVPLFLRLLH-SPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS---------------IP 151 (459)
6056 T ss_dssp HHHHHHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTCSTT---------------SC
6057 T ss_pred HHHHhhCCHHHHHHHHhc-CCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHhccCCC---------------CC
6058 Confidence 333334457777888776 556788889999999887652 22222333 5666666666421 12
6059
6060
6061 Q NP_000290.2 400 PEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVL 479 (747)
6062 Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (747)
6063 +++-..+..++..- ..............+++..+...+.. .+..-...+...|
6064 T Consensus 152 ~~~~~~a~~~l~~l---------------------~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l 204 (459)
6065 T 6BW9_A 152 ITFLRNVTWVMVNL---------------------CRHKDPPPPMETIQEILPALCVLIHH------TDVNILVDTVWAL 204 (459)
6066 T ss_dssp HHHHHHHHHHHHHH---------------------HCCCSSCCCHHHHHHHHHHHHHHTTC------CCHHHHHHHHHHH
6067 T ss_pred HHHHHHHHHHHHHH---------------------hcCCCCCCCHHHHHHHHHHHHHHHhc------CCHHHHHHHHHHH
6068 Confidence 33333333332211 10000001111223344444433321 1112222223233
6069
6070
6071 Q NP_000290.2 480 HNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKS 559 (747)
6072 Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss 559 (747)
6073 .++...- ......+.+.++++.++.++. +
6074 T Consensus 205 ~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~ 233 (459)
6075 T 6BW9_A 205 SYLTDAG--------------------------------------------------NEQIQMVIDSGIVPHLVPLLS-H 233 (459)
6076 T ss_dssp HHHHTSC--------------------------------------------------HHHHHHHHHTTCHHHHGGGGG-C
6077 T ss_pred HHHhhcC--------------------------------------------------hHHHHHHHhCChHHHHHHHcC-C
6078 Confidence 3322100 001112244567788888887 4
6079
6080
6081 Q NP_000290.2 560 KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVF 637 (747)
6082 Q Consensus 560 ~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI 637 (747)
6083 .++.++..++.+|.+++...+. ....+.+.++++.+..++.+.++.++..++.+|.+++... .. ......+++
6084 T Consensus 234 ~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~ 308 (459)
6085 T 6BW9_A 234 QEVKVQTAALRAVGNIVTGTDE-----QTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLV 308 (459)
6086 T ss_dssp SSHHHHHHHHHHHHHHTTSCHH-----HHHHHHTTTGGGGCHHHHTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCH
6087 T ss_pred CCHHHHHHHHHHHHHHHcCCHH-----HHHHHhcccchhcHHHHhhCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHCCHH
6088 Confidence 6778888999999999875332 2233344578888888888888889999999999998662 22 233445677
6089
6090
6091 Q NP_000290.2 638 PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQ-PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
6092 Q Consensus 638 ~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s-~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
6093 +.+..++.+ .++.++..++.+|.+++... ......+.+.++++.|..++.+. ++.++..++.+|.+++...+
6094 T Consensus 309 ~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~a~~~l~~l~~~~~ 381 (459)
6095 T 6BW9_A 309 PMIIHLLDK------GDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVK-DAQVVQVVLDGLSNILKMAE 381 (459)
6096 T ss_dssp HHHHHHHHH------SCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHGGGGCS-CHHHHHHHHHHHHHHHHHCT
6097 T ss_pred HHHHHHHHh------CCHHHHHHHHHHHHHHHHhCCHHHHHHHHHCCcHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHhH
6098 Confidence 888888776 36778899999999998532 22333444456788888888766 77889999999999876544
6099
6100
6101 No 73
6102 >5D5K_C Importin subunit alpha-1, Poly [ADP-ribose]; PARP-2 NLS, PARP-2, poly(ADP-ribose)polymerase-2, Importin; 1.9A {Mus musculus}
6103 Probab=97.66 E-value=2e-08 Score=101.26 Aligned_cols=364 Identities=17% Similarity=0.188 Sum_probs=216.7 Template_Neff=13.100
6104
6105 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
6106 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
6107 +++.++..+. ..++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++.........
6108 T Consensus 57 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 136 (466)
6109 T 5D5K_C 57 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 136 (466)
6110 T ss_dssp HHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHH
6111 T ss_pred cHHHHHHHhhCCCChHHHHHHHHHHHHHcCCChHHHHHHhccchHHHHHHHhcCCCCcHHHHHHHHHHHHhcCCHHHHHH
6112 Confidence 4555666665 345678888889998887654433334444567778888888777888999999999988654433333
6113
6114
6115 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAE-----IQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
6116 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~e-----Vr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
6117 +...++++.+...+. ..+.. ++..++.++..++.......... .++++.+..++..
6118 T Consensus 137 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 199 (466)
6119 T 5D5K_C 137 VIKHGAIDPLLALLA-VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH---------------- 199 (466)
6120 T ss_dssp HHHTTCHHHHHHTTC-SSCGGGSCHHHHHHHHHHHHHHSCCCSSCCCHHHHHHHHHHHHHHTTS----------------
6121 T ss_pred HHHCCcHHHHHHHhh-CCCcccccHHHHHHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHHcC----------------
6122 Confidence 334456677777775 33333 77788888888876433222221 2455666666542
6123
6124
6125 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
6126 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
6127 .|+++...+..++..-.... + .....+ --.+++..|...+.. .+..-...+..
6128 T Consensus 200 ~~~~~~~~a~~~l~~l~~~~------~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~ 252 (466)
6129 T 5D5K_C 200 NDPEVLADSCWAISYLTDGP------N--------------ERIEMV-VKKGVVPQLVKLLGA------TELPIVTPALR 252 (466)
6130 T ss_dssp SCHHHHHHHHHHHHHHTSSC------H--------------HHHHHH-HTTTCHHHHHHHHTC------SCHHHHHHHHH
6131 T ss_pred CCHHHHHHHHHHHHHHhcCC------c--------------hHHHHH-HHCChHHHHHHHhcC------CCchHHHHHHH
6132 Confidence 13444444444443211100 0 000000 012233333333221 11112222333
6133
6134
6135 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
6136 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
6137 .|.++.... ......+.+.++++.++.++.
6138 T Consensus 253 ~l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 282 (466)
6139 T 5D5K_C 253 AIGNIVTGT--------------------------------------------------DEQTQKVIDAGALAVFPSLLT 282 (466)
6140 T ss_dssp HHHHHTTSC--------------------------------------------------HHHHHHHHHTTGGGGHHHHTT
6141 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHHccChhHhHHHHhh
6142 Confidence 333332100 001112245567888888887
6143
6144
6145 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGN 634 (747)
6146 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~ 634 (747)
6147 +.++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...
6148 T Consensus 283 -~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~ 356 (466)
6149 T 5D5K_C 283 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC 356 (466)
6150 T ss_dssp -CSSHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHT
6151 T ss_pred -CCCHHHHHHHHHHHHHHHcCCHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhC
6152 Confidence 46778888999999999875332 233334557888899988888888999999999999875 2 22 233445
6153
6154
6155 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS------QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
6156 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~------s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
6157 ++++.+..++.+ .++.++..++.+|.+++.. .......+.+.++++.+..++.+. ++.++..++.++
6158 T Consensus 357 ~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l 429 (466)
6159 T 5D5K_C 357 GIIEPLMNLLSA------KDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE-NESVYKASLNLI 429 (466)
6160 T ss_dssp TCHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTHHHHHHHGGGCS-SHHHHHHHHHHH
6161 T ss_pred CcHHHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHcCHHHHHHHHHhCC-cHHHHHHHHHHH
6162 Confidence 577788888776 3678889999999999862 122333344456778888888766 788999999999
6163
6164
6165 Q NP_000290.2 709 SDMWSSKE 716 (747)
6166 Q Consensus 709 snL~~~~~ 716 (747)
6167 .+++...+
6168 T Consensus 430 ~~l~~~~~ 437 (466)
6169 T 5D5K_C 430 EKYFSVEE 437 (466)
6170 T ss_dssp HHHC----
6171 T ss_pred HHhccCCc
6172 Confidence 99887543
6173
6174
6175 No 74
6176 >4UAF_B Importin alpha 1 import receptor; importin karyopherin complex NLS, PROTEIN; HET: PO4; 1.698A {Mus musculus}
6177 Probab=97.63 E-value=2.4e-08 Score=100.65 Aligned_cols=364 Identities=17% Similarity=0.187 Sum_probs=219.0 Template_Neff=13.100
6178
6179 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
6180 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
6181 +++.++..+. ..++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++.........
6182 T Consensus 57 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 136 (466)
6183 T 4UAF_B 57 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 136 (466)
6184 T ss_pred cHHHHHHHhhCCCChHHHHHHHHHHHHHhcCChHHHHHHHccChHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHH
6185 Confidence 4555666665 345678888888998887654433334444567778888888777888999999999988654433333
6186
6187
6188 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAE-----IQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
6189 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~e-----Vr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
6190 +...++++.+...+. ..... ++..++.++..++.......... .++++.+..++..
6191 T Consensus 137 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 199 (466)
6192 T 4UAF_B 137 VIKHGAIDPLLALLA-VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH---------------- 199 (466)
6193 T ss_pred HHHCCcHHHHHHHhh-CCCcccccHHHHHHHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHcC----------------
6194 Confidence 334456677777775 33333 77788888888876433222221 2555666666542
6195
6196
6197 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
6198 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
6199 .|+++...+..++..-... .+ .....+ --.+++..|...+.. .+..-...+..
6200 T Consensus 200 ~~~~~~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~ 252 (466)
6201 T 4UAF_B 200 NDPEVLADSCWAISYLTDG------PN--------------ERIEMV-VKKGVVPQLVKLLGA------TELPIVTPALR 252 (466)
6202 T ss_pred CCHHHHHHHHHHHHHHhcC------Cc--------------HHHHHH-HHCChHHHHHHHhcC------CChhHHHHHHH
6203 Confidence 1344544444444321100 00 000000 012233333333221 11112222233
6204
6205
6206 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
6207 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
6208 .|.++.... ......+.+.++++.+..++.
6209 T Consensus 253 ~l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 282 (466)
6210 T 4UAF_B 253 AIGNIVTGT--------------------------------------------------DEQTQKVIDAGALAVFPSLLT 282 (466)
6211 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHhccCHHHHHHHHhc
6212 Confidence 333332100 001112245567888888887
6213
6214
6215 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGN 634 (747)
6216 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~ 634 (747)
6217 +.++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...
6218 T Consensus 283 -~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~ 356 (466)
6219 T 4UAF_B 283 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC 356 (466)
6220 T ss_pred -CCCHHHHHHHHHHHHHHhcCCHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhC
6221 Confidence 46778888999999999875332 233334557888899998888888999999999999875 2 22 233445
6222
6223
6224 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS------QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
6225 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~------s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
6226 ++++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.++
6227 T Consensus 357 ~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l 429 (466)
6228 T 4UAF_B 357 GIIEPLMNLLSA------KDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE-NESVYKASLNLI 429 (466)
6229 T ss_pred CcHHHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHHHH
6230 Confidence 577788888776 3678889999999999862 122333344456778888888766 788999999999
6231
6232
6233 Q NP_000290.2 709 SDMWSSKE 716 (747)
6234 Q Consensus 709 snL~~~~~ 716 (747)
6235 .+++...+
6236 T Consensus 430 ~~l~~~~~ 437 (466)
6237 T 4UAF_B 430 EKYFSVEE 437 (466)
6238 T ss_pred HHHccCCc
6239 Confidence 99887543
6240
6241
6242 No 75
6243 >3L6X_A Catenin delta-1, E-cadherin; p120, catenin, cadherin, E-cadherin, armadillo; HET: SO4; 2.4A {Homo sapiens}
6244 Probab=97.63 E-value=2.7e-08 Score=108.38 Aligned_cols=364 Identities=16% Similarity=0.179 Sum_probs=198.9 Template_Neff=11.000
6245
6246 Q NP_000290.2 263 AIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTG 342 (747)
6247 Q Consensus 263 ~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~ 342 (747)
6248 ..++.+|..+....+. ...+..+.++.++.++...++.++..++.+|..++.........+...++++.|+.++. ..
6249 T Consensus 26 ~~~l~~L~~l~~~~~~--~~~~~~~~l~~li~~L~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~g~i~~Lv~lL~-~~ 102 (584)
6250 T 3L6X_A 26 RGSLASLDSLRKGGPP--PPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLD-HP 102 (584)
6251 T ss_dssp --------------CC--CCCCCCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGG-CS
6252 T ss_pred cCchHHHHHHhcCCCC--CCcccCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCCcHHHHHHHhh-CC
6253 Confidence 3445555555443221 11233467778888887777888999999999988544444444455567888888887 56
6254
6255
6256 Q NP_000290.2 343 NAEIQKQLTGLLWNLSS--TDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMREL 419 (747)
6257 Q Consensus 343 d~eVr~~AL~aLsnLas--~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (747)
6258 ++.++..++.+|.+++. .......+.. ++++.|+.+|... .|+++-..+.++|..
6259 T Consensus 103 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~i~~L~~ll~~~---------------~~~~v~~~a~~~L~~------- 160 (584)
6260 T 3L6X_A 103 KKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKA---------------RDMDLTEVITGTLWN------- 160 (584)
6261 T ss_dssp SHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHC---------------CSHHHHHHHHHHHHH-------
6262 T ss_pred CHHHHHHHHHHHHHHhcCCCHHHHHHHHcCChHHHHHHHHHHc---------------CCHHHHHHHHHHHHH-------
6263 Confidence 67899999999999987 3344444444 7888888888731 134444455555432
6264
6265
6266 Q NP_000290.2 420 LALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEY 499 (747)
6267 Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (747)
6268 |++.+..+..+... .+..|...+........ ...+ +.. .+.
6269 T Consensus 161 --------------L~~~~~~~~~l~~~--~l~~L~~~l~~~~~~~~---~~~~---------------~~~----~~~- 201 (584)
6270 T 3L6X_A 161 --------------LSSHDSIKMEIVDH--ALHALTDEVIIPHSGWE---REPN---------------EDC----KPR- 201 (584)
6271 T ss_dssp --------------HTTSGGGHHHHHHH--THHHCCCCCCHHHHCCC---------------------------------
6272 T ss_pred --------------HhcCHHHHHHHHHH--HHHHHHHhccccCCCCC---CCCC---------------cCC----CCc-
6273 Confidence 11111122222211 22233322221110000 0000 000 000
6274
6275
6276 Q NP_000290.2 500 NARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYH-SDAIRTYLNLMGK-----SKKDATLEACAGALQ 573 (747)
6277 Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve-~G~I~~LL~LL~s-----s~d~eVr~~AL~aL~ 573 (747)
6278 ...+........+|+.|-+. .+......+.+ .++++.|+.++.. ..+..++..++.+|.
6279 T Consensus 202 ~~~~~~v~~~a~~~L~~l~~---------------~~~~~~~~l~~~~g~v~~L~~~l~~~~~~~~~~~~~~~~a~~~L~ 266 (584)
6280 T 3L6X_A 202 HIEWESVLTNTAGCLRNVSS---------------ERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLR 266 (584)
6281 T ss_dssp CCCCHHHHHHHHHHHHHHTS---------------SCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHH
6282 T ss_pred ccChHHHHHHHHHHHHHHhc---------------CCHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
6283 Confidence 00000111112222222211 00011111223 4667888887762 125667778888888
6284
6285
6286 Q NP_000290.2 574 NLTASKGLMS--------------------SGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRH-----PL 627 (747)
6287 Q Consensus 574 nLs~~s~~~s--------------------~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~-----~e 627 (747)
6288 +++....... .......+.+.++++.|+.++... ++.++..++.+|.+|+.. ..
6289 T Consensus 267 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~~~~~~~~~a~~~L~~L~~~~~~~~~~ 346 (584)
6290 T 3L6X_A 267 NLSYQVHREIPQAERYQEAAPNVANNTGTSPARGYELLFQPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRY 346 (584)
6291 T ss_dssp HHHTTHHHHSTTCCC--------------CCCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHH
6292 T ss_pred HHHhhhhccChhHHHHHHhcCcCCCCCCCCChhhhhHhhChhHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccCCHH
6293 Confidence 8876421000 000122334568888899988875 788999999999999874 22
6294
6295
6296 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA-------SPK 699 (747)
6297 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~-------d~e 699 (747)
6298 . ..+...++++.|+.++.. .+..++..++++|.+|+.. +.....+. .++++.|+.++.... +..
6299 T Consensus 347 ~~~~~~~~~~l~~L~~ll~~------~~~~v~~~a~~~L~~L~~~-~~~~~~l~-~~~l~~L~~~L~~~~~~~~~~~~~~ 418 (584)
6300 T 3L6X_A 347 IRSALRQEKALSAIADLLTN------EHERVVKAASGALRNLAVD-ARNKELIG-KHAIPNLVKNLPGGQQNSSWNFSED 418 (584)
6301 T ss_dssp HHHHHTSHHHHHHHHHGGGC------SCHHHHHHHHHHHHHHHTT-CSCHHHHH-HHHHHHHHHTSSSSSCSGGGTCCHH
6302 T ss_pred HHHHHHHcChHHHHHHHhcC------CCHHHHHHHHHHHHHHhcC-hHHHHHHH-cchHHHHHHcCCCCCCCCCcCCCHH
6303 Confidence 2 233456788888888876 3678899999999999875 44444443 467888888776431 234
6304
6305
6306 Q NP_000290.2 700 AAEAARLLLSDMWS 713 (747)
6307 Q Consensus 700 Vr~aAL~aLsnL~~ 713 (747)
6308 ++..++.+|.+++.
6309 T Consensus 419 ~~~~~l~~L~~l~~ 432 (584)
6310 T 3L6X_A 419 TVISILNTINEVIA 432 (584)
6311 T ss_dssp HHHHHHHHHHHHHT
6312 T ss_pred HHHHHHHHHHHHHh
6313 Confidence 46778888888773
6314
6315
6316 No 76
6317 >4U5L_A deltaIBB-importin-alpha1; TPX2, inhibitor, TRANSPORT PROTEIN; HET: 3D6; 2.53A {Mus musculus}
6318 Probab=97.60 E-value=2.9e-08 Score=98.47 Aligned_cols=367 Identities=14% Similarity=0.181 Sum_probs=226.7 Template_Neff=13.200
6319
6320 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNK 322 (747)
6321 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
6322 ..++.+...+.+.++.++..++..+..+...... ....+...++++.+...+. ..++.++..++.++..++.......
6323 T Consensus 5 ~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~ 84 (426)
6324 T 4U5L_A 5 WSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQT 84 (426)
6325 T ss_dssp CCHHHHHHHHTSSCHHHHHHHHHHHHHHHHCSSCCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHH
6326 T ss_pred ccHHHHHhhccCCCHHHHHHHHHHHHHHHhcCCCccHHHHHHcCcHHHHHHHhccCCChHHHHHHHHHHHHHhCCCHHHH
6327 Confidence 4556667777777888889999999888764322 1222333456777777776 4456788889999988876544333
6328
6329
6330 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDP 400 (747)
6331 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~ 400 (747)
6332 ..+...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++..... +..++
6333 T Consensus 85 ~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----------~~~~~ 152 (426)
6334 T 4U5L_A 85 KAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDL-----------STLAC 152 (426)
6335 T ss_dssp HHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTTCSSCG-----------GGSCH
6336 T ss_pred HHHHhcCcHHHHHHHhc-CCChHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhhCCCC-----------chhhH
6337 Confidence 33344467777888776 5677888999999999887543 2223333 677777777764211 11122
6338
6339
6340 Q NP_000290.2 401 EVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
6341 Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
6342 ++...+..++..- ..............+++..+...++. .+..-...+...|.
6343 T Consensus 153 ~~~~~~~~~l~~l---------------------~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~ 205 (426)
6344 T 4U5L_A 153 GYLRNLTWTLSNL---------------------CRNKNPAPPLDAVEQILPTLVRLLHH------NDPEVLADSCWAIS 205 (426)
6345 T ss_dssp HHHHHHHHHHHHH---------------------TCCCSSCCCHHHHHHHHHHHHHHTTS------SCHHHHHHHHHHHH
6346 T ss_pred HHHHHHHHHHHHH---------------------HcCCCCCCCccHHHHHHHHHHHHHhC------CCHHHHHHHHHHHH
6347 Confidence 2333333222211 11111111111113344444333321 11122222222232
6348
6349
6350 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
6351 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
6352 ++...-. .....+.+.++++.++.++. +.
6353 T Consensus 206 ~l~~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~ 234 (426)
6354 T 4U5L_A 206 YLTDGPN--------------------------------------------------ERIEMVVKKGVVPQLVKLLG-AT 234 (426)
6355 T ss_dssp HHTSSCH--------------------------------------------------HHHHHHHTTTCHHHHHHHHT-CS
6356 T ss_pred HHhhCCc--------------------------------------------------HHHHHHhhcChHHHHHHHhc-CC
6357 Confidence 2221100 00111234567888888887 46
6358
6359
6360 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFP 638 (747)
6361 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~ 638 (747)
6362 ++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. +.. ..+...++++
6363 T Consensus 235 ~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~ 309 (426)
6364 T 4U5L_A 235 ELPIVTPALRAIGNIVTGTDE-----QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP 309 (426)
6365 T ss_dssp CHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHH
6366 T ss_pred CccHHHHHHHHHHHHhcCCHH-----HHHHHhccchHHHHHHHhcCCChHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHH
6367 Confidence 778888999999999875332 233334567888999999888889999999999999875 222 2334456778
6368
6369
6370 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
6371 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
6372 .+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|.+++.
6373 T Consensus 310 ~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~ 378 (426)
6374 T 4U5L_A 310 FLVGVLSK------ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK-DTKIIQVILDAISNIFQ 378 (426)
6375 T ss_dssp HHHHHHHS------SCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGSC-CHHHHHHHHHHHHHHHH
6376 T ss_pred HHHHHhcC------CCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCcHHHHHHHhcCC-CHHHHHHHHHHHHHHHH
6377 Confidence 88888876 3678889999999999874 233334455556788888888876 78899999999999976
6378
6379
6380 No 77
6381 >4MZ6_E Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial, Importin; ARM repeat, protein transport, Importin; 1.88A {Mus musculus}
6382 Probab=97.58 E-value=3.4e-08 Score=101.56 Aligned_cols=364 Identities=17% Similarity=0.184 Sum_probs=217.7 Template_Neff=12.800
6383
6384 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
6385 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
6386 +++.+...+.+. ++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++.........
6387 T Consensus 101 ~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 180 (509)
6388 T 4MZ6_E 101 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 180 (509)
6389 T ss_dssp HHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHH
6390 T ss_pred cHHHHHHHhcCCCChHHHHHHHHHHHHHhCCCHHHHHHHHhcChHHHHHHHhcCCChhHHHHHHHHHHHHhCCCHHHHHH
6391 Confidence 455566666543 3678888889988887654443334444567788888888777888999999999888654433333
6392
6393
6394 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAE-----IQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
6395 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~e-----Vr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
6396 +...++++.+...+. ..... ++..++.++..++.......... .++++.+..++..
6397 T Consensus 181 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 243 (509)
6398 T 4MZ6_E 181 VIKHGAIDPLLALLA-VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH---------------- 243 (509)
6399 T ss_dssp HHHTTCHHHHHHHTC-SSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTC----------------
6400 T ss_pred HHHCCcHHHHHHHHh-CCChhhhhHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhC----------------
6401 Confidence 334456677777775 33333 77788888888876432221111 2556666666542
6402
6403
6404 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
6405 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
6406 .++++...+..++..-.... + .....+ --.+++..|...++. .+..-...+..
6407 T Consensus 244 ~~~~v~~~a~~~l~~l~~~~------~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~ 296 (509)
6408 T 4MZ6_E 244 NDPEVLADSCWAISYLTDGP------N--------------ERIEMV-VKKGVVPQLVKLLGA------TELPIVTPALR 296 (509)
6409 T ss_dssp SCHHHHHHHHHHHHHHTSSS------H--------------HHHHHH-HTTTCHHHHHHHHTC------SCHHHHHHHHH
6410 T ss_pred CCHHHHHHHHHHHHHHhcCC------h--------------HHHHHH-hhCChHHHHHHHhcC------CCcchHHHHHH
6411 Confidence 13444444444443211100 0 000000 012233333333321 11112222333
6412
6413
6414 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
6415 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
6416 +|.++.... ......+.+.++++.|..++.
6417 T Consensus 297 ~L~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 326 (509)
6418 T 4MZ6_E 297 AIGNIVTGT--------------------------------------------------DEQTQKVIDAGALAVFPSLLT 326 (509)
6419 T ss_dssp HHHHHTTSC--------------------------------------------------HHHHHHHHHTTGGGGHHHHTT
6420 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHHhCChHHHHHHHhh
6421 Confidence 333322100 001112245567788888887
6422
6423
6424 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGN 634 (747)
6425 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~ 634 (747)
6426 +.++.++..++.+|.+++...+. ....+...++++.|+.++.+.++.++..++.+|.+++.. ... ..+...
6427 T Consensus 327 -~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~ 400 (509)
6428 T 4MZ6_E 327 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC 400 (509)
6429 T ss_dssp -CSSHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHT
6430 T ss_pred -CCCHHHHHHHHHHHHHHhcCCHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhC
6431 Confidence 46778888999999998875332 233334557888888888888888999999999999875 222 233445
6432
6433
6434 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS------QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
6435 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~------s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
6436 ++++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|
6437 T Consensus 401 ~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l 473 (509)
6438 T 4MZ6_E 401 GIIEPLMNLLSA------KDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE-NESVYKASLNLI 473 (509)
6439 T ss_dssp TCHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTHHHHHHHHTTCS-SHHHHHHHHHHH
6440 T ss_pred CCHHHHHHHHhC------CCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHHHH
6441 Confidence 577888888776 3678888999999998862 123333344456788888888776 788999999999
6442
6443
6444 Q NP_000290.2 709 SDMWSSKE 716 (747)
6445 Q Consensus 709 snL~~~~~ 716 (747)
6446 ..+....+
6447 T Consensus 474 ~~l~~~~~ 481 (509)
6448 T 4MZ6_E 474 EKYFSVEE 481 (509)
6449 T ss_dssp HHHCC---
6450 T ss_pred HHHCCCCc
6451 Confidence 99886543
6452
6453
6454 No 78
6455 >5UMZ_B Importin subunit alpha-1, TNRC6A; mRNA decay, miRNA ARM repeat; HET: GOL; 1.9A {Mus musculus}
6456 Probab=97.58 E-value=3.4e-08 Score=101.56 Aligned_cols=364 Identities=17% Similarity=0.184 Sum_probs=219.0 Template_Neff=12.800
6457
6458 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
6459 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
6460 +++.+...+.+. ++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++.........
6461 T Consensus 101 ~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 180 (509)
6462 T 5UMZ_B 101 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 180 (509)
6463 T ss_dssp CHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHTCHHHHHH
6464 T ss_pred cHHHHHHHhcCCCChHHHHHHHHHHHHHhCCCHHHHHHHHhcChHHHHHHHhcCCChhHHHHHHHHHHHHhCCCHHHHHH
6465 Confidence 455566666543 3678888889988887654443334444567788888888777888999999999888654433333
6466
6467
6468 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAE-----IQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
6469 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~e-----Vr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
6470 +...++++.+...+. ..... ++..++.++..++.......... .++++.+..++..
6471 T Consensus 181 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 243 (509)
6472 T 5UMZ_B 181 VIKHGAIDPLLALLA-VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH---------------- 243 (509)
6473 T ss_dssp HHHTTCHHHHHHHTC-SSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTS----------------
6474 T ss_pred HHHCCcHHHHHHHHh-CCChhhhhHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhC----------------
6475 Confidence 334456677777775 33333 77788888888876432221111 2556666666542
6476
6477
6478 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
6479 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
6480 .++++...+..++..-.... + .....+ --.+++..|...++. .+..-...+..
6481 T Consensus 244 ~~~~v~~~a~~~l~~l~~~~------~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~ 296 (509)
6482 T 5UMZ_B 244 NDPEVLADSCWAISYLTDGP------N--------------ERIEMV-VKKGVVPQLVKLLGA------TELPIVTPALR 296 (509)
6483 T ss_dssp SCHHHHHHHHHHHHHHTSSC------H--------------HHHHHH-HTTTCHHHHHHHHTC------SCHHHHHHHHH
6484 T ss_pred CCHHHHHHHHHHHHHHhcCC------h--------------HHHHHH-hhCChHHHHHHHhcC------CCcchHHHHHH
6485 Confidence 13444444444443211100 0 000000 012233333333321 11112222333
6486
6487
6488 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
6489 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
6490 +|.++.... ......+.+.++++.|..++.
6491 T Consensus 297 ~L~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 326 (509)
6492 T 5UMZ_B 297 AIGNIVTGT--------------------------------------------------DEQTQKVIDAGALAVFPSLLT 326 (509)
6493 T ss_dssp HHHHHTTSC--------------------------------------------------HHHHHHHHHTTGGGGHHHHTT
6494 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHHhCChHHHHHHHhh
6495 Confidence 333322100 001112245567788888887
6496
6497
6498 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGN 634 (747)
6499 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~ 634 (747)
6500 +.++.++..++.+|.+++...+. ....+...++++.|+.++.+.++.++..++.+|.+++.. ... ..+...
6501 T Consensus 327 -~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~ 400 (509)
6502 T 5UMZ_B 327 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC 400 (509)
6503 T ss_dssp -CSSHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHT
6504 T ss_pred -CCCHHHHHHHHHHHHHHhcCCHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhC
6505 Confidence 46778888999999998875332 233334557888888888888888999999999999875 222 233445
6506
6507
6508 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS------QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
6509 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~------s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
6510 ++++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|
6511 T Consensus 401 ~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l 473 (509)
6512 T 5UMZ_B 401 GIIEPLMNLLSA------KDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE-NESVYKASLNLI 473 (509)
6513 T ss_dssp TCHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTHHHHHHHHHTCS-CHHHHHHHHHHH
6514 T ss_pred CCHHHHHHHHhC------CCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHHHH
6515 Confidence 577888888776 3678888999999998862 123333344456788888888776 788999999999
6516
6517
6518 Q NP_000290.2 709 SDMWSSKE 716 (747)
6519 Q Consensus 709 snL~~~~~ 716 (747)
6520 ..+....+
6521 T Consensus 474 ~~l~~~~~ 481 (509)
6522 T 5UMZ_B 474 EKYFSVEE 481 (509)
6523 T ss_dssp HHHCCCCC
6524 T ss_pred HHHCCCCc
6525 Confidence 99886543
6526
6527
6528 No 79
6529 >5ZHX_D Rap1 GTPase-GDP dissociation stimulator 1; armadillo GEF chaperone, ONCOPROTEIN; HET: FAR; 3.5A {Homo sapiens}
6530 Probab=97.57 E-value=3.6e-08 Score=99.74 Aligned_cols=332 Identities=20% Similarity=0.193 Sum_probs=197.3 Template_Neff=13.200
6531
6532 Q NP_000290.2 282 QVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTG--NAEIQKQLTGLLWNLSS 359 (747)
6533 Q Consensus 282 ~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~--d~eVr~~AL~aLsnLas 359 (747)
6534 .+...++++.+...+.+.++.++..++.++..++...+.....+...++++.+...+. .. ++.++..++.++..++.
6535 T Consensus 13 ~l~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~-~~~~~~~v~~~a~~~l~~l~~ 91 (487)
6536 T 5ZHX_D 13 PCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLG-IHCQNAALTEMCLVAFGNLAE 91 (487)
6537 T ss_dssp ---CHHHHHHHHHHTTCSCHHHHHHHHHHHHTTSTTCHHHHHHHHHTTCHHHHHHHHH-HTSSCSHHHHHHHHHHHHHTT
6538 T ss_pred HHhhcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHHc-ccCCCHHHHHHHHHHHHHHHc
6539 Confidence 3444567778888888778889999999999988654443334444567788888886 43 67888899999999887
6540
6541
6542 Q NP_000290.2 360 TDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSAD 438 (747)
6543 Q Consensus 360 ~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (747)
6544 .......+.. ++++.|+.++.... ++++-..+..+|..- ...+
6545 T Consensus 92 ~~~~~~~~~~~~~~~~l~~~l~~~~---------------~~~~~~~a~~~l~~l---------------------~~~~ 135 (487)
6546 T 5ZHX_D 92 LESSKEQFASTNIAEELVKLFKKQI---------------EHDKREMIFEVLAPL---------------------AEND 135 (487)
6547 T ss_dssp SSHHHHHHHHTTHHHHHHHHHHHCC---------------SHHHHHHHHHHHHHH---------------------HTSH
6548 T ss_pred chhHHHHHhhCCHHHHHHHHHHhcc---------------ChHHHHHHHHHHHHH---------------------hcCH
6549 Confidence 6443333333 67777777776431 333333333333211 1111
6550
6551
6552 Q NP_000290.2 439 AGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKS 518 (747)
6553 Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (747)
6554 ..+..+. ..|.++.|+..+... ++.........+..... .+.+..
6555 T Consensus 136 ~~~~~~~-~~~~~~~l~~~l~~~------~~~~~~~~~~~l~~~~~----------------------------~~~~~~ 180 (487)
6556 T 5ZHX_D 136 AIKLQLV-EAGLVECLLEIVQQK------VDSDKEDDITELKTGSD----------------------------LMVLLL 180 (487)
6557 T ss_dssp HHHHHHH-HHTHHHHHHHHHHHT------SSCCCHHHHHHHHHHHH----------------------------HHHHHT
6558 T ss_pred HHHHHHH-HCCHHHHHHHHHHhc------CCCCCHHHHHHHHHHHH----------------------------HHHHHH
6559 Confidence 1111111 123444444433321 11111111111110000 000000
6560
6561
6562 Q NP_000290.2 519 DKMMNNNYDCPLPEEETNPKGSGWLYHSD---AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEK 595 (747)
6563 Q Consensus 519 ~~~~~~~~~~~~~~~~~ni~~~~~lve~G---~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~g 595 (747)
6564 .+ .+. ...+...+ .++.++.++. +.++.++..++.+|.+++.... ....+.+.+
6565 T Consensus 181 ----~~---------~~~---~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~------~~~~~~~~~ 237 (487)
6566 T 5ZHX_D 181 ----LG---------DES---MQKLFEGGKGSVFQRVLSWIP-SNNHQLQLAGALAIANFARNDA------NCIHMVDNG 237 (487)
6567 T ss_dssp ----TS---------HHH---HHHHSSSSSSSHHHHHHTTTT-SSCHHHHHHHHHHHHHHCCSHH------HHHHHHTTT
6568 T ss_pred ----hc---------cHH---HHHHhhCCCchHHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCch------HHHHHHhcC
6569 Confidence 00 000 01112222 6777888887 4677888899999999987432 133345567
6570
6571
6572 Q NP_000290.2 596 GLPQIARLLQ----SGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
6573 Q Consensus 596 iI~~Ll~LL~----s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
6574 +++.++.++. +.+..++..++.+|.+++..... ..+...++++.+..++.+ .++.++..++++|.+++.
6575 T Consensus 238 ~~~~l~~~l~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~ 311 (487)
6576 T 5ZHX_D 238 IVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKS------EMPPVQFKLLGTLRMLID 311 (487)
6577 T ss_dssp HHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHTCSHHHHHHHHHHTHHHHHHTTSSC------CCHHHHHHHHHHHHHHTS
6578 T ss_pred HHHHHHHHHHhcccCCCHHHHHHHHHHHHHhcCChhhHHHHHHcChHHHHHHHHhC------CCHHHHHHHHHHHHHHHh
6579 Confidence 8888888887 56788899999999999876433 233445677888888876 367889999999999987
6580
6581
6582 Q NP_000290.2 671 SQPQLAKQYF-SSSMLNNIINLCRSSASP-KAAEAARLLLSDMWSSK 715 (747)
6583 Q Consensus 671 ~s~e~~~~Lv-e~giL~~Ll~LL~s~~d~-eVr~aAL~aLsnL~~~~ 715 (747)
6584 ..+.....+. ..++++.++.++.+. +. .++..++.+|.+++...
6585 T Consensus 312 ~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~a~~~l~~l~~~~ 357 (487)
6586 T 5ZHX_D 312 AQAEAAEQLGKNVKLVERLVEWCEAK-DHAGVMGESNRLLSALIRHS 357 (487)
6587 T ss_dssp SCHHHHHHHHHCHHHHHHHHHHHTCC-SCCHHHHHHHHHHHHHHHHH
6588 T ss_pred hcHHHHHHhccccCHHHHHHHHHHhc-CchhhHHHHHHHHHHHHHHh
6589 Confidence 5433333333 245678888888765 44 78888999999986544
6590
6591
6592 No 80
6593 >3NOW_A SD10334p; Armadillo Repeat, Hsp90, Myosin, Tetra-tricopeptide; 2.992A {Drosophila melanogaster}
6594 Probab=97.57 E-value=3.6e-08 Score=107.84 Aligned_cols=135 Identities=17% Similarity=0.118 Sum_probs=82.7 Template_Neff=12.800
6595
6596 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
6597 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
6598 ..+++.+...+.+.++.++..++.++..+... .... .....++++.+...+.+.+..++..++.++..+.........
6599 T Consensus 289 ~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~-~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~ 366 (810)
6600 T 3NOW_A 289 EGILQMILAMATTDDELQQRVACECLIAASSK-KDKA-KALCEQGVDILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAA 366 (810)
6601 T ss_dssp TTHHHHHHHHHHSSCHHHHHHHHHHHHHHTTS-HHHH-HTTHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTTTTTTS
6602 T ss_pred cChHHHHHHHccCCCHHHHHHHHHHHHHHhCC-HHHH-HHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHHccCCcccc
6603 Confidence 44556666677777788899999999888764 2111 122235677777777777788888999999888764332111
6604
6605
6606 Q NP_000290.2 324 ET-RRQNGIREAVSLLRR-----TGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVI 380 (747)
6607 Q Consensus 324 ~l-l~~~IL~~Ll~lL~s-----s~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~ 380 (747)
6608 .. ...+.++.+...+.. +.++.++..++.++..++........+.. ++++.+..++.
6609 T Consensus 367 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 431 (810)
6610 T 3NOW_A 367 IRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDLAR 431 (810)
6611 T ss_dssp CCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHH
6612 T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHcCCHHHHHHHHhChHHHHHHHHHHc
6613 Confidence 11 122344445544431 24567888889999888765433333322 46666666665
6614
6615
6616 No 81
6617 >4EV8_A Catenin beta-1; mouse catenin, CELL ADHESION; HET: URE; 1.9A {Mus musculus}
6618 Probab=97.55 E-value=4.1e-08 Score=100.94 Aligned_cols=137 Identities=25% Similarity=0.276 Sum_probs=86.1 Template_Neff=13.100
6619
6620 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR--SPNQNVQQAAAGALRNLVFRSTTN- 321 (747)
6621 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~--s~d~eVr~~AL~aLs~La~~~~~~- 321 (747)
6622 .+++.+...+.+.+..++..++.++..+..........+...+.++.+...+. ..++.++..++.++..++......
6623 T Consensus 267 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~ 346 (538)
6624 T 4EV8_A 267 GLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAE 346 (538)
6625 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCCChH
6626 Confidence 34555666666666778888888888886544433333344556667776665 445677888888888887644321
6627
6628
6629 Q NP_000290.2 322 --KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVII 381 (747)
6630 Q Consensus 322 --~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
6631 .......++++.+...+....++.++..++.++..++........+.. ++++.|..++..
6632 T Consensus 347 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~ 409 (538)
6633 T 4EV8_A 347 MAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVR 409 (538)
6634 T ss_pred HHHHHHHHCCHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHCChHHHHHHHHcC
6635 Confidence 112222356677777775223567888888999888875444433444 677777776653
6636
6637
6638 No 82
6639 >5Z8H_A Adenomatous polyposis coli protein, Peptide; APC, inhibitor, PROTEIN BINDING-INHIBITOR complex; HET: PHQ, GOL; 1.79A {Homo sapiens}
6640 Probab=97.54 E-value=4.4e-08 Score=95.72 Aligned_cols=161 Identities=21% Similarity=0.247 Sum_probs=120.5 Template_Neff=12.500
6641
6642 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK-EKGLPQIARLLQSGN----SDVVRSGASL 618 (747)
6643 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie-~giI~~Ll~LL~s~d----~eVr~~AL~a 618 (747)
6644 .+.++++.|+.++....++.++..++++|.+++...+. ....+.. .++++.++.++...+ ..++..++++
6645 T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 236 (339)
6646 T 5Z8H_A 162 REVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTE-----NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGI 236 (339)
6647 T ss_pred HHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHH-----HHHHHHHhcChHHHHHHHhcCCCCCCCHHHHHHHHHH
6648 Confidence 45678888888887325677888899999999874332 2334455 688888988887543 6788889999
6649
6650
6651 Q NP_000290.2 619 LSNMSR----HPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR 693 (747)
6652 Q Consensus 619 LsnLa~----~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~ 693 (747)
6653 |.+++. .+.. ..+...++++.++.++.. .++.++..++++|.+++...+.....+.+.++++.|..++.
6654 T Consensus 237 l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 310 (339)
6655 T 5Z8H_A 237 LRNVSSLIATNEDHRQILRENNCLQTLLQHLKS------HSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIH 310 (339)
6656 T ss_pred HHHHHHhhccCHHHHHHHHHCCHHHHHHHHHhC------CCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHhh
6657 Confidence 999873 2222 233445678888888866 36778999999999999844666666667788999999988
6658
6659
6660 Q NP_000290.2 694 SSASPKAAEAARLLLSDMWSSKE 716 (747)
6661 Q Consensus 694 s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
6662 +. ++.++..++.+|.+++...+
6663 T Consensus 311 ~~-~~~v~~~a~~~l~~l~~~~~ 332 (339)
6664 T 5Z8H_A 311 SK-HKMIAMGSAAALRNLMANRP 332 (339)
6665 T ss_pred CC-CHHHHHHHHHHHHHHHcCCc
6666 Confidence 76 78899999999999997654
6667
6668
6669 No 83
6670 >3SL9_B Catenin beta-1, B-cell CLL/lymphoma 9; Armadillo repeat, components of the; HET: GOL, EDO, PEG, IMD; 2.2A {Homo sapiens}
6671 Probab=97.53 E-value=4.8e-08 Score=84.82 Aligned_cols=134 Identities=16% Similarity=0.203 Sum_probs=89.6 Template_Neff=12.600
6672
6673 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQL-GGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
6674 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~-~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
6675 .+++.+...+.+.++.++..++.++.++..... ....+... ++++.+..++.. .+..++..++.++.+++.. ....
6676 T Consensus 13 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~-~~~~ 90 (167)
6677 T 3SL9_B 13 RAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA-SRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REGL 90 (167)
6678 T ss_pred CcHHHHHHHhCCCCHHHHHHHHHHHHHHccCHH-HHHHHHhCCchHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-HhHH
6679 Confidence 345566666666677788889999998876543 22223332 377778887776 6677888899999888843 3333
6680
6681
6682 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVII 381 (747)
6683 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~ 381 (747)
6684 ..+...+.++.+..++. ..++.++..++.++.+++........++. ++++.|+.++..
6685 T Consensus 91 ~~~~~~~~i~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 150 (167)
6686 T 3SL9_B 91 LAIFKSGGIPALVKMLG-SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK 150 (167)
6687 T ss_pred HHHHHCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHcCCHhHHHHHHHcCHHHHHHHHhcC
6688 Confidence 33444567778888886 55677888899999998875443333332 677777777654
6689
6690
6691 No 84
6692 >4E4V_A Importin subunit alpha-2; armadillo repeat, karyopherin, importin, nuclear; HET: GOL, DTT; 2.5283A {Homo sapiens}
6693 Probab=97.52 E-value=5e-08 Score=99.91 Aligned_cols=156 Identities=17% Similarity=0.216 Sum_probs=117.7 Template_Neff=12.700
6694
6695 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
6696 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
6697 .++++.++.++. +.++.++..++.+|.+++..... ....+...++++.+..++.+.++.++..++.+|.+++..
6698 T Consensus 206 ~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~ 279 (485)
6699 T 4E4V_A 206 EQILPTLVRLLH-HDDPEVLADTCWAISYLTDGPNE-----RIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTG 279 (485)
6700 T ss_dssp HHHHHHHHHHTT-SCCHHHHHHHHHHHHHHTSSCHH-----HHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTS
6701 T ss_pred hcHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCChH-----HhhHHhhCChHHHHHHHhcCCChHHHHHHHHHHHHHhcC
6702 Confidence 356777888887 46778888999999998875332 223334567888899999888888999999999999876
6703
6704
6705 Q NP_000290.2 626 P-LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
6706 Q Consensus 626 ~-e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
6707 . .. ......++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.|+.++.+. ++.++..
6708 T Consensus 280 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~ 352 (485)
6709 T 4E4V_A 280 TDEQTQVVIDAGALAVFPSLLTN------PKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKA-DFKTQKE 352 (485)
6710 T ss_dssp CHHHHHHHHHTTGGGGHHHHHTC------SSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHS-CHHHHHH
6711 T ss_pred CHHHHHHHHhCChHHHHHHHhcC------CCHHHHHHHHHHHHHHcCCCHHHHHHHHHCCHHHHHHHHHhcC-CHHHHHH
6712 Confidence 2 22 233445678888888876 3678899999999999876555555566667788888888766 7788889
6713
6714
6715 Q NP_000290.2 704 ARLLLSDMWSS 714 (747)
6716 Q Consensus 704 AL~aLsnL~~~ 714 (747)
6717 ++.+|.+++..
6718 T Consensus 353 a~~~l~~l~~~ 363 (485)
6719 T 4E4V_A 353 AVWAVTNYTSG 363 (485)
6720 T ss_dssp HHHHHHHHHHH
6721 T ss_pred HHHHHHHHHhc
6722 Confidence 99999888865
6723
6724
6725 No 85
6726 >1WA5_B GTP-BINDING NUCLEAR PROTEIN RAN, IMPORTIN; NUCLEAR TRANSPORT-COMPLEX, NUCLEAR TRANSPORT, EXPORTIN; HET: GTP; 2.0A {CANIS FAMILIARIS} SCOP: a.118.1.1
6727 Probab=97.52 E-value=5.1e-08 Score=102.06 Aligned_cols=368 Identities=16% Similarity=0.204 Sum_probs=223.8 Template_Neff=12.300
6728
6729 Q NP_000290.2 242 CSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRST 319 (747)
6730 Q Consensus 242 ~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~ 319 (747)
6731 .....++.++..+.+.++.++..++..+..++..... ....+...++++.+...+...+ +.++..++.+|..++....
6732 T Consensus 84 ~~~~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~ 163 (530)
6733 T 1WA5_B 84 QLQQELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTS 163 (530)
6734 T ss_dssp ---CCHHHHHHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCH
6735 T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCCCCCHHHHHHcChHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCH
6736 Confidence 3445566666777777777888888888887653221 1223333457777777776543 6677888899988876443
6737
6738
6739 Q NP_000290.2 320 TNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
6740 Q Consensus 320 ~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
6741 .....+...++++.+...+. ..++.++..++.++..++... .....+.. ++++.|+.++...
6742 T Consensus 164 ~~~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--------------- 227 (530)
6743 T 1WA5_B 164 AQTKVVVDADAVPLFIQLLY-TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN--------------- 227 (530)
6744 T ss_dssp HHHHHHHHTTCHHHHHHHHH-HCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSC---------------
6745 T ss_pred HHHHHHhcCChHHHHHHHHh-CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHhhCC---------------
6746 Confidence 33333333466777777776 556788899999999988753 23333333 6777777776521
6747
6748
6749 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
6750 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
6751 ++++...+..+|..-... ...........+++..|...+.. .+......+..
6752 T Consensus 228 -~~~v~~~a~~~l~~l~~~---------------------~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~ 279 (530)
6753 T 1WA5_B 228 -KPSLIRTATWTLSNLCRG---------------------KKPQPDWSVVSQALPTLAKLIYS------MDTETLVDACW 279 (530)
6754 T ss_dssp -CHHHHHHHHHHHHHHHCC---------------------SSSCCCHHHHGGGHHHHHHHTTC------CCHHHHHHHHH
6755 T ss_pred -CHHHHHHHHHHHHHHHCC---------------------CCCCCCHHHHhhHHHHHHHHHhc------CCHHHHHHHHH
6756 Confidence 344444444443221100 00000011122334444333221 11111222222
6757
6758
6759 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
6760 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
6761 .|.++... +......+.+.++++.|+.++.
6762 T Consensus 280 ~l~~l~~~--------------------------------------------------~~~~~~~~~~~~~~~~l~~~l~ 309 (530)
6763 T 1WA5_B 280 AISYLSDG--------------------------------------------------PQEAIQAVIDVRIPKRLVELLS 309 (530)
6764 T ss_dssp HHHHHHSS--------------------------------------------------CHHHHHHHHHTTCHHHHHHGGG
6765 T ss_pred HHHHHcCC--------------------------------------------------CHHHHHHHHhCCHHHHHHHHhc
6766 Confidence 22222110 0001112345567778888887
6767
6768
6769 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQ 635 (747)
6770 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~g 635 (747)
6771 ..++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++++|.+++... .. ..+...+
6772 T Consensus 310 -~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 383 (530)
6773 T 1WA5_B 310 -HESTLVQTPALRAVGNIVTGNDL-----QTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDAN 383 (530)
6774 T ss_dssp -CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT
6775 T ss_pred -CCChhHHHHHHHHHHHHHhCCHH-----HHHHHHHCChHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCC
6776 Confidence 46777888999999998875332 1223344578888999988888889999999999998762 22 3334456
6777
6778
6779 Q NP_000290.2 636 VFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP---QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
6780 Q Consensus 636 iI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~---e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
6781 +++.|..++.+ .++.++..++.+|.+++.... .....+.+.++++.|..++.+. ++.++..++.+|.+++
6782 T Consensus 384 ~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~l~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~ 456 (530)
6783 T 1WA5_B 384 LIPPLVKLLEV------AEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIA-DNRIIEVTLDALENIL 456 (530)
6784 T ss_dssp CHHHHHHHHHH------SCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTC-CHHHHHHHHHHHHHHH
6785 T ss_pred chHHHHHHHHc------CCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHCCCHHHHHHHccCC-CHHHHHHHHHHHHHHH
6786 Confidence 77888888876 367889999999999987532 2334444557788888888866 7788999999999998
6787
6788
6789 Q NP_000290.2 713 SSKE 716 (747)
6790 Q Consensus 713 ~~~~ 716 (747)
6791 ...+
6792 T Consensus 457 ~~~~ 460 (530)
6793 T 1WA5_B 457 KMGE 460 (530)
6794 T ss_dssp HHHH
6795 T ss_pred HHHH
6796 Confidence 7654
6797
6798
6799 No 86
6800 >1EE4_A KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
6801 Probab=97.51 E-value=5.1e-08 Score=96.57 Aligned_cols=115 Identities=13% Similarity=0.098 Sum_probs=77.4 Template_Neff=13.200
6802
6803 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
6804 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
6805 .+++.+...+.+.++.++..++.++..+....+.....+...++++.+...+.+.++.++..++.++..++.........
6806 T Consensus 87 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 166 (423)
6807 T 1EE4_A 87 DAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDW 166 (423)
6808 T ss_dssp THHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCHHHHHHHHHHHHHHHCCSTTCCCH
6809 T ss_pred ChHHHHHHHHhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCh
6810 Confidence 34556666676777888889999999887654433333444467777888887777888888999998887644222222
6811
6812
6813 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
6814 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
6815 ....++++.+...+. ..++.++..++.++..+...
6816 T Consensus 167 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 201 (423)
6817 T 1EE4_A 167 SVVSQALPTLAKLIY-SMDTETLVDACWAISYLSDG 201 (423)
6818 T ss_dssp HHHGGGHHHHHHHTT-CSCHHHHHHHHHHHHHHTSS
6819 T ss_pred HHHhhHHHHHHHHHH-cCCHHHHHHHHHHHHHHhcC
6820 Confidence 233455666666665 45567777778887777654
6821
6822
6823 No 87
6824 >1EE4_B KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
6825 Probab=97.51 E-value=5.1e-08 Score=96.57 Aligned_cols=115 Identities=13% Similarity=0.098 Sum_probs=77.4 Template_Neff=13.200
6826
6827 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
6828 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
6829 .+++.+...+.+.++.++..++.++..+....+.....+...++++.+...+.+.++.++..++.++..++.........
6830 T Consensus 87 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 166 (423)
6831 T 1EE4_B 87 DAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDW 166 (423)
6832 T ss_dssp THHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCH
6833 T ss_pred ChHHHHHHHHhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCh
6834 Confidence 34556666676777888889999999887654433333444467777888887777888888999998887644222222
6835
6836
6837 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
6838 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
6839 ....++++.+...+. ..++.++..++.++..+...
6840 T Consensus 167 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 201 (423)
6841 T 1EE4_B 167 SVVSQALPTLAKLIY-SMDTETLVDACWAISYLSDG 201 (423)
6842 T ss_dssp HHHGGGHHHHHHHTT-CSCHHHHHHHHHHHHHHHSS
6843 T ss_pred HHHhhHHHHHHHHHH-cCCHHHHHHHHHHHHHHhcC
6844 Confidence 233455666666665 45567777778887777654
6845
6846
6847 No 88
6848 >4I2Z_A Protein UNC-45, Heat shock protein; chaperone, myosin folding, protein filaments; 2.9A {Caenorhabditis elegans}
6849 Probab=97.51 E-value=6.2e-08 Score=114.34 Aligned_cols=431 Identities=14% Similarity=0.098 Sum_probs=219.4 Template_Neff=8.600
6850
6851 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE--T 325 (747)
6852 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~--l 325 (747)
6853 +.++.++.+.+..++..++.+|.......... ..+. ...++.|..++.+.++.++..++..|..+.......... .
6854 T Consensus 443 ~~l~~~~~~~~~~~~~~a~~~l~~~~~~~~~~-~~i~-~~~v~~L~~l~~~~~~~v~~~A~~~L~kL~~~~~~~~~~~~~ 520 (961)
6855 T 4I2Z_A 443 PIMLEMAASQDHLMQGIAAELIVATVSKHERA-INML-KVGIPVLRALYDSEDPTVKVRALVGLCKIGAAGGDDISKATM 520 (961)
6856 T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHTTCCSSSSS-CHHH-HTHHHHHHHHHHCSSHHHHHHHHTTSSCC-------------
6857 T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHcChhHHH-HHHH-HhHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCCcchhhhcc
6858 Confidence 33334455556667777777777554332111 1122 235677777777778889999999999887643321110 1
6859
6860
6861 Q NP_000290.2 326 ---RRQNGIREAVSLLRRT--GNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVIIPFSGWCDGNSNMSREVV 398 (747)
6862 Q Consensus 326 ---l~~~IL~~Ll~lL~ss--~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~~~~~~~~~~~~~~~~~~ 398 (747)
6863 ....+...+..++... .+..++..++..|..+.........+.. ++++.|++++...-+...-| ++
6864 T Consensus 521 ~~~~~~~L~~~~~~~l~~~~~~~~~~~~~A~e~Layls~~~~vke~l~~d~~~l~~L~~ll~~~~~~~~~~-------~~ 593 (961)
6865 T 4I2Z_A 521 KEEAVISLAKTCKKFLLETEKYSVDIRRYACEGLSYLSLDADVKEWIVDDSLLLKALVLLAKKAGALCVYT-------LA 593 (961)
6866 T ss_dssp ----CCHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHHHHGGGGSHH-------HH
6867 T ss_pred chHHHHHHHHHHHHHHhcCcCCChHHHHHHHHHHHHHhcCHHHHHHHhcCHHHHHHHHHHHHHcChhHHHH-------HH
6868 Confidence 0112344444555411 2456888999999999876655555554 68888888887542111111 00
6869
6870
6871 Q NP_000290.2 399 DPEVFFNATGCL-RKRLG--MRELLALVPQRATSSRVNLSSADAGRQTMR--NYSGLIDSLMAYVQNCVAASRCDDKSVE 473 (747)
6872 Q Consensus 399 ~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (747)
6873 ..+-|-+... ++.+. |.+|..+..+.... ...+...+.-....+ --.|.+..|.+.+.. -+....+
6874 T Consensus 594 --~~l~nl~~~~~~~~~~~e~~~l~~~a~~~~~~-~~~~d~~~~v~~r~~~l~~~g~~~~Lv~ll~~------~s~~~r~ 664 (961)
6875 T 4I2Z_A 594 --TIYANLSNAFEKPKVDEEMVKLAQFAKHHVPE-THPKDTEEYVEKRVRALVEEGAVPACVAVSKT------ESKNALE 664 (961)
6876 T ss_dssp --HHHHHHTTCCCCCC----------CCCCSSTT-CCTTSSTTHHHHHHHHHHHSCSHHHHHHTCCC------SCSHHHH
6877 T ss_pred --HHHHHHhcCCCCCCCCHHHHHHHHHHhcCCCC-CCcCCCHHHHHHHHHHHHHCCCHHHHHHHhcC------CCHHHHH
6878 Confidence 0111111100 00000 11222221111110 000111111111111 113445555444432 1233445
6879
6880
6881 Q NP_000290.2 474 NCMCVLHNLSYRLDAEVPTRYRQLEYNARNAY-------TE---KSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWL 543 (747)
6882 Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~l 543 (747)
6883 .+..++++++-.- + .|-.-.+..+-..- ++ .....+..+-.. .-+..+.+...
6884 T Consensus 665 ~~~~~l~~l~~~~--~--~R~~iv~~G~v~~Ll~ll~~~~~~~~~~Aa~ALa~l~~-----~~~p~~~~~~~-------- 727 (961)
6885 T 4I2Z_A 665 LIARSLLAFAEYE--D--LRGRIIAEGGTVLCLRLTKEASGEGKIKAGHAIAKLGA-----KADPMISFPGQ-------- 727 (961)
6886 T ss_dssp HHHHHHHTTSCSS--T--THHHHTTTTHHHHHHHHHHHSCTHHHHHHHHHHHHHSS-----SSCSTTTSTTT--------
6887 T ss_pred HHHHHHHHHhCCH--H--HHHHHHHCchHHHHHHHHhcCChHHHHHHHHHHHHHHc-----cCChhhhcCCc--------
6888 Confidence 5666777776211 1 11110111100000 00 000000000000 00000111111
6889
6890
6891 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNM 622 (747)
6892 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsnL 622 (747)
6893 ...++++.|+.+|..+.+...+..++.+|.+|+..++. ....+.+.++++.|..+|. +.++.++..|+.++.+|
6894 T Consensus 728 ~~~~~i~pLv~lL~~~~~~~~~~eal~ALtnLa~~~~~-----~~~~I~~~~~~~~l~~lL~~~~~~~vr~aA~ell~nL 802 (961)
6895 T 4I2Z_A 728 RAYEVVKPLCDLLHPDVEGKANYDSLLTLTNLASVSDS-----IRGRILKEKAIPKIEEFWFMTDHEHLRAAAAELLLNL 802 (961)
6896 T ss_dssp HHHHTTSHHHHTTSCCSSCTTHHHHHHHHHHHHSSCHH-----HHHHHHHTTCHHHHGGGTSCSSCHHHHHHHHHHHHHS
6897 T ss_pred chhhHHHHHHHHhCCCCChHHHHHHHHHHHHHHcCCHH-----HHHHHHhcChHHHHHHHHhcCCCHHHHHHHHHHHHHH
6898 Confidence 01267899999987334556778899999999986533 3445566788999999888 77889999999999999
6899
6900
6901 Q NP_000290.2 623 SRHPLL-HRVM--GNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSS--SMLNNIINLCRSSAS 697 (747)
6902 Q Consensus 623 a~~~e~-~~ll--~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~--giL~~Ll~LL~s~~d 697 (747)
6903 +.++.. ..+. ..+.+..++.++.+. .+..++..|+.+|..++. .+.....+++. +.+..+..++.+. +
6904 T Consensus 803 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~-----~d~~~~~aA~~aLa~ls~-~~~~~~~i~~~~~~~~~il~~ll~~~-~ 875 (961)
6905 T 4I2Z_A 803 LFFEKFYEETVAPGTDRLKLWVLYSAEV-----EEERLSRASAAGFAILTE-DENACARIMDEIKSWPEVFKDIAMHE-D 875 (961)
6906 T ss_dssp SSSTTSSTTTTSSCCTHHHHHHHHHHSC-----SSSTHHHHHHHHHHHHHT-CHHHHHHHTTTCTTHHHHHHHHHHCS-S
6907 T ss_pred HcCHHHHHhhCCCCCccchhhhHHhccC-----CCHHHHHHHHHHHHHHhC-CHHHHHHHHHHHhchHHHHHHHhhCC-C
6908 Confidence 976544 2221 223444454443331 367888999999999884 46655555553 3466677777666 7
6909
6910
6911 Q NP_000290.2 698 PKAAEAARLLLSDMWS-SKELQGVLRQQG 725 (747)
6912 Q Consensus 698 ~eVr~aAL~aLsnL~~-~~~~~~~~~~~~ 725 (747)
6913 +.++..++.+|.+++. +.++...+-+.|
6914 T Consensus 876 ~~l~~ra~~~L~nl~~~~~~~~~~i~~~g 904 (961)
6915 T 4I2Z_A 876 AETQRRGLMGIANIMHSSNKLCSEIVSSE 904 (961)
6916 T ss_dssp TTHHHHHHHHHTTTSSSCHHHHTCCTTHH
6917 T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHhcc
6918 Confidence 8899999999999965 444444343344
6919
6920
6921 No 89
6922 >5XZX_A Importin subunit alpha-3, Ran-binding protein; nuclear import, TRANSPORT PROTEIN; 3.0A {Homo sapiens}
6923 Probab=97.48 E-value=6.3e-08 Score=95.65 Aligned_cols=360 Identities=17% Similarity=0.182 Sum_probs=211.7 Template_Neff=13.200
6924
6925 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
6926 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
6927 +++.+...+. ..++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++...+.....
6928 T Consensus 46 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 125 (416)
6929 T 5XZX_A 46 ILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDY 125 (416)
6930 T ss_dssp CHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHH
6931 T ss_pred cHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCChHHHHHHHhcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
6932 Confidence 4555666665 456678888888888887654433333334567777888887777888999999999887654333333
6933
6934
6935 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
6936 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
6937 +...+++..+...+....++.++..++.++..++.......... .++++.+..++.. .++++
6938 T Consensus 126 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~ 189 (416)
6939 T 5XZX_A 126 VISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHH----------------TDVNI 189 (416)
6940 T ss_dssp HHHHTCHHHHTTSCSTTSCHHHHHHHHHHHHHHHHCCSSCCCHHHHHHHHHHHHHHTTC----------------CCHHH
6941 T ss_pred HHHCccHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhC----------------CCHHH
6942 Confidence 33345667777776533456778888888888876533211111 1566666666542 13444
6943
6944
6945 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
6946 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
6947 ...+..++..-... .+ .....+ --.+++..+...++. -+..-...+...|.++
6948 T Consensus 190 ~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l 242 (416)
6949 T 5XZX_A 190 LVDTVWALSYLTDA------GN--------------EQIQMV-IDSGIVPHLVPLLSH------QEVKVQTAALRAVGNI 242 (416)
6950 T ss_dssp HHHHHHHHHHHHHH------CH--------------HHHHHH-HHHTCHHHHGGGGGC------SCHHHHHHHHHHHHHH
6951 T ss_pred HHHHHHHHHHHhhc------CH--------------HHHHHH-HHCChHHHHHHHcCC------CCHHHHHHHHHHHHHH
6952 Confidence 44444333221100 00 000000 001334444333321 0111111222222222
6953
6954
6955 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
6956 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
6957 ...- ......+.+.++++.+..++. +.++
6958 T Consensus 243 ~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~ 271 (416)
6959 T 5XZX_A 243 VTGT--------------------------------------------------DEQTQVVLNCDALSHFPALLT-HPKE 271 (416)
6960 T ss_dssp TTSC--------------------------------------------------HHHHHHHHTTTCGGGSHHHHT-CSCH
6961 T ss_pred HcCC--------------------------------------------------HHHHHHHcCcccHHHHHHHhc-CCCH
6962 Confidence 1100 001111234467788888887 4677
6963
6964
6965 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGNQVFPE 639 (747)
6966 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~giI~~ 639 (747)
6967 .++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. . .. ..+...++++.
6968 T Consensus 272 ~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~ 346 (416)
6969 T 5XZX_A 272 KINKEAVWFLSNITAGNQQ-----QVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPP 346 (416)
6970 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHTTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHH
6971 T ss_pred HHHHHHHHHHHHHhcCCHH-----HHHHHHhCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHCCCHHH
6972 Confidence 8888999999998765332 223334556888888888888888999999999999864 2 11 22334567788
6973
6974
6975 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA----KQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDM 711 (747)
6976 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~----~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL 711 (747)
6977 +..++.+ .++.++..++.+|.+++...+... ..+.+.++++.+..++.+. ++.++..++.+|.++
6978 T Consensus 347 l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~~ 415 (416)
6979 T 5XZX_A 347 FCNLLTV------KDAQVVQVVLDGLSNILKMAEDEAETIGNLIEECGGLEKIEQLQNHE-NEDIYKLAYEIIDQF 415 (416)
6980 T ss_dssp HHTTTTS------SCHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHTTHHHHHHTTCCTT-CHHHHHHHHHHHHHH
6981 T ss_pred HHHHccC------CCHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHcCHHHHHHHHhhCC-cHHHHHHHHHHHHHh
6982 Confidence 8888776 367888899999999987533211 1233345677888888766 778888888887764
6983
6984
6985 No 90
6986 >5MFO_F YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: CA, EDO; 1.3A {synthetic construct}
6987 Probab=97.46 E-value=6.9e-08 Score=85.28 Aligned_cols=134 Identities=25% Similarity=0.287 Sum_probs=89.4 Template_Neff=13.100
6988
6989 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
6990 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
6991 +++.+...+.+.++.++..++..+..++...+.....+...++++.+...+.+.++.++..++.++..++.........+
6992 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 84 (202)
6993 T 5MFO_F 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 84 (202)
6994 T ss_dssp THHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
6995 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
6996 Confidence 34556666666777888889999988876544444444445677888888887778888999999999886544333333
6997
6998
6999 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
7000 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
7001 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
7002 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 140 (202)
7003 T 5MFO_F 85 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 140 (202)
7004 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
7005 T ss_pred HHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhc
7006 Confidence 34456777777776 4566778888888888876422 2222223 55666666554
7007
7008
7009 No 91
7010 >3SL9_E Catenin beta-1, B-cell CLL/lymphoma 9; Armadillo repeat, components of the; HET: PEG, GOL, IMD, EDO; 2.2A {Homo sapiens}
7011 Probab=97.46 E-value=7.2e-08 Score=83.64 Aligned_cols=134 Identities=16% Similarity=0.201 Sum_probs=88.4 Template_Neff=12.600
7012
7013 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLG-GICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
7014 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~-IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
7015 .+++.+...+.+.++.++..++.++.++..... ....+.... +++.+..++.. .+..++..++.++..++.. ....
7016 T Consensus 13 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~-~~~~ 90 (167)
7017 T 3SL9_E 13 RAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA-SRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REGL 90 (167)
7018 T ss_dssp HHHHHHHHHHTCSCHHHHHHHHHHHHHHTTSHH-HHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS-HHHH
7019 T ss_pred CcHHHHHHHhCCCCHHHHHHHHHHHHHHccCHH-HHHHHHhCCchHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-HhHH
7020 Confidence 345556666666667788889999998876543 222233323 77777777776 6677888889999888743 3333
7021
7022
7023 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVII 381 (747)
7024 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~ 381 (747)
7025 ..+...+.++.+..++. ..++.++..++.++.+++.........+. ++++.|++++..
7026 T Consensus 91 ~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 150 (167)
7027 T 3SL9_E 91 LAIFKSGGIPALVKMLG-SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK 150 (167)
7028 T ss_dssp HHHHHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHCTTHHHHHHHTTHHHHHHHHHHH
7029 T ss_pred HHHHHCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHcCCHhHHHHHHHcCHHHHHHHHhcC
7030 Confidence 33444567777888776 55677888899999998875433333332 667777777654
7031
7032
7033 No 92
7034 >3NOW_A SD10334p; Armadillo Repeat, Hsp90, Myosin, Tetra-tricopeptide; 2.992A {Drosophila melanogaster}
7035 Probab=97.46 E-value=7.3e-08 Score=105.35 Aligned_cols=110 Identities=10% Similarity=0.050 Sum_probs=66.2 Template_Neff=12.800
7036
7037 Q NP_000290.2 247 IPKAVQYLSSQ--DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
7038 Q Consensus 247 L~~Ll~lL~ss--d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
7039 +..++..+.+. +..++..++..|..++... .........+.++.+...+.. .+..++..++.++..++........
7040 T Consensus 8 i~~l~~~l~~~~~~~~~r~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~ 86 (810)
7041 T 3NOW_A 8 VKQMMDLTFDLATPIDKRRAAANNLVVLAKEQ-TGAELLYKDHCIAKVASLTKVEKDQDIYVNMVHLVAALCENSVERTK 86 (810)
7042 T ss_dssp HHHHHHHHHSSCCSSHHHHHHHHHHHHHSSCH-HHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHH
7043 T ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHhccc-cccHHHHccccHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCHhHHH
7044 Confidence 33445555554 5778888888888887654 222223334567777777731 5678888999999888765332222
7045
7046
7047 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
7048 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
7049 .......++.+...+. ..++.++..++.++..++
7050 T Consensus 87 ~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~~~ 120 (810)
7051 T 3NOW_A 87 GVLTELGVPWFMRVLD-QKHENCVSTAQFCLQTIL 120 (810)
7052 T ss_dssp HHHHHSCHHHHHHHHH-CCSTTHHHHHHHHHHHHH
7053 T ss_pred HHHHHhcHHHHHHHhc-CCChhHHHHHHHHHHHHH
7054 Confidence 2222334566666665 345556666666666554
7055
7056
7057 No 93
7058 >5MFO_E YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: EDO, CA; 1.3A {synthetic construct}
7059 Probab=97.44 E-value=7.9e-08 Score=84.90 Aligned_cols=134 Identities=25% Similarity=0.287 Sum_probs=89.3 Template_Neff=13.100
7060
7061 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7062 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7063 +++.+...+.+.++.++..++..+..++...+.....+...++++.+...+.+.++.++..++.++..++.........+
7064 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 84 (202)
7065 T 5MFO_E 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 84 (202)
7066 T ss_dssp CHHHHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
7067 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHH
7068 Confidence 34556666666777888889999988876544434444445677888888887788889999999999886544333333
7069
7070
7071 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
7072 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
7073 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
7074 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 140 (202)
7075 T 5MFO_E 85 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 140 (202)
7076 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
7077 T ss_pred HHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhc
7078 Confidence 34456777777775 4566778888888888876422 2222223 55666666554
7079
7080
7081 No 94
7082 >4XZR_B Heh1-NLS, Kap60; karyopherins nuclear import ; 2.25A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
7083 Probab=97.44 E-value=8.1e-08 Score=95.04 Aligned_cols=115 Identities=13% Similarity=0.098 Sum_probs=77.3 Template_Neff=13.200
7084
7085 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
7086 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
7087 .+++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++.........
7088 T Consensus 87 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 166 (423)
7089 T 4XZR_B 87 DAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDW 166 (423)
7090 T ss_dssp TCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCHHHHHHHHHHHHHHHCCCTTCCCH
7091 T ss_pred chHHHHHHHHhCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCh
7092 Confidence 34556666677777888899999999887654433333444467777888887777888888999998887654222222
7093
7094
7095 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
7096 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
7097 ....++++.+...+. ..++.++..++.++..++..
7098 T Consensus 167 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 201 (423)
7099 T 4XZR_B 167 SVVSQALPTLAKLIY-SMDTETLVDACWAISYLSDG 201 (423)
7100 T ss_dssp HHHGGGHHHHHHHTT-CSCHHHHHHHHHHHHHHTSS
7101 T ss_pred HHhccHHHHHHHHhh-CCCHHHHHHHHHHHHHHhcC
7102 Confidence 233346666666665 44566777777777777654
7103
7104
7105 No 95
7106 >3OPB_A SWI5-dependent HO expression protein 4; HEAT and ARM fold, Myosin; 2.9A {Saccharomyces cerevisiae}
7107 Probab=97.44 E-value=9.1e-08 Score=108.58 Aligned_cols=168 Identities=20% Similarity=0.242 Sum_probs=116.3 Template_Neff=10.500
7108
7109 Q NP_000290.2 546 SDAIRTYLNLMGKSK-------------KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVV 612 (747)
7110 Q Consensus 546 ~G~I~~LL~LL~ss~-------------d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr 612 (747)
7111 .++++.|+.++.... +..++..++.+|.+++.......+......+...++++.|..++.+.++.++
7112 T Consensus 544 ~~~l~~L~~lL~~~~~~~~~~~~~~~~~~~~~~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~~~~~v~ 623 (778)
7113 T 3OPB_A 544 LNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQ 623 (778)
7114 T ss_dssp TTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHH
7115 T ss_pred cchHHHHHHHCCCCCCCCCCCCCChhhccHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHhcccHHHHHHHHhhCCCHHHH
7116 Confidence 456677777765211 4567778999999988752200000011222224688888888888888899
7117
7118
7119 Q NP_000290.2 613 RSGASLLSNMSRHPLL--HRVMGN------QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFS-SS 683 (747)
7120 Q Consensus 613 ~~AL~aLsnLa~~~e~--~~ll~~------giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve-~g 683 (747)
7121 ..++.+|++++..... ..++.. ++++.|+.++.. .+..++..++++|++++...+.....++. .+
7122 T Consensus 624 ~~a~~~L~~L~~~~~~~~~~~~~~~~~~~~~~l~~L~~ll~~------~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~ 697 (778)
7123 T 3OPB_A 624 RSTLELISNMMSHPLTIAAKFFNLENPQSLRNFNILVKLLQL------SDVESQRAVAAIFANIATTIPLIAKELLTKKE 697 (778)
7124 T ss_dssp HHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHCHHHHHHHTTCHH
7125 T ss_pred HHHHHHHHHHhcChhHHHHHhcCCCChhHHHhHHHHHHHhcC------CCHHHHHHHHHHHHHHHccCHHHHHHHhcCcc
7126 Confidence 9999999999987432 233332 678888888876 36789999999999997655554444443 67
7127
7128
7129 Q NP_000290.2 684 MLNNIINLCRSS-ASPKAAEAARLLLSDMWSSKELQG 719 (747)
7130 Q Consensus 684 iL~~Ll~LL~s~-~d~eVr~aAL~aLsnL~~~~~~~~ 719 (747)
7131 +++.|+.++.+. .+..++..++++|.+++...+...
7132 T Consensus 698 ~i~~L~~~L~~~~~~~~l~~~a~~aL~~L~~~~~~~~ 734 (778)
7133 T 3OPB_A 698 LIENAIQVFADQIDDIELRQRLLMLFFGLFEVIPDNG 734 (778)
7134 T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTCCSTT
7135 T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhCCcCC
7136 Confidence 889999998862 167789999999999997766544
7137
7138
7139 No 96
7140 >4I2W_A Protein UNC-45, Heat shock 70; chaperone, myosin folding, protein filaments; 3.6A {Caenorhabditis elegans}
7141 Probab=97.43 E-value=1e-07 Score=112.49 Aligned_cols=433 Identities=14% Similarity=0.102 Sum_probs=221.5 Template_Neff=8.600
7142
7143 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE-- 324 (747)
7144 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~-- 324 (747)
7145 ++.++.++.+.+..++..++.+|..+....... ..+. ...++.|..++.+.++.++..++..|..+..........
7146 T Consensus 442 ~~~l~~l~~~~~~~~~~~a~~~l~~~~~~~~~~-~~i~-~~~v~~L~~l~~~~~~~v~~~A~~~L~kL~~~~~~~~~~~~ 519 (961)
7147 T 4I2W_A 442 TPIMLEMAASQDHLMQGIAAELIVATVSKHERA-INML-KVGIPVLRALYDSEDPTVKVRALVGLCKIGAAGGDDISKAT 519 (961)
7148 T ss_dssp HHHHHHHHHSSCHHHHHTTTTTTTTTCCSCSSS-HHHH-HHHHHHHHHHHHCSCHHHHHHHHTTSSSCCC----------
7149 T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHcChhHHH-HHHH-HhHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCCcchhhhc
7150 Confidence 333334455556667777777777554332111 1122 235677777777778889999999999887543321100
7151
7152
7153 Q NP_000290.2 325 T---RRQNGIREAVSLLRRT--GNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
7154 Q Consensus 325 l---l~~~IL~~Ll~lL~ss--~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
7155 . ....+...+..++... .+..++..++..|..+.........+.. .+++.|++++...-+...-|-
7156 T Consensus 520 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~AvegLayLs~~~~vke~l~~d~~~l~~L~~ll~~~~~~~~~~~------- 592 (961)
7157 T 4I2W_A 520 MKEEAVISLAKTCKKFLLETEKYSVDIRRYACEGLSYLSLDADVKEWIVDDSLLLKALVLLAKKAGALCVYTL------- 592 (961)
7158 T ss_dssp --CCCTTHHHHHHHHHHHCCSSSCHHHHHHHHHHHHHTCSSHHHHHHHHHCHHHHHHHHHHHHHHGGGSHHHH-------
7159 T ss_pred cchHHHHHHHHHHHHHHhcCcCCChHHHHHHHHHHHHHhcCHHHHHHHhcCHHHHHHHHHHHHHcChhHHHHH-------
7160 Confidence 1 0112344455555411 2456888999999999876655555554 688889888875422111111
7161
7162
7163 Q NP_000290.2 398 VDPEVFFNATGCL-RKRL--GMRELLALVPQRATSSRVNLSSADAGRQTMRN--YSGLIDSLMAYVQNCVAASRCDDKSV 472 (747)
7164 Q Consensus 398 ~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (747)
7165 + ..+-|-+... ++.+ .|.+|..+..+..... ..+...+.-....+. -.|.+..|.+.+.. -+....
7166 T Consensus 593 ~--~~l~nl~~~~~~~~~~~e~~~l~~~a~~~~~~~-~~~d~~~~v~~r~~~l~~~g~~~~Lv~ll~~------~s~~~r 663 (961)
7167 T 4I2W_A 593 A--TIYANLSNAFEKPKVDEEMVKLAQFAKHHVPET-HPKDTEEYVEKRVRALVEEGAVPACVAVSKT------ESKNAL 663 (961)
7168 T ss_dssp H--HHHHHTTTCCCCCC----------CCCCCSTTC-TTTTSSTTHHHHHHHHHHSSSSHHHHHTTCC------CCSHHH
7169 T ss_pred H--HHHHHHhcCCCCCCCCHHHHHHHHHHhcCCCCC-CcCCCHHHHHHHHHHHHHCCCHHHHHHHhcC------CCHHHH
7170 Confidence 0 0111111110 0000 0122222211111110 011111111111111 12444444444332 122334
7171
7172
7173 Q NP_000290.2 473 ENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAY---T-E------KSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGW 542 (747)
7174 Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~ 542 (747)
7175 +.+..+|++++-.- +. |-.-.+..+-..- . + .....+..+-.. .-+..+.+...
7176 T Consensus 664 ~~~~~~l~~l~~~~--~~--R~~ivq~g~~~~Ll~ll~~~~~~~~~~Aa~ALa~l~~-----~~~p~~~~~~~------- 727 (961)
7177 T 4I2W_A 664 ELIARSLLAFAEYE--DL--RGRIIAEGGTVLCLRLTKEASGEGKIKAGHAIAKLGA-----KADPMISFPGQ------- 727 (961)
7178 T ss_dssp HHHHHHHHTTSSSS--TT--TTTTTTSSHHHHHHHHHHHSTTHHHHHHHHHHHTTSS-----SSCGGGTSTTT-------
7179 T ss_pred HHHHHHHHHHhCCH--HH--HHHHHHCchHHHHHHHHhcCChHHHHHHHHHHHHHHc-----cCChhhhcCCc-------
7180 Confidence 55566777776211 11 1000001100000 0 0 000000000000 00000111111
7181
7182
7183 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSN 621 (747)
7184 Q Consensus 543 lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsn 621 (747)
7185 ...++++.|+.+|..+.+...+..++.+|.+|+..++. ....+.+.++++.|..+|. +.++.++..|+.++.+
7186 T Consensus 728 -~~~~~i~pLv~lL~~~~~~~~~~eal~ALtnLa~~~~~-----~~~~I~~~~~~~~l~~lL~~~~~~~vr~aA~ell~n 801 (961)
7187 T 4I2W_A 728 -RAYEVVKPLCDLLHPDVEGKANYDSLLTLTNLASVSDS-----IRGRILKEKAIPKIEEFWFMTDHEHLRAAAAELLLN 801 (961)
7188 T ss_dssp -HHHHTTSGGGTSSSCCSSCTTTTTTHHHHHHHSSSCHH-----HHHHHHHTTCHHHHTTSSSCSTTHHHHHHHHHHHHT
7189 T ss_pred -chhhHHHHHHHHhCCCCChHHHHHHHHHHHHHHcCCHH-----HHHHHHhcChHHHHHHHHhcCCCHHHHHHHHHHHHH
7190 Confidence 11267899999987334556778899999999986533 3445556788899998888 7788999999999999
7191
7192
7193 Q NP_000290.2 622 MSRHPLL-HRVM--GNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSS--SMLNNIINLCRSSA 696 (747)
7194 Q Consensus 622 La~~~e~-~~ll--~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~--giL~~Ll~LL~s~~ 696 (747)
7195 |+.++.. ..+. ..+.+..++.++.+. .++.++..|+.+|+.++. .+.....+++. +.+..|..++.+.
7196 T Consensus 802 L~~~~~~~~~~~~~~~~~~~ll~~l~~~~-----~d~~~~~aA~~aLa~l~~-~~~~~~~i~~~~~~~~~~l~~ll~~~- 874 (961)
7197 T 4I2W_A 802 LLFFEKFYEETVAPGTDRLKLWVLYSAEV-----EEERLSRASAAGFAILTE-DENACARIMDEIKSWPEVFKDIAMHE- 874 (961)
7198 T ss_dssp TSSSSSSSTTTSSSCSSCHHHHHHHHHCC-----SSSTHHHHHHHHHHHHHS-SHHHHHHTGGGCTTHHHHHHHHHHCS-
7199 T ss_pred HHcCHHHHHhhCCCCCccchhhhHHhccC-----CCHHHHHHHHHHHHHHhC-CHHHHHHHHHHHhchHHHHHHHhhCC-
7200 Confidence 9976544 2221 223444444443331 357888999999999884 45555555553 3466677777666
7201
7202
7203 Q NP_000290.2 697 SPKAAEAARLLLSDMWS-SKELQGVLRQQGF 726 (747)
7204 Q Consensus 697 d~eVr~aAL~aLsnL~~-~~~~~~~~~~~~~ 726 (747)
7205 ++.++..++.+|.+++. +.+....+.+.|.
7206 T Consensus 875 ~~~l~~ra~~~l~nl~~~~~~~~~~~~~~g~ 905 (961)
7207 T 4I2W_A 875 DAETQRRGLMGIANIMHSSNKLCSEIVSSEV 905 (961)
7208 T ss_dssp STTHHHHHHHHTHHHHSSCSHHHHCCSSHHH
7209 T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHhccH
7210 Confidence 78899999999999965 4444443444443
7211
7212
7213 No 97
7214 >3TT9_A Plakophilin-2; CELL ADHESION; HET: GOL; 1.55A {Homo sapiens}
7215 Probab=97.42 E-value=9.1e-08 Score=88.50 Aligned_cols=221 Identities=45% Similarity=0.773 Sum_probs=134.5 Template_Neff=12.300
7216
7217 Q NP_000290.2 245 LTIPKAVQYLSSQD--EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNK 322 (747)
7218 Q Consensus 245 ~iL~~Ll~lL~ssd--~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
7219 ..++.++..+...+ ..++..++.++.+++.........+...++++.+..++...+..++..++.+|.+++.......
7220 T Consensus 8 ~~i~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~ 87 (233)
7221 T 3TT9_A 8 MTLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNK 87 (233)
7222 T ss_dssp CCHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHH
7223 T ss_pred hHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHccCHHHHHHHHHcchHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCcHH
7224 Confidence 34556666666544 6788888899988876444444445555678888888877777888999999999886444444
7225
7226
7227 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPE 401 (747)
7228 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~ 401 (747)
7229 ..+...+.++.++.++....+..++..++.++.+++........+.. +++..+..++.... .+-.....+.....+++
7230 T Consensus 88 ~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~ 166 (233)
7231 T 3TT9_A 88 LEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLMITEALLTLTENIIIPFS-GWPEGDYPKANGLLDFD 166 (233)
7232 T ss_dssp HHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHHHHHHHHHHCCCCCHHHH-CCCGGGCCCCCTTCCHH
7233 T ss_pred HHHHHcccHHHHHHHHhhCCCHHHHHHHHHHHHHHccCHHHHHHhhhhcHHHHHHHHHhhcc-CCCCCCCCcccCCCcHH
7234 Confidence 44445567777887775234567888999999999875544444444 66666666665432 11111222222334566
7235
7236
7237 Q NP_000290.2 402 VFFNATGCLRKRLGMRELLALVPQRATSSRVNLSS-ADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
7238 Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
7239 +...+.++|.. +.. .+..++.+....++++.|...++....-...+.+-.+++..+|.
7240 T Consensus 167 ~~~~a~~~l~~---------------------l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~L~ 225 (233)
7241 T 3TT9_A 167 IFYNVTGCLRN---------------------MSSAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILH 225 (233)
7242 T ss_dssp HHHHHHHHHHH---------------------HTTSCHHHHHHHHTSTTHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
7243 T ss_pred HHHHHHHHHHH---------------------HHhcCHHHHHHHHHcccHHHHHHHHHHcccccCCCChHHHHHHHHHHH
7244 Confidence 65555555432 111 22334444444455666666554421101115567788999999
7245
7246
7247 Q NP_000290.2 481 NLSYRLD 487 (747)
7248 Q Consensus 481 ~~~~~~~ 487 (747)
7249 ||+++.+
7250 T Consensus 226 ~l~~~~~ 232 (233)
7251 T 3TT9_A 226 NLSYQLE 232 (233)
7252 T ss_dssp HHCCCCC
7253 T ss_pred Hhhhccc
7254 Confidence 9987654
7255
7256
7257 No 98
7258 >2Z6H_A Catenin beta-1; Beta-Catenin, C-terminal Domain, Activator, Cell; 2.2A {Homo sapiens}
7259 Probab=97.42 E-value=9.4e-08 Score=103.88 Aligned_cols=378 Identities=17% Similarity=0.155 Sum_probs=229.8 Template_Neff=11.700
7260
7261 Q NP_000290.2 241 ECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRST 319 (747)
7262 Q Consensus 241 ~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~ 319 (747)
7263 +....+++.+...+.+.++.++..++.++..+..............+++..+...+. ..+..++..++.+|..++....
7264 T Consensus 10 ~~~~~~i~~L~~~l~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~ 89 (644)
7265 T 2Z6H_A 10 ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHRE 89 (644)
7266 T ss_pred HHhCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCcHHHHHHHhCCChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCHH
7267 Confidence 344566777888888778889999999999887653222111111346666777666 4566788888888888865432
7268
7269
7270 Q NP_000290.2 320 TNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELK-EELIA-DALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
7271 Q Consensus 320 ~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~-~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
7272 ....+...+.++.+...+. ..++.++..++.++..++...... ..+.. ++++.|+.++...
7273 T Consensus 90 -~~~~~~~~~~i~~L~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~--------------- 152 (644)
7274 T 2Z6H_A 90 -GLLAIFKSGGIPALVKMLG-SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT--------------- 152 (644)
7275 T ss_pred -HHHHHHHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHhcCC---------------
7276 Confidence 2223333467777888876 556788889999999988653322 22222 6677777766531
7277
7278
7279 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
7280 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
7281 ++++...+..+|..-.... ...+..... .++++.|...+... .+.+....++.
7282 T Consensus 153 -~~~~~~~a~~~L~~l~~~~--------------------~~~~~~~~~-~~~~~~L~~~l~~~-----~~~~~~~~a~~ 205 (644)
7283 T 2Z6H_A 153 -NVKFLAITTDCLQILAYGN--------------------QESKLIILA-SGGPQALVNIMRTY-----TYEKLLWTTSR 205 (644)
7284 T ss_pred -CHHHHHHHHHHHHHHhcCC--------------------HHHHHHHHH-CCcHHHHHHHhcCC-----CCHHHHHHHHH
7285 Confidence 3344444444443211000 000111111 23444444444321 12222233333
7286
7287
7288 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
7289 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
7290 +|.+++..- .....+.+.++++.|+.++.
7291 T Consensus 206 ~L~~l~~~~---------------------------------------------------~~~~~~~~~~~l~~l~~~l~ 234 (644)
7292 T 2Z6H_A 206 VLKVLSVCS---------------------------------------------------SNKPAIVEAGGMQALGLHLT 234 (644)
7293 T ss_pred HHHHHccCh---------------------------------------------------HHHHHHHHCCHHHHHHHHhc
7294 Confidence 333332110 00012345667888888887
7295
7296
7297 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQ 635 (747)
7298 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~g 635 (747)
7299 ..+..++..++++|.+++..... ... ..++++.|+.++.+.+..++..++.+|.+++.. ... ..+...+
7300 T Consensus 235 -~~~~~~~~~a~~~L~~l~~~~~~------~~~--~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 305 (644)
7301 T 2Z6H_A 235 -DPSQRLVQNCLWTLRNLSDAATK------QEG--MEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVG 305 (644)
7302 T ss_pred -CCCHHHHHHHHHHHHHHhcCCCC------HHH--HCchHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCC
7303 Confidence 46778888999999999875321 111 256788888888888888999999999999865 222 2334556
7304
7305
7306 Q NP_000290.2 636 VFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL---AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
7307 Q Consensus 636 iI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~---~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
7308 +++.++..+... ..+..++..++.+|.+++...+.. ...+...++++.|+.++....+..++..++.+|.+++
7309 T Consensus 306 ~l~~L~~~l~~~----~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~L~~l~ 381 (644)
7310 T 2Z6H_A 306 GIEALVRTVLRA----GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLA 381 (644)
7311 T ss_pred HHHHHHHHHhcC----CCCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHh
7312 Confidence 777777776521 035678889999999998753322 2333344677888888875435678899999999999
7313
7314
7315 Q NP_000290.2 713 SSKELQGVLRQQGF 726 (747)
7316 Q Consensus 713 ~~~~~~~~~~~~~~ 726 (747)
7317 ...+.+..+.+.|.
7318 T Consensus 382 ~~~~~~~~l~~~~~ 395 (644)
7319 T 2Z6H_A 382 LCPANHAPLREQGA 395 (644)
7320 T ss_pred cCHHHHHHHHHCCc
7321 Confidence 87776655555443
7322
7323
7324 No 99
7325 >4U2X_E eVP24, KPNA5C; eVP24, importin alpha6, immune antagonist; 3.153A {Zaire ebolavirus}
7326 Probab=97.42 E-value=9.4e-08 Score=83.77 Aligned_cols=116 Identities=17% Similarity=0.149 Sum_probs=80.4 Template_Neff=12.500
7327
7328 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKLE 324 (747)
7329 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~~ 324 (747)
7330 +++.+..++.+.++.++..++.++.++....+.....+...++++.+...+.+.+..++..++.++.+++.. .......
7331 T Consensus 9 ~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 88 (175)
7332 T 4U2X_E 9 ALPCLLHLLSSPKESIRKEACWTVSNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRY 88 (175)
7333 T ss_dssp SSHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHH
7334 T ss_pred hHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCChHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCHHHHHH
7335 Confidence 455566666667788889999999998865443333444456777888887777778888899999988753 2222223
7336
7337
7338 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
7339 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
7340 +...+.++.+...+. ..++.++..++.++.+++....
7341 T Consensus 89 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~ 125 (175)
7342 T 4U2X_E 89 LVALGCIKPLCDLLT-VMDSKIVQVALNGLENILRLGE 125 (175)
7343 T ss_dssp HHHHTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHHHHH
7344 T ss_pred HHHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHhhcH
7345 Confidence 333456777777776 5567788888899888887543
7346
7347
7348 No 100
7349 >4RV1_D Engineered Protein OR497; STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE; 2.573A {SYNTHETIC CONSTRUCT}
7350 Probab=97.42 E-value=9.1e-08 Score=94.28 Aligned_cols=363 Identities=20% Similarity=0.249 Sum_probs=217.4 Template_Neff=13.300
7351
7352 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7353 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7354 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.++.++..++.++..+...........
7355 T Consensus 45 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 124 (420)
7356 T 4RV1_D 45 GVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 124 (420)
7357 T ss_dssp HHHHHHHTTSCSCSSSHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
7358 T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChHHHHHH
7359 Confidence 45556666666777888899999988876543333333334567777777777778888899999988876543333333
7360
7361
7362 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
7363 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
7364 ...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.+..++... ++++-
7365 T Consensus 125 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~ 187 (420)
7366 T 4RV1_D 125 VDAGGVEVLVKLLT-STDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST----------------DSEVQ 187 (420)
7367 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS----------------SHHHH
7368 T ss_pred HHcCHHHHHHHHHh-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhcCC----------------CHHHH
7369 Confidence 33456777777776 55677888899999988864322 222222 5566666655421 23332
7370
7371
7372 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
7373 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
7374 ..+..++.. +.. ........-.-.++++.+...+++ -+..-...+...|.++.
7375 T Consensus 188 ~~~~~~l~~---------l~~------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 240 (420)
7376 T 4RV1_D 188 KEAARALAN---------IAS------------GPTSAIKAIVDAGGVEVLVKLLTS------TDSEVQKEAARALANIA 240 (420)
7377 T ss_dssp HHHHHHHHH---------HHT------------SCHHHHHHHHTTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHH
7378 T ss_pred HHHHHHHHH---------HhC------------CCHHHHHHHHHCCHHHHHHHHhhC------CCHHHHHHHHHHHHHHh
7379 Confidence 222222221 100 000000000001233333322221 01111122222222221
7380
7381
7382 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
7383 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
7384 ... ......+.+.++++.++..+. +.++.
7385 T Consensus 241 ~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~~ 269 (420)
7386 T 4RV1_D 241 SGP--------------------------------------------------DEAIKAIVDAGGVEVLVKLLT-STDSE 269 (420)
7387 T ss_dssp TSC--------------------------------------------------HHHHHHHHHTTHHHHHHHHTT-CSSHH
7388 T ss_pred CCC--------------------------------------------------HHHHHHHhhccHHHHHHHHhC-CCCHH
7389 Confidence 100 001111234567777888887 46677
7390
7391
7392 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFPEVT 641 (747)
7393 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~~Ll 641 (747)
7394 ++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++... .. ......++++.+.
7395 T Consensus 270 ~~~~~~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~ 344 (420)
7396 T 4RV1_D 270 VQKEAARALANIASGPDE-----AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLV 344 (420)
7397 T ss_dssp HHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHH
7398 T ss_pred HHHHHHHHHHHHHcCCHH-----HHHHHHHCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChHHHHHHHHHCCHHHHHH
7399 Confidence 888899999998875332 1223344578888888888888889999999999998763 22 2333446777788
7400
7401
7402 Q NP_000290.2 642 RLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
7403 Q Consensus 642 ~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
7404 .++.+ .++.++..++.+|.+++...+.....+.+.++++.+..++.+. ++.++..++.+|..+....
7405 T Consensus 345 ~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~~ 411 (420)
7406 T 4RV1_D 345 KLLTS------TDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTST-DSEVQKEAQRALENIKSGG 411 (420)
7407 T ss_dssp HHTTC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHHHTS
7408 T ss_pred HHhCC------CCHHHHHHHHHHHHHHHcCChhHHHHHHhccHHHHHHHHcCCC-CHHHHHHHHHHHHhhccCC
7409 Confidence 77776 3678899999999999876444444455556788888888766 7789999999999887644
7410
7411
7412 No 101
7413 >4BQK_A IMPORTIN SUBUNIT ALPHA-1A, T-DNA BORDER; TRANSPORT PROTEIN, HYDROLASE, NUCLEAR LOCALIZATION; HET: PEG; 1.997A {ORYZA SATIVA}
7414 Probab=97.41 E-value=9.4e-08 Score=96.14 Aligned_cols=158 Identities=18% Similarity=0.251 Sum_probs=116.4 Template_Neff=13.000
7415
7416 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
7417 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
7418 ..++++.|+.++. +.++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.
7419 T Consensus 170 ~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~ 243 (456)
7420 T 4BQK_A 170 TRPALPALARLIH-SNDEEVLTDACWALSYLSDGTND-----KIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVT 243 (456)
7421 T ss_dssp HTTHHHHHHHHTT-CCCHHHHHHHHHHHHHHTSSSHH-----HHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTT
7422 T ss_pred HHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCChH-----HHHHHHHCChHHHHHHHHhCCCHHHHHHHHHHHHHHHc
7423 Confidence 4456777888887 46778888899999998865332 22333456788889999888888899999999999987
7424
7425
7426 Q NP_000290.2 625 HPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
7427 Q Consensus 625 ~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
7428 ... . ..+...++++.+..++... .++.++..++.+|.+++...+.....+...++++.|..++.+. ++.++.
7429 T Consensus 244 ~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~ 317 (456)
7430 T 4BQK_A 244 GDDAQTQCIIDHQALPCLLSLLTQN-----LKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTA-EFDIKK 317 (456)
7431 T ss_dssp SCHHHHHHHHTTTHHHHHHHHHHSC-----CCHHHHHHHHHHHHHHHTSCHHHHHHHHHHTCHHHHHHHHHHS-CHHHHH
7432 T ss_pred CCHHHHHHHHHCChHHHHHHHHHcC-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhhcC-CHHHHH
7433 Confidence 632 2 2334446777888877652 2577889999999999876555555555666788888888766 778888
7434
7435
7436 Q NP_000290.2 703 AARLLLSDMWSS 714 (747)
7437 Q Consensus 703 aAL~aLsnL~~~ 714 (747)
7438 .++.+|.+++..
7439 T Consensus 318 ~a~~~l~~l~~~ 329 (456)
7440 T 4BQK_A 318 EAAWAISNATSG 329 (456)
7441 T ss_dssp HHHHHHHHHHHH
7442 T ss_pred HHHHHHHHHHcC
7443 Confidence 999999988863
7444
7445
7446 No 102
7447 >5TBK_C Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
7448 Probab=97.41 E-value=1e-07 Score=99.66 Aligned_cols=160 Identities=15% Similarity=0.207 Sum_probs=115.0 Template_Neff=12.200
7449
7450 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
7451 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
7452 .+.++++.|+.++....+..++..++.+|.+++..... ........++++.+..++.+.++.++..++.+|.+++
7453 T Consensus 196 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~ 270 (521)
7454 T 5TBK_C 196 ISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDP-----PPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLT 270 (521)
7455 T ss_dssp HHTTCHHHHHTTCCTTSCHHHHHHHHHHHHHHHCCCSS-----CCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHH
7456 T ss_pred HHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCC-----CCCHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHh
7457 Confidence 45567788888886323446778899999998865321 1112223567888888888888889999999999998
7458
7459
7460 Q NP_000290.2 624 RH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
7461 Q Consensus 624 ~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
7462 .. ... ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.+..++.+. ++.++
7463 T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~ 343 (521)
7464 T 5TBK_C 271 DAGNEQIQMVIDSGIVPHLVPLLSH------QEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHP-KEKIN 343 (521)
7465 T ss_dssp HHCHHHHHHHHHTTCHHHHGGGGGC------SSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCGGGHHHHHTCS-CHHHH
7466 T ss_pred ccChHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCHHHhHHHHhhCC-CHHHH
7467 Confidence 76 222 233445677788888765 3677888999999999876444444555557788888888766 78889
7468
7469
7470 Q NP_000290.2 702 EAARLLLSDMWSSK 715 (747)
7471 Q Consensus 702 ~aAL~aLsnL~~~~ 715 (747)
7472 ..++.+|.+++...
7473 T Consensus 344 ~~a~~~l~~l~~~~ 357 (521)
7474 T 5TBK_C 344 KEAVWFLSNITAGN 357 (521)
7475 T ss_dssp HHHHHHHHHHTTSC
7476 T ss_pred HHHHHHHHHHhCCC
7477 Confidence 99999999988653
7478
7479
7480 No 103
7481 >5TBK_D Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
7482 Probab=97.41 E-value=1e-07 Score=99.66 Aligned_cols=160 Identities=15% Similarity=0.207 Sum_probs=115.0 Template_Neff=12.200
7483
7484 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
7485 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
7486 .+.++++.|+.++....+..++..++.+|.+++..... ........++++.+..++.+.++.++..++.+|.+++
7487 T Consensus 196 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~ 270 (521)
7488 T 5TBK_D 196 ISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDP-----PPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLT 270 (521)
7489 T ss_dssp HHTCCHHHHHTTCCTTSCHHHHHHHHHHHHHHHCCCSS-----CCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHH
7490 T ss_pred HHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCC-----CCCHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHh
7491 Confidence 45567788888886323446778899999998865321 1112223567888888888888889999999999998
7492
7493
7494 Q NP_000290.2 624 RH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
7495 Q Consensus 624 ~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
7496 .. ... ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.+..++.+. ++.++
7497 T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~ 343 (521)
7498 T 5TBK_D 271 DAGNEQIQMVIDSGIVPHLVPLLSH------QEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHP-KEKIN 343 (521)
7499 T ss_dssp HHCHHHHHHHHHTTCHHHHGGGGGC------SSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCGGGHHHHHHCS-CHHHH
7500 T ss_pred ccChHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCHHHhHHHHhhCC-CHHHH
7501 Confidence 76 222 233445677788888765 3677888999999999876444444555557788888888766 78889
7502
7503
7504 Q NP_000290.2 702 EAARLLLSDMWSSK 715 (747)
7505 Q Consensus 702 ~aAL~aLsnL~~~~ 715 (747)
7506 ..++.+|.+++...
7507 T Consensus 344 ~~a~~~l~~l~~~~ 357 (521)
7508 T 5TBK_D 344 KEAVWFLSNITAGN 357 (521)
7509 T ss_dssp HHHHHHHHHHTTSC
7510 T ss_pred HHHHHHHHHHhCCC
7511 Confidence 99999999988653
7512
7513
7514 No 104
7515 >4U2X_F eVP24, KPNA5C; eVP24, importin alpha6, immune antagonist; 3.153A {Zaire ebolavirus}
7516 Probab=97.37 E-value=1.2e-07 Score=83.04 Aligned_cols=116 Identities=17% Similarity=0.149 Sum_probs=79.8 Template_Neff=12.500
7517
7518 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKLE 324 (747)
7519 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~~ 324 (747)
7520 +++.+..++.+.++.++..+++++.++..........+...++++.+..++.+.++.++..++.++..++.. .......
7521 T Consensus 9 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 88 (175)
7522 T 4U2X_F 9 ALPCLLHLLSSPKESIRKEACWTVSNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRY 88 (175)
7523 T ss_dssp CSHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHH
7524 T ss_pred hHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCChHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCHHHHHH
7525 Confidence 445566666666778889999999998865443333444446777888877776778888899999988753 2222233
7526
7527
7528 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
7529 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
7530 +...+.++.+...+. ..++.++..++.++.+++....
7531 T Consensus 89 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~ 125 (175)
7532 T 4U2X_F 89 LVALGCIKPLCDLLT-VMDSKIVQVALNGLENILRLGE 125 (175)
7533 T ss_dssp HHHHTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHHHHH
7534 T ss_pred HHHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcch
7535 Confidence 333456777777776 5566788888888888877543
7536
7537
7538 No 105
7539 >4V3Q_A YIII_M4_AII; DE NOVO PROTEIN, PROTEIN ENGINEERING; HET: GOL, CA; 1.8A {SYNTHETIC CONSTRUCT}
7540 Probab=97.37 E-value=1.2e-07 Score=87.00 Aligned_cols=113 Identities=25% Similarity=0.271 Sum_probs=78.0 Template_Neff=12.900
7541
7542 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
7543 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
7544 ++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+.
7545 T Consensus 10 ~~~~~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~ 89 (247)
7546 T 4V3Q_A 10 LPQMVQQLNSPDQQELQSALRKLSQIASGGDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVI 89 (247)
7547 T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
7548 T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHcCChhhhhhhhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHH
7549 Confidence 34455566677788888899999888765444444444556778888888777778888999999988765443333333
7550
7551
7552 Q NP_000290.2 327 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
7553 Q Consensus 327 ~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
7554 ..++++.+...+. +.++.++..++.++..++..
7555 T Consensus 90 ~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 122 (247)
7556 T 4V3Q_A 90 DAGALPALVQLLS-SPNEQILQEALWTLGNIASG 122 (247)
7557 T ss_dssp HTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTS
7558 T ss_pred HCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHcC
7559 Confidence 4456777777776 45667777788888777753
7560
7561
7562 No 106
7563 >3NMZ_A APC variant protein, Rho guanine; protein-protein complex, armadillo repeats, CELL; 3.01A {Homo sapiens}
7564 Probab=97.34 E-value=1.5e-07 Score=97.01 Aligned_cols=136 Identities=21% Similarity=0.259 Sum_probs=84.7 Template_Neff=12.000
7565
7566 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDE-SAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNK 322 (747)
7567 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~-~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
7568 .+++.+..++...++.++..++.+|.+++.... .....+...++++.+..++. ..+..++..++.++.+++.......
7569 T Consensus 243 ~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~ 322 (458)
7570 T 3NMZ_A 243 GCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 322 (458)
7571 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHHCCCChhHHHHHHHCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCchhH
7572 Confidence 456667777777777888999999999887543 22334444567777888777 5567788889999999886433333
7573
7574
7575 Q NP_000290.2 323 LETRR-QNGIREAVSLLRR---TGNAEIQKQLTGLLWNLSS----TDELKEELIA-DALPVLADRVI 380 (747)
7576 Q Consensus 323 ~~ll~-~~IL~~Ll~lL~s---s~d~eVr~~AL~aLsnLas----~~~~~~~Lve-giLe~Lv~LL~ 380 (747)
7577 ..+.. .+.++.+..++.. ..+..++..++.++.+++. .......+.+ ++++.|+.++.
7578 T Consensus 323 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~l~~~~~~~~l~~~l~ 389 (458)
7579 T 3NMZ_A 323 ADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLK 389 (458)
7580 T ss_pred HHHHHhcChHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhC
7581 Confidence 33333 4566666666641 1234566677777766652 2222222333 56666666654
7582
7583
7584 No 107
7585 >3L6X_A Catenin delta-1, E-cadherin; p120, catenin, cadherin, E-cadherin, armadillo; HET: SO4; 2.4A {Homo sapiens}
7586 Probab=97.34 E-value=1.6e-07 Score=102.08 Aligned_cols=377 Identities=16% Similarity=0.154 Sum_probs=185.5 Template_Neff=11.000
7587
7588 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
7589 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
7590 +++.|+.++.+.+..++..++.+|.+++.. .......+...+.++.++.++.. .+..++..++.+|.+++.... ...
7591 T Consensus 91 ~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~v~~~a~~~L~~L~~~~~-~~~ 169 (584)
7592 T 3L6X_A 91 GIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDS-IKM 169 (584)
7593 T ss_dssp HHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGG-GHH
7594 T ss_pred cHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHcCChHHHHHHHHHHcCCHHHHHHHHHHHHHHhcCHH-HHH
7595 Confidence 466677777777788999999999999874 34444445556778888888875 366788888999988875432 222
7596
7597
7598 Q NP_000290.2 324 ETRRQNGIREAVSLLR-----------------RTGNAEIQKQLTGLLWNLSSTDE-LKEELIA--DALPVLADRVIIPF 383 (747)
7599 Q Consensus 324 ~ll~~~IL~~Ll~lL~-----------------ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve--giLe~Lv~LL~~~~ 383 (747)
7600 .+... .+..+...+. ...+..++..++.+|.+++.... ....+.. ++++.|+.+|....
7601 T Consensus 170 ~l~~~-~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~g~v~~L~~~l~~~~ 248 (584)
7602 T 3L6X_A 170 EIVDH-ALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEI 248 (584)
7603 T ss_dssp HHHHH-THHHCCCCCCHHHHCCC----------CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHH
7604 T ss_pred HHHHH-HHHHHHHhccccCCCCCCCCCcCCCCcccChHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHHHHHh
7605 Confidence 22222 4444444431 12235677888899998887542 3333333 67788888876432
7606
7607
7608 Q NP_000290.2 384 SGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMR--E------LLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLM 455 (747)
7609 Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (747)
7610 .. ...++++.-++..+|+.-..-. + .....+.-....+ .....++..+. -.+.++.|.
7611 T Consensus 249 ~~----------~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~-~~~~~~~l~ 314 (584)
7612 T 3L6X_A 249 GQ----------KDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTG---TSPARGYELLF-QPEVVRIYI 314 (584)
7613 T ss_dssp HT----------TCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC-----------------CCCCGGGGGG-SHHHHHHHH
7614 T ss_pred cC----------CCCChHHHHHHHHHHHHHHhhhhccChhHHHHHHhcCcCCCCCC---CCChhhhhHhh-ChhHHHHHH
7615 Confidence 10 0123334444444443211100 0 0000000000000 00111122221 134555555
7616
7617
7618 Q NP_000290.2 456 AYVQNCVAASRCDDKSVENCMCVLHNLSYRLD---AEVPTRYRQLEYNAR----------NAYTEKSSTGCFSNKSDKMM 522 (747)
7619 Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 522 (747)
7620 ..+... -+..-.+.+..+|.||+..-. .++....+ +...- +.........+..|-+.
7621 T Consensus 315 ~ll~~~-----~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~--~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~--- 384 (584)
7622 T 3L6X_A 315 SLLKES-----KTPAILEASAGAIQNLCAGRWTYGRYIRSALR--QEKALSAIADLLTNEHERVVKAASGALRNLAV--- 384 (584)
7623 T ss_dssp HHHHHC-----CCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHT--SHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHT---
7624 T ss_pred HHHHcC-----CCHHHHHHHHHHHHHHhCCCccCCHHHHHHHH--HcChHHHHHHHhcCCCHHHHHHHHHHHHHHhc---
7625 Confidence 554431 144556777888888876321 11111000 00000 00001111111111100
7626
7627
7628 Q NP_000290.2 523 NNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK--------KDATLEACAGALQNLTASKGLMSSGMSQLIGLKE 594 (747)
7629 Q Consensus 523 ~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~--------d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~ 594 (747)
7630 +...... +..++++.|+.+|.. . +..++..++.+|.+++..... ....+.+.
7631 T Consensus 385 -------------~~~~~~~-l~~~~l~~L~~~L~~-~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~-----~~~~l~~~ 444 (584)
7632 T 3L6X_A 385 -------------DARNKEL-IGKHAIPNLVKNLPG-GQQNSSWNFSEDTVISILNTINEVIAENLE-----AAKKLRET 444 (584)
7633 T ss_dssp -------------TCSCHHH-HHHHHHHHHHHTSSS-SSCSGGGTCCHHHHHHHHHHHHHHHTTCHH-----HHHHHHHT
7634 T ss_pred -------------ChHHHHH-HHcchHHHHHHcCCC-CCCCCCcCCCHHHHHHHHHHHHHHHhcCHH-----HHHHHHHC
7635 Confidence 0011111 224788888888863 3 334467888888888764332 23444577
7636
7637
7638 Q NP_000290.2 595 KGLPQIARLLQSG--NSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPE-VTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
7639 Q Consensus 595 giI~~Ll~LL~s~--d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~-Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
7640 ++++.|+.++... +..++..|+.+|.+++..... ..+...++++. +..++... ..++.++..++.+|.++..
7641 T Consensus 445 ~~l~~L~~ll~~~~~~~~v~~~a~~~L~~l~~~~~~~~~l~~~g~~~~~l~~~~~~~----~~~~~~~~~a~~~L~~l~~ 520 (584)
7642 T 3L6X_A 445 QGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDFQVNLNNA----SRSQSSHSYDDSTLPLIDR 520 (584)
7643 T ss_dssp THHHHHHHHHTCSSSCHHHHHHHHHHHHHHHTSHHHHHHHHTTTCCGGGGCCC---------------------------
7644 T ss_pred CHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHcCCchhhceeccccc----ccCCCCCCcccccccccCC
7645 Confidence 8999999998753 477899999999999876444 33445566676 55553211 0357788889999999987
7646
7647
7648 Q NP_000290.2 671 SQ 672 (747)
7649 Q Consensus 671 ~s 672 (747)
7650 ..
7651 T Consensus 521 ~~ 522 (584)
7652 T 3L6X_A 521 NQ 522 (584)
7653 T ss_dssp --
7654 T ss_pred CC
7655 Confidence 53
7656
7657
7658 No 108
7659 >5MFI_B YIII(Dq.V2)4CqI, (KR)4; Designed armadillo repeat protein, peptide; 1.45A {synthetic construct}
7660 Probab=97.33 E-value=1.5e-07 Score=85.77 Aligned_cols=113 Identities=20% Similarity=0.252 Sum_probs=78.4 Template_Neff=13.000
7661
7662 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7663 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7664 +++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++.+++.........+
7665 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 84 (243)
7666 T 5MFI_B 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 84 (243)
7667 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHTTTSSCHHHHHHHHHHHHHHTTSCHHHHHHH
7668 T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
7669 Confidence 45556666666777888899999998876544443444445677888888877778888899999998886444333333
7670
7671
7672 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
7673 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
7674 ...++++.+...+. ..++.++..++.++..++.
7675 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~ 117 (243)
7676 T 5MFI_B 85 IEAGALSPLVKLLD-DASEEVIQEAVWAIANIAS 117 (243)
7677 T ss_dssp HHTTCHHHHHHHTS-SSCHHHHHHHHHHHHHHTT
7678 T ss_pred HHcCcHHHHHHHHh-cCCHHHHHHHHHHHHHHHc
7679 Confidence 33456777777775 4566677777888877775
7680
7681
7682 No 109
7683 >5MFJ_B YIII(Dq.V2)4CqI, (KR)5; Designed armadillo repeat protein, peptide; 1.53A {synthetic construct}
7684 Probab=97.33 E-value=1.5e-07 Score=85.77 Aligned_cols=113 Identities=20% Similarity=0.252 Sum_probs=77.5 Template_Neff=13.000
7685
7686 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7687 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7688 +++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++.+++.........+
7689 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 84 (243)
7690 T 5MFJ_B 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 84 (243)
7691 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHGGGCSCTTTC-CHHHHHHHHTTSCHHHHHHH
7692 T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
7693 Confidence 45556666666777888899999998876544443444445677888888877778888899999998886444333333
7694
7695
7696 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
7697 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
7698 ...++++.+...+. ..++.++..++.++..++.
7699 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~ 117 (243)
7700 T 5MFJ_B 85 IEAGALSPLVKLLD-DASEEVIQEAVWAIANIAS 117 (243)
7701 T ss_dssp HHTTCHHHHHHHHH-HSCHHHHHHHHHHHHHHHT
7702 T ss_pred HHcCcHHHHHHHHh-cCCHHHHHHHHHHHHHHHc
7703 Confidence 33456777777775 4566677777888877775
7704
7705
7706 No 110
7707 >5VOZ_P V-type proton ATPase catalytic subunit; V-ATPase, SidK, rotational state 3;{Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
7708 Probab=97.30 E-value=2.1e-07 Score=101.03 Aligned_cols=134 Identities=14% Similarity=0.103 Sum_probs=89.5 Template_Neff=8.900
7709
7710 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICK--LVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
7711 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~--Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
7712 .++.++.++.+ +..++..++.+|..++... .........+.++. ++.++.. .+..++..++.+|..++... ...
7713 T Consensus 124 ~~~~li~lL~~-d~~i~~~a~~~L~~L~~~~-~~~~~~~~~~~l~~~~li~~L~~~~~~~~~~~a~~~L~~L~~~~-~~r 200 (478)
7714 T 5VOZ_P 124 LEQLFDVSLKG-DFQTVLISGFNVVSLLVQN-GLHNVKLVEKLLKNNNLINILQNIEQMDTCYVCIRLLQELAVIP-EYR 200 (478)
7715 T ss_dssp HHHHTTSTTSS-CHHHHHHHHHHHHHHHTSS-SCCCHHHHHHHHSSHHHHHHHHCSSCHHHHHHHHHHHHHHTTSH-HHH
7716 T ss_pred HHHHHHHHcCC-CHHHHHHHHHHHHHHHHhc-cccCcccchhhcccchHHHHHhccCCccHHHHHHHHHHHHcCCh-HHH
7717 Confidence 45666667766 6677888888888887643 22112223456666 7777753 35667888899999888643 333
7718
7719
7720 Q NP_000290.2 323 LETRR--QNGIREAVSLLRRT----------------GNAEIQKQLTGLLWNLSSTDELKEELIA---DALPVLADRVII 381 (747)
7721 Q Consensus 323 ~~ll~--~~IL~~Ll~lL~ss----------------~d~eVr~~AL~aLsnLas~~~~~~~Lve---giLe~Lv~LL~~ 381 (747)
7722 ..+.. .+.++.|+.++... .++.++..++.++..|+........+.. ++++.|+++++.
7723 T Consensus 201 ~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~~~~~~~~~~~~ql~~~a~~~L~~Ls~~~~~~~~l~~~~~~~i~~Lv~ll~~ 280 (478)
7724 T 5VOZ_P 201 DVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKI 280 (478)
7725 T ss_dssp HHHHHSTTSSHHHHHHHHHHHHHSCSSCCCTTTSSSHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHSHHHHGGGHHHHHH
7726 T ss_pred HHHHHccccchHHHHHHHHhccccccccccccccCcCcCHHHHHHHHHHHHHHhcCHHHHHHHHHHhHHHHHHHHHHHhc
7727 Confidence 33444 35777888877621 2567888899999999876555555543 688889998886
7728
7729
7730 Q NP_000290.2 382 P 382 (747)
7731 Q Consensus 382 ~ 382 (747)
7732 .
7733 T Consensus 281 ~ 281 (478)
7734 T 5VOZ_P 281 T 281 (478)
7735 T ss_dssp C
7736 T ss_pred c
7737 Confidence 4
7738
7739
7740 No 111
7741 >5D80_H V-type proton ATPase catalytic subunit; Hydrolase, Autoinhibition; 6.202A {Saccharomyces cerevisiae}
7742 Probab=97.30 E-value=2.1e-07 Score=101.03 Aligned_cols=134 Identities=14% Similarity=0.103 Sum_probs=89.5 Template_Neff=8.900
7743
7744 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICK--LVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
7745 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~--Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
7746 .++.++.++.+ +..++..++.+|..++... .........+.++. ++.++.. .+..++..++.+|..++... ...
7747 T Consensus 124 ~~~~li~lL~~-d~~i~~~a~~~L~~L~~~~-~~~~~~~~~~~l~~~~li~~L~~~~~~~~~~~a~~~L~~L~~~~-~~r 200 (478)
7748 T 5D80_H 124 LEQLFDVSLKG-DFQTVLISGFNVVSLLVQN-GLHNVKLVEKLLKNNNLINILQNIEQMDTCYVCIRLLQELAVIP-EYR 200 (478)
7749 T ss_pred HHHHHHHHcCC-CHHHHHHHHHHHHHHHHhc-cccCcccchhhcccchHHHHHhccCCccHHHHHHHHHHHHcCCh-HHH
7750 Confidence 45666667766 6677888888888887643 22112223456666 7777753 35667888899999888643 333
7751
7752
7753 Q NP_000290.2 323 LETRR--QNGIREAVSLLRRT----------------GNAEIQKQLTGLLWNLSSTDELKEELIA---DALPVLADRVII 381 (747)
7754 Q Consensus 323 ~~ll~--~~IL~~Ll~lL~ss----------------~d~eVr~~AL~aLsnLas~~~~~~~Lve---giLe~Lv~LL~~ 381 (747)
7755 ..+.. .+.++.|+.++... .++.++..++.++..|+........+.. ++++.|+++++.
7756 T Consensus 201 ~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~~~~~~~~~~~~ql~~~a~~~L~~Ls~~~~~~~~l~~~~~~~i~~Lv~ll~~ 280 (478)
7757 T 5D80_H 201 DVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKI 280 (478)
7758 T ss_pred HHHHHccccchHHHHHHHHhccccccccccccccCcCcCHHHHHHHHHHHHHHhcCHHHHHHHHHHhHHHHHHHHHHHhc
7759 Confidence 33444 35777888877621 2567888899999999876555555543 688889998886
7760
7761
7762 Q NP_000290.2 382 P 382 (747)
7763 Q Consensus 382 ~ 382 (747)
7764 .
7765 T Consensus 281 ~ 281 (478)
7766 T 5D80_H 281 T 281 (478)
7767 T ss_pred c
7768 Confidence 4
7769
7770
7771 No 112
7772 >1JDH_A BETA-CATENIN, hTcf-4; BETA-CATENIN, TCF4, PROTEIN-PROTEIN COMPLEX, TRANSCRIPTION; 1.9A {Homo sapiens} SCOP: a.118.1.1
7773 Probab=97.29 E-value=1.9e-07 Score=95.60 Aligned_cols=138 Identities=25% Similarity=0.275 Sum_probs=87.6 Template_Neff=13.100
7774
7775 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR--SPNQNVQQAAAGALRNLVFRSTTN- 321 (747)
7776 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~--s~d~eVr~~AL~aLs~La~~~~~~- 321 (747)
7777 .+++.+...+.+.+..++..++.++..++.........+...+.++.+...+. ..++.++..++.++..++......
7778 T Consensus 266 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~ 345 (529)
7779 T 1JDH_A 266 GLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAE 345 (529)
7780 T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHH
7781 T ss_pred hHHHHHHHHhCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCHHHHHHHHHHhcCCChHhHHHHHHHHHHHhcCcccHH
7782 Confidence 44555666666667778888888888887654433333344556666766554 345677888888888887654321
7783
7784
7785 Q NP_000290.2 322 --KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIP 382 (747)
7786 Q Consensus 322 --~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~ 382 (747)
7787 .......+.++.+...+....++.++..++.++.+++........+.. ++++.|..++...
7788 T Consensus 346 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~ 409 (529)
7789 T 1JDH_A 346 MAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRA 409 (529)
7790 T ss_dssp HHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHH
7791 T ss_pred HHHHHHHhcccHHHHHHHHCCCCCHHHHHHHHHHHHHHhcChhhhHHHHhcCHHHHHHHHHHhc
7792 Confidence 112222356667777775223567888899999988876444444444 6777777777643
7793
7794
7795 No 113
7796 >2Z6G_A B-catenin; Full-Length, Beta-Catenin, CELL ADHESION; 3.4A {Danio rerio}
7797 Probab=97.28 E-value=2.2e-07 Score=105.08 Aligned_cols=353 Identities=20% Similarity=0.229 Sum_probs=182.2 Template_Neff=10.700
7798
7799 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
7800 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
7801 .+++.+..++.+.+..++..++.+|..++.........+...+++..++.++... +..++..++.+|..+..... ...
7802 T Consensus 276 ~~~~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~-~~~ 354 (780)
7803 T 2Z6G_A 276 GGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS-NKP 354 (780)
7804 T ss_pred CHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCHH-HHH
7805 Confidence 3455566666666778888888888888764443333333445677777777654 56777888888888775432 222
7806
7807
7808 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
7809 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
7810 .+...++++.+...+. ..+..++..++.+|..++...... ....++++.|+.++... ++++.
7811 T Consensus 355 ~~~~~~~l~~L~~~l~-~~~~~v~~~al~~L~~l~~~~~~~-~~~~~~l~~L~~~l~~~----------------~~~v~ 416 (780)
7812 T 2Z6G_A 355 AIVEAGGMQALGLHLT-DPSQRLVQNCLWTLRNLSDAATKQ-EGMEGLLGTLVQLLGSD----------------DINVV 416 (780)
7813 T ss_pred HHHHCCHHHHHHHHcc-CCCHHHHHHHHHHHHHHhcCCCCH-HHHcChHHHHHHHhcCC----------------CHHHH
7814 Confidence 2333456777777776 556778888999998887643321 11125566666666421 23344
7815
7816
7817 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
7818 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
7819 ..+..+|..-..- .+. .+. .-.-.+.++.|...+.. ..-+..-.+.+.+.|.++.
7820 T Consensus 417 ~~a~~~L~~l~~~------~~~--------------~~~-~~~~~~~l~~L~~~l~~----~~~~~~v~~~a~~~L~~l~ 471 (780)
7821 T 2Z6G_A 417 TCAAGILSNLTCN------NYK--------------NKM-MVCQVGGIEALVRTVLR----AGDREDITEPAICALRHLT 471 (780)
7822 T ss_pred HHHHHHHHHHHcC------CHH--------------HHH-HHHHCChHHHHHHHHhc----CCCCHHHHHHHHHHHHHHH
7823 Confidence 4444443221100 000 000 00012233333322211 0112233456666666666
7824
7825
7826 Q NP_000290.2 484 YRLDAEV------------PTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRT 551 (747)
7827 Q Consensus 484 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~ 551 (747)
7828 .+..... +.-.+-+.. ..+....+....++.+-.. .......+.+.++++.
7829 T Consensus 472 ~~~~~~~~~~~~~~~~~~i~~L~~ll~~-~~~~~v~~~a~~~L~~l~~----------------~~~~~~~~~~~~~l~~ 534 (780)
7830 T 2Z6G_A 472 SRHQDAEMAQNAVRLHYGLPVVVKLLHP-PSHWPLIKATVGLIRNLAL----------------CPANHAPLREQGAIPR 534 (780)
7831 T ss_pred cCCccHHHHHHHHHHCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHhc----------------CHHHHHHHHhCChHHH
7832 Confidence 5442110 000000000 0000000011111111100 0011112345566666
7833
7834
7835 Q NP_000290.2 552 YLNLMGKSKK----------------------DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS 609 (747)
7836 Q Consensus 552 LL~LL~ss~d----------------------~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~ 609 (747)
7837 |+.++.. .. ..++..++.+|.+++.... ....+...++++.|+.++.+.++
7838 T Consensus 535 L~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~aL~~L~~~~~------~~~~~~~~~~l~~L~~~l~~~~~ 607 (780)
7839 T 2Z6G_A 535 LVQLLVR-AHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILARDIH------NRIVIRGLNTIPLFVQLLYSPIE 607 (780)
7840 T ss_pred HHHHhcC-CCHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHHHhCChh------HHHHHHhCCcHHHHHHHhcCCCH
7841 Confidence 7666652 22 2366777777777775422 12222345667777777777677
7842
7843
7844 Q NP_000290.2 610 DVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
7845 Q Consensus 610 eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
7846 .++..++.+|.+++..... ..+...++++.|..++.+ .++.++..++.+|.+|+..
7847 T Consensus 608 ~v~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~------~~~~v~~~a~~~L~~L~~~ 664 (780)
7848 T 2Z6G_A 608 NIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHS------RNEGVATYAAAVLFRMSED 664 (780)
7849 T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHHCC
7850 Confidence 7788888888888755332 233345566777777665 3567777788888887764
7851
7852
7853 No 114
7854 >1HO8_A VACUOLAR ATP SYNTHASE SUBUNIT H; HEAT repeat, HYDROLASE; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
7855 Probab=97.27 E-value=2.5e-07 Score=100.53 Aligned_cols=135 Identities=14% Similarity=0.099 Sum_probs=89.8 Template_Neff=8.900
7856
7857 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICK--LVDLLRS-PNQNVQQAAAGALRNLVFRSTTN 321 (747)
7858 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~--Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~ 321 (747)
7859 ..++.++.++.+ +..++..++.+|..++... .........+.++. ++.++.. .+..++..++.+|..++... ..
7860 T Consensus 125 ~~~~~li~lL~~-d~~i~~~a~~~L~~L~~~~-~~~~~~~~~~~l~~~~lv~~L~~~~~~~~~~~a~~~L~~L~~~~-~~ 201 (480)
7861 T 1HO8_A 125 QLEQLFDVSLKG-DFQTVLISGFNVVSLLVQN-GLHNVKLVEKLLKNNNLINILQNIEQMDTCYVCIRLLQELAVIP-EY 201 (480)
7862 T ss_dssp HHHHHHHHCSCS-SHHHHHHHHHHHHHHHTST-TTCCHHHHHHHHHCHHHHHHHHCTTCHHHHHHHHHHHHHHHTSH-HH
7863 T ss_pred hHHHHHHHHcCC-CHHHHHHHHHHHHHHHHhc-cccCcccchhhcccchHHHHHhcccCccHHHHHHHHHHHHcCCh-HH
7864 Confidence 345666777766 6677888888888887643 22112223456776 7777753 35667888899998888643 33
7865
7866
7867 Q NP_000290.2 322 KLETRR--QNGIREAVSLLRRT----------------GNAEIQKQLTGLLWNLSSTDELKEELIA---DALPVLADRVI 380 (747)
7868 Q Consensus 322 ~~~ll~--~~IL~~Ll~lL~ss----------------~d~eVr~~AL~aLsnLas~~~~~~~Lve---giLe~Lv~LL~ 380 (747)
7869 ...+.. .+.++.|+.++... .++.++..++.++..|.........+.. ++++.|+++++
7870 T Consensus 202 r~~~~~~~~~~i~~Lv~lL~~~~~~~~~~~~~~~~~~~~~~ql~~~a~~~L~~Ls~~~~~~~~i~~~~~~~i~~Lv~ll~ 281 (480)
7871 T 1HO8_A 202 RDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVK 281 (480)
7872 T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHTTSHHHHHHHHTTSHHHHHHHHHHHH
7873 T ss_pred HHHHHHccccchHHHHHHHHhccccchhcchhhccCcCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhHHHHHHHHHHHh
7874 Confidence 333444 35677787777621 2567888899999998876555555543 68888999888
7875
7876
7877 Q NP_000290.2 381 IP 382 (747)
7878 Q Consensus 381 ~~ 382 (747)
7879 ..
7880 T Consensus 282 ~~ 283 (480)
7881 T 1HO8_A 282 IT 283 (480)
7882 T ss_dssp HC
7883 T ss_pred hc
7884 Confidence 64
7885
7886
7887 No 115
7888 >6S9O_F designed Armadillo repeat protein with; peptide binder, repeat protein, designed; HET: CA, EDO; 3.17A {synthetic construct}
7889 Probab=97.21 E-value=2.9e-07 Score=88.31 Aligned_cols=135 Identities=25% Similarity=0.275 Sum_probs=88.9 Template_Neff=13.100
7890
7891 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7892 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7893 +++.+...+.+.+..++..++.++..+..........+...++++.+...+...++.++..++.++..++..........
7894 T Consensus 173 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 252 (344)
7895 T 6S9O_F 173 ALPALVQLLSSPNEQILQLALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 252 (344)
7896 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
7897 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHHcCChHHHHHHHhcChHHHHHHHccCCCHHHHHHHHHHHHHHHcCcHHHHHHH
7898 Confidence 45556666666677888889999988876543333333334567777777777777888889999988875544333333
7899
7900
7901 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVII 381 (747)
7902 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~ 381 (747)
7903 ...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.|..++..
7904 T Consensus 253 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 309 (344)
7905 T 6S9O_F 253 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSH 309 (344)
7906 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGC
7907 T ss_pred HHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHhhC
7908 Confidence 34456777777776 55677888899999988865322 222222 566666666643
7909
7910
7911 No 116
7912 >1XM9_A plakophilin 1 Plakophilin-1; armadillo repeat, CELL ADHESION; 2.8A {Homo sapiens} SCOP: a.118.1.24
7913 Probab=97.20 E-value=3.2e-07 Score=93.10 Aligned_cols=114 Identities=15% Similarity=0.165 Sum_probs=77.3 Template_Neff=12.600
7914
7915 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP------NQNVQQAAAGALRNLVFRST 319 (747)
7916 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~------d~eVr~~AL~aLs~La~~~~ 319 (747)
7917 +++.+..++.+.++.++..++.+|.+++... .....+ ...+++.+..++... +..++..++.++.+++...+
7918 T Consensus 332 ~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~-~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~L~~l~~~~~ 409 (457)
7919 T 1XM9_A 332 GLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LLHRVM-GNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP 409 (457)
7920 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSG-GGHHHH-HHHTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCT
7921 T ss_pred hHHHHHHHHhcCCHHHHHHHHHHHHHHhcCH-HHHHHH-HcccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHhcCH
7922 Confidence 4556666676677788889999999988542 222222 234667777777655 57788888999988875444
7923
7924
7925 Q NP_000290.2 320 TNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD 361 (747)
7926 Q Consensus 320 ~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~ 361 (747)
7927 .....+...+.++.+..++....++.++..++.++..++...
7928 T Consensus 410 ~~~~~~~~~~~~~~l~~ll~~~~~~~v~~~a~~~L~~l~~~~ 451 (457)
7929 T 1XM9_A 410 QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 451 (457)
7930 T ss_dssp HHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSSST
7931 T ss_pred HHHHHHHhccHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhcH
7932 Confidence 444444455677778887762256778888888888887644
7933
7934
7935 No 117
7936 >1XQS_B HSPBP1 protein, Heat shock 70; armadillo repeat, superhelical twist, CHAPERONE; HET: AMP; 2.9A {Homo sapiens} SCOP: a.118.1.21
7937 Probab=97.20 E-value=3.3e-07 Score=87.92 Aligned_cols=134 Identities=22% Similarity=0.180 Sum_probs=90.6 Template_Neff=11.900
7938
7939 Q NP_000290.2 246 TIPKAVQ-YLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
7940 Q Consensus 246 iL~~Ll~-lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
7941 +++.++. ++.+.+..++..++.++.+++.........+...++++.+..++... +..++..++.++.+++........
7942 T Consensus 66 ~i~~l~~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~ 145 (280)
7943 T 1XQS_B 66 GMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLL 145 (280)
7944 T ss_dssp HHHHCCCCCTSCSCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHHSCSCHHHHHHHHHHHHHTTSSCHHHHH
7945 T ss_pred cHHHHHHHHhhcCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHhcCHHHHH
7946 Confidence 3455555 66666677888899999998865444344444456777788877765 677888899999998865443333
7947
7948
7949 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
7950 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
7951 .+...+.++.+..++. ..+..++..++.++.+++.... ....+.. ++++.|+.++.
7952 T Consensus 146 ~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 203 (280)
7953 T 1XQS_B 146 QFLRLDGFSVLMRAMQ-QQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVR 203 (280)
7954 T ss_dssp HHHTTTHHHHHHHHHT-SSCHHHHHHHHHHHHHHHHHCGGGHHHHHTTTHHHHHHHHHT
7955 T ss_pred HHHHCCHHHHHHHHhh-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCHHHHHHHHHc
7956 Confidence 3444466777777776 4566788889999998887543 3333333 67777777764
7957
7958
7959 No 118
7960 >5MFI_B YIII(Dq.V2)4CqI, (KR)4; Designed armadillo repeat protein, peptide; 1.45A {synthetic construct}
7961 Probab=97.18 E-value=3.4e-07 Score=83.37 Aligned_cols=134 Identities=19% Similarity=0.243 Sum_probs=88.0 Template_Neff=13.000
7962
7963 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7964 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7965 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
7966 T Consensus 47 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 126 (243)
7967 T 5MFI_B 47 ALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 126 (243)
7968 T ss_dssp CHHHHHHTTTSSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTSSSCHHHHHHHHHHHHHHTTSCHHHHHHH
7969 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHH
7970 Confidence 45566666766777888889999998886544433334445677778888877777888889999998876444333333
7971
7972
7973 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
7974 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
7975 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
7976 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 182 (243)
7977 T 5MFI_B 127 IEAGALSPLVKLLD-DASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLD 182 (243)
7978 T ss_dssp HHTTCHHHHHHTTT-SSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHGGG
7979 T ss_pred HHCCcHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHcc
7980 Confidence 44456777777776 5566778888888888876322 2222222 45666665554
7981
7982
7983 No 119
7984 >5MFJ_B YIII(Dq.V2)4CqI, (KR)5; Designed armadillo repeat protein, peptide; 1.53A {synthetic construct}
7985 Probab=97.18 E-value=3.4e-07 Score=83.37 Aligned_cols=134 Identities=19% Similarity=0.243 Sum_probs=87.2 Template_Neff=13.000
7986
7987 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7988 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7989 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
7990 T Consensus 47 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 126 (243)
7991 T 5MFJ_B 47 ALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 126 (243)
7992 T ss_dssp CHHHHHHGGGCSCTTTC-CHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHTSCHHHHHHH
7993 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHH
7994 Confidence 45566666766777888889999998886544433334445677778888877777888889999998876444333333
7995
7996
7997 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
7998 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
7999 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
8000 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 182 (243)
8001 T 5MFJ_B 127 IEAGALSPLVKLLD-DASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLD 182 (243)
8002 T ss_dssp HHTTCHHHHHHTTT-SSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHGGG
8003 T ss_pred HHCCcHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHcc
8004 Confidence 44456777777776 5566778888888888876322 2222222 45666665554
8005
8006
8007 No 120
8008 >6SA6_A DARPin-Armadillo fusion A5; protein fusion, DARPin, Armadillo, shared; HET: EDO; 1.6A {synthetic construct}
8009 Probab=97.16 E-value=3.9e-07 Score=91.03 Aligned_cols=134 Identities=25% Similarity=0.292 Sum_probs=90.1 Template_Neff=12.400
8010
8011 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8012 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8013 +++.+...+.+.++.++..++.++.+++.........+...++++.+..++...++.++..++.++.+++.........+
8014 T Consensus 200 ~i~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 279 (397)
8015 T 6SA6_A 200 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 279 (397)
8016 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
8017 T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCcHHHHHHH
8018 Confidence 45566667776777888899999999887544444444455678888888887788889999999999876443333333
8019
8020
8021 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
8022 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
8023 ...++++.+...+. ..++.++..++.++.+++..... ...+.. ++++.|+.++.
8024 T Consensus 280 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 335 (397)
8025 T 6SA6_A 280 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLS 335 (397)
8026 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
8027 T ss_pred HhCChHHHHHHHhc-CCcHHHHHHHHHHHHHHhcCcHHHHHHHHhcChHHHHHHHhc
8028 Confidence 34456777777776 45667778888888888654322 222222 56666666654
8029
8030
8031 No 121
8032 >6SA8_A ring-like DARPin-Armadillo fusion H83_D01, LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG; protein fusion, DARPin, Armadillo, shared; 2.4A {synthetic construct}
8033 Probab=97.16 E-value=4e-07 Score=98.84 Aligned_cols=135 Identities=26% Similarity=0.299 Sum_probs=93.7 Template_Neff=11.900
8034
8035 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
8036 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
8037 .+++.+...+.+.++.++..++.++.+++...+.....+...+.++.+...+.+.+..++..++.++..++.........
8038 T Consensus 220 ~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 299 (671)
8039 T 6SA8_A 220 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 299 (671)
8040 T ss_dssp THHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
8041 T ss_pred ChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCcHHHHH
8042 Confidence 34566667777777888999999999987654443334444567788888887777888899999999888654333333
8043
8044
8045 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELK-EELIA-DALPVLADRVI 380 (747)
8046 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~-~~Lve-giLe~Lv~LL~ 380 (747)
8047 +...++++.+...+. ..++.++..++.++..++...... ..+.. ++++.|..++.
8048 T Consensus 300 ~~~~~~~~~L~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~l~~~l~ 356 (671)
8049 T 6SA8_A 300 VIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 356 (671)
8050 T ss_dssp HHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
8051 T ss_pred HHHhChHHHHHHHhc-CCcHHHHHHHHHHHHHHhcCCcHHHHHHHhcChHHHHHHHhc
8052 Confidence 444567778888886 556788889999999987643322 22333 66777777775
8053
8054
8055 No 122
8056 >1XQR_A HspBP1 protein; armadillo repeat, superhelical twist, CHAPERONE; HET: MSE; 2.1A {Homo sapiens} SCOP: a.118.1.21
8057 Probab=97.14 E-value=4.4e-07 Score=88.91 Aligned_cols=134 Identities=22% Similarity=0.180 Sum_probs=91.0 Template_Neff=11.300
8058
8059 Q NP_000290.2 246 TIPKAVQ-YLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
8060 Q Consensus 246 iL~~Ll~-lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
8061 +++.++. ++...++.++..++.+|.+++.........+...++++.+..++... +..++..++.++.+++........
8062 T Consensus 82 ~~~~l~~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~l~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~ 161 (296)
8063 T 1XQR_A 82 GMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLL 161 (296)
8064 T ss_dssp HHHHCCCCCTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHH
8065 T ss_pred cHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHH
8066 Confidence 3455555 66666677888899999998865443334444456777788777765 677888999999999865443333
8067
8068
8069 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
8070 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
8071 .+...+.++.+...+. ..+..++..++.++.+++.... ....+.. ++++.|+.++.
8072 T Consensus 162 ~~~~~~~i~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~ 219 (296)
8073 T 1XQR_A 162 QFLRLDGFSVLMRAMQ-QQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVR 219 (296)
8074 T ss_dssp HHHHTTHHHHHHHHHH-SSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHT
8075 T ss_pred HHHHCCHHHHHHHHhh-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCHHHHHHHHHc
8076 Confidence 3444456777777776 4567788889999999887543 3333333 67777777764
8077
8078
8079 No 123
8080 >4UAD_A Importin alpha import adaptor, Influenza; importin karyopherin complex NLS, PROTEIN; 2.42A {Homo sapiens}
8081 Probab=97.13 E-value=4.5e-07 Score=91.78 Aligned_cols=368 Identities=15% Similarity=0.162 Sum_probs=225.0 Template_Neff=12.900
8082
8083 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDE--SAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTN 321 (747)
8084 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~--~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~ 321 (747)
8085 .+++.+...+.+.++.++..++.+|..+..... .....+...++++.+...+.. .++.++..++.++..++......
8086 T Consensus 23 ~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~ 102 (479)
8087 T 4UAD_A 23 VITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPRVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQ 102 (479)
8088 T ss_dssp CCCHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHSTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHTTSCHHH
8089 T ss_pred hhHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCChhHhhcCcchHHHHHHHhhcCCCHHHHHHHHHHHHHHhCCCchH
8090 Confidence 456666777777778889999999988876422 111122223567777777765 66778888999998887654333
8091
8092
8093 Q NP_000290.2 322 KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVD 399 (747)
8094 Q Consensus 322 ~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~ 399 (747)
8095 ...+...++++.+..++. ..++.++..++.++..++.... ....+.. ++++.|+.++... .+
8096 T Consensus 103 ~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~ 166 (479)
8097 T 4UAD_A 103 TKIVIEAGAVPIFIELLN-SDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKS---------------TR 166 (479)
8098 T ss_dssp HHHHHHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHC---------------CC
8099 T ss_pred HHHHHHcCHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCChHHHHHHHhCCcHHHHHHHhhcC---------------Cc
8100 Confidence 333333457777788776 5567888899999998887533 2223333 5666666666521 12
8101
8102
8103 Q NP_000290.2 400 PEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVL 479 (747)
8104 Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (747)
8105 +++-..+..+|..-.. ............+.++.|...+.. -+..-...+...|
8106 T Consensus 167 ~~~~~~a~~~l~~l~~---------------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l 219 (479)
8107 T 4UAD_A 167 LTMTRNAVWALSNLCR---------------------GKNPPPEFAKVSPCLPVLSRLLFS------SDSDLLADACWAL 219 (479)
8108 T ss_dssp HHHHHHHHHHHHHHHC---------------------CCSSCCCGGGTGGGHHHHHHHTTC------CCHHHHHHHHHHH
8109 T ss_pred hHHHHHHHHHHHHHHc---------------------CCCCCchhhcccchHHHHHHHhcC------CCHHHHHHHHHHH
8110 Confidence 3333333333321110 000011111122334433333321 1111222233333
8111
8112
8113 Q NP_000290.2 480 HNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKS 559 (747)
8114 Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss 559 (747)
8115 .++.... ......+.+.++++.++.++. +
8116 T Consensus 220 ~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~ 248 (479)
8117 T 4UAD_A 220 SYLSDGP--------------------------------------------------NEKIQAVIDSGVCRRLVELLM-H 248 (479)
8118 T ss_dssp HHHTSSS--------------------------------------------------HHHHHHHHHTTCHHHHHHGGG-C
8119 T ss_pred HHHhcCc--------------------------------------------------hHHHHHHHhCCHHHHHHHHhc-C
8120 Confidence 3322100 000111234567788888887 4
8121
8122
8123 Q NP_000290.2 560 KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVF 637 (747)
8124 Q Consensus 560 ~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI 637 (747)
8125 .++.++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++... .. ..+...+++
8126 T Consensus 249 ~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~ 323 (479)
8127 T 4UAD_A 249 NDYKVASPALRAVGNIVTGDDI-----QTQVILNCSALPCLLHLLSSPKESIRKEACWTISNITAGNRAQIQAVIDANIF 323 (479)
8128 T ss_dssp SCHHHHHHHHHHHHHHTTSCHH-----HHHHHHTTTCHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCH
8129 T ss_pred CCHHhHHHHHHHHHHHhcCCHH-----HHHHHHhcChHHHHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHH
8130 Confidence 6778888999999998875332 1223334578888999998888889999999999998763 22 233445678
8131
8132
8133 Q NP_000290.2 638 PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
8134 Q Consensus 638 ~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
8135 +.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|.+++...+
8136 T Consensus 324 ~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~~~ 396 (479)
8137 T 4UAD_A 324 PVLIEILQK------AEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVM-DSKIVQVALNGLENILRLGE 396 (479)
8138 T ss_dssp HHHHHHHHH------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHGGGGCS-CHHHHHHHHHHHHHHHHHHH
8139 T ss_pred HHHHHHHhc------cCHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCcHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHHH
8140 Confidence 888888876 3678899999999999864 233444455556788888888866 78889999999999987654
8141
8142
8143 Q NP_000290.2 717 LQ 718 (747)
8144 Q Consensus 717 ~~ 718 (747)
8145 ..
8146 T Consensus 397 ~~ 398 (479)
8147 T 4UAD_A 397 QE 398 (479)
8148 T ss_dssp HH
8149 T ss_pred Hh
8150 Confidence 43
8151
8152
8153 No 124
8154 >5MFD_C YIIIM''6AII, Capsid decoration protein,pD_(KR)5; Designed armadillo repeat protein, peptide; HET: CA; 2.3A {synthetic construct}
8155 Probab=97.07 E-value=6.1e-07 Score=84.84 Aligned_cols=114 Identities=25% Similarity=0.284 Sum_probs=75.6 Template_Neff=13.300
8156
8157 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8158 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8159 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..+...........
8160 T Consensus 89 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 168 (328)
8161 T 5MFD_C 89 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 168 (328)
8162 T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
8163 T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
8164 Confidence 45556666666677788888999988876543333333344567777777777777888889999988875443332333
8165
8166
8167 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
8168 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
8169 ...++++.+...+. ..+..++..++.++..++..
8170 T Consensus 169 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 202 (328)
8171 T 5MFD_C 169 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASG 202 (328)
8172 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHHTS
8173 T ss_pred HHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHcC
8174 Confidence 33456666777775 45566777777777777653
8175
8176
8177 No 125
8178 >6HB3_B Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; 3.0A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
8179 Probab=97.07 E-value=7e-07 Score=92.28 Aligned_cols=121 Identities=9% Similarity=-0.026 Sum_probs=77.4 Template_Neff=10.100
8180
8181 Q NP_000290.2 246 TIPKAVQYLSS---QDEKYQAIGAYYIQHTCFQDESAKQQVY--QLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTT 320 (747)
8182 Q Consensus 246 iL~~Ll~lL~s---sd~eVr~sAL~aLsnLs~~~~~~~~~li--~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~ 320 (747)
8183 .++.|+.++.. .+..++..++.+|.++... ......+. ..+.++.++.++...+..++..++.+|.+++....
8184 T Consensus 52 ~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~-~~~~~~l~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~nl~~~~~- 129 (369)
8185 T 6HB3_B 52 PIKDIIKMIMDPEHGTRVIIQQGVTILVNLSED-KLVRNIILSDDKKFLKFLVWKIVDLTNPNADIMCILLSNLAKDDG- 129 (369)
8186 T ss_pred cHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCC-HHHHHHHHhccCCcHHHHHHHhcCCCHHHHHHHHHHHHHHcCChH-
8187 Confidence 56667777743 3567888899999998754 33344444 56788888888877667788888999988886432
8188
8189
8190 Q NP_000290.2 321 NKLET-------------------------RRQNGIREAVSLLRRTG------NAEIQKQLTGLLWNLSSTDELKEELIA 369 (747)
8191 Q Consensus 321 ~~~~l-------------------------l~~~IL~~Ll~lL~ss~------d~eVr~~AL~aLsnLas~~~~~~~Lve 369 (747)
8192 ....+ ...++++.++.++. .. +..++..++.+|.+++........+.+
8193 T Consensus 130 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~Lv~~l~-~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~l~~ 208 (369)
8194 T 6HB3_B 130 ILAVLNIKRNSSGEEVDDGLKLAALNKEVFKSLRAMDCLMDCFV-KGYDKKLTKYASFNYLAFFFADISRFKLGRMYFIE 208 (369)
8195 T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHCCcHHHHHHHhc-CCCCccCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
8196 Confidence 11212 11345666666665 32 345666777777777765444444444
8197
8198
8199 No 126
8200 >3OPB_A SWI5-dependent HO expression protein 4; HEAT and ARM fold, Myosin; 2.9A {Saccharomyces cerevisiae}
8201 Probab=97.06 E-value=7.2e-07 Score=100.91 Aligned_cols=156 Identities=12% Similarity=0.164 Sum_probs=96.5 Template_Neff=10.500
8202
8203 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKE------KGLPQIARLLQSGNSDVVRSGASLL 619 (747)
8204 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~------giI~~Ll~LL~s~d~eVr~~AL~aL 619 (747)
8205 .++++.|+.++. +.+..++..++.+|.+++..... ....+.+. ++++.|+.++.+.++.++..++++|
8206 T Consensus 605 ~~~~~~L~~ll~-~~~~~v~~~a~~~L~~L~~~~~~-----~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L 678 (778)
8207 T 3OPB_A 605 KVYWSTIENLML-DENVPLQRSTLELISNMMSHPLT-----IAAKFFNLENPQSLRNFNILVKLLQLSDVESQRAVAAIF 678 (778)
8208 T ss_dssp HHHHHHHHHGGG-CSSHHHHHHHHHHHHHHHTSGGG-----TGGGTSCCSSHHHHHHHHHHHHGGGCSCHHHHHHHHHHH
8209 T ss_pred ccHHHHHHHHhh-CCCHHHHHHHHHHHHHHhcChhH-----HHHHhcCCCChhHHHhHHHHHHHhcCCCHHHHHHHHHHH
8210 Confidence 356777777776 35677788888888888864321 12222332 6778888888777778888888888
8211
8212
8213 Q NP_000290.2 620 SNMSRH-PLL-HRVMG-NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA----K-QYFS-SSMLNNIIN 690 (747)
8214 Q Consensus 620 snLa~~-~e~-~~ll~-~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~----~-~Lve-~giL~~Ll~ 690 (747)
8215 ++++.. +.. ...+. .++++.|+.++.+.. .+..++..++++|.+++...+... . .+.+ .++++.|..
8216 T Consensus 679 ~~l~~~~~~~~~~l~~~~~~i~~L~~~L~~~~----~~~~l~~~a~~aL~~L~~~~~~~~~~~~~~~l~~~~~~~~~L~~ 754 (778)
8217 T 3OPB_A 679 ANIATTIPLIAKELLTKKELIENAIQVFADQI----DDIELRQRLLMLFFGLFEVIPDNGTNEVYPLLQENQKLKDALNM 754 (778)
8218 T ss_dssp HHHHHHCHHHHHHHTTCHHHHHHHHHHHHHTT----TCHHHHHHHHHHHHHHHTTCCSTTTTSCCHHHHSCHHHHHHHHH
8219 T ss_pred HHHHccCHHHHHHHhcCccHHHHHHHHHHhCC----CCHHHHHHHHHHHHHHHhhCCcCCCccchhHHhcCHHHHHHHHH
8220 Confidence 888755 222 23332 567777777776510 145678888888888886533222 0 1222 256777777
8221
8222
8223 Q NP_000290.2 691 LCRSSA-SPKAAEAARLLLSDM 711 (747)
8224 Q Consensus 691 LL~s~~-d~eVr~aAL~aLsnL 711 (747)
8225 ++.... ++.++..+..+|.++
8226 T Consensus 755 ~l~~~~~~~~~~~~~~~~L~~l 776 (778)
8227 T 3OPB_A 755 SLKRGDSGPEFSAAIPVILAKI 776 (778)
8228 T ss_dssp HHSSSSSCSSTTSHHHHHHTTC
8229 T ss_pred HHhhCCCCHHHHHHHHHHHHhc
8230 Confidence 776431 335555566555543
8231
8232
8233 No 127
8234 >4HXT_A De Novo Protein OR329; Structural Genomics, PSI-Biology, Protein Structure; 1.95A {artificial gene}
8235 Probab=97.02 E-value=7.7e-07 Score=80.85 Aligned_cols=113 Identities=29% Similarity=0.332 Sum_probs=76.4 Template_Neff=13.200
8236
8237 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
8238 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
8239 ++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..++.........+.
8240 T Consensus 4 ~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~ 83 (252)
8241 T 4HXT_A 4 VEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIV 83 (252)
8242 T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
8243 T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHCCHHHHHHHHhhCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
8244 Confidence 44556666667778888999999988765433333334446677777777777778888999999988765433333333
8245
8246
8247 Q NP_000290.2 327 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
8248 Q Consensus 327 ~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
8249 ..++++.+...+. ..++.++..++.++.+++..
8250 T Consensus 84 ~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 116 (252)
8251 T 4HXT_A 84 DAGGVEVLVKLLT-STDSEVQKEAARALANIASG 116 (252)
8252 T ss_dssp HTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTS
8253 T ss_pred HCChHHHHHHHcc-CCCHHHHHHHHHHHHHHHcC
8254 Confidence 3456667777775 45567777777887777653
8255
8256
8257 No 128
8258 >3GQ2_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.18A {Bos taurus}
8259 Probab=97.01 E-value=9.1e-07 Score=98.43 Aligned_cols=136 Identities=15% Similarity=0.144 Sum_probs=91.1 Template_Neff=10.100
8260
8261 Q NP_000290.2 245 LTIPKAVQYLSS--QDEKYQAIGAYYIQHTCFQDES-----------------AKQQVY-QLGGICKLVDLLRSPNQNVQ 304 (747)
8262 Q Consensus 245 ~iL~~Ll~lL~s--sd~eVr~sAL~aLsnLs~~~~~-----------------~~~~li-~~~IL~~Ll~lL~s~d~eVr 304 (747)
8263 .+++.|+..+.. .+..+...++.+|..++..... ....+. ..+.++.++.++...+..++
8264 T Consensus 60 ~~l~~Li~~L~~~~~d~~~~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Ll~ll~~~~~~~~ 139 (651)
8265 T 3GQ2_A 60 QAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVR 139 (651)
8266 T ss_dssp HHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHCCSSSCC----------CHHHHHHHHHHTSHHHHHTHHHHTTCCCHHHH
8267 T ss_pred cHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCChHhhhhcccccchHHHHHHHHHHHhcCchHHHHHHHccCCCHHHH
8268 Confidence 456667777764 4567788888888888764332 112222 35667777777777777888
8269
8270
8271 Q NP_000290.2 305 QAAAGALRNLVFRSTTNKL-ETR-RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVI 380 (747)
8272 Q Consensus 305 ~~AL~aLs~La~~~~~~~~-~ll-~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~ 380 (747)
8273 ..++.+|..++........ .+. ..+.+..++.++. ..+..++..++.+|.+++.. ......+.. ++++.|+.++.
8274 T Consensus 140 ~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~-~~~~~i~~~a~~~L~~l~~~~~~~~~~l~~~g~~~~L~~ll~ 218 (651)
8275 T 3GQ2_A 140 WPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA-DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIIT 218 (651)
8276 T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHGGGGG-CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
8277 T ss_pred HHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCChHHHHHHHHH
8278 Confidence 9999999988865432211 222 3456778888886 55677888999999999873 333333333 88888888886
8279
8280
8281 Q NP_000290.2 381 I 381 (747)
8282 Q Consensus 381 ~ 381 (747)
8283 .
8284 T Consensus 219 ~ 219 (651)
8285 T 3GQ2_A 219 E 219 (651)
8286 T ss_dssp H
8287 T ss_pred H
8288 Confidence 4
8289
8290
8291 No 129
8292 >3GRL_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.0A {Bos taurus}
8293 Probab=97.01 E-value=9.1e-07 Score=98.43 Aligned_cols=136 Identities=15% Similarity=0.144 Sum_probs=90.5 Template_Neff=10.100
8294
8295 Q NP_000290.2 245 LTIPKAVQYLSS--QDEKYQAIGAYYIQHTCFQDES-----------------AKQQVY-QLGGICKLVDLLRSPNQNVQ 304 (747)
8296 Q Consensus 245 ~iL~~Ll~lL~s--sd~eVr~sAL~aLsnLs~~~~~-----------------~~~~li-~~~IL~~Ll~lL~s~d~eVr 304 (747)
8297 .+++.|+..+.. .+..+...++.+|..++..... ....+. ..+.++.++.++...+..++
8298 T Consensus 60 ~~l~~Li~~L~~~~~d~~~~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Ll~ll~~~~~~~~ 139 (651)
8299 T 3GRL_A 60 QAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVR 139 (651)
8300 T ss_dssp CCHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHH
8301 T ss_pred cHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCChHhhhhcccccchHHHHHHHHHHHhcCchHHHHHHHccCCCHHHH
8302 Confidence 456667777764 4567788888888888764332 112222 35667777777777777888
8303
8304
8305 Q NP_000290.2 305 QAAAGALRNLVFRSTTNKL-ETR-RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVI 380 (747)
8306 Q Consensus 305 ~~AL~aLs~La~~~~~~~~-~ll-~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~ 380 (747)
8307 ..++.+|..++........ .+. ..+.+..++.++. ..+..++..++.+|.+++.. ......+.. ++++.|+.++.
8308 T Consensus 140 ~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~-~~~~~i~~~a~~~L~~l~~~~~~~~~~l~~~g~~~~L~~ll~ 218 (651)
8309 T 3GRL_A 140 WPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA-DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIIT 218 (651)
8310 T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGG-CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
8311 T ss_pred HHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCChHHHHHHHHH
8312 Confidence 9999999988865432211 222 3456778888886 55677888999999999873 333333333 88888888886
8313
8314
8315 Q NP_000290.2 381 I 381 (747)
8316 Q Consensus 381 ~ 381 (747)
8317 .
8318 T Consensus 219 ~ 219 (651)
8319 T 3GRL_A 219 E 219 (651)
8320 T ss_dssp H
8321 T ss_pred H
8322 Confidence 4
8323
8324
8325 No 130
8326 >4HXT_A De Novo Protein OR329; Structural Genomics, PSI-Biology, Protein Structure; 1.95A {artificial gene}
8327 Probab=97.01 E-value=8.1e-07 Score=80.69 Aligned_cols=114 Identities=27% Similarity=0.320 Sum_probs=76.2 Template_Neff=13.200
8328
8329 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8330 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8331 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+.+.+..++..++.++..++...+.....+
8332 T Consensus 45 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 124 (252)
8333 T 4HXT_A 45 GVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 124 (252)
8334 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
8335 T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCChHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
8336 Confidence 45556666666677888889999998876544333333444667777777777777888889999988876443332233
8337
8338
8339 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
8340 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
8341 ...++++.+...+. ..++.++..++.++..++..
8342 T Consensus 125 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 158 (252)
8343 T 4HXT_A 125 VDAGGVEVLVKLLT-STDSEVQKEAARALANIASG 158 (252)
8344 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTS
8345 T ss_pred HHCCHHHHHHHHhh-CCCHHHHHHHHHHHHHHHcC
8346 Confidence 33356666666665 45567777788888877764
8347
8348
8349 No 131
8350 >4PLS_B Arm00010; PEPTIDE BINDING PROTEIN, designed armadillo; HET: CA; 2.35A {synthetic construct}
8351 Probab=97.00 E-value=8.3e-07 Score=82.05 Aligned_cols=114 Identities=25% Similarity=0.284 Sum_probs=75.7 Template_Neff=13.200
8352
8353 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8354 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8355 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.++.++..++.++..++.........+
8356 T Consensus 44 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 123 (281)
8357 T 4PLS_B 44 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 123 (281)
8358 T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
8359 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
8360 Confidence 45566666666777888889999998876443333333444577777777777777888888898888876433332333
8361
8362
8363 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
8364 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
8365 ...++++.+...+. ..++.++..++.++..++..
8366 T Consensus 124 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 157 (281)
8367 T 4PLS_B 124 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASG 157 (281)
8368 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTS
8369 T ss_pred HHCCHHHHHHHHcc-CCCHHHHHHHHHHHHHHHcC
8370 Confidence 33456666777665 44566777777777776653
8371
8372
8373 No 132
8374 >5IZA_A Adenomatous polyposis coli protein, ACE-GLY-GLY-GLU-ALA-LEU-ALA-TRP-NH2; APC, ASEF, Colon CANCER, Drug; 1.5A {Homo sapiens}
8375 Probab=96.99 E-value=9.5e-07 Score=87.41 Aligned_cols=114 Identities=22% Similarity=0.254 Sum_probs=75.1 Template_Neff=12.000
8376
8377 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
8378 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
8379 .+++.+..++.+.++.++..++.++.+++.. .......+...++++.+..++.. .+..++..++.+|.+++.......
8380 T Consensus 127 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~ 206 (354)
8381 T 5IZA_A 127 GCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 206 (354)
8382 T ss_dssp HHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHH
8383 T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCChHhH
8384 Confidence 3455666677766778888999999998874 22223334445677778888776 677888889999999886533333
8385
8386
8387 Q NP_000290.2 323 LETRR-QNGIREAVSLLRR---TGNAEIQKQLTGLLWNLS 358 (747)
8388 Q Consensus 323 ~~ll~-~~IL~~Ll~lL~s---s~d~eVr~~AL~aLsnLa 358 (747)
8389 ..+.. .++++.+..++.. ..+..++..++.++..+.
8390 T Consensus 207 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~L~~l~ 246 (354)
8391 T 5IZA_A 207 ADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVS 246 (354)
8392 T ss_dssp HHHHTSTTHHHHHHHHTCSSCSSCCHHHHHHHHHHHHHHH
8393 T ss_pred HHHHhhccHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHH
8394 Confidence 33444 4667777777651 112456666777777765
8395
8396
8397 No 133
8398 >5IZ8_A Adenomatous polyposis coli protein, ACE-ALA-GLY-GLU-ALA-LEU-ALA-ASP-NH2; APC, ASEF, Colon CANCER, Drug; HET: PGE; 3.06A {Homo sapiens}
8399 Probab=96.97 E-value=1e-06 Score=87.19 Aligned_cols=113 Identities=22% Similarity=0.270 Sum_probs=74.6 Template_Neff=12.000
8400
8401 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
8402 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
8403 +++.+..++.+.++.++..++.++.+++.. .......+...++++.+..++.. .+..++..++.+|.+++........
8404 T Consensus 128 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~ 207 (354)
8405 T 5IZ8_A 128 CMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA 207 (354)
8406 T ss_dssp HHHHHHHGGGSSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTSCHHHHH
8407 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCChHhHH
8408 Confidence 455666677666778888999999998874 22223334445677778888776 6778888899999998865333333
8409
8410
8411 Q NP_000290.2 324 ETRR-QNGIREAVSLLRR---TGNAEIQKQLTGLLWNLS 358 (747)
8412 Q Consensus 324 ~ll~-~~IL~~Ll~lL~s---s~d~eVr~~AL~aLsnLa 358 (747)
8413 .+.. .++++.+..++.. ..+..++..++.++..+.
8414 T Consensus 208 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~L~~l~ 246 (354)
8415 T 5IZ8_A 208 DICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVS 246 (354)
8416 T ss_dssp HHHTSTTHHHHHHHHTTCCCTTSCCHHHHHHHHHHHHHH
8417 T ss_pred HHHhhccHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHH
8418 Confidence 3444 4667777777651 112456666777777765
8419
8420
8421 No 134
8422 >6SA7_B DARPin-Armadillo fusion C8long83; protein fusion, DARPin, Armadillo, shared; 3.3A {synthetic construct}
8423 Probab=96.96 E-value=1.1e-06 Score=90.60 Aligned_cols=135 Identities=25% Similarity=0.264 Sum_probs=91.1 Template_Neff=12.500
8424
8425 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8426 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8427 +++.+...+.+.++.++..++.+|.+++.........+...++++.+..++...++.++..++.+|..++.........+
8428 T Consensus 342 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 421 (510)
8429 T 6SA7_B 342 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 421 (510)
8430 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
8431 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
8432 Confidence 34445555556667788888888888876544433334445677788888877778888899999998875544433344
8433
8434
8435 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVII 381 (747)
8436 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~ 381 (747)
8437 ...++++.+..++. ..++.++..++.++..++.... ....+.. ++++.|..++..
8438 T Consensus 422 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 478 (510)
8439 T 6SA7_B 422 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSH 478 (510)
8440 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGC
8441 T ss_pred HHcCcHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCchHHHHHHHCCHHHHHHHHhhc
8442 Confidence 44567778888886 5677889999999999985432 2222333 667777776653
8443
8444
8445 No 135
8446 >4V3Q_A YIII_M4_AII; DE NOVO PROTEIN, PROTEIN ENGINEERING; HET: GOL, CA; 1.8A {SYNTHETIC CONSTRUCT}
8447 Probab=96.95 E-value=1.1e-06 Score=80.29 Aligned_cols=135 Identities=24% Similarity=0.251 Sum_probs=89.9 Template_Neff=12.900
8448
8449 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
8450 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
8451 .+++.+...+.+.+..++..++.++.+++.........+...++++.+...+.+.+..++..++.++..++.........
8452 T Consensus 92 ~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 171 (247)
8453 T 4V3Q_A 92 GALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQA 171 (247)
8454 T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
8455 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHH
8456 Confidence 34556666666667788888899998887654433333344567777888777777788888999998887654333333
8457
8458
8459 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
8460 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
8461 ....++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|..++.
8462 T Consensus 172 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 228 (247)
8463 T 4V3Q_A 172 VIDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQKQAVKEAGALEKLEQLQS 228 (247)
8464 T ss_dssp HHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT
8465 T ss_pred HHHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHh
8466 Confidence 334456777777776 5567788889999998886532 2222333 66677776665
8467
8468
8469 No 136
8470 >5Z8H_A Adenomatous polyposis coli protein, Peptide; APC, inhibitor, PROTEIN BINDING-INHIBITOR complex; HET: PHQ, GOL; 1.79A {Homo sapiens}
8471 Probab=96.93 E-value=1.2e-06 Score=84.95 Aligned_cols=134 Identities=21% Similarity=0.263 Sum_probs=83.9 Template_Neff=12.500
8472
8473 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
8474 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
8475 .+++.+...+.+.++.++..++.++.+++.. .......+...++++.+..++.. .++.++..++.++.+++.......
8476 T Consensus 122 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~ 201 (339)
8477 T 5Z8H_A 122 GCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 201 (339)
8478 T ss_pred ChHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCCHHHHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHH
8479 Confidence 3455666667666778888999999998874 22223334445677778887776 577788889999999886444333
8480
8481
8482 Q NP_000290.2 323 LETRR-QNGIREAVSLLRRTGN----AEIQKQLTGLLWNLSS----TDELKEELIA-DALPVLADRV 379 (747)
8483 Q Consensus 323 ~~ll~-~~IL~~Ll~lL~ss~d----~eVr~~AL~aLsnLas----~~~~~~~Lve-giLe~Lv~LL 379 (747)
8484 ..+.. .++++.+..++. ..+ ..++..++.++.++.. .......+.. ++++.++.++
8485 T Consensus 202 ~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l 267 (339)
8486 T 5Z8H_A 202 ADICAVDGALAFLVGTLT-YRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHL 267 (339)
8487 T ss_pred HHHHHhcChHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHhhccCHHHHHHHHHCCHHHHHHHHH
8488 Confidence 34444 466777777775 222 5667777777777752 2222222222 5555555555
8489
8490
8491 No 137
8492 >5AEI_B DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII; DE NOVO PROTEIN, PROTEIN-PEPTIDE COMPLEX; HET: CA, ACT; 1.83A {SYNTHETIC CONSTRUCT}
8493 Probab=96.89 E-value=1.4e-06 Score=80.58 Aligned_cols=112 Identities=27% Similarity=0.322 Sum_probs=75.3 Template_Neff=13.200
8494
8495 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8496 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8497 +++.+...+.+.+..++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
8498 T Consensus 173 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 252 (286)
8499 T 5AEI_B 173 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAV 252 (286)
8500 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
8501 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHccCCCHHHHHHHHHHHHHHhCCCHHHHHHH
8502 Confidence 45556666666677788888999988876544333333344567777777777777888889999988885544333333
8503
8504
8505 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
8506 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
8507 ...++++.+...+. ..++.++..++.++..++
8508 T Consensus 253 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 284 (286)
8509 T 5AEI_B 253 KEAGALEKLEQLQS-HENEKIQKEAQEALEKLQ 284 (286)
8510 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHH
8511 T ss_pred HHcCHHHHHHHHhh-CCCHHHHHHHHHHHHHHh
8512 Confidence 34456677777776 456677777877777664
8513
8514
8515 No 138
8516 >5IZA_A Adenomatous polyposis coli protein, ACE-GLY-GLY-GLU-ALA-LEU-ALA-TRP-NH2; APC, ASEF, Colon CANCER, Drug; 1.5A {Homo sapiens}
8517 Probab=96.88 E-value=1.5e-06 Score=85.84 Aligned_cols=124 Identities=24% Similarity=0.343 Sum_probs=84.2 Template_Neff=12.000
8518
8519 Q NP_000290.2 258 DEKYQAIGAYYIQHTCFQDESAKQQVYQ-LGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKLETRRQNGIREAV 335 (747)
8520 Q Consensus 258 d~eVr~sAL~aLsnLs~~~~~~~~~li~-~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~~ll~~~IL~~Ll 335 (747)
8521 +..++..++.++.+++.........+.. .++++.+..++...++.++..++.++.+++.. .......+...++++.+.
8522 T Consensus 97 ~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~ 176 (354)
8523 T 5IZA_A 97 SITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALM 176 (354)
8524 T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHH
8525 T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHccchHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHH
8526 Confidence 5677888888888887644333333333 46777888888777788889999999998864 222233344456777788
8527
8528
8529 Q NP_000290.2 336 SLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA--DALPVLADRVII 381 (747)
8530 Q Consensus 336 ~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve--giLe~Lv~LL~~ 381 (747)
8531 .++....++.++..++.++.+++.. ......+.. ++++.|+.++..
8532 T Consensus 177 ~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 225 (354)
8533 T 5IZA_A 177 ECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTY 225 (354)
8534 T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTSTTHHHHHHHHTCS
8535 T ss_pred HHHHhcCCHHHHHHHHHHHHHHHcCChHhHHHHHhhccHHHHHHHHHhh
8536 Confidence 8876225677888899999999876 444434433 667777777664
8537
8538
8539 No 139
8540 >5IZ8_A Adenomatous polyposis coli protein, ACE-ALA-GLY-GLU-ALA-LEU-ALA-ASP-NH2; APC, ASEF, Colon CANCER, Drug; HET: PGE; 3.06A {Homo sapiens}
8541 Probab=96.88 E-value=1.6e-06 Score=85.78 Aligned_cols=124 Identities=24% Similarity=0.343 Sum_probs=84.2 Template_Neff=12.000
8542
8543 Q NP_000290.2 258 DEKYQAIGAYYIQHTCFQDESAKQQVYQ-LGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKLETRRQNGIREAV 335 (747)
8544 Q Consensus 258 d~eVr~sAL~aLsnLs~~~~~~~~~li~-~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~~ll~~~IL~~Ll 335 (747)
8545 +..++..++.++.+++.........+.. .++++.+..++...++.++..++.++.+++.. .......+...++++.+.
8546 T Consensus 97 ~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~ 176 (354)
8547 T 5IZ8_A 97 SITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALM 176 (354)
8548 T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGSSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHH
8549 T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHccchHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHH
8550 Confidence 5677888888888887644333333333 46777888888777788888999999998864 222233344456777788
8551
8552
8553 Q NP_000290.2 336 SLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA--DALPVLADRVII 381 (747)
8554 Q Consensus 336 ~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve--giLe~Lv~LL~~ 381 (747)
8555 .++....++.++..++.+|.+++.. ......+.. ++++.|+.++..
8556 T Consensus 177 ~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 225 (354)
8557 T 5IZ8_A 177 ECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTY 225 (354)
8558 T ss_dssp HHHHHCCSHHHHHHHHHHHHHHHTSCHHHHHHHHTSTTHHHHHHHHTTC
8559 T ss_pred HHHHhcCCHHHHHHHHHHHHHHHcCChHhHHHHHhhccHHHHHHHHHhh
8560 Confidence 8876225677888899999999876 444333433 667777777664
8561
8562
8563 No 140
8564 >3NMZ_A APC variant protein, Rho guanine; protein-protein complex, armadillo repeats, CELL; 3.01A {Homo sapiens}
8565 Probab=96.87 E-value=1.6e-06 Score=88.90 Aligned_cols=135 Identities=18% Similarity=0.233 Sum_probs=88.1 Template_Neff=12.000
8566
8567 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQ-LGGICKLVDLLR----SPNQNVQQAAAGALRNLV---F 316 (747)
8568 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~-~~IL~~Ll~lL~----s~d~eVr~~AL~aLs~La---~ 316 (747)
8569 +++.+..++. ..+..++..++.+|.+++...+.....+.. .++++.+..++. ..+..++..++.++.+++ .
8570 T Consensus 287 ~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~a~~~l~~l~~~~~ 366 (458)
8571 T 3NMZ_A 287 SVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIA 366 (458)
8572 T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCchhHHHHHHhcChHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHhc
8573 Confidence 4555666665 456778888999999988743333333333 566777777765 224566777888887765 2
8574
8575
8576 Q NP_000290.2 317 RSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS-TDELKEELIA-DALPVLADRVII 381 (747)
8577 Q Consensus 317 ~~~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas-~~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
8578 ........+...++++.+..++. ..++.++..++.+|..++. .......+.. ++++.|..++..
8579 T Consensus 367 ~~~~~~~~l~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~~~~L~~ll~~ 432 (458)
8580 T 3NMZ_A 367 TNEDHRQILRENNCLQTLLQHLK-SHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHS 432 (458)
8581 T ss_pred CCHHHHHHHHHCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHHhC
8582 Confidence 22223333344467777888886 5567889999999999987 3444444544 788888887754
8583
8584
8585 No 141
8586 >6SA7_B DARPin-Armadillo fusion C8long83; protein fusion, DARPin, Armadillo, shared; 3.3A {synthetic construct}
8587 Probab=96.87 E-value=1.6e-06 Score=89.20 Aligned_cols=134 Identities=26% Similarity=0.306 Sum_probs=91.2 Template_Neff=12.500
8588
8589 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8590 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8591 +++.+...+.+.+..++..++.+|.+++.........+...++++.+...+.+.++.++..++.+|..++.........+
8592 T Consensus 300 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 379 (510)
8593 T 6SA7_B 300 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 379 (510)
8594 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
8595 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHHHhCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHH
8596 Confidence 45566666666677888889999998876544333344445677778888877778888899999999886544333333
8597
8598
8599 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
8600 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
8601 ...++++.+...+. ..++.++..++.+|..++.... ....+.. ++++.|+.++.
8602 T Consensus 380 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 435 (510)
8603 T 6SA7_B 380 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 435 (510)
8604 T ss_dssp HHTTHHHHHHHHHT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
8605 T ss_pred HHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHhc
8606 Confidence 44467777887776 5577888889999998865432 2223333 66777777664
8607
8608
8609 No 142
8610 >5TBK_C Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
8611 Probab=96.87 E-value=1.7e-06 Score=90.04 Aligned_cols=367 Identities=17% Similarity=0.192 Sum_probs=215.7 Template_Neff=12.200
8612
8613 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
8614 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
8615 +++.+...+... ++.++..++.++..++.........+...++++.+..++.+.++.++..++.++..++.........
8616 T Consensus 115 ~i~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 194 (521)
8617 T 5TBK_C 115 ILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDY 194 (521)
8618 T ss_dssp HHHHHHHHHHCCSCHHHHHHHHHHHHHHHTSCHHHHHHHHTTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHHHH
8619 T ss_pred cHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
8620 Confidence 445555555543 6678888888888887654333333334467777888887777888999999999888654433333
8621
8622
8623 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
8624 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
8625 +...+++..+...+....+..++..++.++..++.......... .++++.+..++... ++++
8626 T Consensus 195 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v 258 (521)
8627 T 5TBK_C 195 VISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHT----------------DVNI 258 (521)
8628 T ss_dssp HHHTTCHHHHHTTCCTTSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCS----------------CHHH
8629 T ss_pred HHHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhhCC----------------CHHH
8630 Confidence 33445677777777533344678888888888876533221111 15566666665431 2334
8631
8632
8633 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
8634 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
8635 ...+..+|..-... .+ ..++.+. -.+++..|...+.. .+..-...++..|.++
8636 T Consensus 259 ~~~a~~~L~~l~~~------~~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l 311 (521)
8637 T 5TBK_C 259 LVDTVWALSYLTDA------GN--------------EQIQMVI-DSGIVPHLVPLLSH------QEVKVQTAALRAVGNI 311 (521)
8638 T ss_dssp HHHHHHHHHHHHHH------CH--------------HHHHHHH-HTTCHHHHGGGGGC------SSHHHHHHHHHHHHHH
8639 T ss_pred HHHHHHHHHHHhcc------Ch--------------HHHHHHH-HCChHHHHHHHhcC------CCHHHHHHHHHHHHHH
8640 Confidence 33343333221100 00 0000000 02333434333321 0111112222223332
8641
8642
8643 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
8644 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
8645 ...- ......+.+.++++.|..++. +.++
8646 T Consensus 312 ~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~ 340 (521)
8647 T 5TBK_C 312 VTGT--------------------------------------------------DEQTQVVLNCDALSHFPALLT-HPKE 340 (521)
8648 T ss_dssp HTSC--------------------------------------------------HHHHHHHHHTTCGGGHHHHHT-CSCH
8649 T ss_pred HcCC--------------------------------------------------HHHHHHHHhCCHHHhHHHHhh-CCCH
8650 Confidence 2110 000112234467788888887 4677
8651
8652
8653 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGNQVFPE 639 (747)
8654 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~giI~~ 639 (747)
8655 .++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...++++.
8656 T Consensus 341 ~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~~~~ 415 (521)
8657 T 5TBK_C 341 KINKEAVWFLSNITAGNQQ-----QVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPP 415 (521)
8658 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHTTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTTCHHH
8659 T ss_pred HHHHHHHHHHHHHhCCCHH-----HHHHHHHCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHH
8660 Confidence 8888999999999865332 223334557888888888887888999999999999864 2 11 22233467788
8661
8662
8663 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA----KQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
8664 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~----~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
8665 |..++.. .++.++..++.+|.+++...+... ..+.+.++++.|..++.+. ++.++..++.+|.+++...
8666 T Consensus 416 L~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a~~~L~~l~~~~ 488 (521)
8667 T 5TBK_C 416 FCNLLTV------KDAQVVQVVLDGLSNILKMAEDEAETIGNLIEECGGLEKIEQLQNHE-NEDIYKLAYEIIDQFFSSD 488 (521)
8668 T ss_dssp HHGGGGS------SCHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHTTHHHHHHHHCSTT-CHHHHHHHHHHHHHHCCC-
8669 T ss_pred HHHHcCC------CCHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHCCHHHHHHHHhcCC-CHHHHHHHHHHHHHhcCCC
8670 Confidence 8888765 367888899999999887533211 2233446778888888766 7889999999999999766
8671
8672
8673 Q NP_000290.2 716 ELQ 718 (747)
8674 Q Consensus 716 ~~~ 718 (747)
8675 +..
8676 T Consensus 489 ~~~ 491 (521)
8677 T 5TBK_C 489 DID 491 (521)
8678 T ss_dssp ---
8679 T ss_pred CCC
8680 Confidence 543
8681
8682
8683 No 143
8684 >5TBK_D Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
8685 Probab=96.87 E-value=1.7e-06 Score=90.04 Aligned_cols=367 Identities=17% Similarity=0.192 Sum_probs=215.0 Template_Neff=12.200
8686
8687 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
8688 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
8689 +++.+...+... ++.++..++.++..++.........+...++++.+..++.+.++.++..++.++..++.........
8690 T Consensus 115 ~i~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 194 (521)
8691 T 5TBK_D 115 ILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDY 194 (521)
8692 T ss_dssp HHHHHHHHHHCCSCHHHHHHHHHHHHHHHTSCHHHHHHHHTTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHHHH
8693 T ss_pred cHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
8694 Confidence 445555555543 6678888888888887654333333334467777888887777888999999999888654433333
8695
8696
8697 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
8698 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
8699 +...+++..+...+....+..++..++.++..++.......... .++++.+..++... ++++
8700 T Consensus 195 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v 258 (521)
8701 T 5TBK_D 195 VISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHT----------------DVNI 258 (521)
8702 T ss_dssp HHHTCCHHHHHTTCCTTSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCS----------------CHHH
8703 T ss_pred HHHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhhCC----------------CHHH
8704 Confidence 33445677777777533344678888888888876533221111 15566666665431 2334
8705
8706
8707 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
8708 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
8709 ...+..+|..-... .+ ..++.+. -.+++..|...+.. .+..-...++..|.++
8710 T Consensus 259 ~~~a~~~L~~l~~~------~~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l 311 (521)
8711 T 5TBK_D 259 LVDTVWALSYLTDA------GN--------------EQIQMVI-DSGIVPHLVPLLSH------QEVKVQTAALRAVGNI 311 (521)
8712 T ss_dssp HHHHHHHHHHHHHH------CH--------------HHHHHHH-HTTCHHHHGGGGGC------SSHHHHHHHHHHHHHH
8713 T ss_pred HHHHHHHHHHHhcc------Ch--------------HHHHHHH-HCChHHHHHHHhcC------CCHHHHHHHHHHHHHH
8714 Confidence 33343333221100 00 0000000 02333434333321 0111112222223332
8715
8716
8717 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
8718 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
8719 ...- ......+.+.++++.|..++. +.++
8720 T Consensus 312 ~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~ 340 (521)
8721 T 5TBK_D 312 VTGT--------------------------------------------------DEQTQVVLNCDALSHFPALLT-HPKE 340 (521)
8722 T ss_dssp HTSC--------------------------------------------------HHHHHHHHHTTCGGGHHHHHH-CSCH
8723 T ss_pred HcCC--------------------------------------------------HHHHHHHHhCCHHHhHHHHhh-CCCH
8724 Confidence 2110 000112234467788888887 4677
8725
8726
8727 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGNQVFPE 639 (747)
8728 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~giI~~ 639 (747)
8729 .++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...++++.
8730 T Consensus 341 ~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~~~~ 415 (521)
8731 T 5TBK_D 341 KINKEAVWFLSNITAGNQQ-----QVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPP 415 (521)
8732 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHTTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTTCHHH
8733 T ss_pred HHHHHHHHHHHHHhCCCHH-----HHHHHHHCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHH
8734 Confidence 8888999999999865332 223334557888888888887888999999999999864 2 11 22233467788
8735
8736
8737 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA----KQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
8738 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~----~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
8739 |..++.. .++.++..++.+|.+++...+... ..+.+.++++.|..++.+. ++.++..++.+|.+++...
8740 T Consensus 416 L~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a~~~L~~l~~~~ 488 (521)
8741 T 5TBK_D 416 FCNLLTV------KDAQVVQVVLDGLSNILKMAEDEAETIGNLIEECGGLEKIEQLQNHE-NEDIYKLAYEIIDQFFSSD 488 (521)
8742 T ss_dssp HHGGGGS------SCHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHCC--
8743 T ss_pred HHHHcCC------CCHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHCCHHHHHHHHhcCC-CHHHHHHHHHHHHHhcCCC
8744 Confidence 8888765 367888899999999887533211 2233446778888888766 7889999999999999766
8745
8746
8747 Q NP_000290.2 716 ELQ 718 (747)
8748 Q Consensus 716 ~~~ 718 (747)
8749 +..
8750 T Consensus 489 ~~~ 491 (521)
8751 T 5TBK_D 489 DID 491 (521)
8752 T ss_dssp ---
8753 T ss_pred CCC
8754 Confidence 543
8755
8756
8757 No 144
8758 >6HB1_A Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; 2.33A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
8759 Probab=96.86 E-value=1.8e-06 Score=89.00 Aligned_cols=169 Identities=9% Similarity=0.050 Sum_probs=120.8 Template_Neff=10.100
8760
8761 Q NP_000290.2 547 DAIRTYLNLMGK--SKKDATLEACAGALQNLTASKGLMSSGMSQLIGL--KEKGLPQIARLLQSGNSDVVRSGASLLSNM 622 (747)
8762 Q Consensus 547 G~I~~LL~LL~s--s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~lli--e~giI~~Ll~LL~s~d~eVr~~AL~aLsnL 622 (747)
8763 ++++.|+.++.. +.++.++..++++|.+++.... ....+. +.++++.|+.++.+.+..++..++++|.++
8764 T Consensus 51 ~~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~~~------~~~~l~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~nl 124 (369)
8765 T 6HB1_A 51 RPIKDIIKMIMDPEHGTRVIIQQGVTILVNLSEDKL------VRNIILSDDKKFLKFLVWKIVDLTNPNADIMCILLSNL 124 (369)
8766 T ss_dssp HHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHTTSHH------HHHCCCCCSTHHHHHHHHHHHCTTCTTHHHHHHHHHHH
8767 T ss_pred hHHHHHHHHHhCcccCcHHHHHHHHHHHHHHhCCHH------HHHHHhhcChHHHHHHHHHHHcCCCccHHHHHHHHHHH
8768 Confidence 588999999952 1356788899999999986532 244445 689999999999887778889999999999
8769
8770
8771 Q NP_000290.2 623 SRHPLLH-RV-------------------------MGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA 676 (747)
8772 Q Consensus 623 a~~~e~~-~l-------------------------l~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~ 676 (747)
8773 +...... .+ ...++++.|+.++.........++.++..++++|.+|+.. +..+
8774 T Consensus 125 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~Lv~~l~~~~~~~~~~~~~~~~a~~~l~~l~~~-~~~~ 203 (369)
8775 T 6HB1_A 125 AKDDGILAVLNIKRNSSGEEVDDGLKLAALNKEVFKSLRAMDCLMDCFVKGYDKKLTKYASFNYLAFFFADISRF-KLGR 203 (369)
8776 T ss_dssp TTSGGGGGGGGCBCSCSSSEEETTEEECCCCTTTCCCSBHHHHHHHHHHHCGGGSSCSSCCCTTHHHHHHHHTTS-HHHH
8777 T ss_pred ccChhHHHHHhhcCCCCCCchhhhHHHHHHcHHHHHHhhHHHHHHHHHhhcCcccCCchhchHHHHHHHHHHcCC-HHHH
8778 Confidence 9864332 22 1246778888887652000000456788899999999875 5666
8779
8780
8781 Q NP_000290.2 677 KQYFSSS------MLNNIINLCR-SSASPKAAEAARLLLSDMWSSKELQGVLRQ 723 (747)
8782 Q Consensus 677 ~~Lve~g------iL~~Ll~LL~-s~~d~eVr~aAL~aLsnL~~~~~~~~~~~~ 723 (747)
8783 ..+.+.+ .+..++.++. +. +..++..++.+|.+++.+.+....+..
8784 T Consensus 204 ~~l~~~g~~~~~~~l~~ll~~l~~~~-~~~~~~~a~~~L~nl~~~~~~~~~i~~ 256 (369)
8785 T 6HB1_A 204 MYFIEEQEYDGVVPISKLLVFTEKYD-AKVRREGVASTIKNSLFDSETHERLLK 256 (369)
8786 T ss_dssp HHHHSCCTTTCCCGGGGTGGGGGCTT-CHHHHHHHHHHHHHHTCCGGGHHHHHH
8787 T ss_pred HHHhhcccccCcccHHHHHHHhcccC-CHHHHHHHHHHHHHHhcCHHHHHHHhc
8788 Confidence 6677766 4666666665 34 678899999999999988775544443
8789
8790
8791 No 145
8792 >6HB2_D Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; HET: MSE; 2.7A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
8793 Probab=96.86 E-value=1.8e-06 Score=89.00 Aligned_cols=169 Identities=9% Similarity=0.050 Sum_probs=120.8 Template_Neff=10.100
8794
8795 Q NP_000290.2 547 DAIRTYLNLMGK--SKKDATLEACAGALQNLTASKGLMSSGMSQLIGL--KEKGLPQIARLLQSGNSDVVRSGASLLSNM 622 (747)
8796 Q Consensus 547 G~I~~LL~LL~s--s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~lli--e~giI~~Ll~LL~s~d~eVr~~AL~aLsnL 622 (747)
8797 ++++.|+.++.. +.++.++..++++|.+++.... ....+. +.++++.|+.++.+.+..++..++++|.++
8798 T Consensus 51 ~~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~~~------~~~~l~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~nl 124 (369)
8799 T 6HB2_D 51 RPIKDIIKMIMDPEHGTRVIIQQGVTILVNLSEDKL------VRNIILSDDKKFLKFLVWKIVDLTNPNADIMCILLSNL 124 (369)
8800 T ss_dssp HHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHTTSHH------HHHCCCCCCTHHHHHHHHHHSCTTCTTHHHHHHHHHHH
8801 T ss_pred hHHHHHHHHHhCcccCcHHHHHHHHHHHHHHhCCHH------HHHHHhhcChHHHHHHHHHHHcCCCccHHHHHHHHHHH
8802 Confidence 588999999952 1356788899999999986532 244445 689999999999887778889999999999
8803
8804
8805 Q NP_000290.2 623 SRHPLLH-RV-------------------------MGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA 676 (747)
8806 Q Consensus 623 a~~~e~~-~l-------------------------l~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~ 676 (747)
8807 +...... .+ ...++++.|+.++.........++.++..++++|.+|+.. +..+
8808 T Consensus 125 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~Lv~~l~~~~~~~~~~~~~~~~a~~~l~~l~~~-~~~~ 203 (369)
8809 T 6HB2_D 125 AKDDGILAVLNIKRNSSGEEVDDGLKLAALNKEVFKSLRAMDCLMDCFVKGYDKKLTKYASFNYLAFFFADISRF-KLGR 203 (369)
8810 T ss_dssp TTSGGGGGGGGCBCSCSSSEEETTEEECCCCTTTCCCSBHHHHHHHHHHHHGGGSSCSSCCCTTHHHHHHHHTTS-HHHH
8811 T ss_pred ccChhHHHHHhhcCCCCCCchhhhHHHHHHcHHHHHHhhHHHHHHHHHhhcCcccCCchhchHHHHHHHHHHcCC-HHHH
8812 Confidence 9864332 22 1246778888887652000000456788899999999875 5666
8813
8814
8815 Q NP_000290.2 677 KQYFSSS------MLNNIINLCR-SSASPKAAEAARLLLSDMWSSKELQGVLRQ 723 (747)
8816 Q Consensus 677 ~~Lve~g------iL~~Ll~LL~-s~~d~eVr~aAL~aLsnL~~~~~~~~~~~~ 723 (747)
8817 ..+.+.+ .+..++.++. +. +..++..++.+|.+++.+.+....+..
8818 T Consensus 204 ~~l~~~g~~~~~~~l~~ll~~l~~~~-~~~~~~~a~~~L~nl~~~~~~~~~i~~ 256 (369)
8819 T 6HB2_D 204 MYFIEEQEYDGVVPISKLLVFTEKYD-AKVRREGVASTIKNSLFDSETHERLLK 256 (369)
8820 T ss_dssp HHHHSCCTTTCSCTHHHHGGGGGCTT-CHHHHHHHHHHHHHHTCSGGGHHHHHH
8821 T ss_pred HHHhhcccccCcccHHHHHHHhcccC-CHHHHHHHHHHHHHHhcCHHHHHHHhc
8822 Confidence 6677766 4666666665 34 678899999999999988775544443
8823
8824
8825 No 146
8826 >5MFD_C YIIIM''6AII, Capsid decoration protein,pD_(KR)5; Designed armadillo repeat protein, peptide; HET: CA; 2.3A {synthetic construct}
8827 Probab=96.84 E-value=1.8e-06 Score=81.45 Aligned_cols=114 Identities=25% Similarity=0.284 Sum_probs=77.1 Template_Neff=13.300
8828
8829 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8830 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8831 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..+..........+
8832 T Consensus 47 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 126 (328)
8833 T 5MFD_C 47 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 126 (328)
8834 T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
8835 T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHhcCcHHHHHHHhhcCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
8836 Confidence 45566666777777888899999988876543333333344567777777777777888889999988876533333333
8837
8838
8839 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
8840 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
8841 ...++++.+...+. ..++.++..++.++..+...
8842 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 160 (328)
8843 T 5MFD_C 127 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASG 160 (328)
8844 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTS
8845 T ss_pred HHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcC
8846 Confidence 33456667777775 45667777788888777653
8847
8848
8849 No 147
8850 >6SA7_B DARPin-Armadillo fusion C8long83; protein fusion, DARPin, Armadillo, shared; 3.3A {synthetic construct}
8851 Probab=96.84 E-value=1.8e-06 Score=88.77 Aligned_cols=115 Identities=27% Similarity=0.318 Sum_probs=78.7 Template_Neff=12.500
8852
8853 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8854 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8855 +++.+...+.+.++.++..++.+|..++.........+...++++.+..++.+.++.++..++.++..++.........+
8856 T Consensus 384 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 463 (510)
8857 T 6SA7_B 384 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAV 463 (510)
8858 T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
8859 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCchHHHHH
8860 Confidence 34445555555667778888888888865544433344445677888888887788889999999999985544433333
8861
8862
8863 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD 361 (747)
8864 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~ 361 (747)
8865 ...++++.+..++. +.++.++..++.++..+....
8866 T Consensus 464 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~ 498 (510)
8867 T 6SA7_B 464 KEAGALEKLEQLQS-HENEKIQKEAQEALEKLGSGG 498 (510)
8868 T ss_dssp HHTTHHHHHHHGGG-CSSHHHHHHHHHHHHHHTC--
8869 T ss_pred HHCCHHHHHHHHhh-ccchHHHHHHHHHHHHHhhcc
8870 Confidence 34456777777776 556788888999888887643
8871
8872
8873 No 148
8874 >6S9O_F designed Armadillo repeat protein with; peptide binder, repeat protein, designed; HET: CA, EDO; 3.17A {synthetic construct}
8875 Probab=96.77 E-value=2.5e-06 Score=81.50 Aligned_cols=115 Identities=28% Similarity=0.317 Sum_probs=77.6 Template_Neff=13.100
8876
8877 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
8878 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
8879 .+++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++.........
8880 T Consensus 46 ~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 125 (344)
8881 T 6S9O_F 46 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALRNIASGGNEQIQA 125 (344)
8882 T ss_dssp TCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHSCSCHHHHHHHHHHHHHHTTSCHHHHHH
8883 T ss_pred ChHHHHHHHcCCCCHHHHHHHHHHHHHHhcCChhHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCchHHHH
8884 Confidence 34556666677777788889999999887654333333334456777777777777788888999998887643333333
8885
8886
8887 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
8888 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
8889 +...++++.+...+. ..++.++..++.++..++..
8890 T Consensus 126 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 160 (344)
8891 T 6S9O_F 126 VIDAGALPALVQLLS-SPNEQILSSALGALSNIASG 160 (344)
8892 T ss_dssp HHHTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTS
8893 T ss_pred HHhCCHHHHHHHHhc-CCcHHHHHHHHHHHHHHHcC
8894 Confidence 333456677777775 45667777888888877653
8895
8896
8897 No 149
8898 >1XM9_A plakophilin 1 Plakophilin-1; armadillo repeat, CELL ADHESION; 2.8A {Homo sapiens} SCOP: a.118.1.24
8899 Probab=96.77 E-value=2.5e-06 Score=86.12 Aligned_cols=167 Identities=15% Similarity=0.182 Sum_probs=108.5 Template_Neff=12.600
8900
8901 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL----------------QS 606 (747)
8902 Q Consensus 543 lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL----------------~s 606 (747)
8903 +++.++++.|+.++....++.++..++.+|.+++.... ....+. .++++.|+.++ ..
8904 T Consensus 82 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~------~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 154 (457)
8905 T 1XM9_A 82 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE------LKEELI-ADALPVLADRVIIPFSGWCDGNSNMSREV 154 (457)
8906 T ss_dssp HHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSS------THHHHH-HHHHHHCCCCCCHHHHTCC---------C
8907 T ss_pred HHhcChHHHHHHHhhhCCCHHHHHHHHHHHHHHhCCHH------HHHHHH-cchHHHHHHHhccccCCCCCCCCCccccc
8908 Confidence 45677888888888633566788889999999987422 123333 57888888888 56
8909
8910
8911 Q NP_000290.2 607 GNSDVVRSGASLLSNMSRHPLL-HRVMG-NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP----------- 673 (747)
8912 Q Consensus 607 ~d~eVr~~AL~aLsnLa~~~e~-~~ll~-~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~----------- 673 (747)
8913 .++.++..++++|.+++..... ..+.. .++++.++.++.........+..++..++.+|.+++...+
8914 T Consensus 155 ~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 234 (457)
8915 T 1XM9_A 155 VDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLE 234 (457)
8916 T ss_dssp CCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHH
8917 T ss_pred CCHHHHHHHHHHHHHHccChHHHHHHHhcccHHHHHHHHHHHhhhcCcCCHHHHHHHHHHHHHHhcccccCCCcchhhhh
8918 Confidence 6788899999999999976433 22332 3567777777764100000256788889999999886311
8919
8920
8921 Q NP_000290.2 674 ---------------------------------------QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
8922 Q Consensus 674 ---------------------------------------e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
8923 .....+...++++.++.++....+..++..++.+|.+++..
8924 T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~ 314 (457)
8925 T 1XM9_A 235 YNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTAS 314 (457)
8926 T ss_dssp HTC----------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTC
8927 T ss_pred hcccccccccccccccCcccchhccccccCCCCcccCCCchhHHhhchhHHHHHHHHhccCCCHHHHHHHHHHHHHHHhc
8928 Confidence 11122334456667777766532556677788888887765
8929
8930
8931 Q NP_000290.2 715 KE 716 (747)
8932 Q Consensus 715 ~~ 716 (747)
8933 .+
8934 T Consensus 315 ~~ 316 (457)
8935 T 1XM9_A 315 KG 316 (457)
8936 T ss_dssp SS
8937 T ss_pred cc
8938 Confidence 54
8939
8940
8941 No 150
8942 >4HXT_A De Novo Protein OR329; Structural Genomics, PSI-Biology, Protein Structure; 1.95A {artificial gene}
8943 Probab=96.77 E-value=2.5e-06 Score=77.32 Aligned_cols=114 Identities=27% Similarity=0.311 Sum_probs=76.9 Template_Neff=13.200
8944
8945 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8946 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8947 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+.+.++.++..++.++..++...+.....+
8948 T Consensus 129 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 208 (252)
8949 T 4HXT_A 129 GVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAI 208 (252)
8950 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHH
8951 T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
8952 Confidence 34555555666667788888888888876543333333344567777777777777888889999988886544333333
8953
8954
8955 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
8956 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
8957 ...++++.+...+. ..++.++..++.++.+++..
8958 T Consensus 209 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~ 242 (252)
8959 T 4HXT_A 209 VDAGGVEVLQKLLT-STDSEVQKEAQRALENIKSG 242 (252)
8960 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHHHT
8961 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcC
8962 Confidence 33356777777776 45677888888888888764
8963
8964
8965 No 151
8966 >6SA6_A DARPin-Armadillo fusion A5; protein fusion, DARPin, Armadillo, shared; HET: EDO; 1.6A {synthetic construct}
8967 Probab=96.73 E-value=3e-06 Score=84.23 Aligned_cols=132 Identities=23% Similarity=0.240 Sum_probs=87.4 Template_Neff=12.400
8968
8969 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRR 327 (747)
8970 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~ 327 (747)
8971 ..++..+.+.+..++..++.++.+++.........+...++++.+..++.+.++.++..++.++.+++.........+..
8972 T Consensus 160 ~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 239 (397)
8973 T 6SA6_A 160 AALVLKLNANDDQIIQEALWKLGNHASGGNLRIQWVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVID 239 (397)
8974 T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHTTTHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH
8975 T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHhhCCchHHHHHHHCCcHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHH
8976 Confidence 34445555567788889999999988755444444445567788888888777788889999999988654443334444
8977
8978
8979 Q NP_000290.2 328 QNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
8980 Q Consensus 328 ~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
8981 .++++.+..++. ..++.++..++.++.+++..... ...+.. ++++.|+.+|.
8982 T Consensus 240 ~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 293 (397)
8983 T 6SA6_A 240 AGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLS 293 (397)
8984 T ss_dssp TTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT
8985 T ss_pred CCcHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCcHHHHHHHHhCChHHHHHHHhc
8986 Confidence 567777888876 55677888888888888654222 222222 45555555543
8987
8988
8989 No 152
8990 >3NMZ_A APC variant protein, Rho guanine; protein-protein complex, armadillo repeats, CELL; 3.01A {Homo sapiens}
8991 Probab=96.71 E-value=3.3e-06 Score=86.51 Aligned_cols=135 Identities=22% Similarity=0.327 Sum_probs=88.0 Template_Neff=12.000
8992
8993 Q NP_000290.2 246 TIPKAVQYLSSQ-----------DEKYQAIGAYYIQHTCFQDESAKQQVYQ-LGGICKLVDLLRSPNQNVQQAAAGALRN 313 (747)
8994 Q Consensus 246 iL~~Ll~lL~ss-----------d~eVr~sAL~aLsnLs~~~~~~~~~li~-~~IL~~Ll~lL~s~d~eVr~~AL~aLs~ 313 (747)
8995 +++.+..++... +..++..++.+|.+++.........+.. .++++.+..++...+..++..++.++.+
8996 T Consensus 190 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~L~~ 269 (458)
8997 T 3NMZ_A 190 GLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRN 269 (458)
8998 T ss_pred hHHHHHHHHhccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHH
8999 Confidence 445555555543 5678888999999988754433332333 4677888888877778889999999999
9000
9001
9002 Q NP_000290.2 314 LVFRST-TNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELI--ADALPVLADRVI 380 (747)
9003 Q Consensus 314 La~~~~-~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lv--egiLe~Lv~LL~ 380 (747)
9004 ++.... .....+...++++.+..++....+..++..++.++.+++.. ......+. .++++.|+.++.
9005 T Consensus 270 l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 340 (458)
9006 T 3NMZ_A 270 LSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLT 340 (458)
9007 T ss_pred HHCCCChhHHHHHHHCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCchhHHHHHHhcChHHHHHHHHc
9008 Confidence 886543 22333444457777777775234567888889999998873 33333333 256666666654
9009
9010
9011 No 153
9012 >6HB1_A Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; 2.33A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
9013 Probab=96.61 E-value=5.3e-06 Score=85.37 Aligned_cols=93 Identities=22% Similarity=0.297 Sum_probs=66.7 Template_Neff=10.100
9014
9015 Q NP_000290.2 287 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ--NGIREAVSLLRR--TGNAEIQKQLTGLLWNLSSTDE 362 (747)
9016 Q Consensus 287 ~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~--~IL~~Ll~lL~s--s~d~eVr~~AL~aLsnLas~~~ 362 (747)
9017 +.++.++.++...++.++..++.++.++..... ...+... +.++.|+.++.. ..++.++..++.+|.+++....
9018 T Consensus 9 ~~i~~lv~lL~~~~~~v~~~a~~~L~~l~~~~~--~~~l~~~~~~~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~~~ 86 (369)
9019 T 6HB1_A 9 SQLNELVEFLHSPQPAVRQIAIDNLVGFSAGPT--SKVFKNDSYRPIKDIIKMIMDPEHGTRVIIQQGVTILVNLSEDKL 86 (369)
9020 T ss_dssp CCHHHHHHGGGCSCHHHHHHHHHHHGGGGSSGG--GGGGGHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHTTSHH
9021 T ss_pred hhHHHHHHHhcCCCHHHHHHHHHHHhHhcCCCC--chhhhcCCchHHHHHHHHHhCcccCcHHHHHHHHHHHHHHhCCHH
9022 Confidence 456677777777777888899999988876543 2333333 478888888852 1356788899999999987655
9023
9024
9025 Q NP_000290.2 363 LKEELI--A-DALPVLADRVII 381 (747)
9026 Q Consensus 363 ~~~~Lv--e-giLe~Lv~LL~~ 381 (747)
9027 ....+. + ++++.|+.++..
9028 T Consensus 87 ~~~~l~~~~~g~i~~L~~ll~~ 108 (369)
9029 T 6HB1_A 87 VRNIILSDDKKFLKFLVWKIVD 108 (369)
9030 T ss_dssp HHHCCCCCSTHHHHHHHHHHHC
9031 T ss_pred HHHHHhhcChHHHHHHHHHHHc
9032 Confidence 556666 5 888888888874
9033
9034
9035 No 154
9036 >6HB2_D Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; HET: MSE; 2.7A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
9037 Probab=96.61 E-value=5.3e-06 Score=85.37 Aligned_cols=93 Identities=22% Similarity=0.297 Sum_probs=66.7 Template_Neff=10.100
9038
9039 Q NP_000290.2 287 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ--NGIREAVSLLRR--TGNAEIQKQLTGLLWNLSSTDE 362 (747)
9040 Q Consensus 287 ~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~--~IL~~Ll~lL~s--s~d~eVr~~AL~aLsnLas~~~ 362 (747)
9041 +.++.++.++...++.++..++.++.++..... ...+... +.++.|+.++.. ..++.++..++.+|.+++....
9042 T Consensus 9 ~~i~~lv~lL~~~~~~v~~~a~~~L~~l~~~~~--~~~l~~~~~~~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~~~ 86 (369)
9043 T 6HB2_D 9 SQLNELVEFLHSPQPAVRQIAIDNLVGFSAGPT--SKVFKNDSYRPIKDIIKMIMDPEHGTRVIIQQGVTILVNLSEDKL 86 (369)
9044 T ss_dssp HHHHHHHGGGGCSCHHHHHHHHHHHGGGGSSGG--GGGGGHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHTTSHH
9045 T ss_pred hhHHHHHHHhcCCCHHHHHHHHHHHhHhcCCCC--chhhhcCCchHHHHHHHHHhCcccCcHHHHHHHHHHHHHHhCCHH
9046 Confidence 456677777777777888899999988876543 2333333 478888888852 1356788899999999987655
9047
9048
9049 Q NP_000290.2 363 LKEELI--A-DALPVLADRVII 381 (747)
9050 Q Consensus 363 ~~~~Lv--e-giLe~Lv~LL~~ 381 (747)
9051 ....+. + ++++.|+.++..
9052 T Consensus 87 ~~~~l~~~~~g~i~~L~~ll~~ 108 (369)
9053 T 6HB2_D 87 VRNIILSDDKKFLKFLVWKIVD 108 (369)
9054 T ss_dssp HHHCCCCCCTHHHHHHHHHHSC
9055 T ss_pred HHHHHhhcChHHHHHHHHHHHc
9056 Confidence 556666 5 888888888874
9057
9058
9059 No 155
9060 >2W3C_A GENERAL VESICULAR TRANSPORT FACTOR P115; MEMBRANE VESICLE TETHERING, ARMADILLO FOLD; HET: PEG; 2.22A {HOMO SAPIENS}
9061 Probab=96.59 E-value=5.7e-06 Score=90.00 Aligned_cols=135 Identities=13% Similarity=0.124 Sum_probs=95.4 Template_Neff=10.400
9062
9063 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDE-SAKQQVY-QLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
9064 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~-~~~~~li-~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
9065 .++.++.++.+.+..++..++.+|..++...+ .....+. ..+.++.++.++.+.+..++..++.+|..++........
9066 T Consensus 71 ~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~ 150 (577)
9067 T 2W3C_A 71 NVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQK 150 (577)
9068 T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHH
9069 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHHHhchHHHHHHHHhCCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHH
9070 Confidence 45566666766778889999999999987543 2222333 246788888888877788899999999999875444444
9071
9072
9073 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGN----AEIQKQLTGLLWNLSSTDELKEEL-IA-DALPVLADRVII 381 (747)
9074 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d----~eVr~~AL~aLsnLas~~~~~~~L-ve-giLe~Lv~LL~~ 381 (747)
9075 .+...+.++.|+.++. ... ..++..++.+|.+++........+ .+ ++++.|+.+|..
9076 T Consensus 151 ~~~~~g~~~~L~~ll~-~~~~~~~~~v~~~al~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~ 213 (577)
9077 T 2W3C_A 151 IVAFENAFERLLDIIS-EEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEV 213 (577)
9078 T ss_dssp HHHHTTHHHHHHHHHH-HTTGGGSCHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGSGGGCC
9079 T ss_pred HHHcCCHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHccCHHHHHHHHhcChHHHHHHHHhc
9080 Confidence 4444678888888886 322 257788899999998765433333 34 788889888875
9081
9082
9083 No 156
9084 >4XZR_B Heh1-NLS, Kap60; karyopherins nuclear import ; 2.25A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
9085 Probab=96.58 E-value=5.2e-06 Score=81.38 Aligned_cols=114 Identities=19% Similarity=0.154 Sum_probs=76.5 Template_Neff=13.200
9086
9087 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9088 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9089 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..++..........
9090 T Consensus 172 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 251 (423)
9091 T 4XZR_B 172 ALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVV 251 (423)
9092 T ss_dssp GHHHHHHHTTCSCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
9093 T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
9094 Confidence 45556666666677788888888888876544333334444567777777777777888889999988876543332223
9095
9096
9097 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
9098 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
9099 ...++++.+...+. ..++.++..++.++..++..
9100 T Consensus 252 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 285 (423)
9101 T 4XZR_B 252 INAGVLPALRLLLS-SPKENIKKEACWTISNITAG 285 (423)
9102 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTS
9103 T ss_pred HHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHhcC
9104 Confidence 33356667777775 45667777888888877764
9105
9106
9107 No 157
9108 >3TT9_A Plakophilin-2; CELL ADHESION; HET: GOL; 1.55A {Homo sapiens}
9109 Probab=96.56 E-value=6e-06 Score=75.59 Aligned_cols=136 Identities=22% Similarity=0.238 Sum_probs=88.7 Template_Neff=12.300
9110
9111 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
9112 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
9113 +++.+..++.+.+..++..++.+|.+++.........+...+.++.++.++. ..+..++..++.++.+++... .....
9114 T Consensus 53 ~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~-~~~~~ 131 (233)
9115 T 3TT9_A 53 GILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSND-KLKNL 131 (233)
9116 T ss_dssp HHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSG-GGHHH
9117 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCcHHHHHHHcccHHHHHHHHhhCCCHHHHHHHHHHHHHHccCH-HHHHH
9118 Confidence 4556666676667788889999999988644444444555577788888887 556778888999999987643 22233
9119
9120
9121 Q NP_000290.2 325 TRRQNGIREAVSLLRRT--------------GNAEIQKQLTGLLWNLSS-TDELKEELIA-DA-LPVLADRVIIP 382 (747)
9122 Q Consensus 325 ll~~~IL~~Ll~lL~ss--------------~d~eVr~~AL~aLsnLas-~~~~~~~Lve-gi-Le~Lv~LL~~~ 382 (747)
9123 +...+++..+..++... .+..++..++.++.+++. .......+.. +. ++.|+.++...
9124 T Consensus 132 ~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (233)
9125 T 3TT9_A 132 MITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGT 206 (233)
9126 T ss_dssp HHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHH
9127 T ss_pred hhhhcHHHHHHHHHhhccCCCCCCCCcccCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcccHHHHHHHHHHcc
9128 Confidence 33334455555554311 135677888899999887 4444444444 55 78888877653
9129
9130
9131 No 158
9132 >6HB3_B Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; 3.0A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
9133 Probab=96.56 E-value=6.6e-06 Score=84.61 Aligned_cols=93 Identities=22% Similarity=0.297 Sum_probs=66.7 Template_Neff=10.100
9134
9135 Q NP_000290.2 287 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ--NGIREAVSLLRR--TGNAEIQKQLTGLLWNLSSTDE 362 (747)
9136 Q Consensus 287 ~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~--~IL~~Ll~lL~s--s~d~eVr~~AL~aLsnLas~~~ 362 (747)
9137 +.++.++.++...+..++..++.++.++..... ...+... +.++.|+.++.. ..+..++..++.+|.+++....
9138 T Consensus 9 ~~~~~lv~lL~~~~~~v~~~a~~~L~~l~~~~~--~~~l~~~~~~~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~~~ 86 (369)
9139 T 6HB3_B 9 SQLNELVEFLHSPQPAVRQIAIDNLVGFSAGPT--SKVFKNDSYRPIKDIIKMIMDPEHGTRVIIQQGVTILVNLSEDKL 86 (369)
9140 T ss_pred CcHHHHHHHccCCCHHHHHHHHHHHHHHcCChh--HHHHHHhCCCcHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCHH
9141 Confidence 456677777776677888899999988876543 2333333 478888888852 1356788899999999987655
9142
9143
9144 Q NP_000290.2 363 LKEELI--A-DALPVLADRVII 381 (747)
9145 Q Consensus 363 ~~~~Lv--e-giLe~Lv~LL~~ 381 (747)
9146 ....+. . ++++.|+.+|..
9147 T Consensus 87 ~~~~l~~~~~g~i~~L~~ll~~ 108 (369)
9148 T 6HB3_B 87 VRNIILSDDKKFLKFLVWKIVD 108 (369)
9149 T ss_pred HHHHHHhccCCcHHHHHHHhcC
9150 Confidence 556666 5 888888888874
9151
9152
9153 No 159
9154 >6SA8_A ring-like DARPin-Armadillo fusion H83_D01, LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG; protein fusion, DARPin, Armadillo, shared; 2.4A {synthetic construct}
9155 Probab=96.54 E-value=6.4e-06 Score=88.93 Aligned_cols=322 Identities=20% Similarity=0.248 Sum_probs=204.5 Template_Neff=11.900
9156
9157 Q NP_000290.2 286 LGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELK 364 (747)
9158 Q Consensus 286 ~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~ 364 (747)
9159 ...++.+...+...+..++..++.+|..++.........+...++++.+...+. ..++.++..++.++..++... ...
9160 T Consensus 177 ~~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~ 255 (671)
9161 T 6SA8_A 177 KKILKDLVKKLSSPNENELQNALWTLGNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQI 255 (671)
9162 T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTSCHHHH
9163 T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCChHHH
9164 Confidence 355667777777777778888888888887654333333444567777888886 557788999999999988743 222
9165
9166
9167 Q NP_000290.2 365 EELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQT 443 (747)
9168 Q Consensus 365 ~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (747)
9169 ..+.. ++++.|+.++.. .++++-..+..+|..-. .. ....+..
9170 T Consensus 256 ~~~~~~~~~~~l~~~l~~----------------~~~~v~~~a~~~L~~l~---------~~-----------~~~~~~~ 299 (671)
9171 T 6SA8_A 256 QAVIDAGALPALVQLLSS----------------PNEQILQEALWALSNIA---------SG-----------GNEQIQA 299 (671)
9172 T ss_dssp HHHHHTTCHHHHHHHTTC----------------SCHHHHHHHHHHHHHHT---------TS-----------CHHHHHH
9173 T ss_pred HHHHHcCHHHHHHHHhcC----------------CCHHHHHHHHHHHHHHH---------cC-----------CcHHHHH
9174 Confidence 33333 677777777753 13444444444443211 00 0001111
9175
9176
9177 Q NP_000290.2 444 MRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMN 523 (747)
9178 Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (747)
9179 . -..++++.|+..++. .+..-...+...|.++....
9180 T Consensus 300 ~-~~~~~~~~L~~~l~~------~~~~v~~~a~~~L~~l~~~~------------------------------------- 335 (671)
9181 T 6SA8_A 300 V-IDAGALPALVQLLSS------PNEQILQEALWALSNIASGG------------------------------------- 335 (671)
9182 T ss_dssp H-HHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSC-------------------------------------
9183 T ss_pred H-HHhChHHHHHHHhcC------CcHHHHHHHHHHHHHHhcCC-------------------------------------
9184 Confidence 1 113455555544431 11112222333333332110
9185
9186
9187 Q NP_000290.2 524 NNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARL 603 (747)
9188 Q Consensus 524 ~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~L 603 (747)
9189 ......+.+.++++.|+.++. ..++.++..++.+|.+++...+. ....+...++++.|+.+
9190 T Consensus 336 -------------~~~~~~~~~~~~l~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~ 396 (671)
9191 T 6SA8_A 336 -------------NEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNE-----QIQAVIDAGALPALVQL 396 (671)
9192 T ss_dssp -------------HHHHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHG
9193 T ss_pred -------------cHHHHHHHhcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCcH-----HHHHHHHcCcHHHHHHH
9194 Confidence 001112345667888888887 46778888999999999874332 23333456788899999
9195
9196
9197 Q NP_000290.2 604 LQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFS 681 (747)
9198 Q Consensus 604 L~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve 681 (747)
9199 +.+.++.++..++.+|.+++... .. ......++++.|+.++.+ .++.++..++.+|.+++...+.....+.+
9200 T Consensus 397 l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~ 470 (671)
9201 T 6SA8_A 397 LSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSS------PNEQILQEALWALSNIASGGNEQIQAVID 470 (671)
9202 T ss_dssp GGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHH
9203 T ss_pred hcCCCHHHHHHHHHHHHhhcCCCHHHHHHHHhcCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHcCChHHHHHHHh
9204 Confidence 98888899999999999998762 22 233445678888888876 36788999999999999765544455556
9205
9206
9207 Q NP_000290.2 682 SSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
9208 Q Consensus 682 ~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
9209 .++++.|+.++.+. ++.++..++.+|.+++..
9210 T Consensus 471 ~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~ 502 (671)
9211 T 6SA8_A 471 AGALPALVQLLSSP-NEQIQDEAEKTLLNIANG 502 (671)
9212 T ss_dssp TTHHHHHHHHTTCS-CHHHHHHHHHHHHHHHTS
9213 T ss_pred cCcHHHHHHHhhCC-CHHHHHHHHHHHHHHHcC
9214 Confidence 67788888888876 788899999999998854
9215
9216
9217 No 160
9218 >1EE4_A KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
9219 Probab=96.51 E-value=6.8e-06 Score=80.51 Aligned_cols=114 Identities=22% Similarity=0.183 Sum_probs=77.4 Template_Neff=13.200
9220
9221 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9222 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9223 +++.+...+.+.++.++..++.++..+..............++++.+...+.+.++.++..++.++..++...+.....+
9224 T Consensus 214 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 293 (423)
9225 T 1EE4_A 214 IPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAV 293 (423)
9226 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
9227 T ss_pred HHHHHHHHhcCCCcchhHHHHHHHHHHHhCChHHHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHH
9228 Confidence 44556666666677888889999988876543333333334667777777777777888899999988876544333333
9229
9230
9231 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
9232 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
9233 ...++++.+...+. ..++.++..++.++..++..
9234 T Consensus 294 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 327 (423)
9235 T 1EE4_A 294 IDANLIPPLVKLLE-VAEDKTKKEACWAISNASSG 327 (423)
9236 T ss_dssp HHTTCHHHHHHHHH-HSCHHHHHHHHHHHHHHHGG
9237 T ss_pred HHCCcHHHHHHHHh-cCCHHHHHHHHHHHHHHHcC
9238 Confidence 34456677777775 55667788888888887764
9239
9240
9241 No 161
9242 >1EE4_B KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
9243 Probab=96.51 E-value=6.8e-06 Score=80.51 Aligned_cols=114 Identities=22% Similarity=0.183 Sum_probs=77.4 Template_Neff=13.200
9244
9245 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9246 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9247 +++.+...+.+.++.++..++.++..+..............++++.+...+.+.++.++..++.++..++...+.....+
9248 T Consensus 214 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 293 (423)
9249 T 1EE4_B 214 IPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAV 293 (423)
9250 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHH
9251 T ss_pred HHHHHHHHhcCCCcchhHHHHHHHHHHHhCChHHHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHH
9252 Confidence 44556666666677888889999988876543333333334667777777777777888899999988876544333333
9253
9254
9255 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
9256 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
9257 ...++++.+...+. ..++.++..++.++..++..
9258 T Consensus 294 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 327 (423)
9259 T 1EE4_B 294 IDANLIPPLVKLLE-VAEDKTKKEACWAISNASSG 327 (423)
9260 T ss_dssp HHTTCHHHHHHHHH-HSCHHHHHHHHHHHHHHHGG
9261 T ss_pred HHCCcHHHHHHHHh-cCCHHHHHHHHHHHHHHHcC
9262 Confidence 34456677777775 55667788888888887764
9263
9264
9265 No 162
9266 >5KC2_B Phosphatidylinositol 3-kinase VPS34 (E.C.2.7.1.137), Serine/threonine-protein; autophagy, phosphatidylinositol 3-kinase (PtdIns3K), endocytosis; 28.0A {Saccharomyces cerevisiae}
9267 Probab=96.45 E-value=9.9e-06 Score=98.55 Aligned_cols=150 Identities=9% Similarity=0.041 Sum_probs=112.4 Template_Neff=9.500
9268
9269 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
9270 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
9271 .++++.|+.+|. +.++.++..|+.+|..++.... ...+.+.. ++.|+.+|.+.++.++..++.+|++|+..
9272 T Consensus 618 ~~~l~~L~~~l~-d~~~~vR~~a~~al~~l~~~~~-------~~~~~~~~-lp~L~~lL~d~~~~vr~~al~aL~~L~~~ 688 (1454)
9273 T 5KC2_B 618 DIILSHLITYLN-DKDPALRVSLIQTISGISILLG-------TVTLEQYI-LPLLIQTITDSEELVVISVLQSLKSLFKT 688 (1454)
9274 T ss_pred hhhHHHHHHHcc-CCCHHHHHHHHHHHHHHHHhhH-------HHHHHHcC-HHHHHHHhcCCCHHHHHHHHHHHHHHhhC
9275 Confidence 346788889998 5888999999999999986431 22223333 89999999988889999999999999876
9276
9277
9278 Q NP_000290.2 626 P-LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
9279 Q Consensus 626 ~-e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
9280 . .....+.. +++.+..++.+ .++.++..++.+|..|+..... .... ..+++.|+.+|.+. +..+++.|
9281 T Consensus 689 ~~~~~~~~~~-~l~~l~~~l~~------~~~~vr~~a~~~L~~l~~~~~~--~~~~-~~~~~~L~~~L~d~-~~~vr~~a 757 (1454)
9282 T 5KC2_B 689 GLIRKKYYID-ISKTTSPLLLH------PNNWIRQFTLMIIIEIINKLSK--AEVY-CILYPIIRPFFEFD-VEFNFKSM 757 (1454)
9283 T ss_pred CHHHHHHHHH-HHHHHHHHHCC------CCHHHHHHHHHHHHHHhcCCCC--HHHH-cChHHHHHHHhcCC-CHHHHHHH
9284 Confidence 3 22222222 66777777766 3788999999999999875321 1122 45788899999877 88999999
9285
9286
9287 Q NP_000290.2 705 RLLLSDMWSSK 715 (747)
9288 Q Consensus 705 L~aLsnL~~~~ 715 (747)
9289 +.+|..++..+
9290 T Consensus 758 ~~~L~~~~~~~ 768 (1454)
9291 T 5KC2_B 758 ISCCKQPVSRS 768 (1454)
9292 T ss_pred HHHHHHHhhcc
9293 Confidence 99999988765
9294
9295
9296 No 163
9297 >4B18_A IMPORTIN SUBUNIT ALPHA-1, TELOMERASE REVERSE; TRANSPORT PROTEIN - PEPTIDE COMPLEX; 2.52A {HOMO SAPIENS}
9298 Probab=96.44 E-value=8.9e-06 Score=80.74 Aligned_cols=366 Identities=18% Similarity=0.167 Sum_probs=217.7 Template_Neff=13.000
9299
9300 Q NP_000290.2 245 LTIPKAVQYLSS-QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
9301 Q Consensus 245 ~iL~~Ll~lL~s-sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
9302 .+++.+...+.. .++.++..++.++..++.........+...++++.+...+.+.+..++..++.++..++........
9303 T Consensus 61 ~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~ 140 (447)
9304 T 4B18_A 61 GVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRD 140 (447)
9305 T ss_dssp THHHHHHHHTTCTTCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
9306 T ss_pred cHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCcHHHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHHccChhHHH
9307 Confidence 345556666655 5677888889999888765433333333456777888888777788889999999988765443333
9308
9309
9310 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVIIPFSGWCDGNSNMSREVVDPE 401 (747)
9311 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~ 401 (747)
9312 .+...++++.+...+....++.++..++.++..++........... ++++.+..++.. .+++
9313 T Consensus 141 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~ 204 (447)
9314 T 4B18_A 141 YVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFV----------------SDTD 204 (447)
9315 T ss_dssp HHHHTTCHHHHHHGGGCTTCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTS----------------CCHH
9316 T ss_pred HHHHCCcHHHHHHHhhcCCChhHHHHHHHHHHHHhcCCCCCCcccccccHHHHHHHHhhC----------------CCHH
9317 Confidence 3334456777777775333457888888999888765432222211 455556655532 1334
9318
9319
9320 Q NP_000290.2 402 VFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHN 481 (747)
9321 Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (747)
9322 +...+..++..-... -+ ...+.+. -.+++..|...+.. .+..-.+.+...|.+
9323 T Consensus 205 ~~~~a~~~l~~l~~~------~~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~ 257 (447)
9324 T 4B18_A 205 VLADACWALSYLSDG------PN--------------DKIQAVI-DAGVCRRLVELLMH------NDYKVVSPALRAVGN 257 (447)
9325 T ss_dssp HHHHHHHHHHHHTSS------SH--------------HHHHHHH-HTTCHHHHHHHTTC------SCHHHHHHHHHHHHH
9326 T ss_pred HHHHHHHHHHHHhcC------CH--------------HHHHHHH-HCCHHHHHHHHHcC------CCHHHHHHHHHHHHH
9327 Confidence 444444333221100 00 0000000 12333333333321 111112222222322
9328
9329
9330 Q NP_000290.2 482 LSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKK 561 (747)
9331 Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d 561 (747)
9332 +.... ......+.+.++++.|+.++. +.+
9333 T Consensus 258 l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~ 286 (447)
9334 T 4B18_A 258 IVTGD--------------------------------------------------DIQTQVILNCSALQSLLHLLS-SPK 286 (447)
9335 T ss_dssp HTTSC--------------------------------------------------HHHHHHHHHTTHHHHHHHHTT-CSS
9336 T ss_pred HhcCC--------------------------------------------------hHHHHHHhhcchHHHHHHHhc-CCC
9337 Confidence 22110 000112234567888888887 467
9338
9339
9340 Q NP_000290.2 562 DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGNQVFP 638 (747)
9341 Q Consensus 562 ~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~giI~ 638 (747)
9342 +.++..++.+|.+++..... ....+...++++.+..++.+.++.++..++.+|.+++.. ... ..+...++++
9343 T Consensus 287 ~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~ 361 (447)
9344 T 4B18_A 287 ESIKKEACWTISNITAGNRA-----QIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIK 361 (447)
9345 T ss_dssp HHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHH
9346 T ss_pred HHHHHHHHHHHHHHhcCCHH-----HHHHHHhCChHHHHHHHHhcCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCcHH
9347 Confidence 78888999999999875332 223334567888899998888888999999999999875 222 2334446778
9348
9349
9350 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK-----------QYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
9351 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~-----------~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
9352 .+..++.+ .++.++..++.+|.+++...+.... .+.+.++++.+..++.+. ++.++..++.+
9353 T Consensus 362 ~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~~v~~~a~~~ 434 (447)
9354 T 4B18_A 362 PLCDLLTV------MDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSHE-NQEIYQKAFDL 434 (447)
9355 T ss_dssp HHHHGGGS------SCHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCHHHHHHHHTTHHHHHHHGGGSS-CHHHHHHHHHH
9356 T ss_pred HHHHHhhC------CCHHHHHHHHHHHHHHHHHhHHHHhhCCCCCCHHHHHHHHhccHHHHHHHHhCC-CHHHHHHHHHH
9357 Confidence 88888776 3678889999999999875332221 233445677777777666 77889999999
9358
9359
9360 Q NP_000290.2 708 LSDMWSSKE 716 (747)
9361 Q Consensus 708 LsnL~~~~~ 716 (747)
9362 +.++....+
9363 T Consensus 435 l~~l~~~~~ 443 (447)
9364 T 4B18_A 435 IEHYFGTED 443 (447)
9365 T ss_dssp HHHHCC---
9366 T ss_pred HHHHhcCcc
9367 Confidence 988876543
9368
9369
9370 No 164
9371 >1JDH_A BETA-CATENIN, hTcf-4; BETA-CATENIN, TCF4, PROTEIN-PROTEIN COMPLEX, TRANSCRIPTION; 1.9A {Homo sapiens} SCOP: a.118.1.1
9372 Probab=96.44 E-value=9e-06 Score=82.47 Aligned_cols=363 Identities=19% Similarity=0.190 Sum_probs=216.7 Template_Neff=13.100
9373
9374 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
9375 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
9376 .+++.+...+.+.++.++..++.++..+....+.....+...++++.+...+... +..++..++.++..+..... ...
9377 T Consensus 143 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~-~~~ 221 (529)
9378 T 1JDH_A 143 GGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS-NKP 221 (529)
9379 T ss_dssp THHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTT-HHH
9380 T ss_pred ChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCChhHHHHHHHccCCcHHHHHHHHHHHHHHhcCCc-cHH
9381 Confidence 3455666667667788888999999988754444333444455777777777654 56778888888888875432 222
9382
9383
9384 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
9385 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
9386 .+...++++.+...+. ..++.++..++.++..++....... ...++++.+..++.. -++++.
9387 T Consensus 222 ~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~-~~~~~~~~l~~~l~~----------------~~~~~~ 283 (529)
9388 T 1JDH_A 222 AIVEAGGMQALGLHLT-DPSQRLVQNCLWTLRNLSDAATKQE-GMEGLLGTLVQLLGS----------------DDINVV 283 (529)
9389 T ss_dssp HHHHTTHHHHHHTTTT-SSCHHHHHHHHHHHHHHHTTCTTCS-CCHHHHHHHHHHTTC----------------SCHHHH
9390 T ss_pred HHHHCCHHHHHHHHcc-CCCHHHHHHHHHHHHHHcchhhhHH-HHchHHHHHHHHhCC----------------CCHHHH
9391 Confidence 3333456777777776 4566788888888888876432211 112455556655541 123333
9392
9393
9394 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
9395 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
9396 ..+..++..-... .+. .+..+ .-.+.++.++..+.. ..-+..-.+.+...|.++.
9397 T Consensus 284 ~~a~~~l~~l~~~------~~~--------------~~~~~-~~~~~~~~l~~~l~~----~~~~~~~~~~a~~~l~~l~ 338 (529)
9398 T 1JDH_A 284 TCAAGILSNLTCN------NYK--------------NKMMV-CQVGGIEALVRTVLR----AGDREDITEPAICALRHLT 338 (529)
9399 T ss_dssp HHHHHHHHHHTTT------CHH--------------HHHHH-HHTTHHHHHHHHHHH----HTTCHHHHHHHHHHHHHHT
9400 T ss_pred HHHHHHHHHHhcC------CHH--------------HHHHH-HHcCHHHHHHHHHHh----cCCChHhHHHHHHHHHHHh
9401 Confidence 3333333221100 000 00000 012233333332211 0111222333444444443
9402
9403
9404 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
9405 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
9406 ....... .....+...++++.++.++....++.
9407 T Consensus 339 ~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~l~~~l~~~~~~~ 371 (529)
9408 T 1JDH_A 339 SRHQEAE-----------------------------------------------MAQNAVRLHYGLPVVVKLLHPPSHWP 371 (529)
9409 T ss_dssp SSSTTHH-----------------------------------------------HHHHHHHHTTCHHHHHHTTSTTCCHH
9410 T ss_pred cCcccHH-----------------------------------------------HHHHHHHhcccHHHHHHHHCCCCCHH
9411 Confidence 2211000 00111234566778888887323667
9412
9413
9414 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN----------------------SDVVRSGASLLSN 621 (747)
9415 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d----------------------~eVr~~AL~aLsn 621 (747)
9416 ++..++.+|.+++.... ....+...++++.|..++.+.+ +.++..++.+|.+
9417 T Consensus 372 ~~~~a~~~l~~l~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 445 (529)
9418 T 1JDH_A 372 LIKATVGLIRNLALCPA------NHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHI 445 (529)
9419 T ss_dssp HHHHHHHHHHHHTTSGG------GHHHHHHTTHHHHHHHHHHHHHHHHC-----------CBTTBCHHHHHHHHHHHHHH
9420 T ss_pred HHHHHHHHHHHHhcChh------hhHHHHhcCHHHHHHHHHHhcChhHHHHHhccCcchhHhccCCHHHHHHHHHHHHHH
9421 Confidence 88889999999887532 1333345678888888887654 6788889999999
9422
9423
9424 Q NP_000290.2 622 MSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
9425 Q Consensus 622 La~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
9426 ++..... ..+...++++.+..++.+ .++.++..++.+|.+++.. +.....+...++++.|..++.+. ++.+
9427 T Consensus 446 l~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~v 517 (529)
9428 T 1JDH_A 446 LARDVHNRIVIRGLNTIPLFVQLLYS------PIENIQRVAAGVLCELAQD-KEAAEAIEAEGATAPLTELLHSR-NEGV 517 (529)
9429 T ss_dssp HTTSHHHHHHHHHTTCHHHHHHGGGC------SCHHHHHHHHHHHHHHTTS-HHHHHHHHHTTCHHHHHHGGGCS-SHHH
9430 T ss_pred HhcCccchHHHHhcCcHHHHHHHhcC------CCHHHHHHHHHHHHHHhcC-HHHHHHHHHcCcHHHHHHHHhcC-CHHH
9431 Confidence 9876433 233445677888888876 3678899999999999875 44455555667888899988876 7889
9432
9433
9434 Q NP_000290.2 701 AEAARLLLSDMW 712 (747)
9435 Q Consensus 701 r~aAL~aLsnL~ 712 (747)
9436 +..++.+|.+++
9437 T Consensus 518 ~~~a~~~L~~l~ 529 (529)
9438 T 1JDH_A 518 ATYAAAVLFRMS 529 (529)
9439 T ss_dssp HHHHHHHHHHHC
9440 T ss_pred HHHHHHHHHhcC
9441 Confidence 999999888763
9442
9443
9444 No 165
9445 >5MFI_B YIII(Dq.V2)4CqI, (KR)4; Designed armadillo repeat protein, peptide; 1.45A {synthetic construct}
9446 Probab=96.43 E-value=9.2e-06 Score=73.31 Aligned_cols=135 Identities=19% Similarity=0.216 Sum_probs=90.0 Template_Neff=13.000
9447
9448 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
9449 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
9450 .+++.+...+.+.+..++..++.++.++....+.....+...++++.+...+.+.+..++..++.++..++.........
9451 T Consensus 88 ~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 167 (243)
9452 T 5MFI_B 88 GALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQK 167 (243)
9453 T ss_dssp TCHHHHHHHTSSSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHTTTSSCHHHHHHHHHHHHHHHTSCHHHHHH
9454 T ss_pred CcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHH
9455 Confidence 34555666666667778888999999887644443334444567777888887777788888999998888644433333
9456
9457
9458 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
9459 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
9460 ....++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
9461 T Consensus 168 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 224 (243)
9462 T 5MFI_B 168 LIEAGALSPLVKLLD-DASEEVIQEAVWAIANIASGNNEQIQKLEEAGAEPALEKLQS 224 (243)
9463 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGG
9464 T ss_pred HHHCCcHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhc
9465 Confidence 334456777777776 5567888889999999886332 2222333 56666666654
9466
9467
9468 No 166
9469 >5MFJ_B YIII(Dq.V2)4CqI, (KR)5; Designed armadillo repeat protein, peptide; 1.53A {synthetic construct}
9470 Probab=96.43 E-value=9.2e-06 Score=73.31 Aligned_cols=135 Identities=19% Similarity=0.216 Sum_probs=90.0 Template_Neff=13.000
9471
9472 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
9473 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
9474 .+++.+...+.+.+..++..++.++.++....+.....+...++++.+...+.+.+..++..++.++..++.........
9475 T Consensus 88 ~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 167 (243)
9476 T 5MFJ_B 88 GALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQK 167 (243)
9477 T ss_dssp TCHHHHHHHHHHSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHTTTSSCHHHHHHHHHHHHHHHTSCHHHHHH
9478 T ss_pred CcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHH
9479 Confidence 34555666666667778888999999887644443334444567777888887777788888999998888644433333
9480
9481
9482 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
9483 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
9484 ....++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
9485 T Consensus 168 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 224 (243)
9486 T 5MFJ_B 168 LIEAGALSPLVKLLD-DASEEVIQEAVWAIANIASGNNEQIQKLEEAGAEPALEKLQS 224 (243)
9487 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHTSS
9488 T ss_pred HHHCCcHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhc
9489 Confidence 334456777777776 5567888889999999886332 2222333 56666666654
9490
9491
9492 No 167
9493 >4MFU_A Beta-catenin-like protein 1; ARM repeats, GENE REGULATION; 2.744A {Homo sapiens}
9494 Probab=96.43 E-value=1.1e-05 Score=87.33 Aligned_cols=182 Identities=12% Similarity=0.061 Sum_probs=127.6 Template_Neff=8.700
9495
9496 Q NP_000290.2 539 GSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLM----SSGMSQLIGLKEKGLPQIARLLQS------GN 608 (747)
9497 Q Consensus 539 ~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~----s~~~~~~llie~giI~~Ll~LL~s------~d 608 (747)
9498 ....+++.|+++.|+.+|. +++..+...++.+|.+++...... ........+.+.++++.|+.+|.. .+
9499 T Consensus 60 ~~~~lv~~g~i~~Lv~LL~-~~n~~i~~~a~~~L~~Lt~~~~~~~~~~~~~~~~~~l~~~g~l~~Lv~~L~~~~e~~~~d 138 (490)
9500 T 4MFU_A 60 LYHLLVELNAVQSLLGLLG-HDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEE 138 (490)
9501 T ss_dssp CTHHHHHTTHHHHHHHHTS-CSSHHHHHHHHHHHHHHHHGGGSSCCCHHHHHHHHHHHHTTHHHHHHHHHHHCCTTCHHH
9502 T ss_pred HHHHHHHCChHHHHHHHhC-CCCHHHHHHHHHHHHHHcCcccccCChhhHHHHHHHHHhCCHHHHHHHHHHhccccccch
9503 Confidence 3455678899999999998 466778888999999998643200 000013344577889999998875 55
9504
9505
9506 Q NP_000290.2 609 SDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLN 686 (747)
9507 Q Consensus 609 ~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~ 686 (747)
9508 ...+..++.+|.+|+.. +.. ..+...++++.|+.++.... ....++..++.+|.+|+..++..+..+.+.++++
9509 T Consensus 139 ~~~~~~al~~L~nL~~~~~~~~~~i~~~~~l~~Ll~~L~~~~----~~~~~k~~a~~~L~~L~~~~~~~~~~l~~~g~i~ 214 (490)
9510 T 4MFU_A 139 ADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKRLKAKM----PFDANKLYCSEVLAILLQDNDENRELLGELDGID 214 (490)
9511 T ss_dssp HHHHHHHHHHHHHHHHHSTTHHHHHCCCCCHHHHHHHHHCCS----CCCHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHH
9512 T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHCCHHHHHHHHHHcCC----CCHHHHHHHHHHHHHHHcCCHHHHHHHHhCchHH
9513 Confidence 67888999999999976 333 33445678888988887620 1367788999999999986566667777778899
9514
9515
9516 Q NP_000290.2 687 NIINLCRS-----SA---SPKAAEAARLLLSDMWSSKELQGVLRQQG 725 (747)
9517 Q Consensus 687 ~Ll~LL~s-----~~---d~eVr~aAL~aLsnL~~~~~~~~~~~~~~ 725 (747)
9518 .|+.++.. +. .......++.+|.+++...+.+..+.+.|
9519 T Consensus 215 ~Ll~lL~~~~~~d~~~~~~~e~~en~~~aL~~L~~~~~~~~~f~~~~ 261 (490)
9520 T 4MFU_A 215 VLLQQLSVFKRHNPSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGE 261 (490)
9521 T ss_dssp HHHHHHHTTSSSCCSSHHHHHHHHHHHHHHHHHHHSTHHHHHHHHTT
9522 T ss_pred HHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHCC
9523 Confidence 99998851 11 12344556889999887776655554443
9524
9525
9526 No 168
9527 >5AEI_B DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII; DE NOVO PROTEIN, PROTEIN-PEPTIDE COMPLEX; HET: CA, ACT; 1.83A {SYNTHETIC CONSTRUCT}
9528 Probab=96.41 E-value=1e-05 Score=74.57 Aligned_cols=134 Identities=26% Similarity=0.306 Sum_probs=85.5 Template_Neff=13.200
9529
9530 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9531 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9532 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..++..........
9533 T Consensus 89 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 168 (286)
9534 T 5AEI_B 89 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 168 (286)
9535 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
9536 T ss_pred hHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCChHHHHHH
9537 Confidence 44556666666677788888999888876533333333344567777777777777888889999988876543333333
9538
9539
9540 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
9541 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
9542 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
9543 T Consensus 169 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 224 (286)
9544 T 5AEI_B 169 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 224 (286)
9545 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
9546 T ss_pred HHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHcc
9547 Confidence 33456677777775 4566778888888888876422 2222222 45565655554
9548
9549
9550 No 169
9551 >4PLS_B Arm00010; PEPTIDE BINDING PROTEIN, designed armadillo; HET: CA; 2.35A {synthetic construct}
9552 Probab=96.39 E-value=1.1e-05 Score=74.12 Aligned_cols=111 Identities=25% Similarity=0.289 Sum_probs=73.2 Template_Neff=13.200
9553
9554 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9555 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9556 +++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++...+.....+
9557 T Consensus 170 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 249 (281)
9558 T 4PLS_B 170 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQKQAV 249 (281)
9559 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
9560 T ss_pred hHHHHHHHhcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHccCCCHHHHHHHHHHHHHHHcCChhHHHHH
9561 Confidence 45556666666677888889999988876544333333444577777787877777888899999998885544333333
9562
9563
9564 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNL 357 (747)
9565 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnL 357 (747)
9566 ...++++.+...+. ..++.++..++.++..+
9567 T Consensus 250 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l 280 (281)
9568 T 4PLS_B 250 KEAGAEPALEQLQS-SPNEKIQKEAQEALEKI 280 (281)
9569 T ss_dssp HTTTHHHHHHTTTS-CSCHHHHHHHHHHHHHC
9570 T ss_pred HHCChHHHHHHHhc-CCCHHHHHHHHHHHHhh
9571 Confidence 33356666666665 45666777777666554
9572
9573
9574 No 170
9575 >4HM9_A Beta-catenin-like protein 1; all alpha-helical, armadillo repeats, PROTEIN; 3.1001A {Homo sapiens}
9576 Probab=96.38 E-value=1.4e-05 Score=88.57 Aligned_cols=181 Identities=12% Similarity=0.075 Sum_probs=128.1 Template_Neff=8.100
9577
9578 Q NP_000290.2 539 GSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSS---G--MSQLIGLKEKGLPQIARLLQS------G 607 (747)
9579 Q Consensus 539 ~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~---~--~~~~llie~giI~~Ll~LL~s------~ 607 (747)
9580 ....+++.|+++.|+.+|. +.+..++..++.+|.+|+..... .. . .....+.+.++++.|+.+|.. .
9581 T Consensus 138 ~~~~lv~~g~i~~Lv~LL~-~~n~di~~~a~~~L~~Lt~~~~~-~~~~~~~~~l~~~l~e~g~l~~Lv~~L~~l~e~~~~ 215 (568)
9582 T 4HM9_A 138 LYHLLVELNAVQSLLGLLG-HDNTDVSIAVVDLLQELTDIDTL-HESEEGAEVLIDALVDGQVVALLVQNLERLDESVKE 215 (568)
9583 T ss_dssp GHHHHHHTTHHHHHHHGGG-CSSHHHHHHHHHHHHHHTCHHHH-TTCHHHHHHHHHHHHHTTHHHHHHHHHTTCCTTSHH
9584 T ss_pred HHHHHHHCChHHHHHHHhC-CCCHHHHHHHHHHHHHHhCCccc-cCChhhHHHHHHHHHhCCHHHHHHHHHhcccccccc
9585 Confidence 4455678899999999998 46678888999999999864320 00 0 013344567889999998876 5
9586
9587
9588 Q NP_000290.2 608 NSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSML 685 (747)
9589 Q Consensus 608 d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL 685 (747)
9590 +...+..++.+|.+|+.. +.. ..+...++++.|+.++.... .....+..|+.+|.+|+..++..+..+.+.+++
9591 T Consensus 216 d~~~~~~al~iL~nL~~~~~~~~~~i~~~g~l~~Ll~lL~~~~----~~~~~k~~AaeiL~~L~~~~~~~r~~l~~~g~I 291 (568)
9592 T 4HM9_A 216 EADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKRLKAKM----PFDANKLYCSEVLAILLQDNDENRELLGELDGI 291 (568)
9593 T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHCCCCCHHHHHHHHHSSC----CCCHHHHHHHHHHHHHHTTCHHHHHHHHHTTHH
9594 T ss_pred hHHHHHHHHHHHHHHhccCHHHHHHHHHCCHHHHHHHHHHcCC----CCHHHHHHHHHHHHHHHcCCHHHHHHHHhCchH
9595 Confidence 567888999999999975 333 23445678888998887520 145678889999999998656677777778889
9596
9597
9598 Q NP_000290.2 686 NNIINLCRS-----SA---SPKAAEAARLLLSDMWSSKELQGVLRQQG 725 (747)
9599 Q Consensus 686 ~~Ll~LL~s-----~~---d~eVr~aAL~aLsnL~~~~~~~~~~~~~~ 725 (747)
9600 +.|+.++.. .. .....+.++.+|..++...+.+..+...|
9601 T Consensus 292 ~~LL~lL~~y~~~d~~~~~e~e~~en~~~aL~~L~~~~~~r~~f~~~~ 339 (568)
9602 T 4HM9_A 292 DVLLQQLSVFKRHNPSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGE 339 (568)
9603 T ss_dssp HHHHHHHGGGTTSCCSSSHHHHHHHHHHHHHHHHTTSTHHHHHHHHTT
9604 T ss_pred HHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHCC
9605 Confidence 999998851 11 12345566889999888776655444443
9606
9607
9608 No 171
9609 >3L6X_A Catenin delta-1, E-cadherin; p120, catenin, cadherin, E-cadherin, armadillo; HET: SO4; 2.4A {Homo sapiens}
9610 Probab=96.36 E-value=1.3e-05 Score=86.31 Aligned_cols=135 Identities=19% Similarity=0.251 Sum_probs=86.7 Template_Neff=11.000
9611
9612 Q NP_000290.2 246 TIPKAVQYLSS------QDEKYQAIGAYYIQHTCFQDE-------------------------SAKQQVYQLGGICKLVD 294 (747)
9613 Q Consensus 246 iL~~Ll~lL~s------sd~eVr~sAL~aLsnLs~~~~-------------------------~~~~~li~~~IL~~Ll~ 294 (747)
9614 +++.++.++.. .+..++..++.+|.+++.... .....+...++++.+..
9615 T Consensus 236 ~v~~L~~~l~~~~~~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 315 (584)
9616 T 3L6X_A 236 LVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGTSPARGYELLFQPEVVRIYIS 315 (584)
9617 T ss_dssp HHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC--------------CCCCGGGGGGSHHHHHHHHH
9618 T ss_pred HHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHhhhhccChhHHHHHHhcCcCCCCCCCCChhhhhHhhChhHHHHHHH
9619 Confidence 34555565553 356677888888888875421 11223334567777777
9620
9621
9622 Q NP_000290.2 295 LLRSP-NQNVQQAAAGALRNLVFRS----TTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA 369 (747)
9623 Q Consensus 295 lL~s~-d~eVr~~AL~aLs~La~~~----~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve 369 (747)
9624 ++... ++.++..++.+|.+++... ......+...++++.+..++. ..+..++..++.+|.+++........+..
9625 T Consensus 316 ll~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~~~l~~L~~ll~-~~~~~v~~~a~~~L~~L~~~~~~~~~l~~ 394 (584)
9626 T 3L6X_A 316 LLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLT-NEHERVVKAASGALRNLAVDARNKELIGK 394 (584)
9627 T ss_dssp HHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGG-CSCHHHHHHHHHHHHHHHTTCSCHHHHHH
9628 T ss_pred HHHcCCCHHHHHHHHHHHHHHhCCCccCCHHHHHHHHHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHhcChHHHHHHHc
9629 Confidence 77765 7788889999999987642 222233334467778888886 56678888999999999876444333333
9630
9631
9632 Q NP_000290.2 370 DALPVLADRVII 381 (747)
9633 Q Consensus 370 giLe~Lv~LL~~ 381 (747)
9634 ++++.|+.+|..
9635 T Consensus 395 ~~l~~L~~~L~~ 406 (584)
9636 T 3L6X_A 395 HAIPNLVKNLPG 406 (584)
9637 T ss_dssp HHHHHHHHTSSS
9638 T ss_pred chHHHHHHcCCC
9639 Confidence 566666666643
9640
9641
9642 No 172
9643 >4U5L_A deltaIBB-importin-alpha1; TPX2, inhibitor, TRANSPORT PROTEIN; HET: 3D6; 2.53A {Mus musculus}
9644 Probab=96.35 E-value=1.2e-05 Score=78.71 Aligned_cols=134 Identities=17% Similarity=0.197 Sum_probs=87.3 Template_Neff=13.200
9645
9646 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9647 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9648 +++.+...+.+.++.++..++.++..++...+.....+...++++.+..++.+.++.++..++.++..++...+.....+
9649 T Consensus 223 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 302 (426)
9650 T 4U5L_A 223 VVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQV 302 (426)
9651 T ss_dssp CHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
9652 T ss_pred hHHHHHHHhcCCCccHHHHHHHHHHHHhcCCHHHHHHHhccchHHHHHHHhcCCChHHHHHHHHHHHHHhcCCHHHHHHH
9653 Confidence 45566666666777888889999998886544333344445677778888877778888899999998886544333333
9654
9655
9656 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD--ELKEELIA-DALPVLADRVI 380 (747)
9657 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~--~~~~~Lve-giLe~Lv~LL~ 380 (747)
9658 ...++++.+...+. ..++.++..++.++..++... .....+.. ++++.|..++.
9659 T Consensus 303 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 359 (426)
9660 T 4U5L_A 303 VNHGLVPFLVGVLS-KADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLS 359 (426)
9661 T ss_dssp HHTTCHHHHHHHHH-SSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGG
9662 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCcHHHHHHHhc
9663 Confidence 33456777777776 456677888888888887631 11122222 45555555544
9664
9665
9666 No 173
9667 >2JDQ_A IMPORTIN ALPHA-1 SUBUNIT, POLYMERASE BASIC; TRANSPORT, PB2 SUBUNIT, NUCLEAR PROTEIN; 2.2A {HOMO SAPIENS}
9668 Probab=96.34 E-value=1.3e-05 Score=79.63 Aligned_cols=366 Identities=18% Similarity=0.167 Sum_probs=218.3 Template_Neff=13.000
9669
9670 Q NP_000290.2 245 LTIPKAVQYLSS-QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
9671 Q Consensus 245 ~iL~~Ll~lL~s-sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
9672 .+++.+...+.. .++.++..++.++..++.........+...++++.+...+.+.+..++..++.++..++........
9673 T Consensus 64 ~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~ 143 (450)
9674 T 2JDQ_A 64 GVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRD 143 (450)
9675 T ss_dssp THHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
9676 T ss_pred chHHHHHHHHccCCCHHHHHHHHHHHHHHhCCCcHHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHH
9677 Confidence 345556666655 5677888888888888765443333333456777888888777788899999999988765443333
9678
9679
9680 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVIIPFSGWCDGNSNMSREVVDPE 401 (747)
9681 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~ 401 (747)
9682 .+...++++.+...+....++.++..++.++..++........... ++++.+..++.. .+++
9683 T Consensus 144 ~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~ 207 (450)
9684 T 2JDQ_A 144 YVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFV----------------SDTD 207 (450)
9685 T ss_dssp HHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTTC----------------CCHH
9686 T ss_pred HHHHCCCHHHHHHHHhhccchhHHHHHHHHHHHHhcCCCCCchhhhhhhHHHHHHHHhcC----------------CCHH
9687 Confidence 3334566777777776333457888888999888765432222221 455556655543 1334
9688
9689
9690 Q NP_000290.2 402 VFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHN 481 (747)
9691 Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (747)
9692 +...+..+|..-... .+ ...+.. -..+++..|...+++ -+..-.+.++..|.+
9693 T Consensus 208 ~~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~ 260 (450)
9694 T 2JDQ_A 208 VLADACWALSYLSDG------PN--------------DKIQAV-IDAGVCRRLVELLMH------NDYKVVSPALRAVGN 260 (450)
9695 T ss_dssp HHHHHHHHHHHHTSS------SH--------------HHHHHH-HHTTTHHHHHHHTTC------SCHHHHHHHHHHHHH
9696 T ss_pred HHHHHHHHHHHHhcC------CH--------------HHHHHH-HHCCHHHHHHHHHcC------CCHHHHHHHHHHHHH
9697 Confidence 444444333221000 00 000000 012344444433321 011111222222222
9698
9699
9700 Q NP_000290.2 482 LSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKK 561 (747)
9701 Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d 561 (747)
9702 +...- ......+.+.++++.++.++. +.+
9703 T Consensus 261 l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~ 289 (450)
9704 T 2JDQ_A 261 IVTGD--------------------------------------------------DIQTQVILNCSALQSLLHLLS-SPK 289 (450)
9705 T ss_dssp HTTSC--------------------------------------------------HHHHHHHHTTTHHHHHHHHTT-CSS
9706 T ss_pred HhhCC--------------------------------------------------hHHHHHHhhcchHHHHHHHhc-CCC
9707 Confidence 22100 000112234567888888887 467
9708
9709
9710 Q NP_000290.2 562 DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGNQVFP 638 (747)
9711 Q Consensus 562 ~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~giI~ 638 (747)
9712 +.++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++.. +.. ..+...++++
9713 T Consensus 290 ~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~ 364 (450)
9714 T 2JDQ_A 290 ESIKKEACWTISNITAGNRA-----QIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIK 364 (450)
9715 T ss_dssp HHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHH
9716 T ss_pred HHHHHHHHHHHHHHhcCCHH-----HHHHHHhCCHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHCCcHH
9717 Confidence 78888999999999875332 223334567888899998888888999999999999876 222 2334456788
9718
9719
9720 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK-----------QYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
9721 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~-----------~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
9722 .+..++.+ .++.++..++.+|.+++...+.... .+.+.+.++.+..++.+. ++.++..++.+
9723 T Consensus 365 ~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~-~~~v~~~a~~~ 437 (450)
9724 T 2JDQ_A 365 PLCDLLTV------MDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSHE-NQEIYQKAFDL 437 (450)
9725 T ss_dssp HHHHGGGS------SCHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCHHHHHHHHHHCHHHHHHHHCHH-HHHHHHHHHHH
9726 T ss_pred HHHHHhhC------CCHHHHHHHHHHHHHHHHHhHHHHhhCCCCCCHHHHHHHHhccHHHHHHHHhCC-CHHHHHHHHHH
9727 Confidence 88888876 3678888999999999875332221 233445667776666665 77889999999
9728
9729
9730 Q NP_000290.2 708 LSDMWSSKE 716 (747)
9731 Q Consensus 708 LsnL~~~~~ 716 (747)
9732 +.++....+
9733 T Consensus 438 l~~~~~~~~ 446 (450)
9734 T 2JDQ_A 438 IEHYFGTED 446 (450)
9735 T ss_dssp HHHHHCCC-
9736 T ss_pred HHHHhcCcc
9737 Confidence 988876544
9738
9739
9740 No 174
9741 >3GQ2_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.18A {Bos taurus}
9742 Probab=96.33 E-value=1.5e-05 Score=88.20 Aligned_cols=169 Identities=12% Similarity=0.125 Sum_probs=105.6 Template_Neff=10.100
9743
9744 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKK----DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS-----DV-- 611 (747)
9745 Q Consensus 543 lve~G~I~~LL~LL~ss~d----~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~-----eV-- 611 (747)
9746 +++.|+++.|+.++.. .. ..++..++.+|.+++..+.. ....+.+.++++.|..++...+. ..
9747 T Consensus 204 l~~~g~~~~L~~ll~~-~~~~~~~~v~~~al~~L~~L~~~~~~-----~~~~~~e~~~i~~L~~lL~~~~~~~~~~~~~~ 277 (651)
9748 T 3GQ2_A 204 VAFENAFERLLDIITE-EGNSDGGIVVEDCLILLQNLLKNNNS-----NQNFFKEGSYIQRMKPWFEVGDENSGWSAQKV 277 (651)
9749 T ss_dssp HHHTTHHHHHHHHHHH-TTGGGSHHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTCGGGTGGGGCCCSSCCCCCHHHH
9750 T ss_pred HHhCChHHHHHHHHHH-hCCCCccHHHHHHHHHHHHHHhCCHH-----HHHHHHhcChHHHHHHHHhcCCccCCCchHHH
9751 Confidence 4577889999998873 32 25777899999999875432 34455567889999988874331 11
9752
9753
9754 Q NP_000290.2 612 --VRSGASLLSNMSRH-------PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFS 681 (747)
9755 Q Consensus 612 --r~~AL~aLsnLa~~-------~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve 681 (747)
9756 ...++.++..++.. ... ..+...++++.|+.++.... .+..++..++.+|++++..++.....+.+
9757 T Consensus 278 ~~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~g~l~~L~~ll~~~~----~~~~v~~~a~~~La~l~~~~~~~q~~~~~ 353 (651)
9758 T 3GQ2_A 278 TNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMATG----VPADILTETINTVSEVIRGCQVNQDYFAS 353 (651)
9759 T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTTHHHHHHHHHHCSS----CCHHHHHHHHHHHHHHHTTCHHHHHHHHH
9760 T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHhcCHHHHHHHHh
9761 Confidence 22334444444421 112 23356678888888886520 14578889999999998865555444444
9762
9763
9764 Q NP_000290.2 682 S--------SMLNNIINLCRSS-ASPKAAEAARLLLSDMWSS-KELQGVL 721 (747)
9765 Q Consensus 682 ~--------giL~~Ll~LL~s~-~d~eVr~aAL~aLsnL~~~-~~~~~~~ 721 (747)
9766 . +.+..|+.++... .+..++..++.+|.+++.. .+.+..+
9767 T Consensus 354 ~~~~~~~~~~~l~~Ll~~l~~~~~~~~~r~~al~~L~~~~~~~~~~~~~l 403 (651)
9768 T 3GQ2_A 354 VNAPSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEI 403 (651)
9769 T ss_dssp CBCCSSSCCBHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHTTCHHHHHHH
9770 T ss_pred CCCCCCCCchHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
9771 Confidence 2 2355666665432 1567888999999666653 3334333
9772
9773
9774 No 175
9775 >3GRL_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.0A {Bos taurus}
9776 Probab=96.33 E-value=1.5e-05 Score=88.20 Aligned_cols=169 Identities=12% Similarity=0.125 Sum_probs=105.6 Template_Neff=10.100
9777
9778 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKK----DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS-----DV-- 611 (747)
9779 Q Consensus 543 lve~G~I~~LL~LL~ss~d----~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~-----eV-- 611 (747)
9780 +++.|+++.|+.++.. .. ..++..++.+|.+++..+.. ....+.+.++++.|..++...+. ..
9781 T Consensus 204 l~~~g~~~~L~~ll~~-~~~~~~~~v~~~al~~L~~L~~~~~~-----~~~~~~e~~~i~~L~~lL~~~~~~~~~~~~~~ 277 (651)
9782 T 3GRL_A 204 VAFENAFERLLDIITE-EGNSDGGIVVEDCLILLQNLLKNNNS-----NQNFFKEGSYIQRMKPWFEVGDENSGWSAQKV 277 (651)
9783 T ss_dssp HHHTTHHHHHHHHHHH-HTGGGSHHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTCGGGGGGGGCCCSCSSCCCHHHH
9784 T ss_pred HHhCChHHHHHHHHHH-hCCCCccHHHHHHHHHHHHHHhCCHH-----HHHHHHhcChHHHHHHHHhcCCccCCCchHHH
9785 Confidence 4577889999998873 32 25777899999999875432 34455567889999988874331 11
9786
9787
9788 Q NP_000290.2 612 --VRSGASLLSNMSRH-------PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFS 681 (747)
9789 Q Consensus 612 --r~~AL~aLsnLa~~-------~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve 681 (747)
9790 ...++.++..++.. ... ..+...++++.|+.++.... .+..++..++.+|++++..++.....+.+
9791 T Consensus 278 ~~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~g~l~~L~~ll~~~~----~~~~v~~~a~~~La~l~~~~~~~q~~~~~ 353 (651)
9792 T 3GRL_A 278 TNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMATG----VPADILTETINTVSEVIRGCQVNQDYFAS 353 (651)
9793 T ss_dssp HHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTCSS----CCHHHHHHHHHHHHHHHTTCHHHHHHHHH
9794 T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHhcCHHHHHHHHh
9795 Confidence 22334444444421 112 23356678888888886520 14578889999999998865555444444
9796
9797
9798 Q NP_000290.2 682 S--------SMLNNIINLCRSS-ASPKAAEAARLLLSDMWSS-KELQGVL 721 (747)
9799 Q Consensus 682 ~--------giL~~Ll~LL~s~-~d~eVr~aAL~aLsnL~~~-~~~~~~~ 721 (747)
9800 . +.+..|+.++... .+..++..++.+|.+++.. .+.+..+
9801 T Consensus 354 ~~~~~~~~~~~l~~Ll~~l~~~~~~~~~r~~al~~L~~~~~~~~~~~~~l 403 (651)
9802 T 3GRL_A 354 VNAPSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEI 403 (651)
9803 T ss_dssp CEESSSSCEEHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHTTCHHHHHHH
9804 T ss_pred CCCCCCCCchHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
9805 Confidence 2 2355666665432 1567888999999666653 3334333
9806
9807
9808 No 176
9809 >3TT9_A Plakophilin-2; CELL ADHESION; HET: GOL; 1.55A {Homo sapiens}
9810 Probab=96.31 E-value=1.5e-05 Score=72.85 Aligned_cols=113 Identities=18% Similarity=0.215 Sum_probs=69.5 Template_Neff=12.300
9811
9812 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP---------------NQNVQQAAAG 309 (747)
9813 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~---------------d~eVr~~AL~ 309 (747)
9814 +++.++.++. ..+..++..++.++.+++... .....+...+++..+..++... +..++..++.
9815 T Consensus 95 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 173 (233)
9816 T 3TT9_A 95 GVPRLLQVLKQTRDLETKKQITGLLWNLSSND-KLKNLMITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTG 173 (233)
9817 T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSG-GGHHHHHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHH
9818 T ss_pred cHHHHHHHHhhCCCHHHHHHHHHHHHHHccCH-HHHHHhhhhcHHHHHHHHHhhccCCCCCCCCcccCCCcHHHHHHHHH
9819 Confidence 4555666665 456778888999999987633 2233333344555555554322 4567778888
9820
9821
9822 Q NP_000290.2 310 ALRNLVFRSTTNKLETRRQNG-IREAVSLLRRTG------NAEIQKQLTGLLWNLSST 360 (747)
9823 Q Consensus 310 aLs~La~~~~~~~~~ll~~~I-L~~Ll~lL~ss~------d~eVr~~AL~aLsnLas~ 360 (747)
9824 ++.+++...+.....+...+. ++.+..++. .. ++.++..++.+|.+++..
9825 T Consensus 174 ~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~~L~~l~~~ 230 (233)
9826 T 3TT9_A 174 CLRNMSSAGADGRKAMRRCDGLIDSLVHYVR-GTIADYQPDDKATENCVCILHNLSYQ 230 (233)
9827 T ss_dssp HHHHHTTSCHHHHHHHHTSTTHHHHHHHHHH-HHHHTTCTTCHHHHHHHHHHHHHCCC
9828 T ss_pred HHHHHHhcCHHHHHHHHHcccHHHHHHHHHH-cccccCCCChHHHHHHHHHHHHhhhc
9829 Confidence 888887643333333433344 777777775 33 466777788888777653
9830
9831
9832 No 177
9833 >5D5K_C Importin subunit alpha-1, Poly [ADP-ribose]; PARP-2 NLS, PARP-2, poly(ADP-ribose)polymerase-2, Importin; 1.9A {Mus musculus}
9834 Probab=96.29 E-value=1.5e-05 Score=79.23 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=78.1 Template_Neff=13.100
9835
9836 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-TTNKLE 324 (747)
9837 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~-~~~~~~ 324 (747)
9838 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++... ......
9839 T Consensus 273 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 352 (466)
9840 T 5D5K_C 273 ALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVY 352 (466)
9841 T ss_dssp GGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHH
9842 T ss_pred hhHhHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHH
9843 Confidence 4555666666667788888999998887654433333444467777888887777788889999998887642 222222
9844
9845
9846 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
9847 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
9848 +...++++.+...+. ..++.++..++.++..++.
9849 T Consensus 353 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~ 386 (466)
9850 T 5D5K_C 353 LVHCGIIEPLMNLLS-AKDTKIIQVILDAISNIFQ 386 (466)
9851 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHH
9852 T ss_pred HHhCCcHHHHHHHhh-cCCHHHHHHHHHHHHHHHH
9853 Confidence 333346777777776 5567788889999988876
9854
9855
9856 No 178
9857 >4UAF_B Importin alpha 1 import receptor; importin karyopherin complex NLS, PROTEIN; HET: PO4; 1.698A {Mus musculus}
9858 Probab=96.28 E-value=1.6e-05 Score=79.14 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=78.0 Template_Neff=13.100
9859
9860 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-TTNKLE 324 (747)
9861 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~-~~~~~~ 324 (747)
9862 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++... ......
9863 T Consensus 273 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 352 (466)
9864 T 4UAF_B 273 ALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVY 352 (466)
9865 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHH
9866 Confidence 4555666666667788888999999887654433333444467777888887777788889999998887642 222222
9867
9868
9869 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
9870 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
9871 +...++++.+...+. ..++.++..++.++..++.
9872 T Consensus 353 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~ 386 (466)
9873 T 4UAF_B 353 LVHCGIIEPLMNLLS-AKDTKIIQVILDAISNIFQ 386 (466)
9874 T ss_pred HHhCCcHHHHHHHhh-cCCHHHHHHHHHHHHHHHH
9875 Confidence 333346777777776 5567788889999988876
9876
9877
9878 No 179
9879 >2JDQ_A IMPORTIN ALPHA-1 SUBUNIT, POLYMERASE BASIC; TRANSPORT, PB2 SUBUNIT, NUCLEAR PROTEIN; 2.2A {HOMO SAPIENS}
9880 Probab=96.23 E-value=1.8e-05 Score=78.41 Aligned_cols=134 Identities=18% Similarity=0.203 Sum_probs=87.8 Template_Neff=13.000
9881
9882 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9883 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9884 +++.+...+.+.+..++..++.++..++.........+...++++.+...+.+.++.++..++.++..++..........
9885 T Consensus 235 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 314 (450)
9886 T 2JDQ_A 235 VCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTV 314 (450)
9887 T ss_dssp THHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
9888 T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHhhCChHHHHHHhhcchHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
9889 Confidence 45566666666677888889999998887544333333334677778888877777888899999998876544333333
9890
9891
9892 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST--DELKEELIA-DALPVLADRVI 380 (747)
9893 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~--~~~~~~Lve-giLe~Lv~LL~ 380 (747)
9894 ...++++.+...+. ..++.++..++.++..++.. ......+.. ++++.|..++.
9895 T Consensus 315 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 371 (450)
9896 T 2JDQ_A 315 IDANIFPALISILQ-TAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLT 371 (450)
9897 T ss_dssp HHTTHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGG
9898 T ss_pred HhCCHHHHHHHHHh-cCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHCCcHHHHHHHhh
9899 Confidence 34457777777776 55677888888888888764 222222222 45555555554
9900
9901
9902 No 180
9903 >3IFQ_A plakoglobin, E-cadherin; armadillo repeat, Cardiomyopathy, Cell adhesion; HET: SO4; 2.8A {Homo sapiens}
9904 Probab=96.23 E-value=1.8e-05 Score=80.55 Aligned_cols=367 Identities=18% Similarity=0.234 Sum_probs=218.1 Template_Neff=13.100
9905
9906 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
9907 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
9908 .+++.+...+.+.++.++..++.++..+....+.....+...++++.+...+... +..++..++.++..+..... ...
9909 T Consensus 145 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~-~~~ 223 (553)
9910 T 3IFQ_A 145 DGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQALVQIMRNYSYEKLLWTTSRVLKVLSVCPS-NKP 223 (553)
9911 T ss_dssp TGGGGTGGGGGSSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTT-HHH
9912 T ss_pred CHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCCcc-hHH
9913 Confidence 4556666667667778888899999988764443333333445677777777654 56778888888888876322 222
9914
9915
9916 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
9917 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
9918 .+...++++.+...+. ..++.++..++.++..++....... ...++++.+..++.. .++++.
9919 T Consensus 224 ~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~-~~~~~~~~l~~~l~~----------------~~~~~~ 285 (553)
9920 T 3IFQ_A 224 AIVEAGGMQALGKHLT-SNSPRLVQNCLWTLRNLSDVATKQE-GLESVLKILVNQLSV----------------DDVNVL 285 (553)
9921 T ss_dssp HHHHTTHHHHHHGGGG-SSCHHHHHHHHHHHHHHHTTCTTCS-CCHHHHHHHHTTTTC----------------CCHHHH
9922 T ss_pred HHHHCchHHHHHHHHh-cCCHHHHHHHHHHHHHhCChhHHHH-HHHHHHHHHHHHcCC----------------CCHHHH
9923 Confidence 3333456777777776 5567788888888888876432211 112455555555532 133333
9924
9925
9926 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
9927 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
9928 ..+..++..-.. ..+ ...+.+. -.+.++.++..+.. ..-+..-.+.+..+|.++.
9929 T Consensus 286 ~~a~~~l~~l~~------~~~--------------~~~~~~~-~~~~~~~l~~~l~~----~~~~~~~~~~a~~~l~~l~ 340 (553)
9930 T 3IFQ_A 286 TCATGTLSNLTC------NNS--------------KNKTLVT-QNSGVEALIHAILR----AGDKDDITEPAVCALRHLT 340 (553)
9931 T ss_dssp HHHHHHHHHHTT------TCH--------------HHHHHHT-TTTHHHHHHHHHHH----HTTCHHHHHHHHHHHHHHT
9932 T ss_pred HHHHHHHHHHHc------CCH--------------HHHHHHH-HccHHHHHHHHHHH----cCCChHhHHHHHHHHHHHh
9933 Confidence 333333321100 000 0000000 01233333332211 0011222333344444443
9934
9935
9936 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
9937 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
9938 ...+.. ......+...++++.++.++....++.
9939 T Consensus 341 ~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~l~~~l~~~~~~~ 373 (553)
9940 T 3IFQ_A 341 SRHPEA-----------------------------------------------EMAQNSVRLNYGIPAIVKLLNQPNQWP 373 (553)
9941 T ss_dssp SSSTTH-----------------------------------------------HHHHHHHHTTTHHHHHHHGGGCTTCHH
9942 T ss_pred cCCChH-----------------------------------------------HHHHHHHHHcchHHHHHHHHcCCCChH
9943 Confidence 211100 000112234566788888887322367
9944
9945
9946 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS---------------------DVVRSGASLLSNM 622 (747)
9947 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~---------------------eVr~~AL~aLsnL 622 (747)
9948 ++..++.+|.+++.... ....+...++++.|..++.+.+. .++..++.+|.++
9949 T Consensus 374 ~~~~a~~~l~~l~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 447 (553)
9950 T 3IFQ_A 374 LVKATIGLIRNLALCPA------NHAPLQEAAVIPRLVQLLVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGALHIL 447 (553)
9951 T ss_dssp HHHHHHHHHHHHTTSGG------GHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCCCTTCSSCCHHHHHHHHHHHHHHH
9952 T ss_pred HHHHHHHHHHHHhcCcc------cHHHHHHccHHHHHHHHHHHcCcchhHHHhhcccCccccCCCHHHHHHHHHHHHHHH
9953 Confidence 78889999999887532 12333456788888888876554 7888899999998
9954
9955
9956 Q NP_000290.2 623 SRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
9957 Q Consensus 623 a~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
9958 +..... ......++++.+..++.+ .++.++..++.+|.+++.. +.....+.+.++++.|..++.+. ++.++
9959 T Consensus 448 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~v~ 519 (553)
9960 T 3IFQ_A 448 ARDPMNRMEIFRLNTIPLFVQLLYS------SVENIQRVAAGVLCELAQD-KEAADAIDAEGASAPLMELLHSR-NEGTA 519 (553)
9961 T ss_dssp TTSHHHHHHHHHTTCHHHHHHHTTC------SCHHHHHHHHHHHHHHTTS-HHHHHHHHHTTTHHHHHHHTTCS-SHHHH
9962 T ss_pred hcChhhHHHHHHcCChHHHHHHHhC------CCHHHHHHHHHHHHHHHcC-HHHHHHHHHCCcHHHHHHHHhCC-CHHHH
9963 Confidence 875333 233445677888888775 3678899999999999875 44555555667888898888877 78899
9964
9965
9966 Q NP_000290.2 702 EAARLLLSDMWSSKE 716 (747)
9967 Q Consensus 702 ~aAL~aLsnL~~~~~ 716 (747)
9968 ..++.+|.+++...+
9969 T Consensus 520 ~~a~~~l~~l~~~~~ 534 (553)
9970 T 3IFQ_A 520 TYAAAVLFRISEDKN 534 (553)
9971 T ss_dssp HHHHHHHHHTTSTTC
9972 T ss_pred HHHHHHHHHHHcccC
9973 Confidence 999999999996543
9974
9975
9976 No 181
9977 >4BQK_A IMPORTIN SUBUNIT ALPHA-1A, T-DNA BORDER; TRANSPORT PROTEIN, HYDROLASE, NUCLEAR LOCALIZATION; HET: PEG; 1.997A {ORYZA SATIVA}
9978 Probab=96.23 E-value=1.9e-05 Score=78.53 Aligned_cols=116 Identities=19% Similarity=0.202 Sum_probs=77.5 Template_Neff=13.000
9979
9980 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
9981 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
9982 .+++.+...+.+.+..++..++.++..+....+.....+...++++.+...+.+.+..++..++.++..++.........
9983 T Consensus 172 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 251 (456)
9984 T 4BQK_A 172 PALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQC 251 (456)
9985 T ss_dssp THHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
9986 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCChHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCHHHHHH
9987 Confidence 34556666666677788888999998887654433333334466777777777777788888999998887654333233
9988
9989
9990 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
9991 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
9992 +...++++.+...+....++.++..++.++..++..
9993 T Consensus 252 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~ 287 (456)
9994 T 4BQK_A 252 IIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAG 287 (456)
9995 T ss_dssp HHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTS
9996 T ss_pred HHHCChHHHHHHHHHcCCCHHHHHHHHHHHHHHhcC
9997 Confidence 333456677777775222566777888888887754
9998
9999
10000 No 182
10001 >4U5L_A deltaIBB-importin-alpha1; TPX2, inhibitor, TRANSPORT PROTEIN; HET: 3D6; 2.53A {Mus musculus}
10002 Probab=96.17 E-value=2.2e-05 Score=76.74 Aligned_cols=115 Identities=21% Similarity=0.205 Sum_probs=78.3 Template_Neff=13.200
10003
10004 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
10005 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
10006 .+++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.++.++..++.++..++...+.....
10007 T Consensus 180 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 259 (426)
10008 T 4U5L_A 180 QILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQK 259 (426)
10009 T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHH
10010 T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhCCcHHHHHHhhcChHHHHHHHhcCCCccHHHHHHHHHHHHhcCCHHHHHH
10011 Confidence 45556666666677788888999998887654433333344457777888887777788889999998888654333333
10012
10013
10014 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
10015 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
10016 +...++++.+...+. +.++.++..++.++..++..
10017 T Consensus 260 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 294 (426)
10018 T 4U5L_A 260 VIDAGALAVFPSLLT-NPKTNIQKEATWTMSNITAG 294 (426)
10019 T ss_dssp HHHTTGGGGHHHHTT-CSSHHHHHHHHHHHHHHTTS
10020 T ss_pred HhccchHHHHHHHhc-CCChHHHHHHHHHHHHHhcC
10021 Confidence 334456677777775 45667777777777777653
10022
10023
10024 No 183
10025 >4BPL_A IMPORTIN SUBUNIT ALPHA-1A, NUCLEOPLASMIN NLS; TRANSPORT PROTEIN, NUCLEAR IMPORT, NUCLEAR; 2.3A {ORYZA SATIVA}
10026 Probab=96.16 E-value=2.3e-05 Score=77.77 Aligned_cols=135 Identities=18% Similarity=0.197 Sum_probs=84.9 Template_Neff=13.000
10027
10028 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
10029 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
10030 .+++.+...+.+.+..++..++.++..+....+.....+...++++.+...+.+.+..++..++.++..++.........
10031 T Consensus 170 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 249 (454)
10032 T 4BPL_A 170 PALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQC 249 (454)
10033 T ss_dssp THHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
10034 T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCCcHHHHHHHhhCCChHHHHHHHHHHHHHhcCCHHHHHH
10035 Confidence 34556666666677788888999998887654433333334456777777777777788888999998887654333233
10036
10037
10038 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRV 379 (747)
10039 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL 379 (747)
10040 +...++++.+...+....++.++..++.++..++..... ...+.. ++++.|..++
10041 T Consensus 250 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l 306 (454)
10042 T 4BPL_A 250 IIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLL 306 (454)
10043 T ss_dssp HHTTTHHHHHHHHHHSSCCHHHHHHHHHHHHHHHTSCHHHHHHHHHHTCHHHHHHHH
10044 T ss_pred HHHCChHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCcHHHHHHHh
10045 Confidence 333456677777775222567778888888887754321 112222 4555555544
10046
10047
10048 No 184
10049 >4MZ6_E Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial, Importin; ARM repeat, protein transport, Importin; 1.88A {Mus musculus}
10050 Probab=96.12 E-value=2.6e-05 Score=79.03 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=77.9 Template_Neff=12.800
10051
10052 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-TTNKLE 324 (747)
10053 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~-~~~~~~ 324 (747)
10054 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++... ......
10055 T Consensus 317 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 396 (509)
10056 T 4MZ6_E 317 ALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVY 396 (509)
10057 T ss_dssp GGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHH
10058 T ss_pred hHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHH
10059 Confidence 4455566666667788888999998887654433333444467777888887777788889999998887642 222223
10060
10061
10062 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
10063 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
10064 +...++++.+...+. ..++.++..++.++..++.
10065 T Consensus 397 ~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~ 430 (509)
10066 T 4MZ6_E 397 LVHCGIIEPLMNLLS-AKDTKIIQVILDAISNIFQ 430 (509)
10067 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHH
10068 T ss_pred HHhCCCHHHHHHHHh-CCCHHHHHHHHHHHHHHHH
10069 Confidence 333346777777776 5567788889999988876
10070
10071
10072 No 185
10073 >5UMZ_B Importin subunit alpha-1, TNRC6A; mRNA decay, miRNA ARM repeat; HET: GOL; 1.9A {Mus musculus}
10074 Probab=96.12 E-value=2.6e-05 Score=79.03 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=77.9 Template_Neff=12.800
10075
10076 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-TTNKLE 324 (747)
10077 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~-~~~~~~ 324 (747)
10078 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++... ......
10079 T Consensus 317 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 396 (509)
10080 T 5UMZ_B 317 ALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVY 396 (509)
10081 T ss_dssp GGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHH
10082 T ss_pred hHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHH
10083 Confidence 4455566666667788888999998887654433333444467777888887777788889999998887642 222223
10084
10085
10086 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
10087 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
10088 +...++++.+...+. ..++.++..++.++..++.
10089 T Consensus 397 ~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~ 430 (509)
10090 T 5UMZ_B 397 LVHCGIIEPLMNLLS-AKDTKIIQVILDAISNIFQ 430 (509)
10091 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHH
10092 T ss_pred HHhCCCHHHHHHHHh-CCCHHHHHHHHHHHHHHHH
10093 Confidence 333346777777776 5567788889999988876
10094
10095
10096 No 186
10097 >4E4V_A Importin subunit alpha-2; armadillo repeat, karyopherin, importin, nuclear; HET: GOL, DTT; 2.5283A {Homo sapiens}
10098 Probab=96.12 E-value=2.7e-05 Score=78.66 Aligned_cols=113 Identities=17% Similarity=0.130 Sum_probs=78.1 Template_Neff=12.700
10099
10100 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRST-TNKLE 324 (747)
10101 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~-~~~~~ 324 (747)
10102 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++.... .....
10103 T Consensus 292 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 371 (485)
10104 T 4E4V_A 292 ALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVY 371 (485)
10105 T ss_dssp GGGGHHHHHTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHH
10106 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCHHHHHH
10107 Confidence 45556666666677888889999998876544333334444677778888877777888889999988876422 22222
10108
10109
10110 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
10111 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
10112 +...++++.+...+. ..++.++..++.++..++.
10113 T Consensus 372 ~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~ 405 (485)
10114 T 4E4V_A 372 LVHCGIIEPLMNLLT-AKDTKIILVILDAISNIFQ 405 (485)
10115 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHH
10116 T ss_pred HHhCCcHHHHHHHhh-cCCHHHHHHHHHHHHHHHH
10117 Confidence 333346777777776 5567788889999988886
10118
10119
10120 No 187
10121 >3GQ2_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.18A {Bos taurus}
10122 Probab=96.07 E-value=3.4e-05 Score=85.21 Aligned_cols=176 Identities=12% Similarity=0.192 Sum_probs=126.8 Template_Neff=10.100
10123
10124 Q NP_000290.2 543 LYHSDAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSSG--------------MSQLIGL-KEKGLPQIARLLQS 606 (747)
10125 Q Consensus 543 lve~G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~~--------------~~~~lli-e~giI~~Ll~LL~s 606 (747)
10126 ++..++++.|+.+|... .+..++..++.+|.+++...+. .. .....+. +.+.++.|+.++.+
10127 T Consensus 56 ~v~~~~l~~Li~~L~~~~~d~~~~~~al~~L~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Ll~ll~~ 133 (651)
10128 T 3GQ2_A 56 EVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEE--EEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEE 133 (651)
10129 T ss_dssp HHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHCCSSS--CC----------CHHHHHHHHHHTSHHHHHTHHHHTTC
10130 T ss_pred HHHccHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCh--HhhhhcccccchHHHHHHHHHHHhcCchHHHHHHHccC
10131 Confidence 46778999999999731 3567788899999998864321 00 0012223 57888999999888
10132
10133
10134 Q NP_000290.2 607 GNSDVVRSGASLLSNMSRHP--LLH-RVM-GNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSS 682 (747)
10135 Q Consensus 607 ~d~eVr~~AL~aLsnLa~~~--e~~-~ll-~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~ 682 (747)
10136 .++.++..++++|.+++... ... .++ ..++++.|+.+|.+ .+..++..++.+|.+++..+++....+...
10137 T Consensus 134 ~~~~~~~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~~------~~~~i~~~a~~~L~~l~~~~~~~~~~l~~~ 207 (651)
10138 T 3GQ2_A 134 FDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLAD------SREVIRNDGVLLLQALTRSNGAIQKIVAFE 207 (651)
10139 T ss_dssp CCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHGGGGGC------SSHHHHHHHHHHHHHHHTTCHHHHHHHHHT
10140 T ss_pred CCHHHHHHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhcC------CCHHHHHHHHHHHHHHhCCCHHHHHHHHhC
10141 Confidence 88889999999999998773 222 233 45678889998876 367888999999999998555666666677
10142
10143
10144 Q NP_000290.2 683 SMLNNIINLCRSSAS---PKAAEAARLLLSDMWSSK-ELQGVLRQQGF 726 (747)
10145 Q Consensus 683 giL~~Ll~LL~s~~d---~eVr~aAL~aLsnL~~~~-~~~~~~~~~~~ 726 (747)
10146 ++++.|+.++..... ..++..++.+|.+|+... ..+..++..|+
10147 T Consensus 208 g~~~~L~~ll~~~~~~~~~~v~~~al~~L~~L~~~~~~~~~~~~e~~~ 255 (651)
10148 T 3GQ2_A 208 NAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSY 255 (651)
10149 T ss_dssp THHHHHHHHHHHTTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTC
10150 T ss_pred ChHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHhCCHHHHHHHHhcCh
10151 Confidence 889999998875411 257888999999988644 44555555554
10152
10153
10154 No 188
10155 >3GRL_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.0A {Bos taurus}
10156 Probab=96.07 E-value=3.4e-05 Score=85.21 Aligned_cols=176 Identities=12% Similarity=0.192 Sum_probs=126.4 Template_Neff=10.100
10157
10158 Q NP_000290.2 543 LYHSDAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSSG--------------MSQLIGL-KEKGLPQIARLLQS 606 (747)
10159 Q Consensus 543 lve~G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~~--------------~~~~lli-e~giI~~Ll~LL~s 606 (747)
10160 ++..++++.|+.+|... .+..++..++.+|.+++...+. .. .....+. +.+.++.|+.++.+
10161 T Consensus 56 ~v~~~~l~~Li~~L~~~~~d~~~~~~al~~L~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Ll~ll~~ 133 (651)
10162 T 3GRL_A 56 EVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEE--EEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEE 133 (651)
10163 T ss_dssp HCCCCCHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC----------------CHHHHHHHHHHHSTHHHHHHHHHTTC
10164 T ss_pred HHHccHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCh--HhhhhcccccchHHHHHHHHHHHhcCchHHHHHHHccC
10165 Confidence 46778999999999731 3567788899999998864321 00 0012223 57888999999888
10166
10167
10168 Q NP_000290.2 607 GNSDVVRSGASLLSNMSRHP--LLH-RVM-GNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSS 682 (747)
10169 Q Consensus 607 ~d~eVr~~AL~aLsnLa~~~--e~~-~ll-~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~ 682 (747)
10170 .++.++..++++|.+++... ... .++ ..++++.|+.+|.+ .+..++..++.+|.+++..+++....+...
10171 T Consensus 134 ~~~~~~~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~~------~~~~i~~~a~~~L~~l~~~~~~~~~~l~~~ 207 (651)
10172 T 3GRL_A 134 FDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLAD------SREVIRNDGVLLLQALTRSNGAIQKIVAFE 207 (651)
10173 T ss_dssp CCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGC------SSHHHHHHHHHHHHHHHTTCHHHHHHHHHT
10174 T ss_pred CCHHHHHHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhcC------CCHHHHHHHHHHHHHHhCCCHHHHHHHHhC
10175 Confidence 88889999999999998773 222 233 45678889998876 367888999999999998555666666677
10176
10177
10178 Q NP_000290.2 683 SMLNNIINLCRSSAS---PKAAEAARLLLSDMWSSK-ELQGVLRQQGF 726 (747)
10179 Q Consensus 683 giL~~Ll~LL~s~~d---~eVr~aAL~aLsnL~~~~-~~~~~~~~~~~ 726 (747)
10180 ++++.|+.++..... ..++..++.+|.+|+... ..+..++..|+
10181 T Consensus 208 g~~~~L~~ll~~~~~~~~~~v~~~al~~L~~L~~~~~~~~~~~~e~~~ 255 (651)
10182 T 3GRL_A 208 NAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSY 255 (651)
10183 T ss_dssp THHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTC
10184 T ss_pred ChHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHhCCHHHHHHHHhcCh
10185 Confidence 889999998875411 257888999999988644 44555555554
10186
10187
10188 No 189
10189 >4V3Q_A YIII_M4_AII; DE NOVO PROTEIN, PROTEIN ENGINEERING; HET: GOL, CA; 1.8A {SYNTHETIC CONSTRUCT}
10190 Probab=96.03 E-value=3.4e-05 Score=69.70 Aligned_cols=112 Identities=26% Similarity=0.317 Sum_probs=74.8 Template_Neff=12.900
10191
10192 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
10193 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
10194 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
10195 T Consensus 135 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 214 (247)
10196 T 4V3Q_A 135 ALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQKQAV 214 (247)
10197 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
10198 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
10199 Confidence 45556666666677788888899988876543333333344567777777777777888889999988886543333333
10200
10201
10202 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
10203 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
10204 ...++++.+..++. ..++.++..++.++..+.
10205 T Consensus 215 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 246 (247)
10206 T 4V3Q_A 215 KEAGALEKLEQLQS-HENEKIQKEAQEALEKLQ 246 (247)
10207 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHT
10208 T ss_pred HHcCHHHHHHHHHh-CChHHHHHHHHHHHHHHc
10209 Confidence 33456677777775 456677777777776653
10210
10211
10212 No 190
10213 >4TNM_A Importin-alpha3 / MOS6; armadillo repeat; 2.9A {Arabidopsis thaliana}
10214 Probab=96.03 E-value=3.5e-05 Score=79.51 Aligned_cols=136 Identities=16% Similarity=0.178 Sum_probs=85.8 Template_Neff=12.300
10215
10216 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
10217 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
10218 .+++.+...+.+.++.++..++.++..++.........+...++++.+...+.+.++.++..++.++..++.........
10219 T Consensus 245 ~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 324 (531)
10220 T 4TNM_A 245 PALPVLERLVQSMDEEVLTDACWALSYLSDNSNDKIQAVIEAGVVPRLIQLLGHSSPSVLIPALRTIGNIVTGDDLQTQM 324 (531)
10221 T ss_pred chHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCChHHHHHHHHhCCCHHHHHHHHHHHHHHHCCCHHHHHH
10222 Confidence 34555666666667778888889988887654433333344467777778787777788888999998887654333223
10223
10224
10225 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVI 380 (747)
10226 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~ 380 (747)
10227 ....++++.+..++....++.++..++.++..++... .....+.. ++++.|..++.
10228 T Consensus 325 ~~~~~~~~~l~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 382 (531)
10229 T 4TNM_A 325 VLDQQALPCLLNLLKNNYKKSIKKEACWTISNITAGNADQIQAVIDAGIIQSLVWVLQ 382 (531)
10230 T ss_pred HHHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHhc
10231 Confidence 3333566777777752235677888888888887643 22222222 45555555553
10232
10233
10234 No 191
10235 >4GMO_A Putative uncharacterized protein; ARM, HEAT, solenoid, nuclear transport; 2.1A {Chaetomium thermophilum var. thermophilum DSM 1495}
10236 Probab=95.93 E-value=5.4e-05 Score=85.22 Aligned_cols=94 Identities=14% Similarity=0.083 Sum_probs=69.0 Template_Neff=8.600
10237
10238 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLV-DLLRSPNQNVQQAAAGALRNLVFRS-TTNK 322 (747)
10239 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll-~lL~s~d~eVr~~AL~aLs~La~~~-~~~~ 322 (747)
10240 ..+..|+..|.+.++.++..++.+|.+++.. +.....+...++++.|+ .++.+.+..++..++.+|.+++... ....
10241 T Consensus 34 ~~i~~Li~~L~S~~~~~r~~A~~aL~~L~~d-~~~r~~l~~~g~i~~Li~~LL~d~~~~v~~~A~~aLrNLs~~~~~~~~ 112 (684)
10242 T 4GMO_A 34 DKILPVLKDLKSPDAKSRTTAAGAIANIVQD-AKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFC 112 (684)
10243 T ss_dssp CCCHHHHHHHSSSCCSHHHHHHHHHHHHTTS-HHHHHHHHHTTHHHHCCCCCTTCSCHHHHHHHHHHHHHHHHHSCHHHH
10244 T ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHCChHHHHHHHHccCCCHHHHHHHHHHHHHHhccCChHHH
10245 Confidence 4566778888888888999999999998763 44555566678888888 8888878889999999999998652 2333
10246
10247
10248 Q NP_000290.2 323 LETRRQNGIREAVSLLR 339 (747)
10249 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ 339 (747)
10250 ..+...+++..|..++.
10251 T Consensus 113 ~~l~~~g~l~~L~~lL~ 129 (684)
10252 T 4GMO_A 113 VHLYRLDVLTAIEHAAK 129 (684)
10253 T ss_dssp HHHHHTTHHHHHHHHHH
10254 T ss_pred HHHHHCChHHHHHHHHH
10255 Confidence 34444566676666664
10256
10257
10258 No 192
10259 >4PLS_B Arm00010; PEPTIDE BINDING PROTEIN, designed armadillo; HET: CA; 2.35A {synthetic construct}
10260 Probab=95.89 E-value=4.9e-05 Score=69.42 Aligned_cols=134 Identities=25% Similarity=0.295 Sum_probs=87.2 Template_Neff=13.200
10261
10262 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
10263 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
10264 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..++..........
10265 T Consensus 86 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 165 (281)
10266 T 4PLS_B 86 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 165 (281)
10267 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
10268 T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
10269 Confidence 45556666666677788888888888876543333333344677777777777777888899999988876543333333
10270
10271
10272 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
10273 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
10274 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
10275 T Consensus 166 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 221 (281)
10276 T 4PLS_B 166 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLS 221 (281)
10277 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
10278 T ss_pred HHCChHHHHHHHhc-CCcHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHcc
10279 Confidence 33456677777776 5567788888888888876422 2222222 56666666664
10280
10281
10282 No 193
10283 >5MFO_F YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: CA, EDO; 1.3A {synthetic construct}
10284 Probab=95.88 E-value=5e-05 Score=65.80 Aligned_cols=112 Identities=26% Similarity=0.298 Sum_probs=74.3 Template_Neff=13.100
10285
10286 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
10287 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
10288 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++.........+
10289 T Consensus 89 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 168 (202)
10290 T 5MFO_F 89 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAV 168 (202)
10291 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
10292 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHhcChHHHHHHH
10293 Confidence 45556666666677788888999988876543333333344677777777777777888889999988886543333333
10294
10295
10296 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
10297 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
10298 ...++++.+..++. ..++.++..++.++..++
10299 T Consensus 169 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 200 (202)
10300 T 5MFO_F 169 KEAGAEPALEQLQS-SPNEKIQKEAQEALEKIQ 200 (202)
10301 T ss_dssp HHTTHHHHHHTTTT-CSSHHHHHHHHHHHHHHH
10302 T ss_pred HHCCHHHHHHHHHc-CCCHHHHHHHHHHHHHHH
10303 Confidence 33456666777775 446677777777776654
10304
10305
10306 No 194
10307 >2RU4_A Armadillo Repeat Protein, N-terminal fragment; solenoid repeat, Armadillo repeat motif; NMR {synthetic construct}
10308 Probab=95.88 E-value=5.2e-05 Score=59.81 Aligned_cols=110 Identities=25% Similarity=0.264 Sum_probs=70.0 Template_Neff=12.800
10309
10310 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRR 327 (747)
10311 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~ 327 (747)
10312 +.+...+...+..++..++.++..++.........+...+.++.+...+.+.++.++..++.++.+++.........+..
10313 T Consensus 4 ~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 83 (115)
10314 T 2RU4_A 4 PQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVID 83 (115)
10315 T ss_dssp CCCCCCCCCCCCCCCSCCCCCCCCCCCSCTTHHHHHCCSSSHHHHHHGGGSSCHHHHHHHHHHHHHHHTTCHHHHHHHHT
10316 T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCchHHHHHHH
10317 Confidence 34455555556677888888888887654333333444456777777777667778888888888887554333333333
10318
10319
10320 Q NP_000290.2 328 QNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
10321 Q Consensus 328 ~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
10322 .+.++.+...+. ..++.++..++.++.+++
10323 T Consensus 84 ~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~ 113 (115)
10324 T 2RU4_A 84 AGALPALVQLLS-SPNEQILQEALWALSNIA 113 (115)
10325 T ss_dssp TTHHHHHHHGGG-SSCHHHHHHHHHHHHHHH
10326 T ss_pred CCcHHHHHHHhc-CCCHHHHHHHHHHHHHHh
10327 Confidence 456666666665 445667777777776654
10328
10329
10330 No 195
10331 >5AEI_B DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII; DE NOVO PROTEIN, PROTEIN-PEPTIDE COMPLEX; HET: CA, ACT; 1.83A {SYNTHETIC CONSTRUCT}
10332 Probab=95.87 E-value=5.1e-05 Score=69.48 Aligned_cols=114 Identities=26% Similarity=0.296 Sum_probs=74.7 Template_Neff=13.200
10333
10334 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
10335 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
10336 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..++.........+
10337 T Consensus 47 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 126 (286)
10338 T 5AEI_B 47 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 126 (286)
10339 T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
10340 T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHH
10341 Confidence 45556666666677888889999988876544333333344567777777777777888889999988876433332233
10342
10343
10344 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
10345 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
10346 ...++++.+...+. ..++.++..++.++..++..
10347 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 160 (286)
10348 T 5AEI_B 127 IDAGALPALVQLLS-SPNEQILQEALWALSNIASG 160 (286)
10349 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTS
10350 T ss_pred HhCCHHHHHHHHcc-CCCHHHHHHHHHHHHHHHcC
10351 Confidence 33446666666665 44566777777777776653
10352
10353
10354 No 196
10355 >5MFD_C YIIIM''6AII, Capsid decoration protein,pD_(KR)5; Designed armadillo repeat protein, peptide; HET: CA; 2.3A {synthetic construct}
10356 Probab=95.87 E-value=5.1e-05 Score=70.81 Aligned_cols=157 Identities=20% Similarity=0.303 Sum_probs=116.5 Template_Neff=13.300
10357
10358 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
10359 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
10360 +.++++.+..++. +.++.++..++.+|.+++..... ....+...++++.+..++.+.++.++..++.+|.+++.
10361 T Consensus 128 ~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~ 201 (328)
10362 T 5MFD_C 128 DAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIAS 201 (328)
10363 T ss_dssp HTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHT
10364 T ss_pred HCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHH-----HHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHc
10365 Confidence 4456777888887 46777888899999998864332 22333456788888888888888899999999999987
10366
10367
10368 Q NP_000290.2 625 H-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
10369 Q Consensus 625 ~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
10370 . ... ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.+..++.+. ++.++.
10371 T Consensus 202 ~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~ 274 (328)
10372 T 5MFD_C 202 GGNEQIQAVIDAGALPALVQLLSS------PNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSP-NEQILQ 274 (328)
10373 T ss_dssp SCHHHHHHHHHTTCHHHHHHGGGC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS-CHHHHH
10374 T ss_pred CCHHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHhcCC-CHHHHH
10375 Confidence 6 222 233445677888888766 3677889999999999865555545555566788888888766 788899
10376
10377
10378 Q NP_000290.2 703 AARLLLSDMWSS 714 (747)
10379 Q Consensus 703 aAL~aLsnL~~~ 714 (747)
10380 .++.+|.+++..
10381 T Consensus 275 ~a~~~l~~l~~~ 286 (328)
10382 T 5MFD_C 275 EALWTLGNIASG 286 (328)
10383 T ss_dssp HHHHHHHHHHTS
10384 T ss_pred HHHHHHHHHhCC
10385 Confidence 999999999865
10386
10387
10388 No 197
10389 >5MFO_E YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: EDO, CA; 1.3A {synthetic construct}
10390 Probab=95.87 E-value=5.2e-05 Score=65.68 Aligned_cols=112 Identities=26% Similarity=0.298 Sum_probs=74.3 Template_Neff=13.100
10391
10392 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
10393 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
10394 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++.........+
10395 T Consensus 89 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 168 (202)
10396 T 5MFO_E 89 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAV 168 (202)
10397 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
10398 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHHHHHHHH
10399 Confidence 45556666666667788888899988876543333333344677777777777777888889999988886543333333
10400
10401
10402 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
10403 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
10404 ...++++.+..++. ..++.++..++.++..++
10405 T Consensus 169 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 200 (202)
10406 T 5MFO_E 169 KEAGAEPALEQLQS-SPNEKIQKEAQEALEKIQ 200 (202)
10407 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHC
10408 T ss_pred HHCCHHHHHHHHHc-CCCHHHHHHHHHHHHHHH
10409 Confidence 33456666777775 446677777777776654
10410
10411
10412 No 198
10413 >5D5K_C Importin subunit alpha-1, Poly [ADP-ribose]; PARP-2 NLS, PARP-2, poly(ADP-ribose)polymerase-2, Importin; 1.9A {Mus musculus}
10414 Probab=95.85 E-value=5.5e-05 Score=74.91 Aligned_cols=158 Identities=19% Similarity=0.271 Sum_probs=114.4 Template_Neff=13.100
10415
10416 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDA-----TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASL 618 (747)
10417 Q Consensus 544 ve~G~I~~LL~LL~ss~d~e-----Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~a 618 (747)
10418 .+.++++.++.++.. .+.. ++..++.+|.+++..... ........++++.+..++.+.++.++..++.+
10419 T Consensus 138 ~~~~~~~~l~~~l~~-~~~~~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~ 211 (466)
10420 T 5D5K_C 138 IKHGAIDPLLALLAV-PDLSTLACGYLRNLTWTLSNLCRNKNP-----APPLDAVEQILPTLVRLLHHNDPEVLADSCWA 211 (466)
10421 T ss_dssp HHTTCHHHHHHTTCS-SCGGGSCHHHHHHHHHHHHHHSCCCSS-----CCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHH
10422 T ss_pred HHCCcHHHHHHHhhC-CCcccccHHHHHHHHHHHHHHHcCCCC-----CCChHHHHHHHHHHHHHHcCCCHHHHHHHHHH
10423 Confidence 355667777777763 3333 677888888888765322 11121225678888888888888899999999
10424
10425
10426 Q NP_000290.2 619 LSNMSRHPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
10427 Q Consensus 619 LsnLa~~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
10428 |.+++.... . ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.+..++.+.
10429 T Consensus 212 l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 284 (466)
10430 T 5D5K_C 212 ISYLTDGPNERIEMVVKKGVVPQLVKLLGA------TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP- 284 (466)
10431 T ss_dssp HHHHTSSCHHHHHHHHTTTCHHHHHHHHTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCS-
10432 T ss_pred HHHHhcCCchHHHHHHHCChHHHHHHHhcC------CCchHHHHHHHHHHHHhcCCHHHHHHHHccChhHhHHHHhhCC-
10433 Confidence 999987632 2 233455677888888876 3678889999999999876455555566667888888888766
10434
10435
10436 Q NP_000290.2 697 SPKAAEAARLLLSDMWSS 714 (747)
10437 Q Consensus 697 d~eVr~aAL~aLsnL~~~ 714 (747)
10438 ++.++..++.+|.+++..
10439 T Consensus 285 ~~~v~~~a~~~l~~l~~~ 302 (466)
10440 T 5D5K_C 285 KTNIQKEATWTMSNITAG 302 (466)
10441 T ss_dssp SHHHHHHHHHHHHHHTTS
10442 T ss_pred CHHHHHHHHHHHHHHHcC
10443 Confidence 788899999999998875
10444
10445
10446 No 199
10447 >1XQS_B HSPBP1 protein, Heat shock 70; armadillo repeat, superhelical twist, CHAPERONE; HET: AMP; 2.9A {Homo sapiens} SCOP: a.118.1.21
10448 Probab=95.84 E-value=5.9e-05 Score=71.37 Aligned_cols=116 Identities=18% Similarity=0.237 Sum_probs=80.5 Template_Neff=11.900
10449
10450 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
10451 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
10452 +++.+..++... +..++..++.++.+++.........+...+.++.+..++...+..++..++.++.+++.........
10453 T Consensus 109 ~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~ 188 (280)
10454 T 1XQS_B 109 ALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGT 188 (280)
10455 T ss_dssp HHHHHHHHHHSCSCHHHHHHHHHHHHHTTSSCHHHHHHHHTTTHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHCGGGHHH
10456 T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHCCHHHHHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHH
10457 Confidence 455566666654 6778888999999988654433334444567777888777667778888999999888654423333
10458
10459
10460 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
10461 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
10462 +...++++.+..++. ..++.++..++.++.+++....
10463 T Consensus 189 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~ 225 (280)
10464 T 1XQS_B 189 LCSMGMVQQLVALVR-TEHSPFHEHVLGALCSLVTDFP 225 (280)
10465 T ss_dssp HHTTTHHHHHHHHHT-SSCCTTHHHHHHHTTTSSTTCH
10466 T ss_pred HHhCCHHHHHHHHHc-CCCcHHHHHHHHHHHHHHhcCH
10467 Confidence 444467777777776 5567788888999998887543
10468
10469
10470 No 200
10471 >4UAF_B Importin alpha 1 import receptor; importin karyopherin complex NLS, PROTEIN; HET: PO4; 1.698A {Mus musculus}
10472 Probab=95.82 E-value=5.9e-05 Score=74.70 Aligned_cols=158 Identities=19% Similarity=0.271 Sum_probs=114.6 Template_Neff=13.100
10473
10474 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDA-----TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASL 618 (747)
10475 Q Consensus 544 ve~G~I~~LL~LL~ss~d~e-----Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~a 618 (747)
10476 .+.++++.++.++.. .+.. ++..++.+|.+++..... ........++++.+..++.+.++.++..++.+
10477 T Consensus 138 ~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~ 211 (466)
10478 T 4UAF_B 138 IKHGAIDPLLALLAV-PDLSTLACGYLRNLTWTLSNLCRNKNP-----APPLDAVEQILPTLVRLLHHNDPEVLADSCWA 211 (466)
10479 T ss_pred HHCCcHHHHHHHhhC-CCcccccHHHHHHHHHHHHHHHcCCCC-----CCChhHHHHHHHHHHHHHcCCCHHHHHHHHHH
10480 Confidence 355667777777763 3333 677888888888865332 11121225678888888888888999999999
10481
10482
10483 Q NP_000290.2 619 LSNMSRHPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
10484 Q Consensus 619 LsnLa~~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
10485 |.+++.... . ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.+..++.+.
10486 T Consensus 212 l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 284 (466)
10487 T 4UAF_B 212 ISYLTDGPNERIEMVVKKGVVPQLVKLLGA------TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP- 284 (466)
10488 T ss_pred HHHHhcCCcHHHHHHHHCChHHHHHHHhcC------CChhHHHHHHHHHHHHhcCCHHHHHHHhccCHHHHHHHHhcCC-
10489 Confidence 999987632 2 233455678888888876 3678889999999999876455555566667888888888766
10490
10491
10492 Q NP_000290.2 697 SPKAAEAARLLLSDMWSS 714 (747)
10493 Q Consensus 697 d~eVr~aAL~aLsnL~~~ 714 (747)
10494 ++.++..++.+|.+++..
10495 T Consensus 285 ~~~v~~~a~~~l~~l~~~ 302 (466)
10496 T 4UAF_B 285 KTNIQKEATWTMSNITAG 302 (466)
10497 T ss_pred CHHHHHHHHHHHHHHhcC
10498 Confidence 788899999999999875
10499
10500
10501 No 201
10502 >1XQR_A HspBP1 protein; armadillo repeat, superhelical twist, CHAPERONE; HET: MSE; 2.1A {Homo sapiens} SCOP: a.118.1.21
10503 Probab=95.82 E-value=6.4e-05 Score=72.71 Aligned_cols=116 Identities=18% Similarity=0.237 Sum_probs=81.0 Template_Neff=11.300
10504
10505 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
10506 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
10507 +++.+..++... ++.++..++.++.+++.........+...++++.+...+...+..++..++.++.+++.........
10508 T Consensus 125 ~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~ 204 (296)
10509 T 1XQR_A 125 ALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGT 204 (296)
10510 T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHH
10511 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHH
10512 Confidence 455566666654 6778889999999998754433334444567777887777667788888999999888754433333
10513
10514
10515 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
10516 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
10517 +...++++.+..++. ..++.++..++.+|.+++....
10518 T Consensus 205 ~~~~~~i~~L~~ll~-~~~~~~~~~a~~~L~~l~~~~~ 241 (296)
10519 T 1XQR_A 205 LCSMGMVQQLVALVR-TEHSPFHEHVLGALCSLVTDFP 241 (296)
10520 T ss_dssp HHHTTHHHHHHHHHT-SCCSTHHHHHHHHHHHHHTTCH
10521 T ss_pred HHhCCHHHHHHHHHc-CCChHHHHHHHHHHHHHHhcCH
10522 Confidence 444567777777776 4566788888899988887543
10523
10524
10525 No 202
10526 >6CRI_R Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
10527 Probab=95.81 E-value=6.2e-05 Score=78.24 Aligned_cols=151 Identities=10% Similarity=0.021 Sum_probs=91.7 Template_Neff=12.500
10528
10529 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ---SGNSDVVRSGASLLSNMS 623 (747)
10530 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~---s~d~eVr~~AL~aLsnLa 623 (747)
10531 ..++.|+.++. +.+..++..++.++..+....+. ....+++.+...+. ..+..++ .++++|+.+.
10532 T Consensus 414 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~~~~l~~~l~~~~~~~~~~r-~a~~~l~~~~ 481 (585)
10533 T 6CRI_R 414 WHIDTIMRVLT-TAGSYVRDDAVPNLIQLITNSVE----------MHAYTVQRLYKAILGDYSQQPLVQ-VAAWCIGEYG 481 (585)
10534 T ss_pred HHHHHHHHHHH-HhccccCccHHHHHHHHHhcCch----------HHHHHHHHHHHHHHCCCCCHHHHH-HHHHHHHHHH
10535 Confidence 35566666666 35566777777777777653211 11234555666653 3344556 7888888877
10536
10537
10538 Q NP_000290.2 624 RHPLLH--------RVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR 693 (747)
10539 Q Consensus 624 ~~~e~~--------~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~ 693 (747)
10540 ...... ......+++.|..++ .+ .+..++..++.+|..+....+. ....++..+..++.
10541 T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~------~~~~vr~~a~~al~~l~~~~~~-----~~~~~~~~l~~~~~ 550 (585)
10542 T 6CRI_R 482 DLLVSGQCEEEEPIQVTEDEVLDILESVLISNM------STSVTRGYALTAIMKLSTRFTC-----TVNRIKKVVSIYGS 550 (585)
10543 T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHHHhcccC------CCHHHHHHHHHHHHHHHhcCCc-----hHHHHHHHHHHHcc
10544 Confidence 642110 111234566666666 33 3567888999999998875332 22234555666666
10545
10546
10547 Q NP_000290.2 694 SSASPKAAEAARLLLSDMWSSKELQGVL 721 (747)
10548 Q Consensus 694 s~~d~eVr~aAL~aLsnL~~~~~~~~~~ 721 (747)
10549 +. ++.++..++.++..+..+......+
10550 T Consensus 551 ~~-~~~vr~~a~~~l~~l~~~~~~~~~l 577 (585)
10551 T 6CRI_R 551 SI-DVELQQRAVEYNALFKKYDHMRSAL 577 (585)
10552 T ss_pred CC-CHHHHHHHHHHHHHhhhHHHHHHHH
10553 Confidence 65 7889999999999988765544443
10554
10555
10556 No 203
10557 >6SA8_A ring-like DARPin-Armadillo fusion H83_D01, LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG; protein fusion, DARPin, Armadillo, shared; 2.4A {synthetic construct}
10558 Probab=95.78 E-value=6.8e-05 Score=80.44 Aligned_cols=136 Identities=26% Similarity=0.298 Sum_probs=92.6 Template_Neff=11.900
10559
10560 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
10561 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
10562 .+++.+...+.+.++.++..++.+|.+++...+.....+...++++.+..++.+.++.++..++.++..++.........
10563 T Consensus 262 ~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 341 (671)
10564 T 6SA8_A 262 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 341 (671)
10565 T ss_dssp TCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
10566 T ss_pred CHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHhChHHHHHHHhcCCcHHHHHHHHHHHHHHhcCCcHHHHH
10567 Confidence 34556666666677788889999999887654333334444567788888888777888889999999987654433333
10568
10569
10570 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVII 381 (747)
10571 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
10572 +...++++.+...+. ..++.++..++.++..++.. ......+.. ++++.|+.++..
10573 T Consensus 342 ~~~~~~l~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 399 (671)
10574 T 6SA8_A 342 VIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSS 399 (671)
10575 T ss_dssp HHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGC
10576 T ss_pred HHhcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCcHHHHHHHHcCcHHHHHHHhcC
10577 Confidence 334456777777776 55677888899999998873 332333333 677777776653
10578
10579
10580 No 204
10581 >5WBJ_A Regulatory-associated protein of TOR 1,Eukaryotic; Raptor, TOS, PROTEIN BINDING; 3.0A {Arabidopsis thaliana}
10582 Probab=95.77 E-value=8.1e-05 Score=89.51 Aligned_cols=168 Identities=12% Similarity=0.072 Sum_probs=120.9 Template_Neff=8.700
10583
10584 Q NP_000290.2 541 GWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG--NSDVVRSGASL 618 (747)
10585 Q Consensus 541 ~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~--d~eVr~~AL~a 618 (747)
10586 ..+...|+++.++.+|. +..++++..++.++.+++..++. .+..+.+.+++..|+.+|... .+.++..++.+
10587 T Consensus 500 ~~~~~~gi~p~ll~lL~-s~~~~lr~~a~~i~a~i~~~d~~-----~q~~l~~~~~l~~ll~~L~~~~~~~~~r~~a~~~ 573 (1287)
10588 T 5WBJ_A 500 DLALSVGIFPYVLKLLQ-TTTNELRQILVFIWTKILALDKS-----CQIDLVKDGGHTYFIRFLDSSGAFPEQRAMAAFV 573 (1287)
10589 T ss_dssp HHHHHHTCHHHHHHGGG-CCCHHHHHHHHHHHHHHHHHCGG-----GHHHHHHTTCHHHHHHHHHCSSCCHHHHHHHHHH
10590 T ss_pred HHHHHCCcHHHHHHHHc-CCCHHHHHHHHHHHHHHHccCHH-----HHHHHHHcCCeeeEEEeecCCCCCHHHHHHHHHH
10591 Confidence 33457789999999998 47788899999999999876443 344556677888899988743 35567788999
10592
10593
10594 Q NP_000290.2 619 LSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTG-NTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS 695 (747)
10595 Q Consensus 619 LsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~-~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~ 695 (747)
10596 |+.++.. ... ..+...+++..+...|..... ....++.++..++.+|..|+...+.........+++..|+.+|.+.
10597 T Consensus 574 Ls~l~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~~lr~~a~~~L~~L~~~~~~~~~~~~~~~~~~~L~~lL~~~ 653 (1287)
10598 T 5WBJ_A 574 LAVIVDGHRRGQEACLEANLIGVCLGHLEASRPSDPQPEPLFLQWLCLCLGKLWEDFMEAQIMGREANAFEKLAPLLSEP 653 (1287)
10599 T ss_dssp HHHHHTTCHHHHHHHHHTTHHHHHHHHCC---------CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHGGGGGCS
10600 T ss_pred HHHHHcCCHhHHHHHHHCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHcCHHHHHHHHhcCC
10601 Confidence 9999876 222 233444677777777761000 0003678899999999999877555555556667788899999877
10602
10603
10604 Q NP_000290.2 696 ASPKAAEAARLLLSDMWSSK 715 (747)
10605 Q Consensus 696 ~d~eVr~aAL~aLsnL~~~~ 715 (747)
10606 ++.++.+++.+|+.++...
10607 T Consensus 654 -~~~VRaaal~aL~~li~~~ 672 (1287)
10608 T 5WBJ_A 654 -QPEVRAAAVFALGTLLDIG 672 (1287)
10609 T ss_dssp -CHHHHHHHHHHHHHTCC--
10610 T ss_pred -CHHHHHHHHHHHHHHHhcC
10611 Confidence 8899999999999998764
10612
10613
10614 No 205
10615 >5Z8H_A Adenomatous polyposis coli protein, Peptide; APC, inhibitor, PROTEIN BINDING-INHIBITOR complex; HET: PHQ, GOL; 1.79A {Homo sapiens}
10616 Probab=95.74 E-value=7.4e-05 Score=71.65 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=76.4 Template_Neff=12.500
10617
10618 Q NP_000290.2 246 TIPKAVQYLSSQD----EKYQAIGAYYIQHTCF---QDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS 318 (747)
10619 Q Consensus 246 iL~~Ll~lL~ssd----~eVr~sAL~aLsnLs~---~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~ 318 (747)
10620 +++.+..++...+ ..++..++.++.++.. ........+...++++.+..++...++.++..++.++.+++...
10621 T Consensus 210 ~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~ 289 (339)
10622 T 5Z8H_A 210 ALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARN 289 (339)
10623 T ss_pred hHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccCHHHHHHHHHCCHHHHHHHHHhCCCHHHHHHHHHHHHHHhCCC
10624 Confidence 4445555554332 5677778888887752 22223333334467777788787777788889999999988744
10625
10626
10627 Q NP_000290.2 319 TTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD 361 (747)
10628 Q Consensus 319 ~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~ 361 (747)
10629 +.....+...++++.+..++. ..++.++..++.++.+++...
10630 T Consensus 290 ~~~~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~ 331 (339)
10631 T 5Z8H_A 290 PKDQEALWDMGAVSMLKNLIH-SKHKMIAMGSAAALRNLMANR 331 (339)
10632 T ss_pred HHHHHHHHHCCcHHHHHHHhh-CCCHHHHHHHHHHHHHHHcCC
10633 Confidence 443344444567788888886 556778888999998888643
10634
10635
10636 No 206
10637 >5WBK_A Regulatory-associated protein of TOR 1,Ribosomal; Raptor, TOS, PROTEIN BINDING; 3.11A {Arabidopsis thaliana}
10638 Probab=95.72 E-value=9.2e-05 Score=89.00 Aligned_cols=168 Identities=12% Similarity=0.072 Sum_probs=120.7 Template_Neff=8.700
10639
10640 Q NP_000290.2 541 GWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG--NSDVVRSGASL 618 (747)
10641 Q Consensus 541 ~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~--d~eVr~~AL~a 618 (747)
10642 ..+...|+++.|+++|. +..++++..++.++.+++..++. .+..+.+.+++..|+.+|... .+.++..++.+
10643 T Consensus 500 ~~~l~~Gi~p~ll~lL~-s~~~~lr~~a~~i~a~i~~~d~~-----~q~~l~~~~~l~~ll~~L~~~~~~~~~r~~a~~~ 573 (1287)
10644 T 5WBK_A 500 DLALSVGIFPYVLKLLQ-TTTNELRQILVFIWTKILALDKS-----CQIDLVKDGGHTYFIRFLDSSGAFPEQRAMAAFV 573 (1287)
10645 T ss_dssp HHHHHHTCHHHHHHGGG-CCCHHHHHHHHHHHHHHHHHCGG-----GHHHHHHTTTHHHHHHHHHSSCCCHHHHHHHHHH
10646 T ss_pred HHHHHCCcHHHHHHHHc-CCCHHHHHHHHHHHHHHHccCHH-----HHHHHHHcCCeeeEEEeecCCCCCHHHHHHHHHH
10647 Confidence 33457789999999998 46778899999999999876443 344456677888899988743 35567788899
10648
10649
10650 Q NP_000290.2 619 LSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTG-NTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS 695 (747)
10651 Q Consensus 619 LsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~-~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~ 695 (747)
10652 |+.++.. ... ..+...+++..+...|..... ....++.++..++.+|+.|+...+.........+++..|+.+|.+.
10653 T Consensus 574 Ls~l~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~~lr~~a~~~L~~L~~~~~~~~~~~~~~~~~~~L~~lL~~~ 653 (1287)
10654 T 5WBK_A 574 LAVIVDGHRRGQEACLEANLIGVCLGHLEASRPSDPQPEPLFLQWLCLCLGKLWEDFMEAQIMGREANAFEKLAPLLSEP 653 (1287)
10655 T ss_dssp HHHHHTTCHHHHHHHHHTTHHHHHHHHCC---------CHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHGGGGGCS
10656 T ss_pred HHHHHcCCHhHHHHHHHCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHCCHHHHHHHHhcCC
10657 Confidence 9999876 222 233444677777777761000 0003678899999999999876555555556667788899999877
10658
10659
10660 Q NP_000290.2 696 ASPKAAEAARLLLSDMWSSK 715 (747)
10661 Q Consensus 696 ~d~eVr~aAL~aLsnL~~~~ 715 (747)
10662 ++.+|.+++.+|+.++...
10663 T Consensus 654 -~~~VRaaal~AL~~li~~~ 672 (1287)
10664 T 5WBK_A 654 -QPEVRAAAVFALGTLLDIG 672 (1287)
10665 T ss_dssp -CHHHHHHHHHHHHHHCC--
10666 T ss_pred -CHHHHHHHHHHHHHHHhcC
10667 Confidence 8899999999999998764
10668
10669
10670 No 207
10671 >6SA6_A DARPin-Armadillo fusion A5; protein fusion, DARPin, Armadillo, shared; HET: EDO; 1.6A {synthetic construct}
10672 Probab=95.69 E-value=8.4e-05 Score=73.16 Aligned_cols=135 Identities=25% Similarity=0.260 Sum_probs=92.1 Template_Neff=12.400
10673
10674 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
10675 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
10676 .+++.+..++.+.++.++..++.+|.+++.........+...++++.+..++...++.++..++.+|..++.........
10677 T Consensus 241 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 320 (397)
10678 T 6SA6_A 241 GALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQA 320 (397)
10679 T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHH
10680 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCcHHHHHHHHhCChHHHHHHHhcCCcHHHHHHHHHHHHHHhcCcHHHHHH
10681 Confidence 34566666777777888889999999987654333333444467777888887777788888899998887654433333
10682
10683
10684 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVI 380 (747)
10685 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~ 380 (747)
10686 +...++++.+..++. ..++.++..++.++..++.. ......+.. ++++.|..++.
10687 T Consensus 321 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 377 (397)
10688 T 6SA6_A 321 VIDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQKQAVKEAGALEKLEQLQS 377 (397)
10689 T ss_dssp HHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT
10690 T ss_pred HHhcChHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCchHHHHHHHh
10691 Confidence 444567777888776 55678888899999998874 333333333 67777777664
10692
10693
10694 No 208
10695 >2W3C_A GENERAL VESICULAR TRANSPORT FACTOR P115; MEMBRANE VESICLE TETHERING, ARMADILLO FOLD; HET: PEG; 2.22A {HOMO SAPIENS}
10696 Probab=95.59 E-value=0.00012 Score=79.14 Aligned_cols=136 Identities=15% Similarity=0.146 Sum_probs=91.0 Template_Neff=10.400
10697
10698 Q NP_000290.2 246 TIPKAVQYLSSQ--DEKYQAIGAYYIQHTCFQDES-----------------AKQQVY-QLGGICKLVDLLRSPNQNVQQ 305 (747)
10699 Q Consensus 246 iL~~Ll~lL~ss--d~eVr~sAL~aLsnLs~~~~~-----------------~~~~li-~~~IL~~Ll~lL~s~d~eVr~ 305 (747)
10700 .++.++..+.+. +..+...++.+|..++..... ....+. ..+.++.++.++.+.+..++.
10701 T Consensus 9 ~l~~Li~~L~~~~~~~~~~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~ 88 (577)
10702 T 2W3C_A 9 AMEHLIHVLQTDRSDSEIIGYALDTLYNIISNEEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRW 88 (577)
10703 T ss_dssp TTHHHHHHHHHCTTCHHHHHHHHHHHHHHHHC------------------CHHHHHHHHSTHHHHHHHHHTTCCCHHHHH
10704 T ss_pred hHHHHHHHHhhCCCcHHHHHHHHHHHHHHhCCCchhhhhhccccccHHHHHHHHHHHHhcCchHHHHHHHccCCCHHHHH
10705 Confidence 345566666543 456778888888888765431 122233 456777788888777788899
10706
10707
10708 Q NP_000290.2 306 AAAGALRNLVFRST-TNKLETR-RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVII 381 (747)
10709 Q Consensus 306 ~AL~aLs~La~~~~-~~~~~ll-~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~ 381 (747)
10710 .++.+|..++...+ .....+. ..+.++.++.++. ..+..++..++.+|.+++... .....+.. ++++.|+.++..
10711 T Consensus 89 ~a~~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~~~~L~~ll~~ 167 (577)
10712 T 2W3C_A 89 PGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA-DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISE 167 (577)
10713 T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGG-CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHH
10714 T ss_pred HHHHHHHHHHHhchHHHHHHHHhCCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHcCCHHHHHHHHHHH
10715 Confidence 99999999886543 2222333 2467888888886 556788999999999998743 33333333 889999988875
10716
10717
10718 Q NP_000290.2 382 P 382 (747)
10719 Q Consensus 382 ~ 382 (747)
10720 .
10721 T Consensus 168 ~ 168 (577)
10722 T 2W3C_A 168 E 168 (577)
10723 T ss_dssp T
10724 T ss_pred h
10725 Confidence 3
10726
10727
10728 No 209
10729 >6CRI_I Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
10730 Probab=95.58 E-value=0.0001 Score=74.75 Aligned_cols=106 Identities=11% Similarity=0.025 Sum_probs=69.8 Template_Neff=13.200
10731
10732 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
10733 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
10734 ..+++.+...+.+.+..++..++.++..+.... ....+++.+...+.+.++.++..++.++..+.........
10735 T Consensus 72 ~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~-------~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~~~~~ 144 (570)
10736 T 6CRI_I 72 IMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDK-------ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVE 144 (570)
10737 T ss_dssp GTTHHHHHHHTSSSCHHHHHHHHHHHHHCCCTT-------TTTTSHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCHHHHH
10738 T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHccCChhH-------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhChhhhh
10739 Confidence 344555666666677778888888887775321 1123556666667777788888899988888754332211
10740
10741
10742 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
10743 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
10744 ...+++.+...+. +.++.++..++.++..+...
10745 T Consensus 145 ---~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~ 177 (570)
10746 T 6CRI_I 145 ---DQGFLDTLKDLIS-DSNPMVVANAVAALSEIAES 177 (570)
10747 T ss_dssp ---HHTHHHHHHHHHT-SSSHHHHHHHHHHHHHHHHH
10748 T ss_pred ---ccchHHHHHHHhc-CCCHHHHHHHHHHHHHHHhh
10749 Confidence 1345666677776 56778888899888888764
10750
10751
10752 No 210
10753 >1QBK_B STRUCTURE OF THE KARYOPHERIN BETA2-RAN; HEAT REPEATS, NUCLEAR TRANSPORT PROTEIN; HET: GNP; 3.0A {Homo sapiens} SCOP: a.118.1.1
10754 Probab=95.57 E-value=0.00011 Score=79.31 Aligned_cols=157 Identities=12% Similarity=0.081 Sum_probs=97.3 Template_Neff=13.200
10755
10756 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
10757 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
10758 ..++.+...+. +.++.++..++.+|..++...+. ....+ -..+++.+...+.+.+..++..++.++..++...
10759 T Consensus 667 ~~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~ 739 (890)
10760 T 1QBK_B 667 NILTLMYQCMQ-DKMPEVRQSSFALLGDLTKACFQ-----HVKPC-IADFMPILGTNLNPEFISVCNNATWAIGEISIQM 739 (890)
10761 T ss_pred hHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHhHH-----hHHHH-HHHHHHHHHhhcCcccHHHHHHHHHHHHHHHHHc
10762 Confidence 35566666666 36778888899999988764321 11111 1346667777777777889999999999988652
10763
10764
10765 Q NP_000290.2 627 -LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
10766 Q Consensus 627 -e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
10767 .........+++.+...+.+. ..+..++..++.+|+.++...+....... ..++..++..+....++.++..++
10768 T Consensus 740 ~~~~~~~~~~i~~~l~~~l~~~----~~~~~~r~~a~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~ 814 (890)
10769 T 1QBK_B 740 GIEMQPYIPMVLHQLVEIINRP----NTPKTLLENTAITIGRLGYVCPQEVAPML-QQFIRPWCTSLRNIRDNEEKDSAF 814 (890)
10770 T ss_pred CccccchHHHHHHHHHHHHcCC----CCCccHHHHHHHHHHHHHhhCHHhHHHHH-HHhHHHHHHHHhcCCChHHHHHHH
10771 Confidence 211112234566677766541 01567888999999998875332211111 234555666555432567788888
10772
10773
10774 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
10775 Q Consensus 706 ~aLsnL~~~~ 715 (747)
10776 .+|..+....
10777 T Consensus 815 ~~l~~l~~~~ 824 (890)
10778 T 1QBK_B 815 RGICTMISVN 824 (890)
10779 T ss_pred HHHHHHHhhC
10780 Confidence 8888776543
10781
10782
10783 No 211
10784 >4P6Z_G BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
10785 Probab=95.56 E-value=0.00012 Score=77.66 Aligned_cols=151 Identities=10% Similarity=0.027 Sum_probs=89.9 Template_Neff=12.000
10786
10787 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ---SGNSDVVRSGASLLSNMS 623 (747)
10788 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~---s~d~eVr~~AL~aLsnLa 623 (747)
10789 ..++.|+.++. +.++.++..++.+|..+....+. ....+++.+...+. ..+..++ .++++|+.+.
10790 T Consensus 431 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~~~~l~~~l~~~~~~~~~~r-~a~~~l~~~~ 498 (627)
10791 T 4P6Z_G 431 WHIDTIMRVLT-TAGSYVRDDAVPNLIQLITNSVE----------MHAYTVQRLYKAILGDYSQQPLVQ-VAAWCIGEYG 498 (627)
10792 T ss_dssp HHHHHHHHHHH-HTGGGSCGGGHHHHHHHHHSCTT----------TTHHHHHHHHHHHHHCCCSHHHHH-HHHHHHHHTH
10793 T ss_pred HHHHHHHHHHH-hhccccCcchHHHHHHHHhcCch----------HHHHHHHHHHHHHHcCCCCHHHHH-HHHHHHHHHH
10794 Confidence 35566666665 35566677777777776643211 01234455555553 2334555 7778887776
10795
10796
10797 Q NP_000290.2 624 RHPLL-H-------RVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR 693 (747)
10798 Q Consensus 624 ~~~e~-~-------~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~ 693 (747)
10799 ..... . ......+++.|..++ .+ .++.++..++.+|..+....+. ....++..|..++.
10800 T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~------~~~~vr~~a~~~L~~l~~~~~~-----~~~~~~~~l~~~~~ 567 (627)
10801 T 4P6Z_G 499 DLLVSGQCEEEEPIQVTEDEVLDILESVLISNM------STSVTRGYALTAIMKLSTRFTC-----TVNRIKKVVSIYGS 567 (627)
10802 T ss_dssp HHHHSCCCTTSCCCCCCSHHHHHHHHHHHHCTT------CCHHHHHHHHHHHHHHHHHCCS-----CHHHHHHHHHHGGG
10803 T ss_pred HHhccCCCCCCCCCCCCHHHHHHHHHHHHcccC------CCHHHHHHHHHHHHHHHhhccc-----hHHHHHHHHHHHcc
10804 Confidence 54111 0 011124566666666 33 3567889999999998865332 22234566666666
10805
10806
10807 Q NP_000290.2 694 SSASPKAAEAARLLLSDMWSSKELQGVL 721 (747)
10808 Q Consensus 694 s~~d~eVr~aAL~aLsnL~~~~~~~~~~ 721 (747)
10809 +. +..++..++.++..+..+......|
10810 T Consensus 568 ~~-~~~vr~~a~~~l~~l~~~~~~~~~l 594 (627)
10811 T 4P6Z_G 568 SI-DVELQQRAVEYNALFKKYDHMRSAL 594 (627)
10812 T ss_dssp CS-CHHHHHHHHHHHHHHHHCTTHHHHH
10813 T ss_pred CC-CHHHHHHHHHHHHHhhhHHHHHHHH
10814 Confidence 65 7889999999999988764444443
10815
10816
10817 No 212
10818 >5MFI_B YIII(Dq.V2)4CqI, (KR)4; Designed armadillo repeat protein, peptide; 1.45A {synthetic construct}
10819 Probab=95.46 E-value=0.00014 Score=65.05 Aligned_cols=112 Identities=20% Similarity=0.227 Sum_probs=75.6 Template_Neff=13.000
10820
10821 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
10822 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
10823 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
10824 T Consensus 131 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 210 (243)
10825 T 5MFI_B 131 ALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 210 (243)
10826 T ss_dssp CHHHHHHTTTSSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSCHHHHHHH
10827 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
10828 Confidence 45556666666667788888889888876544333333444577778888877778888899999998886444333333
10829
10830
10831 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
10832 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
10833 ...++++.+..++. ..++.++..++.++..++
10834 T Consensus 211 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 242 (243)
10835 T 5MFI_B 211 EEAGAEPALEKLQS-SPNEEVQKNAQAALEALN 242 (243)
10836 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHC
10837 T ss_pred HHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHhc
10838 Confidence 33456667777775 456677777777777654
10839
10840
10841 No 213
10842 >5MFJ_B YIII(Dq.V2)4CqI, (KR)5; Designed armadillo repeat protein, peptide; 1.53A {synthetic construct}
10843 Probab=95.46 E-value=0.00014 Score=65.05 Aligned_cols=112 Identities=20% Similarity=0.227 Sum_probs=75.6 Template_Neff=13.000
10844
10845 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
10846 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
10847 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
10848 T Consensus 131 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 210 (243)
10849 T 5MFJ_B 131 ALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 210 (243)
10850 T ss_dssp CHHHHHHTTTSSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSCHHHHHHH
10851 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
10852 Confidence 45556666666667788888889888876544333333444577778888877778888899999998886444333333
10853
10854
10855 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
10856 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
10857 ...++++.+..++. ..++.++..++.++..++
10858 T Consensus 211 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 242 (243)
10859 T 5MFJ_B 211 EEAGAEPALEKLQS-SPNEEVQKNAQAALEALN 242 (243)
10860 T ss_dssp HHTTHHHHHHHTSS-CSCHHHHHHHHHHHHHHC
10861 T ss_pred HHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHhc
10862 Confidence 33456667777775 456677777777777654
10863
10864
10865 No 214
10866 >5EWP_B Uncharacterized protein; translocation and attachment of rhoptries; 1.8A {Plasmodium falciparum Santa Lucia}
10867 Probab=95.43 E-value=0.00015 Score=67.32 Aligned_cols=134 Identities=16% Similarity=0.127 Sum_probs=89.1 Template_Neff=11.800
10868
10869 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
10870 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
10871 +++.+..++...+..++..++.++.+++.........+...+.++.++.++...+..++..++.++.+++.........+
10872 T Consensus 87 ~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 166 (252)
10873 T 5EWP_B 87 GIAVFINLLKSHELDRVHAAVVALSFLSVDNVKNCICMFESGALPYLISGMKSNIDGMKAACAQTCRNIFVLDKKYKKEF 166 (252)
10874 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHH
10875 T ss_pred cHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHhhCCCHHHHHHHHHHHHHHHhcCHHHHHHH
10876 Confidence 45556666666667788889999999887544444445555677888888877677888999999999876533333344
10877
10878
10879 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNA-------EIQKQLTGLLWNLSSTDEL-----KEELIA-DALPVLADRVI 380 (747)
10880 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~-------eVr~~AL~aLsnLas~~~~-----~~~Lve-giLe~Lv~LL~ 380 (747)
10881 ...+.++.+..++. .... .++..++.++..++..... ...+.. ++++.|..++.
10882 T Consensus 167 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~L~~~l~ 233 (252)
10883 T 5EWP_B 167 LKLGGITQLVNLLE-LPSNYDDSQPLYTQLEAIYHLEDFILNDGDEIPEFLEAVKNSNSIKNLKTLQQ 233 (252)
10884 T ss_dssp HHTTHHHHHHHTTS-CCTTCCSCSCCHHHHHHHHHHHHHHEETTEECHHHHHHHHTTTHHHHHHHHTT
10885 T ss_pred HHCChHHHHHHHhc-CCCCCCCCchHHHHHHHHHHHHHHHhcCCCccHHHHHHHHhCChHHHHHHHhh
10886 Confidence 44567777777775 3333 2777788888888764331 223333 66777777663
10887
10888
10889 No 215
10890 >4V3Q_A YIII_M4_AII; DE NOVO PROTEIN, PROTEIN ENGINEERING; HET: GOL, CA; 1.8A {SYNTHETIC CONSTRUCT}
10891 Probab=95.36 E-value=0.00017 Score=64.82 Aligned_cols=134 Identities=25% Similarity=0.303 Sum_probs=88.0 Template_Neff=12.900
10892
10893 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
10894 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
10895 +++.+...+.+.+..++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++.........+
10896 T Consensus 51 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 130 (247)
10897 T 4V3Q_A 51 ALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAV 130 (247)
10898 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
10899 T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
10900 Confidence 45556666766677888889999998876544333334445677788888877778888889999988875443333333
10901
10902
10903 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
10904 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
10905 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
10906 T Consensus 131 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 186 (247)
10907 T 4V3Q_A 131 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLS 186 (247)
10908 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
10909 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhc
10910 Confidence 34466777777776 4566778888888888876432 2222222 55666665554
10911
10912
10913 No 216
10914 >3GQ2_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.18A {Bos taurus}
10915 Probab=95.28 E-value=0.00022 Score=78.31 Aligned_cols=135 Identities=13% Similarity=0.116 Sum_probs=92.0 Template_Neff=10.100
10916
10917 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQ-QVY-QLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
10918 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~-~li-~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
10919 .++.++.++...+..++..++.+|..++...+.... .+. ..+.++.++.++.+.+..++..++.+|..++........
10920 T Consensus 123 ~i~~Ll~ll~~~~~~~~~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~~~~~~i~~~a~~~L~~l~~~~~~~~~ 202 (651)
10921 T 3GQ2_A 123 NVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQK 202 (651)
10922 T ss_dssp HHHTHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHGGGGGCSSHHHHHHHHHHHHHHHTTCHHHHH
10923 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHH
10924 Confidence 455566666666778889999999998865432221 222 345778888888877778889999999999874444434
10925
10926
10927 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGN----AEIQKQLTGLLWNLSSTDELKEE-LIA-DALPVLADRVII 381 (747)
10928 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d----~eVr~~AL~aLsnLas~~~~~~~-Lve-giLe~Lv~LL~~ 381 (747)
10929 .+...+.++.++.++. ... ..++..++.+|.+++........ +.+ ++++.|+.+|..
10930 T Consensus 203 ~l~~~g~~~~L~~ll~-~~~~~~~~~v~~~al~~L~~L~~~~~~~~~~~~e~~~i~~L~~lL~~ 265 (651)
10931 T 3GQ2_A 203 IVAFENAFERLLDIIT-EEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEV 265 (651)
10932 T ss_dssp HHHHTTHHHHHHHHHH-HTTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGTGGGGCC
10933 T ss_pred HHHhCChHHHHHHHHH-HhCCCCccHHHHHHHHHHHHHHhCCHHHHHHHHhcChHHHHHHHHhc
10934 Confidence 4445577888888876 322 25777888899998875433333 334 788888888864
10935
10936
10937 No 217
10938 >3GRL_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.0A {Bos taurus}
10939 Probab=95.28 E-value=0.00022 Score=78.31 Aligned_cols=135 Identities=13% Similarity=0.116 Sum_probs=92.0 Template_Neff=10.100
10940
10941 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQ-QVY-QLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
10942 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~-~li-~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
10943 .++.++.++...+..++..++.+|..++...+.... .+. ..+.++.++.++.+.+..++..++.+|..++........
10944 T Consensus 123 ~i~~Ll~ll~~~~~~~~~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~~~~~~i~~~a~~~L~~l~~~~~~~~~ 202 (651)
10945 T 3GRL_A 123 NVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQK 202 (651)
10946 T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHH
10947 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHH
10948 Confidence 455566666666778889999999998865432221 222 345778888888877778889999999999874444434
10949
10950
10951 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGN----AEIQKQLTGLLWNLSSTDELKEE-LIA-DALPVLADRVII 381 (747)
10952 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d----~eVr~~AL~aLsnLas~~~~~~~-Lve-giLe~Lv~LL~~ 381 (747)
10953 .+...+.++.++.++. ... ..++..++.+|.+++........ +.+ ++++.|+.+|..
10954 T Consensus 203 ~l~~~g~~~~L~~ll~-~~~~~~~~~v~~~al~~L~~L~~~~~~~~~~~~e~~~i~~L~~lL~~ 265 (651)
10955 T 3GRL_A 203 IVAFENAFERLLDIIT-EEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEV 265 (651)
10956 T ss_dssp HHHHTTHHHHHHHHHH-HHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGGCC
10957 T ss_pred HHHhCChHHHHHHHHH-HhCCCCccHHHHHHHHHHHHHHhCCHHHHHHHHhcChHHHHHHHHhc
10958 Confidence 4445577888888876 322 25777888899998875433333 334 788888888864
10959
10960
10961 No 218
10962 >5AFF_A SYMPORTIN 1, RIBOSOMAL PROTEIN L5; CHAPERONE, RIBOSOME BIOGENESIS, ALPHA SOLENOID.; 3.398A {CHAETOMIUM THERMOPHILUM}
10963 Probab=95.22 E-value=0.00026 Score=78.85 Aligned_cols=94 Identities=14% Similarity=0.083 Sum_probs=66.2 Template_Neff=8.800
10964
10965 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLV-DLLRSPNQNVQQAAAGALRNLVFRS-TTNK 322 (747)
10966 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll-~lL~s~d~eVr~~AL~aLs~La~~~-~~~~ 322 (747)
10967 ..++.|+..+.+.++..+..++.+|.+++.. +.....+...++++.|+ .++.+.+..++..++.+|.+++... ....
10968 T Consensus 12 ~~i~~Li~~L~s~~~~~r~~A~~aL~~L~~d-~~~r~~ll~~g~v~~Li~~lL~d~~~~v~~~a~~aLrnLs~~~~~~~~ 90 (654)
10969 T 5AFF_A 12 DKILPVLKDLKSPDAKSRTTAAGAIANIVQD-AKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFC 90 (654)
10970 T ss_dssp HHHHHHHHHHHSSCTTHHHHHHHHHHHHHCC-HHHHHHHHHTTHHHHHHHTGGGCSSHHHHHHHHHHHHHHHHHSCHHHH
10971 T ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHcC-HHHHHHHHHCChHHHHHHHHccCCCHHHHHHHHHHHHHHhccCchhHH
10972 Confidence 3456677777777888899999999998754 44444555567888887 7787777889999999999997643 2222
10973
10974
10975 Q NP_000290.2 323 LETRRQNGIREAVSLLR 339 (747)
10976 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ 339 (747)
10977 ..++..+++..|..++.
10978 T Consensus 91 ~~l~~~~il~~L~~lL~ 107 (654)
10979 T 5AFF_A 91 VHLYRLDVLTAIEHAAK 107 (654)
10980 T ss_dssp HHHHHTTHHHHHHHHHH
10981 T ss_pred HHHHHCChHHHHHHHHH
10982 Confidence 33444566666666654
10983
10984
10985 No 219
10986 >6QH5_B AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
10987 Probab=95.19 E-value=0.00023 Score=72.97 Aligned_cols=107 Identities=12% Similarity=0.043 Sum_probs=72.0 Template_Neff=12.900
10988
10989 Q NP_000290.2 243 SGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNK 322 (747)
10990 Q Consensus 243 ~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
10991 ...+++.+...+.+.++.++..++.++..+.... ....+++.+...+.+.++.++..++.++..+....+...
10992 T Consensus 84 ~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~-------~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~ 156 (592)
10993 T 6QH5_B 84 AIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDK-------ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156 (592)
10994 T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHcchh-------hHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCchhh
10995 Confidence 4445666666777777888888888888775421 112355666666777778889999999888875433211
10996
10997
10998 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
10999 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
11000 ....+++.+...+. +.++.++..++.++..+...
11001 T Consensus 157 ---~~~~~~~~l~~~l~-d~~~~vr~~a~~~l~~~~~~ 190 (592)
11002 T 6QH5_B 157 ---EDQGFLDSLRDLIA-DSNPMVVANAVAALSEISES 190 (592)
11003 T ss_pred ---cCccHHHHHHHHhC-CCCHHHHHHHHHHHHHHHhc
11004 Confidence 11245666666675 55678888899988888764
11005
11006
11007 No 220
11008 >3C2G_A Sys-1 protein, Pop-1 8-residue peptide; beta-catenin, phylogeny, SYS-1, POP-1, Caenorhabditis; HET: MSE; 2.5A {Caenorhabditis elegans}
11009 Probab=95.17 E-value=0.00033 Score=77.69 Aligned_cols=189 Identities=17% Similarity=0.156 Sum_probs=108.5 Template_Neff=5.600
11010
11011 Q NP_000290.2 260 KYQAIGAYYIQHTCFQDESAKQQVYQL-GG----------ICKLVDLLRSP----------------N----QNVQQAAA 308 (747)
11012 Q Consensus 260 eVr~sAL~aLsnLs~~~~~~~~~li~~-~I----------L~~Ll~lL~s~----------------d----~eVr~~AL 308 (747)
11013 .+...++.++..++..+......+... +. +..|+.++... + +.+...+.
11014 T Consensus 185 ~~~~~i~d~Lr~L~~~n~~~K~~~l~~~g~~~~~~~~~~~I~~Ll~IL~~~~~~~~~~~~e~~~~~~~~~~~e~ll~~t~ 264 (619)
11015 T 3C2G_A 185 MINPAIFIIFRFIISKDTRLKDYFIWNNNPHDQPPPPTGLIIKLNAVMIGSYRLIAGQNPETLPQNPELAHLIQVIIRTF 264 (619)
11016 T ss_dssp GCCTHHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCCTTSHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHH
11017 T ss_pred chHHHHHHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCchHHHHHHHHHHHhHhhhcCCCcccCCCCccHHHHHHHHHHHH
11018 Confidence 344556667777766544443333332 23 56676666531 1 44555666
11019
11020
11021 Q NP_000290.2 309 GALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCD 388 (747)
11022 Q Consensus 309 ~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~ 388 (747)
11023 .+|..+. ........+...+.++.|...+. ..++.+...++++|.++.........-+++.+..++.+|..
11024 T Consensus 265 ~lLk~Ls-~~sn~a~~~V~~gGvq~L~~~L~-~~S~rlv~~~L~~LrnlSDa~~~~~~~l~~ll~~lv~ll~~------- 335 (619)
11025 T 3C2G_A 265 DLLGLLL-HDSDAIDGFVRSDGVGAITTVVQ-YPNNDLIRAGCKLLLQVSDAKALAKTPLENILPFLLRLIEI------- 335 (619)
11026 T ss_dssp HHHHHHC-CSHHHHHHHHHTTHHHHHHHHTT-SSCHHHHHHHHHHHHHHTTCGGGGTSCCTTHHHHHHHHHHH-------
11027 T ss_pred HHHHHHh-CCcchHHHHHHCCHHHHHHHHcc-CCCHHHHHHHHHHHHHHHchHHHcCCchHHHHHHHHHHHhc-------
11028 Confidence 7777666 33333345666788888888886 67788999999999999865432212223566667776621
11029
11030
11031 Q NP_000290.2 389 GNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAA---- 464 (747)
11032 Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 464 (747)
11033 .-|+.+..-+||+|..-. ....--+.+---.|-|+.|+.-+..+...
11034 T Consensus 336 --------~~D~~iv~~~tG~LsNlt---------------------~nn~~NK~~~i~~ggi~~Li~~i~~~~~~~~~~ 386 (619)
11035 T 3C2G_A 336 --------HPDDEVIYSGTGFLSNVV---------------------AHKQHVKDIAIRSNAIFLLHTIISKYPRLDELT 386 (619)
11036 T ss_dssp --------CCCHHHHHHHHHHHHHHS---------------------TTCHHHHHHHHHTTHHHHHHHHHHTSCCGGGCC
11037 T ss_pred --------CCCHHHHHHHHHHHHHHH---------------------cCChhHHHHHHhCCHHHHHHHHHHhCCccccCC
11038 Confidence 237888888898875311 11111111111234445555444333210
11039
11040
11041 Q NP_000290.2 465 ----SRCDDKSVENCMCVLHNLSYRL 486 (747)
11042 Q Consensus 465 ----~~~~~~~~~~~~~~~~~~~~~~ 486 (747)
11043 -+-...-.|||.|.|+||..+-
11044 T Consensus 387 ~~~~~~~~eeI~e~~l~aLr~Lt~~h 412 (619)
11045 T 3C2G_A 387 DAPKRNRVCEIICNCLRTLNNFLMMW 412 (619)
11046 T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHGGG
11047 T ss_pred CCchhhhhHHHHHHHHHHHHHHhccC
11048 Confidence 0011345899999999998874
11049
11050
11051 No 221
11052 >4FDD_A Transportin-1, RNA-binding protein FUS; HEAT repeats, Karyopherin, nuclear import; 2.3A {Homo sapiens}
11053 Probab=95.09 E-value=0.00028 Score=75.31 Aligned_cols=157 Identities=12% Similarity=0.083 Sum_probs=93.3 Template_Neff=13.300
11054
11055 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
11056 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
11057 ..++.+...+. +.++.++..++.++..++...+. ..... -..+++.+...+.+.+..++..++.++..++..
11058 T Consensus 629 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~ 701 (852)
11059 T 4FDD_A 629 NILTLMYQCMQ-DKMPEVRQSSFALLGDLTKACFQ-----HVKPC-IADFMPILGTNLNPEFISVCNNATWAIGEISIQM 701 (852)
11060 T ss_dssp CHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHCGG-----GTGGG-HHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHH
11061 T ss_pred hHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHH-----hHHHH-HHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHc
11062 Confidence 35566666666 35677888899999988764321 11111 134666677777777788888999999888765
11063
11064
11065 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
11066 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
11067 ..........+++.+...+... ..+..++..++.+|..+....+....... ..++..++..+....+..++..++
11068 T Consensus 702 ~~~~~~~~~~i~~~l~~~l~~~----~~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~a~ 776 (852)
11069 T 4FDD_A 702 GIEMQPYIPMVLHQLVEIINRP----NTPKTLLENTAITIGRLGYVCPQEVAPML-QQFIRPWCTSLRNIRDNEEKDSAF 776 (852)
11070 T ss_dssp GGGGGGGTHHHHHHHHHHHTCS----SCCHHHHHHHHHHHHHHHHHCHHHHGGGH-HHHHHHHHHHHHTSCSSHHHHHHH
11071 T ss_pred CccchhhHHHHHHHHHHHHcCC----CCChhHHHHHHHHHHHHHHHCHHHhHHHH-HHhHHHHHHHhhcCCCHHHHHHHH
11072 Confidence 2111111123556666666541 01467788888999888765332111111 124445555554322567788888
11073
11074
11075 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
11076 Q Consensus 706 ~aLsnL~~~~ 715 (747)
11077 .+|..++...
11078 T Consensus 777 ~~l~~l~~~~ 786 (852)
11079 T 4FDD_A 777 RGICTMISVN 786 (852)
11080 T ss_dssp HHHHHHHHHC
11081 T ss_pred HHHHHHHhhC
11082 Confidence 8887776543
11083
11084
11085 No 222
11086 >4P6Z_B BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
11087 Probab=95.03 E-value=0.00031 Score=72.53 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=69.9 Template_Neff=12.700
11088
11089 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
11090 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
11091 ..+++.+...+.+.++.++..++.++..+.... ....+++.+...+.+.++.++..++.++..+....+...
11092 T Consensus 101 ~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~-------~~~~~~~~l~~~l~~~~~~vr~~a~~~L~~l~~~~~~~~- 172 (600)
11093 T 4P6Z_B 101 IMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDK-------ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV- 172 (600)
11094 T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHhcCCchH-------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhChHHh-
11095 Confidence 344555566666667788888888887775321 112455666666777778888889998888875433211
11096
11097
11098 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
11099 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
11100 ....+++.+...+. +.++.++..++.++..+...
11101 T Consensus 173 --~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 206 (600)
11102 T 4P6Z_B 173 --EDQGFLDTLKDLIS-DSNPMVVANAVAALSEIAES 206 (600)
11103 T ss_pred --hccChHHHHHHHhc-CCCHHHHHHHHHHHHHHHhh
11104 Confidence 11345666777775 55678888888888888764
11105
11106
11107 No 223
11108 >2JKT_A AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ALTERNATIVE SPLICING, PHOSPHOPROTEIN, PHOSPHORYLATION, PROTEIN; HET: SEP, SO4; 3.4A {MUS MUSCULUS}
11109 Probab=95.01 E-value=0.00032 Score=73.46 Aligned_cols=144 Identities=13% Similarity=0.048 Sum_probs=89.0 Template_Neff=12.300
11110
11111 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSD--VVRSGASLLSNMSR 624 (747)
11112 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~e--Vr~~AL~aLsnLa~ 624 (747)
11113 ..++.|+.++. +.+..++..++.++..+...... ....+++.|...+.+.+.. ++..++++|+.+..
11114 T Consensus 441 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~~~~l~~~l~~~~~~~~v~~~a~~~l~~~~~ 509 (623)
11115 T 2JKT_A 441 WYVDTILNLIR-IAGDYVSEEVWYRVIQIVINRDD----------VQGYAAKTVFEALQAPACHENLVKVGGYILGEFGN 509 (623)
11116 T ss_dssp HHHHHHHHHTT-TTGGGCCHHHHHHHHHHHHHCST----------THHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHSST
11117 T ss_pred HHHHHHHHHHH-HHcccCCHHHHHHHHHHHhcChh----------HHHHHHHHHHHHHhCccCCHHHHHHHHHHHHHHHH
11118 Confidence 35666777776 35566777788888777653211 1234566666666655544 78888888888775
11119
11120
11121 Q NP_000290.2 625 HPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC---RSSASPKA 700 (747)
11122 Q Consensus 625 ~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL---~s~~d~eV 700 (747)
11123 .... .......+++.|...+.+ .+..++..++.+|..++...+. . ...+..++..+ .+. ++.+
11124 T Consensus 510 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~al~~l~~~~~~-----~-~~~l~~ll~~l~~~~~~-~~~v 576 (623)
11125 T 2JKT_A 510 LIAGDPRSSPLIQFNLLHSKFHL------CSVPTRALLLSTYIKFVNLFPE-----V-KATIQDVLRSDSQLKNA-DVEL 576 (623)
11126 T ss_dssp TSSSSGGGCHHHHHHHHHHHHTT------SCHHHHHHHHHHHHHHHHHCTT-----T-HHHHHTTSSSHHHHTCS-SHHH
11127 T ss_pred HhcCCCCCChHHHHHHHHHhcCC------CCHHHHHHHHHHHHHHHHhCHH-----H-HHHHHHHHHhccccCCC-CHHH
11128 Confidence 4111 111111355566666655 3577889999999998864332 1 13455555555 444 7788
11129
11130
11131 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
11132 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
11133 +..++.++..+...
11134 T Consensus 577 r~~a~~~l~~~~~~ 590 (623)
11135 T 2JKT_A 577 QQRAVEYLRLSTVA 590 (623)
11136 T ss_dssp HHHHHHHHHHHHSS
11137 T ss_pred HHHHHHHHHHhccC
11138 Confidence 99999998877654
11139
11140
11141 No 224
11142 >5IZ8_A Adenomatous polyposis coli protein, ACE-ALA-GLY-GLU-ALA-LEU-ALA-ASP-NH2; APC, ASEF, Colon CANCER, Drug; HET: PGE; 3.06A {Homo sapiens}
11143 Probab=94.95 E-value=0.00036 Score=67.82 Aligned_cols=162 Identities=22% Similarity=0.254 Sum_probs=121.7 Template_Neff=12.000
11144
11145 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK-EKGLPQIARLLQSGN----SDVVRSGAS 617 (747)
11146 Q Consensus 543 lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie-~giI~~Ll~LL~s~d----~eVr~~AL~ 617 (747)
11147 +.+.++++.|+.++....++.++..++++|.+++...+. ....+.+ .++++.|+.++...+ ..++..++.
11148 T Consensus 166 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 240 (354)
11149 T 5IZ8_A 166 LREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTE-----NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGG 240 (354)
11150 T ss_dssp HHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTSCHH-----HHHHHHTSTTHHHHHHHHTTCCCTTSCCHHHHHHHH
11151 T ss_pred HHHCCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCChH-----hHHHHHhhccHHHHHHHHHhhcCCCCcHHHHHHHHH
11152 Confidence 356778888888887225677888999999999875232 2334455 688899998887533 678888999
11153
11154
11155 Q NP_000290.2 618 LLSNMSR----HPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC 692 (747)
11156 Q Consensus 618 aLsnLa~----~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL 692 (747)
11157 +|.+++. .... ..+...++++.++.++.. .++.++..++.+|.+++...+.....+.+.++++.|+.++
11158 T Consensus 241 ~L~~l~~~~~~~~~~~~~l~~~~~~~~l~~~l~~------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l 314 (354)
11159 T 5IZ8_A 241 ILRNVSSLIATNEDHRQILRENNCLQTLLQHLKS------HSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLI 314 (354)
11160 T ss_dssp HHHHHHHHHHTCHHHHHHHHTTTHHHHHHHTTTC------SCHHHHHHHHHHHHHHSSSCHHHHHHHHTTTHHHHHHHHS
11161 T ss_pred HHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhhc------CCHHHHHHHHHHHHHHHccCHHHHHHHHhCCHHHHHHHHH
11162 Confidence 9999873 2222 233455678888888876 3677899999999999985466666677778889999988
11163
11164
11165 Q NP_000290.2 693 RSSASPKAAEAARLLLSDMWSSKE 716 (747)
11166 Q Consensus 693 ~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
11167 .+. ++.++..++.+|.+++...+
11168 T Consensus 315 ~~~-~~~v~~~a~~~L~~l~~~~~ 337 (354)
11169 T 5IZ8_A 315 HSK-HKMIAMGSAAALRNLMANRP 337 (354)
11170 T ss_dssp SCS-SHHHHHHHHHHHHHHHTTCC
11171 T ss_pred hcc-CHHHHHHHHHHHHHHHccCc
11172 Confidence 866 78899999999999997764
11173
11174
11175 No 225
11176 >5IZA_A Adenomatous polyposis coli protein, ACE-GLY-GLY-GLU-ALA-LEU-ALA-TRP-NH2; APC, ASEF, Colon CANCER, Drug; 1.5A {Homo sapiens}
11177 Probab=94.95 E-value=0.00036 Score=67.81 Aligned_cols=162 Identities=22% Similarity=0.254 Sum_probs=121.8 Template_Neff=12.000
11178
11179 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK-EKGLPQIARLLQSGN----SDVVRSGAS 617 (747)
11180 Q Consensus 543 lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie-~giI~~Ll~LL~s~d----~eVr~~AL~ 617 (747)
11181 +.+.++++.|+.++....++.++..++++|.+++...+. ....+.+ .++++.|+.++...+ ..++..++.
11182 T Consensus 166 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 240 (354)
11183 T 5IZA_A 166 LREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTE-----NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGG 240 (354)
11184 T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHH-----HHHHHHTSTTHHHHHHHHTCSSCSSCCHHHHHHHHH
11185 T ss_pred HHHCCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCChH-----hHHHHHhhccHHHHHHHHHhhcCCCCcHHHHHHHHH
11186 Confidence 356778888888887225677888999999999875232 2334455 688899998887533 678888999
11187
11188
11189 Q NP_000290.2 618 LLSNMSR----HPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC 692 (747)
11190 Q Consensus 618 aLsnLa~----~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL 692 (747)
11191 +|.+++. .... ..+...++++.++.++.. .++.++..++.+|.+++...+.....+.+.++++.|+.++
11192 T Consensus 241 ~L~~l~~~~~~~~~~~~~l~~~~~~~~l~~~l~~------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l 314 (354)
11193 T 5IZA_A 241 ILRNVSSLIATNEDHRQILRENNCLQTLLQHLKS------HSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLI 314 (354)
11194 T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTT
11195 T ss_pred HHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhhc------CCHHHHHHHHHHHHHHHccCHHHHHHHHhCCHHHHHHHHH
11196 Confidence 9999873 2222 233455678888888876 3677899999999999985466666677778889999988
11197
11198
11199 Q NP_000290.2 693 RSSASPKAAEAARLLLSDMWSSKE 716 (747)
11200 Q Consensus 693 ~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
11201 .+. ++.++..++.+|.+++...+
11202 T Consensus 315 ~~~-~~~v~~~a~~~L~~l~~~~~ 337 (354)
11203 T 5IZA_A 315 HSK-HKMIAMGSAAALRNLMANRP 337 (354)
11204 T ss_dssp TCS-SHHHHHHHHHHHHHHHHTCC
11205 T ss_pred hcc-CHHHHHHHHHHHHHHHccCc
11206 Confidence 866 78899999999999997764
11207
11208
11209 No 226
11210 >5YVI_A Transportin-1, RNA-binding protein FUS; Importin family, PROTEIN TRANSPORT, PROTEIN; 2.9A {Homo sapiens}
11211 Probab=94.92 E-value=0.00036 Score=74.50 Aligned_cols=156 Identities=12% Similarity=0.081 Sum_probs=94.0 Template_Neff=13.300
11212
11213 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
11214 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
11215 ..++.+...+. +.++.++..++.++..++..... .... .-..+++.+...+.+.+..++..++.++..++...
11216 T Consensus 645 ~~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~l~~l~~~l~~~~~~v~~~a~~~l~~l~~~~ 717 (868)
11217 T 5YVI_A 645 NILTLMYQCMQ-DKMPEVRQSSFALLGDLTKACFQ-----HVKP-CIADFMPILGTNLNPEFISVCNNATWAIGEISIQM 717 (868)
11218 T ss_dssp CHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHCHH-----HHGG-GHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHH
11219 T ss_pred hHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHhHH-----hHHH-HHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHc
11220 Confidence 34555666665 35677888899999888764321 0111 11346666777777777888999999999888652
11221
11222
11223 Q NP_000290.2 627 -LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
11224 Q Consensus 627 -e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
11225 .........+++.+...+.+. ..+..++..++.+|..++...+....... ..+++.++..+.+..++.++..++
11226 T Consensus 718 ~~~~~~~~~~i~~~l~~~l~~~----~~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~r~~~~ 792 (868)
11227 T 5YVI_A 718 GIEMQPYIPMVLHQLVEIINRP----NTPKTLLENTAITIGRLGYVCPQEVAPML-QQFIRPWCTSLRNIRDNEEKDSAF 792 (868)
11228 T ss_dssp GGGGGGGGGGTHHHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHCHHHHGGGH-HHHHHHHHHHHTTSCSSHHHHHHH
11229 T ss_pred cccchhcHHHHHHHHHHHhcCC----CCChhHHHHHHHHHHHHHHHCHHHHHHHH-HHHHHHHHHHhhcCCChHHHHHHH
11230 Confidence 111111123566666666541 01467888899999988865332111111 234555555555322567888888
11231
11232
11233 Q NP_000290.2 706 LLLSDMWSS 714 (747)
11234 Q Consensus 706 ~aLsnL~~~ 714 (747)
11235 .++..+...
11236 T Consensus 793 ~~l~~l~~~ 801 (868)
11237 T 5YVI_A 793 RGICTMISV 801 (868)
11238 T ss_dssp HHHHHC-CC
11239 T ss_pred HHHHHHHhh
11240 Confidence 888888754
11241
11242
11243 No 227
11244 >6QH7_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: SEP; 3.4A {Rattus norvegicus}
11245 Probab=94.91 E-value=0.00038 Score=73.02 Aligned_cols=108 Identities=17% Similarity=0.103 Sum_probs=69.7 Template_Neff=12.200
11246
11247 Q NP_000290.2 242 CSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLL--RSPNQNVQQAAAGALRNLVFRST 319 (747)
11248 Q Consensus 242 ~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL--~s~d~eVr~~AL~aLs~La~~~~ 319 (747)
11249 ....+++.+...+.+.++.++..++.++..+.... ....+++.+...+ .+.++.++..++.++..+.....
11250 T Consensus 108 ~~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~-------~~~~l~~~l~~~l~~~~~~~~vr~~a~~~L~~~~~~~~ 180 (621)
11251 T 6QH7_A 108 LIRLINNAIKNDLASRNPTFMGLALHCIANVGSRE-------MAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSP 180 (621)
11252 T ss_dssp HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCHH-------HHHHHTTHHHHHHTTSCCCHHHHHHHHHHHHHHHHHCG
11253 T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCHH-------HHHHHHhhHHHHHHcCCCCHHHHHHHHHHHHHHHHHCh
11254 Confidence 33445556666666677788888888888775421 1123455566666 66677888888888888765332
11255
11256
11257 Q NP_000290.2 320 TNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
11258 Q Consensus 320 ~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
11259 ... .....++.+...+. +.++.++..++.++..+...
11260 T Consensus 181 ~~~---~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 217 (621)
11261 T 6QH7_A 181 DLV---PMGDWTSRVVHLLN-DQHLGVVTAATSLITTLAQK 217 (621)
11262 T ss_dssp GGC---CCCTTHHHHHHGGG-CSSHHHHHHHHHHHHHHHTT
11263 T ss_pred hhc---CccchHHHHHHHhc-CCCHHHHHHHHHHHHHHHHh
11264 Confidence 211 11245566667775 55677888888888887753
11265
11266
11267 No 228
11268 >1B3U_A PROTEIN PHOSPHATASE PP2A, 65 KD; SCAFFOLD PROTEIN, PP2A, PHOSPHORYLATION, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.2
11269 Probab=94.85 E-value=0.0004 Score=70.07 Aligned_cols=146 Identities=11% Similarity=0.055 Sum_probs=95.0 Template_Neff=13.400
11270
11271 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
11272 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
11273 ..++.+..++. +.+..++..++.+|..+...... . . ....+++.+...+.+.+..++..++.++..+....
11274 T Consensus 441 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~ 511 (588)
11275 T 1B3U_A 441 KLNSLCMAWLV-DHVYAIREAATSNLKKLVEKFGK------E-W-AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVC 511 (588)
11276 T ss_dssp HHHHHHHHGGG-CSSHHHHHHHHHHHHHHHHHHCH------H-H-CCCCCHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
11277 T ss_pred HHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHhCh------H-H-HHHhHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHh
11278 Confidence 34566667776 46677888888888888764221 1 1 12356677777777777888888888888887642
11279
11280
11281 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
11282 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
11283 .. ......+++.+...+.+ .++.++..++.++..+...... ......+++.+...+.+. ++.++..+..
11284 T Consensus 512 ~~-~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~ 580 (588)
11285 T 1B3U_A 512 GQ-DITTKHMLPTVLRMAGD------PVANVRFNVAKSLQKIGPILDN---STLQSEVKPILEKLTQDQ-DVDVKYFAQE 580 (588)
11286 T ss_dssp HH-HHCCCCCHHHHHHGGGC------SCHHHHHHHHHHHHHHGGGSCH---HHCCCCCHHHHHHHTTCS-SHHHHHHHHH
11287 T ss_pred CH-HHHHhchHHHHHHHhCC------CcHHHHHHHHHHHHHHHHHhcC---CcchHHHHHHHHHHhcCC-ChhHHHHHHH
11288 Confidence 11 11123455666666665 3678899999999988754211 112224566677777765 7788888888
11289
11290
11291 Q NP_000290.2 707 LLSDMW 712 (747)
11292 Q Consensus 707 aLsnL~ 712 (747)
11293 ++..+.
11294 T Consensus 581 ~l~~l~ 586 (588)
11295 T 1B3U_A 581 ALTVLS 586 (588)
11296 T ss_dssp HHHHTT
11297 T ss_pred HHHHhh
11298 Confidence 887765
11299
11300
11301 No 229
11302 >4HM9_A Beta-catenin-like protein 1; all alpha-helical, armadillo repeats, PROTEIN; 3.1001A {Homo sapiens}
11303 Probab=94.77 E-value=0.00057 Score=75.04 Aligned_cols=161 Identities=14% Similarity=0.093 Sum_probs=111.6 Template_Neff=8.100
11304
11305 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSK--KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-----SG----NSDV 611 (747)
11306 Q Consensus 543 lve~G~I~~LL~LL~ss~--d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-----s~----d~eV 611 (747)
11307 +.+.++++.|+.+|.. . ....+..|+.+|.+|+...+. ....+.+.++++.|+.+|. ++ ....
11308 T Consensus 241 i~~~g~l~~Ll~lL~~-~~~~~~~k~~AaeiL~~L~~~~~~-----~r~~l~~~g~I~~LL~lL~~y~~~d~~~~~e~e~ 314 (568)
11309 T 4HM9_A 241 GAQQGLLQWLLKRLKA-KMPFDANKLYCSEVLAILLQDNDE-----NRELLGELDGIDVLLQQLSVFKRHNPSTAEEQEM 314 (568)
11310 T ss_dssp HCCCCCHHHHHHHHHS-SCCCCHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTHHHHHHHHHGGGTTSCCSSSHHHHH
11311 T ss_pred HHHCCHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHcCCHH-----HHHHHHhCchHHHHHHHHHhhhccCCCCHHHHHH
11312 Confidence 3567889999999983 3 466778899999999875332 2444456889999999995 11 1234
11313
11314
11315 Q NP_000290.2 612 VRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS--QPQLAKQYFSSSMLNNI 688 (747)
11316 Q Consensus 612 r~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~--s~e~~~~Lve~giL~~L 688 (747)
11317 ...++.+|.+++..+.. ..++..++++.++.+|.. ....+..|+.+|..++.. .......+++.+++..|
11318 T Consensus 315 ~en~~~aL~~L~~~~~~r~~f~~~~gv~lLv~lL~~-------~~~~~~~Al~vL~~a~~~~~~~~~~~~~ve~ggl~~L 387 (568)
11319 T 4HM9_A 315 MENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLRE-------KKISRSSALKVLDHAMIGPEGTDNCHKFVDILGLRTI 387 (568)
11320 T ss_dssp HHHHHHHHHHHTTSTHHHHHHHHTTHHHHHHHHHHH-------TSTTHHHHHHHHHHHHCSGGGHHHHHHHHHTTCHHHH
11321 T ss_pred HHHHHHHHHHHhCCHHHHHHHHHCChHHHHHHHHhC-------ChhHHHHHHHHHHHHhcCCCChhHHHHHHHHchHHHH
11322 Confidence 55668888888876544 355666788888888875 234567778888665442 34456677777888888
11323
11324
11325 Q NP_000290.2 689 INLCRSS---------ASPKAAEAARLLLSDMWSSKE 716 (747)
11326 Q Consensus 689 l~LL~s~---------~d~eVr~aAL~aLsnL~~~~~ 716 (747)
11327 +.++... ......+.++.+|..|+....
11328 T Consensus 388 ~~ll~~~~~~~~~~~~~~~e~~E~~~~iL~sL~~~~~ 424 (568)
11329 T 4HM9_A 388 FPLFMKSPRKIKKVGTTEKEHEEHVCSILASLLRNLR 424 (568)
11330 T ss_dssp HHHHHSCCCCCSSSSCCHHHHHHHHHHHHHHHHHHCC
11331 T ss_pred HHHHhcCcchhcCCCCCHHHHHHHHHHHHHHHHhcCC
11332 Confidence 8876532 134567888888888886543
11333
11334
11335 No 230
11336 >6QH5_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
11337 Probab=94.76 E-value=0.00048 Score=72.19 Aligned_cols=144 Identities=13% Similarity=0.054 Sum_probs=85.0 Template_Neff=12.200
11338
11339 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSD--VVRSGASLLSNMSRH 625 (747)
11340 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~e--Vr~~AL~aLsnLa~~ 625 (747)
11341 .++.|+..+. +.++.++..++.++..+...... ....+++.+...+.+.+.. ++..++++++.+...
11342 T Consensus 442 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~ 510 (621)
11343 T 6QH5_A 442 YVDTILNLIR-IAGDYVSEEVWYRVIQIVINRDD----------VQGYAAKTVFEALQAPACHENLVKVGGYILGEFGNL 510 (621)
11344 T ss_pred HHHHHHHHhc-CCCHHHcHHHHHHHHHHHhcCHH----------HHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhh
11345 Confidence 4556666665 34556666777777766543111 1233455666666655544 777788888777654
11346
11347
11348 Q NP_000290.2 626 P-LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC---RSSASPKAA 701 (747)
11349 Q Consensus 626 ~-e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL---~s~~d~eVr 701 (747)
11350 . .........+++.|...+.+ .+..++..++.+|..+....+. . ...+..++..+ .+. ++.++
11351 T Consensus 511 ~~~~~~~~~~~~~~~L~~~l~~------~~~~vr~~a~~al~~l~~~~~~-----~-~~~l~~ll~~l~~~~~~-~~~vr 577 (621)
11352 T 6QH5_A 511 IAGDPRSSPLIQFNLLHSKFHL------CSVPTRALLLSTYIKFVNLFPE-----V-KATIQDVLRSDSQLKNA-DVELQ 577 (621)
11353 T ss_pred CCCCCCCCHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhCHH-----H-HhHHHHHHHHHHhcCCC-CHHHH
11354 Confidence 1 11110111245556666655 3567888899999988764322 1 12344555544 444 77889
11355
11356
11357 Q NP_000290.2 702 EAARLLLSDMWSSK 715 (747)
11358 Q Consensus 702 ~aAL~aLsnL~~~~ 715 (747)
11359 ..++.++..+....
11360 T Consensus 578 ~~a~~~l~~~~~~~ 591 (621)
11361 T 6QH5_A 578 QRAVEYLRLSTVAS 591 (621)
11362 T ss_pred HHHHHHHHHhCCCc
11363 Confidence 99999988876543
11364
11365
11366 No 231
11367 >5MFO_F YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: CA, EDO; 1.3A {synthetic construct}
11368 Probab=94.68 E-value=0.00052 Score=58.87 Aligned_cols=134 Identities=25% Similarity=0.276 Sum_probs=89.8 Template_Neff=13.100
11369
11370 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
11371 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
11372 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+.+.+..++..++.++..++...+.....+
11373 T Consensus 47 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 126 (202)
11374 T 5MFO_F 47 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 126 (202)
11375 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
11376 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
11377 Confidence 45566666777777888899999999886544333334444577777777777777888889999998876543333333
11378
11379
11380 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
11381 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
11382 ...++++.+...+. ..+..++..++.++..++..... ...+.. ++++.|..++.
11383 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 182 (202)
11384 T 5MFO_F 127 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGAEPALEQLQS 182 (202)
11385 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHTTTT
11386 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcChHHHHHHHHHCCHHHHHHHHHc
11387 Confidence 34456777777776 55677888888999888875322 222222 56666666664
11388
11389
11390 No 232
11391 >5MFO_E YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: EDO, CA; 1.3A {synthetic construct}
11392 Probab=94.66 E-value=0.00054 Score=58.80 Aligned_cols=134 Identities=25% Similarity=0.276 Sum_probs=89.7 Template_Neff=13.100
11393
11394 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
11395 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
11396 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+.+.+..++..++.++..++.........+
11397 T Consensus 47 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 126 (202)
11398 T 5MFO_E 47 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 126 (202)
11399 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
11400 T ss_pred hHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
11401 Confidence 45566666777778888899999999886544333334444577777777777777888889999988876543333333
11402
11403
11404 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
11405 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
11406 ...++++.+...+. ..+..++..++.++..++..... ...+.. ++++.|..++.
11407 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 182 (202)
11408 T 5MFO_E 127 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGAEPALEQLQS 182 (202)
11409 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT
11410 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHCCHHHHHHHHHc
11411 Confidence 33456777777776 55677888889999888875322 222222 56666666654
11412
11413
11414 No 233
11415 >4MFU_A Beta-catenin-like protein 1; ARM repeats, GENE REGULATION; 2.744A {Homo sapiens}
11416 Probab=94.63 E-value=0.00067 Score=72.78 Aligned_cols=161 Identities=14% Similarity=0.093 Sum_probs=111.4 Template_Neff=8.700
11417
11418 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSK--KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-----SG----NSDV 611 (747)
11419 Q Consensus 543 lve~G~I~~LL~LL~ss~--d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-----s~----d~eV 611 (747)
11420 +.+.++++.|+.++.. . ....+..++.+|.+++...+. ....+.+.++++.|+.++. ++ ....
11421 T Consensus 163 i~~~~~l~~Ll~~L~~-~~~~~~~k~~a~~~L~~L~~~~~~-----~~~~l~~~g~i~~Ll~lL~~~~~~d~~~~~~~e~ 236 (490)
11422 T 4MFU_A 163 GAQQGLLQWLLKRLKA-KMPFDANKLYCSEVLAILLQDNDE-----NRELLGELDGIDVLLQQLSVFKRHNPSTAEEQEM 236 (490)
11423 T ss_dssp HCCCCCHHHHHHHHHC-CSCCCHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTHHHHHHHHHHTTSSSCCSSHHHHHH
11424 T ss_pred HHHCCHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHcCCHH-----HHHHHHhCchHHHHHHHHHhhhhcCCCCHHHHHH
11425 Confidence 3567889999999983 3 467788899999999875332 2444456789999999985 11 1234
11426
11427
11428 Q NP_000290.2 612 VRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS--QPQLAKQYFSSSMLNNI 688 (747)
11429 Q Consensus 612 r~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~--s~e~~~~Lve~giL~~L 688 (747)
11430 ...++.+|++++..+.. ..++..++++.++.++.. ....+..|+.+|...+.. ++.....+++.+++..|
11431 T Consensus 237 ~en~~~aL~~L~~~~~~~~~f~~~~gi~llv~lL~~-------~~~~~~~AL~~L~~a~~~~~~~~~~~~~v~~ggl~~L 309 (490)
11432 T 4MFU_A 237 MENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLRE-------KKISRSSALKVLDHAMIGPEGTDNCHKFVDILGLRTI 309 (490)
11433 T ss_dssp HHHHHHHHHHHHHSTHHHHHHHHTTHHHHHHHHHHT-------TSSTHHHHHHHHHHHHSSGGGHHHHHHHHHTTHHHHH
11434 T ss_pred HHHHHHHHHHHhCCHHHHHHHHHCCcHHHHHHHHhC-------ChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHchHHHH
11435 Confidence 45568888888876444 355666788888888865 234566677777665442 34456677777888888
11436
11437
11438 Q NP_000290.2 689 INLCRSS---------ASPKAAEAARLLLSDMWSSKE 716 (747)
11439 Q Consensus 689 l~LL~s~---------~d~eVr~aAL~aLsnL~~~~~ 716 (747)
11440 +.++... .+..+.+.++.+|..|+....
11441 T Consensus 310 ~~~l~~~~~~~~~~~~~~~~~~E~~~~il~sL~~~~~ 346 (490)
11442 T 4MFU_A 310 FPLFMKSPRKIKKVGTTEKEHEEHVCSILASLLRNLR 346 (490)
11443 T ss_dssp HHHHHCCCCSCCSSCCCSHHHHHHHHHHHHHHHHHCC
11444 T ss_pred HHHHhcCcccccCCCCCHHHHHHHHHHHHHHHHhcCC
11445 Confidence 8877542 134677888899888887543
11446
11447
11448 No 234
11449 >2NYL_A Protein phosphatase 2, regulatory subunit; HEAT repeat, HYDROLASE-HYDROLASE INHIBITOR COMPLEX; HET: DAL, MSE, ACB, 1ZN, DAM, FGA; 3.8A {Homo sapiens} SCOP: a.118.1.2
11450 Probab=94.58 E-value=0.00059 Score=68.47 Aligned_cols=145 Identities=11% Similarity=0.056 Sum_probs=94.9 Template_Neff=13.500
11451
11452 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
11453 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
11454 .++.+..++. +.++.++..++.+|..+...... . . ....+++.+...+.+.+..++..++.++..+.....
11455 T Consensus 436 ~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~~ 506 (582)
11456 T 2NYL_A 436 LNSLCMAWLV-DHVYAIREAATSNLKKLVEKFGK------E-W-AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG 506 (582)
11457 T ss_dssp CHHHHHHGGG-CSSHHHHHHHHHHHHHHHHHHHH------H-H-HHHHTHHHHHHTTTCSSHHHHHHHHHHHHHHGGGSC
11458 T ss_pred HHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHCh------h-h-HHhcHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhC
11459 Confidence 4555666776 46777888899998888764221 1 1 124566777777777778888888998888876421
11460
11461
11462 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
11463 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
11464 .. .....+++.+...+.+ .++.++..++.++..+...... ......+++.+...+.+. ++.++..++.+
11465 T Consensus 507 ~~-~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 575 (582)
11466 T 2NYL_A 507 QD-ITTKHMLPTVLRMAGD------PVANVRFNVAKSLQKIGPILDN---STLQSEVKPILEKLTQDQ-DVDVKYFAQEA 575 (582)
11467 T ss_dssp HH-HHHHHTHHHHHHTSSC------SSHHHHHHHHHHHTTSSTTSCH---HHCCCCCHHHTTTTTTCS-SHHHHHHHHTT
11468 T ss_pred HH-HHHhcHHHHHHHHhcC------ChHHHHHHHHHHHHHHHHHcCC---CCcHHHHHHHHHHHhcCC-CHHHHHHHHHH
11469 Confidence 11 1123355666666665 3678889999999988764211 112224566677777665 77888888888
11470
11471
11472 Q NP_000290.2 708 LSDMW 712 (747)
11473 Q Consensus 708 LsnL~ 712 (747)
11474 +..++
11475 T Consensus 576 l~~l~ 580 (582)
11476 T 2NYL_A 576 LTVLS 580 (582)
11477 T ss_dssp TTTTT
11478 T ss_pred HHHhc
11479 Confidence 88765
11480
11481
11482 No 235
11483 >4U2X_F eVP24, KPNA5C; eVP24, importin alpha6, immune antagonist; 3.153A {Zaire ebolavirus}
11484 Probab=94.35 E-value=0.00082 Score=57.14 Aligned_cols=73 Identities=21% Similarity=0.253 Sum_probs=49.2 Template_Neff=12.500
11485
11486 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS 318 (747)
11487 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~ 318 (747)
11488 +++.+...+.+.++.++..++.++.+++.. .+.....+...++++.+...+...++.++..++.++.+++...
11489 T Consensus 51 ~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~ 124 (175)
11490 T 4U2X_F 51 IFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVALGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 124 (175)
11491 T ss_dssp CHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHH
11492 T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHhcc
11493 Confidence 455555666666677888888999888753 2223333334466777777777666777888888888887643
11494
11495
11496 No 236
11497 >3SL9_B Catenin beta-1, B-cell CLL/lymphoma 9; Armadillo repeat, components of the; HET: GOL, EDO, PEG, IMD; 2.2A {Homo sapiens}
11498 Probab=94.35 E-value=0.00082 Score=56.48 Aligned_cols=110 Identities=24% Similarity=0.309 Sum_probs=73.4 Template_Neff=12.600
11499
11500 Q NP_000290.2 246 TIPKAVQYLSS-QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
11501 Q Consensus 246 iL~~Ll~lL~s-sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
11502 +++.+...+.. .+..++..++.++.+++.. +.....+...++++.+..++...++.++..++.++.+++.........
11503 T Consensus 56 ~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 134 (167)
11504 T 3SL9_B 56 MVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 134 (167)
11505 T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-HhHHHHHHHCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHhHHHH
11506 Confidence 55566666665 5677888889999888743 333334444567788888887777788888999999888654332222
11507
11508
11509 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNL 357 (747)
11510 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnL 357 (747)
11511 ....++++.+..++. ..++.++..++.++..+
11512 T Consensus 135 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l 166 (167)
11513 T 3SL9_B 135 VRLAGGLQKMVALLN-KTNVKFLAITTDCLQIL 166 (167)
11514 T ss_pred HHHcCHHHHHHHHhc-CCCHHHHHHHHHHHHHh
11515 Confidence 222456777777776 45566777777776654
11516
11517
11518 No 237
11519 >4I5L_D PP2A A alpha subunit (9-589); EF Hand, Phosphatase, CDC6 (Substrate); HET: FGA, ACB, DAL, MLI, PEG, 1ZN, MAA; 2.43A {Microcystis aeruginosa}
11520 Probab=94.34 E-value=0.0008 Score=67.65 Aligned_cols=110 Identities=11% Similarity=0.101 Sum_probs=57.6 Template_Neff=13.400
11521
11522 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL-E 324 (747)
11523 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~-~ 324 (747)
11524 +++.+...+.+.++.++..++.++..+...... ......+++.+...+.+.++.++..++.++..+......... .
11525 T Consensus 239 ~~~~l~~~l~~~~~~vr~~~~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~ 315 (584)
11526 T 4I5L_D 239 VMPTLRQAAEDKSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCREN 315 (584)
11527 T ss_dssp THHHHHHHHTCSSHHHHHHHHHTHHHHHHHHHH---HHCCCCCHHHHHHHHTCSSHHHHHHHHTTHHHHHHTSCTTTHHH
11528 T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHCC---CCChhhHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhcCccchhh
11529 Confidence 334444455555666777777777666543221 111123455566666666667777777777776643221110 0
11530
11531
11532 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
11533 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
11534 .....+++.+...+. +.++.++..++.++..+..
11535 T Consensus 316 ~~~~~~~~~l~~~l~-~~~~~vr~~~~~~l~~l~~ 349 (584)
11536 T 4I5L_D 316 VIMSQILPCIKELVS-DANQHVKSALASVIMGLSP 349 (584)
11537 T ss_dssp HCCCCCHHHHHHHHT-CSCHHHHHHHHTTGGGGHH
11538 T ss_pred HHHHhHHHHHHHHcc-CCCHHHHHHHHHHHHHHHH
11539 Confidence 111234455555554 3445566666666665544
11540
11541
11542 No 238
11543 >4U2X_E eVP24, KPNA5C; eVP24, importin alpha6, immune antagonist; 3.153A {Zaire ebolavirus}
11544 Probab=94.27 E-value=0.00091 Score=56.83 Aligned_cols=73 Identities=21% Similarity=0.253 Sum_probs=49.3 Template_Neff=12.500
11545
11546 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS 318 (747)
11547 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~ 318 (747)
11548 +++.+...+.+.++.++..++.++.+++.. .......+...+.++.+...+.+.++.++..++.++.+++...
11549 T Consensus 51 ~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~ 124 (175)
11550 T 4U2X_E 51 IFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVALGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 124 (175)
11551 T ss_dssp CHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHH
11552 T ss_pred hHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHhhc
11553 Confidence 445555666666677888889999988753 2222333334456777777777667778888888888887654
11554
11555
11556 No 239
11557 >4UQI_B AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ENDOCYTOSIS, PROTEIN TRANSPORT, LIPID BINDING; HET: IHP; 2.79A {RATTUS NORVEGICUS}
11558 Probab=94.24 E-value=0.00095 Score=70.34 Aligned_cols=106 Identities=12% Similarity=0.039 Sum_probs=70.7 Template_Neff=12.200
11559
11560 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
11561 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
11562 ..+++.+...+.+.++.++..++.++..+.... ....+++.+...+.+.++.++..++.++..+........
11563 T Consensus 85 ~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~-------~~~~l~~~l~~~l~~~~~~vr~~a~~~L~~l~~~~~~~~- 156 (657)
11564 T 4UQI_B 85 IMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDK-------ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV- 156 (657)
11565 T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhhcCCch-------hHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCHHHh-
11566 Confidence 445555666666677788888888888775421 112355666666777778888889988888875433221
11567
11568
11569 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
11570 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
11571 ....+++.+...+. +.++.++..++.++..+...
11572 T Consensus 157 --~~~~~~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~ 190 (657)
11573 T 4UQI_B 157 --EDQGFLDSLRDLIA-DSNPMVVANAVAALSEISES 190 (657)
11574 T ss_pred --cCcchHHHHHHHhc-CCCHHHHHHHHHHHHHHHhc
11575 Confidence 12245666777776 55678888899988888764
11576
11577
11578 No 240
11579 >5KC2_B Phosphatidylinositol 3-kinase VPS34 (E.C.2.7.1.137), Serine/threonine-protein; autophagy, phosphatidylinositol 3-kinase (PtdIns3K), endocytosis; 28.0A {Saccharomyces cerevisiae}
11580 Probab=94.04 E-value=0.0013 Score=79.08 Aligned_cols=155 Identities=11% Similarity=0.032 Sum_probs=110.7 Template_Neff=9.500
11581
11582 Q NP_000290.2 544 YHSDAIRTYLNLM---GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIG----------------------LKEKGLP 598 (747)
11583 Q Consensus 544 ve~G~I~~LL~LL---~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~ll----------------------ie~giI~ 598 (747)
11584 +..++++.|..++ . +.++.++..|+.+|..++..... ....+ ...++++
11585 T Consensus 506 ~~~~~l~~L~~ll~~~~-d~~~~vR~~a~~~l~~la~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 579 (1454)
11586 T 5KC2_B 506 FVDYLLPRLKRLLISNR-QNTNYLRIVFANCLSDLAIIINR-----FQEFTFAQHCNDNSMDNNTEIMESSTKYSAKLIQ 579 (1454)
11587 T ss_pred HHcCcHHHHHHHHcCCC-CCcHHHHHHHHHHHHHHhcCCCC-----cceEEhhHHhhhHHHHHHHHHHHHHHHHHcCHHH
11588 Confidence 4667888899988 7 47788899999999988754221 01111 1245667
11589
11590
11591 Q NP_000290.2 599 QIARLLQS----GNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ 674 (747)
11592 Q Consensus 599 ~Ll~LL~s----~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e 674 (747)
11593 .|..++.. .++.++..|+.+|..+.......... .++++.|..++.+ .++.++..|+.+|..|+...
11594 T Consensus 580 ~l~~ll~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~-~~~l~~L~~~l~d------~~~~vR~~a~~al~~l~~~~-- 650 (1454)
11595 T 5KC2_B 580 SVEDLTVSFLTDNDTYVKMALLQNILPLCKFFGRERTN-DIILSHLITYLND------KDPALRVSLIQTISGISILL-- 650 (1454)
11596 T ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHHhcCcCchhHH-hhhHHHHHHHccC------CCHHHHHHHHHHHHHHHHhh--
11597 Confidence 77777765 78899999999999987652221111 4567888888876 47899999999999998743
11598
11599
11600 Q NP_000290.2 675 LAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
11601 Q Consensus 675 ~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
11602 ....+++.. ++.|+.+|.+. ++.++..++.+|..|+...
11603 T Consensus 651 ~~~~~~~~~-lp~L~~lL~d~-~~~vr~~al~aL~~L~~~~ 689 (1454)
11604 T 5KC2_B 651 GTVTLEQYI-LPLLIQTITDS-EELVVISVLQSLKSLFKTG 689 (1454)
11605 T ss_pred HHHHHHHcC-HHHHHHHhcCC-CHHHHHHHHHHHHHHhhCC
11606 Confidence 333444433 88888888876 7888999999999887655
11607
11608
11609 No 241
11610 >3SL9_E Catenin beta-1, B-cell CLL/lymphoma 9; Armadillo repeat, components of the; HET: PEG, GOL, IMD, EDO; 2.2A {Homo sapiens}
11611 Probab=94.03 E-value=0.0012 Score=55.43 Aligned_cols=110 Identities=24% Similarity=0.309 Sum_probs=72.2 Template_Neff=12.600
11612
11613 Q NP_000290.2 246 TIPKAVQYLSS-QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
11614 Q Consensus 246 iL~~Ll~lL~s-sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
11615 +++.+...+.. .+..++..++.++.+++.. ......+...++++.+..++...+..++..++.++.+++.........
11616 T Consensus 56 ~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 134 (167)
11617 T 3SL9_E 56 MVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 134 (167)
11618 T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS-HHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCTTHHHH
11619 T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-HhHHHHHHHCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHhHHHH
11620 Confidence 55566666665 5667888888898888743 333333444567777888887777788888999998887654332222
11621
11622
11623 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNL 357 (747)
11624 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnL 357 (747)
11625 ....++++.+..++. ..++.++..++.++..+
11626 T Consensus 135 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l 166 (167)
11627 T 3SL9_E 135 VRLAGGLQKMVALLN-KTNVKFLAITTDCLQIL 166 (167)
11628 T ss_dssp HHHTTHHHHHHHHHH-HSCGGGHHHHHHHHHHH
11629 T ss_pred HHHcCHHHHHHHHhc-CCCHHHHHHHHHHHHHh
11630 Confidence 222456777777776 45566777777766654
11631
11632
11633 No 242
11634 >3VWA_B Cytoplasmic export protein 1; tRNA, nuclear export, HEAT repeat; HET: MSE; 2.2A {Saccharomyces cerevisiae}
11635 Probab=93.76 E-value=0.0017 Score=68.89 Aligned_cols=150 Identities=11% Similarity=0.077 Sum_probs=108.5 Template_Neff=10.700
11636
11637 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
11638 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
11639 .++++.++..+. +.++.++..++.+|..++..... . . ....+++.|..++.+.++.++..++.+|+.++..
11640 T Consensus 379 ~~~l~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~------~-~-~~~~ll~~l~~~l~d~~~~vR~~a~~~l~~i~~~ 449 (560)
11641 T 3VWA_B 379 SRIYPHFIQGLT-DSDATLRLQTLKTIPCIVSCLTE------R-Q-LNNELLRFLAKTQVDSDVEIRTWTVIIISKISTI 449 (560)
11642 T ss_dssp CCCHHHHHHGGG-CSCHHHHHHHHHHHHHHGGGSCH------H-C-CCCCHHHHHHHHTTCSSHHHHHHHHHHHHHHHTT
11643 T ss_pred hchHHHHHHHhc-CCCHHHHHHHHHHHHHHHhhCCH------H-H-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
11644 Confidence 457788888887 47788999999999998864221 1 1 2356788888888888899999999999999876
11645
11646
11647 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
11648 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
11649 ... .......+++.+...+.+ .++.++..|+.+|..++.... ... +...+++.|..++.+. +..++..|
11650 T Consensus 450 ~~~~~~~~~~~l~~~l~~~l~d------~~~~vR~aa~~~l~~~~~~~~--~~~-~~~~~lp~l~~~l~d~-~~~VR~~a 519 (560)
11651 T 3VWA_B 450 LSTSVGNRSNILATAFTKSLKD------PQVKPRLAALYGLEKSIELFD--VNT-IANKILTVIAPGLLDK-SPIVRGRA 519 (560)
11652 T ss_dssp SSSCHHHHHHHHHHHHHHHHTC------SSHHHHHHHHHHHHHTGGGSC--HHH-CCCCCHHHHGGGGGCS-SHHHHHHH
11653 T ss_pred hccccchhHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHCC--HHH-HHHHHHHHHHHHHCCC-CHHHHHHH
11654 Confidence 211 111123455666677765 478899999999999886422 112 2245788888888877 88999999
11655
11656
11657 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
11658 Q Consensus 705 L~aLsnL~~~ 714 (747)
11659 +.+|..++..
11660 T Consensus 520 ~~~l~~~~~~ 529 (560)
11661 T 3VWA_B 520 KILFEEYLEK 529 (560)
11662 T ss_dssp HHHHHHHHHH
11663 T ss_pred HHHHHHHHHH
11664 Confidence 9999888754
11665
11666
11667 No 243
11668 >5DFZ_B Vacuolar protein sorting-associated protein 38; Vps34, Vps15, Vps30, Vps38, Autophagy; 4.4A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
11669 Probab=93.74 E-value=0.0018 Score=77.73 Aligned_cols=155 Identities=10% Similarity=0.029 Sum_probs=111.5 Template_Neff=9.900
11670
11671 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
11672 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
11673 .++++.|+.+|. +.++.+|..|+.+|..+...... .. .....++.|+.++.+.++.++..|+.+|..+...
11674 T Consensus 608 ~~~l~~Li~ll~-d~~~~VR~~a~~aL~~i~~~~~~-------~~-~~~~~i~~L~~~l~d~~~~vR~~a~~aL~~~~~~ 678 (1460)
11675 T 5DFZ_B 608 DIILSHLITYLN-DKDPALRVSLIQTISGISILLGT-------VT-LEQYILPLLIQTITDSEELVVISVLQSLKSLFKT 678 (1460)
11676 T ss_pred HhHHHHHHHHhc-CCCHHHHHHHHHHHHHHHhhcCc-------hh-hchhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
11677 Confidence 357888888888 57889999999999998864221 11 1234578888899988899999999999766543
11678
11679
11680 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
11681 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
11682 ......+..++++.|..++.+ .++.++..|+.+|..+....... .....+++.|+.++.+. ++.++..|+
11683 T Consensus 679 ~~~~~~~~~~~i~~l~~~l~d------~~~~VR~~A~~al~~l~~~~~~~---~~~~~~l~~L~~~l~d~-~~~vr~~a~ 748 (1460)
11684 T 5DFZ_B 679 GLIRKKYYIDISKTTSPLLLH------PNNWIRQFTLMIIIEIINKLSKA---EVYCILYPIIRPFFEFD-VEFNFKSMI 748 (1460)
11685 T ss_pred cchhhcccchhHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHhcCC-CHHHHHHHH
11686 Confidence 222111112367778888876 47889999999999987642111 11234688888888877 889999999
11687
11688
11689 Q NP_000290.2 706 LLLSDMWSSKELQG 719 (747)
11690 Q Consensus 706 ~aLsnL~~~~~~~~ 719 (747)
11691 .+|..+..+...+-
11692 T Consensus 749 ~aL~~~~~~~~~~~ 762 (1460)
11693 T 5DFZ_B 749 SCCKQPVSRSVYNL 762 (1460)
11694 T ss_pred HHhCCCCCHHHHHH
11695 Confidence 99999887776664
11696
11697
11698 No 244
11699 >6HWP_A A3_bGFPD; alphaRep, artificial protein, chimera, bidomain; 2.547A {synthetic construct}
11700 Probab=93.71 E-value=0.0016 Score=62.80 Aligned_cols=91 Identities=14% Similarity=0.155 Sum_probs=54.4 Template_Neff=12.900
11701
11702 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
11703 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
11704 ..++.+...+.+.+..++..++..+..+.. ..+++.+...+.+.++.++..++..+..+..
11705 T Consensus 23 ~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~-----------~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~-------- 83 (409)
11706 T 6HWP_A 23 EKVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD-------- 83 (409)
11707 T ss_dssp CCHHHHHHGGGCSSHHHHHHHHHHHHHSCC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTC--------
11708 T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHhcC-----------HhhHHHHHHHhcCCCHHHHHHHHHHHHHhcC--------
11709 Confidence 445556666666677778888877776643 1234445555556667777777777766543
11710
11711
11712 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
11713 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
11714 ...++.+...+. +.++.++..++.++..+.
11715 T Consensus 84 ---~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~ 113 (409)
11716 T 6HWP_A 84 ---ERAVEPLIKALK-DEDGWVRQSAAVALGQIG 113 (409)
11717 T ss_dssp ---GGGHHHHHHHTT-CSSHHHHHHHHHHHHHHT
11718 T ss_pred ---HhhHHHHHHHhc-CCCHHHHHHHHHHHHHHC
11719 Confidence 123344445554 445566666666666554
11720
11721
11722 No 245
11723 >3TT9_A Plakophilin-2; CELL ADHESION; HET: GOL; 1.55A {Homo sapiens}
11724 Probab=93.69 E-value=0.0017 Score=58.18 Aligned_cols=169 Identities=18% Similarity=0.246 Sum_probs=122.4 Template_Neff=12.300
11725
11726 Q NP_000290.2 542 WLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLS 620 (747)
11727 Q Consensus 542 ~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLs 620 (747)
11728 .+++.|+++.|+.++. ..++.++..++++|.+++...+. ....+.+.++++.|+.++. ..+..++..++++|.
11729 T Consensus 47 ~~~~~~~i~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~ 120 (233)
11730 T 3TT9_A 47 RVNQLRGILKLLQLLK-VQNEDVQRAVCGALRNLVFEDND-----NKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLW 120 (233)
11731 T ss_dssp HHHHTTHHHHHHHGGG-CCCHHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHH
11732 T ss_pred HHHHcchHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCCc-----HHHHHHHcccHHHHHHHHhhCCCHHHHHHHHHHHH
11733 Confidence 3467788999999998 46778889999999999874332 2444456789999999998 567889999999999
11734
11735
11736 Q NP_000290.2 621 NMSRHPLL-HRVMGNQVFPEVTRLLTSHTGN---------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSM-LNNII 689 (747)
11737 Q Consensus 621 nLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~---------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~gi-L~~Ll 689 (747)
11738 +++..... ..+...+++..+..++...... ...+..++..++++|.+++...+.....+.+.+. ++.|+
11739 T Consensus 121 ~l~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~ 200 (233)
11740 T 3TT9_A 121 NLSSNDKLKNLMITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLV 200 (233)
11741 T ss_dssp HHHTSGGGHHHHHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHH
11742 T ss_pred HHccCHHHHHHhhhhcHHHHHHHHHhhccCCCCCCCCcccCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcccHHHHHH
11743 Confidence 99876433 3334455666666665431000 0014677889999999999855666666776666 88888
11744
11745
11746 Q NP_000290.2 690 NLCRSSA-----SPKAAEAARLLLSDMWSSKE 716 (747)
11747 Q Consensus 690 ~LL~s~~-----d~eVr~aAL~aLsnL~~~~~ 716 (747)
11748 .++.... ++.++..++++|.+|+...+
11749 T Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~L~~l~~~~~ 232 (233)
11750 T 3TT9_A 201 HYVRGTIADYQPDDKATENCVCILHNLSYQLE 232 (233)
11751 T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHCCCCC
11752 T ss_pred HHHHcccccCCCChHHHHHHHHHHHHhhhccc
11753 Confidence 8887542 46788899999999887654
11754
11755
11756 No 246
11757 >3VWA_A Cytoplasmic export protein 1; tRNA, nuclear export, HEAT repeat; 2.2A {Saccharomyces cerevisiae}
11758 Probab=93.63 E-value=0.0019 Score=68.57 Aligned_cols=152 Identities=11% Similarity=0.067 Sum_probs=108.9 Template_Neff=10.600
11759
11760 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
11761 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
11762 ..++++.++..+. +.++.++..++.+|..++...+. . . ....+++.|..++.+.++.++..++.+|..++.
11763 T Consensus 378 ~~~~~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~------~-~-~~~~ll~~l~~~l~d~~~~vR~~a~~~l~~i~~ 448 (560)
11764 T 3VWA_A 378 SSRIYPHFIQGLT-DSDATLRLQTLKTIPCIVSCLTE------R-Q-LNNELLRFLAKTQVDSDVEIRTWTVIIISKIST 448 (560)
11765 T ss_dssp CCCCHHHHHHGGG-CSSHHHHHHHHHHHHHHGGGCCH------H-C-CCCCCHHHHHHHTTCSSHHHHHHHHHHHHHHGG
11766 T ss_pred HhchHHHHHHHhc-CCCHHHHHHHHHHHHHHHhhCCH------H-H-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
11767 Confidence 3457888888887 47788999999999988864321 1 1 235678888888888889999999999999987
11768
11769
11770 Q NP_000290.2 625 HPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
11771 Q Consensus 625 ~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
11772 .... .......+++.+...+.+ .++.++..|+.+|..++.... ...+ ...+++.+..++.+. +..++..
11773 T Consensus 449 ~~~~~~~~~~~~l~~~l~~~l~d------~~~~vR~~a~~~l~~~~~~~~--~~~~-~~~ilp~l~~ll~d~-~~~VR~~ 518 (560)
11774 T 3VWA_A 449 ILSTSVGNRSNILATAFTKSLKD------PQVKPRLAALYGLEKSIELFD--VNTI-ANKILTVIAPGLLDK-SPIVRGR 518 (560)
11775 T ss_dssp GSSSCHHHHHHHHHHHHHHHHTC------SSHHHHHHHHHHHHHTGGGSC--HHHC-CCCCHHHHGGGGGCS-SHHHHHH
11776 T ss_pred HhccchhhhHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHCC--HHHH-HHHHHHHHHHHHCCC-CHHHHHH
11777 Confidence 6211 111223455666677765 378899999999999886422 1122 235688888888877 8899999
11778
11779
11780 Q NP_000290.2 704 ARLLLSDMWSSK 715 (747)
11781 Q Consensus 704 AL~aLsnL~~~~ 715 (747)
11782 |+.+|..+...-
11783 T Consensus 519 a~~~l~~i~~~l 530 (560)
11784 T 3VWA_A 519 AKILFEEYLEKL 530 (560)
11785 T ss_dssp HHHHHHHHHHHH
11786 T ss_pred HHHHHHHHHHHH
11787 Confidence 999988877543
11788
11789
11790 No 247
11791 >1XQR_A HspBP1 protein; armadillo repeat, superhelical twist, CHAPERONE; HET: MSE; 2.1A {Homo sapiens} SCOP: a.118.1.21
11792 Probab=93.61 E-value=0.0019 Score=61.69 Aligned_cols=122 Identities=15% Similarity=0.146 Sum_probs=77.8 Template_Neff=11.300
11793
11794 Q NP_000290.2 257 QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVD-LLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAV 335 (747)
11795 Q Consensus 257 sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~-lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll 335 (747)
11796 .++.++..++..|..++.. ......+...++++.++. ++...++.++..++.++.+++.........+...++++.+.
11797 T Consensus 52 ~~~~~~~~al~~L~~l~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~l~~~~~~~~l~ 130 (296)
11798 T 1XQR_A 52 ADQQEREGALELLADLCEN-MDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLL 130 (296)
11799 T ss_dssp HHHHHHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHCCCCCTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH
11800 T ss_pred CCHHHHHHHHHHHHHHHcC-HHHHHHHHHcccHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCHHHHHH
11801 Confidence 4456777788888887764 333334445566777777 77776778888999999998865443333344445777777
11802
11803
11804 Q NP_000290.2 336 SLLRRTG-NAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
11805 Q Consensus 336 ~lL~ss~-d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
11806 .++. .. ++.++..++.++.+++..... ...+.. ++++.|+.++.
11807 T Consensus 131 ~~l~-~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~~l~ 177 (296)
11808 T 1XQR_A 131 RLLD-RDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQ 177 (296)
11809 T ss_dssp HHHH-HCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
11810 T ss_pred HHHh-cCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhh
11811 Confidence 7776 33 567788888888888764322 222222 45555555543
11812
11813
11814 No 248
11815 >1XQS_B HSPBP1 protein, Heat shock 70; armadillo repeat, superhelical twist, CHAPERONE; HET: AMP; 2.9A {Homo sapiens} SCOP: a.118.1.21
11816 Probab=93.37 E-value=0.0023 Score=59.66 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=77.3 Template_Neff=11.900
11817
11818 Q NP_000290.2 257 QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVD-LLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAV 335 (747)
11819 Q Consensus 257 sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~-lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll 335 (747)
11820 .+..++..++..|..++.. ......+...++++.++. ++...+..++..++.++..++.........+...++++.+.
11821 T Consensus 36 ~~~~~~~~al~~L~~l~~~-~~~~~~~~~~~~i~~l~~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~ 114 (280)
11822 T 1XQS_B 36 ADQQEREGALELLADLCEN-MDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLL 114 (280)
11823 T ss_dssp HHHHHHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHCCCCCTSCSCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHH
11824 T ss_pred cCHHHHHHHHHHHHHHHhc-HHHHHHHHHcccHHHHHHHHhhcCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCHHHHHH
11825 Confidence 4466777888888888654 233334445567777777 77766778888899999998865443333444445777777
11826
11827
11828 Q NP_000290.2 336 SLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
11829 Q Consensus 336 ~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
11830 .++....++.++..++.++.+++..... ...+.. ++++.|+.++.
11831 T Consensus 115 ~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 161 (280)
11832 T 1XQS_B 115 RLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQ 161 (280)
11833 T ss_dssp HHHHSCSCHHHHHHHHHHHHHTTSSCHHHHHHHHTTTHHHHHHHHHT
11834 T ss_pred HHhccCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHCCHHHHHHHHhh
11835 Confidence 7775222566777888888888764322 222222 44555554443
11836
11837
11838 No 249
11839 >5VOZ_P V-type proton ATPase catalytic subunit; V-ATPase, SidK, rotational state 3;{Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
11840 Probab=93.32 E-value=0.0027 Score=67.46 Aligned_cols=330 Identities=11% Similarity=0.063 Sum_probs=181.1 Template_Neff=8.900
11841
11842 Q NP_000290.2 290 CKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTN---KLETR---RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
11843 Q Consensus 290 ~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~---~~~ll---~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
11844 ..++.++.. .+.++...++.++..++...+ . ...++ ..+.++.++.++. . ++.++..++.+|..++...
11845 T Consensus 78 ~~li~LL~~~~~~d~~~~~l~~l~~ll~~~~-~~~~r~~~~~~~~~~~~~~li~lL~-~-d~~i~~~a~~~L~~L~~~~- 153 (478)
11846 T 5VOZ_P 78 IPLIHLLSTSDNEDCKKSVQNLIAELLSSDK-YGDDTVKFFQEDPKQLEQLFDVSLK-G-DFQTVLISGFNVVSLLVQN- 153 (478)
11847 T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHCSS-SCHHHHHHHHHCTHHHHHHTTSTTS-S-CHHHHHHHHHHHHHHHTSS-
11848 T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHcCCC-CccchhHHhccChhhHHHHHHHHcC-C-CHHHHHHHHHHHHHHHHhc-
11849 Confidence 556666654 466777788888888876544 3 22233 2456778888886 5 6677888888888887654
11850
11851
11852 Q NP_000290.2 363 LK-EELIA-DALPV--LADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSAD 438 (747)
11853 Q Consensus 363 ~~-~~Lve-giLe~--Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (747)
11854 .. ..... ++++. ++.+|. ++ -++++-..|..||..-+. .+
11855 T Consensus 154 ~~~~~~~~~~~l~~~~li~~L~---------~~------~~~~~~~~a~~~L~~L~~---------------------~~ 197 (478)
11856 T 5VOZ_P 154 GLHNVKLVEKLLKNNNLINILQ---------NI------EQMDTCYVCIRLLQELAV---------------------IP 197 (478)
11857 T ss_dssp SCCCHHHHHHHHSSHHHHHHHH---------CS------SCHHHHHHHHHHHHHHTT---------------------SH
11858 T ss_pred cccCcccchhhcccchHHHHHh---------cc------CCccHHHHHHHHHHHHcC---------------------Ch
11859 Confidence 32 11122 66776 777761 11 123444555555533211 11
11860
11861
11862 Q NP_000290.2 439 AGRQTMRNY-SGLIDSLMAYVQNCVAA-----------SRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYT 506 (747)
11863 Q Consensus 439 ~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (747)
11864 ..|...... .|.|..|...+.+.... ...+..-..++...|.+|++
11865 T Consensus 198 ~~r~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~~~~~~~~~~~~ql~~~a~~~L~~Ls~---------------------- 255 (478)
11866 T 5VOZ_P 198 EYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTF---------------------- 255 (478)
11867 T ss_dssp HHHHHHHHSTTSSHHHHHHHHHHHHHSCSSCCCTTTSSSHHHHHHHHHHHHHHHHHTT----------------------
11868 T ss_pred HHHHHHHHccccchHHHHHHHHhccccccccccccccCcCcCHHHHHHHHHHHHHHhc----------------------
11869 Confidence 122222221 34455555444432110 00111111222222233322
11870
11871
11872 Q NP_000290.2 507 EKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHS--DAIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMS 583 (747)
11873 Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~--G~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s 583 (747)
11874 +......+.+. ++++.|+.+++. .. +.++..++.+|.+++...+.
11875 T Consensus 256 -----------------------------~~~~~~~l~~~~~~~i~~Lv~ll~~-~~kekv~r~al~~L~nL~~~~~~-- 303 (478)
11876 T 5VOZ_P 256 -----------------------------NPVFANELVQKYLSDFLDLLKLVKI-TIKEKVSRLCISIILQCCSTRVK-- 303 (478)
11877 T ss_dssp -----------------------------SHHHHHHHHHHSHHHHGGGHHHHHH-CCCHHHHHHHHHHHHHHTSTTST--
11878 T ss_pred -----------------------------CHHHHHHHHHHhHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHhccChH--
11879 Confidence 00111223444 789999999984 44 67888899999999875321
11880
11881
11882 Q NP_000290.2 584 SG-MSQLIGLKEKGLPQIARLLQSG---NSDVVRSGASLLSNMSRH-------P------------------------LL 628 (747)
11883 Q Consensus 584 ~~-~~~~llie~giI~~Ll~LL~s~---d~eVr~~AL~aLsnLa~~-------~------------------------e~ 628 (747)
11884 .. .....+...+.+..++..|... +++++..+..++..+... + +.
11885 T Consensus 304 ~~~~~~~~l~~~~~~l~ll~~L~~~~~~d~~l~~~l~~l~~~L~~~~~~lss~dey~~el~sg~l~wsp~h~s~~f~~~n 383 (478)
11886 T 5VOZ_P 304 QHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYVAELDSKLLCWSPPHVDNGFWSDN 383 (478)
11887 T ss_dssp THHHHHHHCCCCCCHHHHHHHHTSCCCSCTHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHTCCCCCTTTTCHHHHHHH
11888 T ss_pred hcHHHHHHHHHcCCHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHcCCCCCCCCcCCcChHHHh
11889 Confidence 00 0012333444344566666543 444544433333333100 0 01
11890
11891
11892 Q NP_000290.2 629 -HRVM--GNQVFPEVTRLLTSHTGNT----SNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
11893 Q Consensus 629 -~~ll--~~giI~~Ll~LL~s~s~~~----~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
11894 ..+. ..++++.|+.+|....... ..+..++..++..|++++...+.....+.+.++++.|+.++.+. ++.++
11895 T Consensus 384 ~~~~~~~~~~~l~~Lv~lL~~~~~~~~~~~~~~~~v~~~a~~~l~~lv~~~~~~~~~l~~~g~~~~L~~Ll~~~-~~~vr 462 (478)
11896 T 5VOZ_P 384 IDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELLNHS-DSRVK 462 (478)
11897 T ss_dssp HHHHTTSSSHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHHTCHHHHHHHHTSS-CHHHH
11898 T ss_pred HHHhhhccHHHHHHHHHHHHhhhhCCCCCccccHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHhcCC-CHHHH
11899 Confidence 0111 2457788888886510000 01244577788899999665566666677778899999999877 88999
11900
11901
11902 Q NP_000290.2 702 EAARLLLSDMWSS 714 (747)
11903 Q Consensus 702 ~aAL~aLsnL~~~ 714 (747)
11904 ..|+.++.+++.+
11905 T Consensus 463 ~~Al~al~~l~~~ 475 (478)
11906 T 5VOZ_P 463 YEALKATQAIIGY 475 (478)
11907 T ss_dssp HHHHHHHHHHHHH
11908 T ss_pred HHHHHHHHHHHhh
11909 Confidence 9999999988754
11910
11911
11912 No 250
11913 >5D80_H V-type proton ATPase catalytic subunit; Hydrolase, Autoinhibition; 6.202A {Saccharomyces cerevisiae}
11914 Probab=93.32 E-value=0.0027 Score=67.46 Aligned_cols=330 Identities=11% Similarity=0.063 Sum_probs=181.1 Template_Neff=8.900
11915
11916 Q NP_000290.2 290 CKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTN---KLETR---RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
11917 Q Consensus 290 ~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~---~~~ll---~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
11918 ..++.++.. .+.++...++.++..++...+ . ...++ ..+.++.++.++. . ++.++..++.+|..++...
11919 T Consensus 78 ~~li~LL~~~~~~d~~~~~l~~l~~ll~~~~-~~~~r~~~~~~~~~~~~~~li~lL~-~-d~~i~~~a~~~L~~L~~~~- 153 (478)
11920 T 5D80_H 78 IPLIHLLSTSDNEDCKKSVQNLIAELLSSDK-YGDDTVKFFQEDPKQLEQLFDVSLK-G-DFQTVLISGFNVVSLLVQN- 153 (478)
11921 T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHcCCC-CccchhHHhccChhhHHHHHHHHcC-C-CHHHHHHHHHHHHHHHHhc-
11922 Confidence 556666654 466777788888888876544 3 22233 2456778888886 5 6677888888888887654
11923
11924
11925 Q NP_000290.2 363 LK-EELIA-DALPV--LADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSAD 438 (747)
11926 Q Consensus 363 ~~-~~Lve-giLe~--Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (747)
11927 .. ..... ++++. ++.+|. ++ -++++-..|..||..-+. .+
11928 T Consensus 154 ~~~~~~~~~~~l~~~~li~~L~---------~~------~~~~~~~~a~~~L~~L~~---------------------~~ 197 (478)
11929 T 5D80_H 154 GLHNVKLVEKLLKNNNLINILQ---------NI------EQMDTCYVCIRLLQELAV---------------------IP 197 (478)
11930 T ss_pred cccCcccchhhcccchHHHHHh---------cc------CCccHHHHHHHHHHHHcC---------------------Ch
11931 Confidence 32 11122 66776 777761 11 123444555555533211 11
11932
11933
11934 Q NP_000290.2 439 AGRQTMRNY-SGLIDSLMAYVQNCVAA-----------SRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYT 506 (747)
11935 Q Consensus 439 ~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (747)
11936 ..|...... .|.|..|...+.+.... ...+..-..++...|.+|++
11937 T Consensus 198 ~~r~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~~~~~~~~~~~~ql~~~a~~~L~~Ls~---------------------- 255 (478)
11938 T 5D80_H 198 EYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTF---------------------- 255 (478)
11939 T ss_pred HHHHHHHHccccchHHHHHHHHhccccccccccccccCcCcCHHHHHHHHHHHHHHhc----------------------
11940 Confidence 122222221 34455555444432110 00111111222222233322
11941
11942
11943 Q NP_000290.2 507 EKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHS--DAIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMS 583 (747)
11944 Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~--G~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s 583 (747)
11945 +......+.+. ++++.|+.+++. .. +.++..++.+|.+++...+.
11946 T Consensus 256 -----------------------------~~~~~~~l~~~~~~~i~~Lv~ll~~-~~kekv~r~al~~L~nL~~~~~~-- 303 (478)
11947 T 5D80_H 256 -----------------------------NPVFANELVQKYLSDFLDLLKLVKI-TIKEKVSRLCISIILQCCSTRVK-- 303 (478)
11948 T ss_pred -----------------------------CHHHHHHHHHHhHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHhccChH--
11949 Confidence 00111223444 789999999984 44 67888899999999875321
11950
11951
11952 Q NP_000290.2 584 SG-MSQLIGLKEKGLPQIARLLQSG---NSDVVRSGASLLSNMSRH-------P------------------------LL 628 (747)
11953 Q Consensus 584 ~~-~~~~llie~giI~~Ll~LL~s~---d~eVr~~AL~aLsnLa~~-------~------------------------e~ 628 (747)
11954 .. .....+...+.+..++..|... +++++..+..++..+... + +.
11955 T Consensus 304 ~~~~~~~~l~~~~~~l~ll~~L~~~~~~d~~l~~~l~~l~~~L~~~~~~lss~dey~~el~sg~l~wsp~h~s~~f~~~n 383 (478)
11956 T 5D80_H 304 QHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYVAELDSKLLCWSPPHVDNGFWSDN 383 (478)
11957 T ss_pred hcHHHHHHHHHcCCHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHcCCCCCCCCcCCcChHHHh
11958 Confidence 00 0012333444344566666543 444544433333333100 0 01
11959
11960
11961 Q NP_000290.2 629 -HRVM--GNQVFPEVTRLLTSHTGNT----SNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
11962 Q Consensus 629 -~~ll--~~giI~~Ll~LL~s~s~~~----~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
11963 ..+. ..++++.|+.+|....... ..+..++..++..|++++...+.....+.+.++++.|+.++.+. ++.++
11964 T Consensus 384 ~~~~~~~~~~~l~~Lv~lL~~~~~~~~~~~~~~~~v~~~a~~~l~~lv~~~~~~~~~l~~~g~~~~L~~Ll~~~-~~~vr 462 (478)
11965 T 5D80_H 384 IDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELLNHS-DSRVK 462 (478)
11966 T ss_pred HHHhhhccHHHHHHHHHHHHhhhhCCCCCccccHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHhcCC-CHHHH
11967 Confidence 0111 2457788888886510000 01244577788899999665566666677778899999999877 88999
11968
11969
11970 Q NP_000290.2 702 EAARLLLSDMWSS 714 (747)
11971 Q Consensus 702 ~aAL~aLsnL~~~ 714 (747)
11972 ..|+.++.+++.+
11973 T Consensus 463 ~~Al~al~~l~~~ 475 (478)
11974 T 5D80_H 463 YEALKATQAIIGY 475 (478)
11975 T ss_pred HHHHHHHHHHHhh
11976 Confidence 9999999988754
11977
11978
11979 No 251
11980 >1F59_B IMPORTIN BETA-1/FXFG NUCLEOPORIN; Protein-protein complex, TRANSPORT PROTEIN RECEPTOR; 2.8A {Homo sapiens} SCOP: a.118.1.1
11981 Probab=93.26 E-value=0.0024 Score=62.21 Aligned_cols=154 Identities=10% Similarity=0.056 Sum_probs=84.6 Template_Neff=12.900
11982
11983 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLM------------SSGMSQLIG---LKEKGLPQIARLLQSG------ 607 (747)
11984 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~------------s~~~~~~ll---ie~giI~~Ll~LL~s~------ 607 (747)
11985 ++.++.++. +.++.++..++.++..++...... ......... .-..+++.+...+...
11986 T Consensus 261 ~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~ 339 (442)
11987 T 1F59_B 261 FAITIEAMK-SDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDD 339 (442)
11988 T ss_dssp HHHHHHHHH-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCCCCCS
11989 T ss_pred HHHHHHHhc-CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHHHHHHHHHccCCCCCCC
11990 Confidence 455666666 356677777888887776531000 000000000 0122344444444332
11991
11992
11993 Q NP_000290.2 608 -NSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSML 685 (747)
11994 Q Consensus 608 -d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL 685 (747)
11995 +..++..+..++..+...... .....+++.+...+.+ .++.++..++.++..+....+. ...... ..++
11996 T Consensus 340 ~~~~~r~~a~~~l~~l~~~~~~--~~~~~~~~~l~~~l~~------~~~~~r~~al~~l~~l~~~~~~~~~~~~~-~~~~ 410 (442)
11997 T 1F59_B 340 DDWNPCKAAGVCLMLLATCCED--DIVPHVLPFIKEHIKN------PDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAM 410 (442)
11998 T ss_dssp SCCCHHHHHHHHHHHHHHHSTT--THHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHTSSSCHHHHHHHH-HTTH
11999 T ss_pred CCCcHHHHHHHHHHHHHHhccc--ccHHhHHHHHHHHhcC------CChHHHHHHHHHHHHHHhCCCHHHHHHHH-HHHH
12000 Confidence 345667777777777654111 1112244445555544 3677888999999988865332 111111 2456
12001
12002
12003 Q NP_000290.2 686 NNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
12004 Q Consensus 686 ~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
12005 +.+...+.+. ++.++..++++|..++.
12006 T Consensus 411 ~~l~~~l~d~-~~~vr~~a~~~l~~l~~ 437 (442)
12007 T 1F59_B 411 PTLIELMKDP-SVVVRDTAAWTVGRICE 437 (442)
12008 T ss_dssp HHHHHHTTCS-CSHHHHHHHHHHHHHHH
12009 T ss_pred HHHHHHhcCC-CHHHHHHHHHHHHHHHH
12010 Confidence 6677777665 78899999999988764
12011
12012
12013 No 252
12014 >6XTE_A Importin-5, antipain; human karyopherin, PA-PB1 sub-complex nuclear; HET: FC0, OAR; 2.27A {Homo sapiens}
12015 Probab=93.23 E-value=0.0025 Score=70.44 Aligned_cols=153 Identities=9% Similarity=0.114 Sum_probs=85.8 Template_Neff=12.900
12016
12017 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
12018 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
12019 .++.+...+. +.++.++..++.++..++..... .... .-..+++.+...+.+.++.++..++.++..++.. .
12020 T Consensus 358 l~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 430 (1096)
12021 T 6XTE_A 358 IKEHIMQMLQ-NPDWKYRHAGLMALSAIGEGCHQ-----QMEG-ILNEIVNFVLLFLQDPHPRVRYAACNAVGQMATDFA 430 (1096)
12022 T ss_dssp HHHHHHHHHT-CSSHHHHHHHHHHHHHTHHHHTT-----TTTT-THHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHTT
12023 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhhHH-----HHHH-HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcc
12024 Confidence 3444555555 35677788888888887764221 0111 1134566677777777888999999999998865 2
12025
12026
12027 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINL--------CRSSA 696 (747)
12028 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~L--------L~s~~ 696 (747)
12029 .. .......+++.+...+.+. .+..++..++.+|..++...+. .....+ ..++..+... +.+.
12030 T Consensus 431 ~~~~~~~~~~~~~~l~~~l~~~-----~~~~v~~~a~~~l~~l~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~- 503 (1096)
12031 T 6XTE_A 431 PGFQKKFHEKVIAALLQTMEDQ-----GNQRVQAHAAAALINFTEDCPKSLLIPYL-DNLVKHLHSIMVLKLQELIQKG- 503 (1096)
12032 T ss_dssp THHHHHHHHHHHHHHHHHHHTC-----SCHHHHHHHHHHHHHHHHTSCHHHHGGGH-HHHHHHHHHHHHHHHHHHHHTC-
12033 T ss_pred HHHHHHHHHHHHHHHHHHhccc-----CCHHHHHHHHHHHHHHhccCCHHhHHHHH-HHHHHHHHHHHHHHHHHHHHcC-
12034 Confidence 11 1111233555566655541 2467788888888888764322 111111 1223333322 2222
12035
12036
12037 Q NP_000290.2 697 SPKAAEAARLLLSDMWSS 714 (747)
12038 Q Consensus 697 d~eVr~aAL~aLsnL~~~ 714 (747)
12039 +..++..++.++..++..
12040 T Consensus 504 ~~~~~~~~~~~l~~l~~~ 521 (1096)
12041 T 6XTE_A 504 TKLVLEQVVTSIASVADT 521 (1096)
12042 T ss_dssp CCHHHHHHHHHHHHHHHH
12043 T ss_pred CHhHHHHHHHHHHHHHHH
12044 Confidence 456677777777766643
12045
12046
12047 No 253
12048 >4HXT_A De Novo Protein OR329; Structural Genomics, PSI-Biology, Protein Structure; 1.95A {artificial gene}
12049 Probab=93.20 E-value=0.0025 Score=56.21 Aligned_cols=134 Identities=25% Similarity=0.298 Sum_probs=86.9 Template_Neff=13.200
12050
12051 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
12052 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
12053 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++..........
12054 T Consensus 87 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 166 (252)
12055 T 4HXT_A 87 GVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 166 (252)
12056 T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
12057 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHHH
12058 Confidence 44556666666677788888999988876543333333334567777777776677888889999988876543332333
12059
12060
12061 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
12062 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
12063 ...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.+..++.
12064 T Consensus 167 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 222 (252)
12065 T 4HXT_A 167 VDAGGVEVLVKLLT-STDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLT 222 (252)
12066 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHHHGGG
12067 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhc
12068 Confidence 33456777777776 55677888889999888864322 222223 56666666654
12069
12070
12071 No 254
12072 >5IFE_C Splicing factor 3B subunit 5; pre-mRNA splicing, U2 snRNP, essential; 3.1A {Homo sapiens}
12073 Probab=93.19 E-value=0.0029 Score=75.01 Aligned_cols=153 Identities=10% Similarity=0.044 Sum_probs=93.2 Template_Neff=9.800
12074
12075 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12076 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12077 +++.|...+. +.+..++..++.+|..++..... . .... ....++..|...+.+.++.++..++.+|..++....
12078 T Consensus 932 l~~~L~~~L~-~~~~~vR~~A~~~L~~l~~~~~~---~-~~~~-~~~~l~~~L~~~L~d~~~~vr~~al~aL~~l~~~~~ 1005 (1304)
12079 T 5IFE_C 932 ICGTVLWRLN-NKSAKVRQQAADLISRTAVVMKT---C-QEEK-LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 1005 (1304)
12080 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhccC---c-CHHH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhC
12081 Confidence 4566666676 46678888999999988754221 0 0011 123456677777777777888888888888876521
12082
12083
12084 Q NP_000290.2 628 L---HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
12085 Q Consensus 628 ~---~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
12086 . ...+ ..+++.|..++.+ .+..++..++.+|..++...+.....-.-..++..++..+.+. +..++..+
12087 T Consensus 1006 ~~~l~~~l-~~ll~~L~~~L~~------~~~~Vr~~ai~~L~~i~~~~~~~~~~~~~~~il~~Ll~~l~~~-~~~vr~~a 1077 (1304)
12088 T 5IFE_C 1006 MHKMTPPI-KDLLPRLTPILKN------RHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAH-KKAIRRAT 1077 (1304)
12089 T ss_pred hHHhcccH-HhHHHHHHHHhCC------CCHHHHHHHHHHHHHHHhcCcccCCHHHHHhhHHHHHHHccCC-CHHHHHHH
12090 Confidence 1 1112 2456666677665 3577888899999888764322111000012344455555544 66788888
12091
12092
12093 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
12094 Q Consensus 705 L~aLsnL~~~ 714 (747)
12095 +.+|..++..
12096 T Consensus 1078 ~~~L~~l~~~ 1087 (1304)
12097 T 5IFE_C 1078 VNTFGYIAKA 1087 (1304)
12098 T ss_pred HHHHHHHHHH
12099 Confidence 8888877653
12100
12101
12102 No 255
12103 >6AHD_1 Pre-mRNA-processing-splicing factor 8, Thioredoxin-like protein; Spliceosome, SPLICING; HET: IHP, GTP; 3.8A {Homo sapiens}
12104 Probab=93.19 E-value=0.0029 Score=75.01 Aligned_cols=153 Identities=10% Similarity=0.044 Sum_probs=93.2 Template_Neff=9.800
12105
12106 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12107 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12108 +++.|...+. +.+..++..++.+|..++..... . .... ....++..|...+.+.++.++..++.+|..++....
12109 T Consensus 932 l~~~L~~~L~-~~~~~vR~~A~~~L~~l~~~~~~---~-~~~~-~~~~l~~~L~~~L~d~~~~vr~~al~aL~~l~~~~~ 1005 (1304)
12110 T 6AHD_1 932 ICGTVLWRLN-NKSAKVRQQAADLISRTAVVMKT---C-QEEK-LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 1005 (1304)
12111 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhccC---c-CHHH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhC
12112 Confidence 4566666676 46678888999999988754221 0 0011 123456677777777777888888888888876521
12113
12114
12115 Q NP_000290.2 628 L---HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
12116 Q Consensus 628 ~---~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
12117 . ...+ ..+++.|..++.+ .+..++..++.+|..++...+.....-.-..++..++..+.+. +..++..+
12118 T Consensus 1006 ~~~l~~~l-~~ll~~L~~~L~~------~~~~Vr~~ai~~L~~i~~~~~~~~~~~~~~~il~~Ll~~l~~~-~~~vr~~a 1077 (1304)
12119 T 6AHD_1 1006 MHKMTPPI-KDLLPRLTPILKN------RHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAH-KKAIRRAT 1077 (1304)
12120 T ss_pred hHHhcccH-HhHHHHHHHHhCC------CCHHHHHHHHHHHHHHHhcCcccCCHHHHHhhHHHHHHHccCC-CHHHHHHH
12121 Confidence 1 1112 2456666677665 3577888899999888764322111000012344455555544 66788888
12122
12123
12124 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
12125 Q Consensus 705 L~aLsnL~~~ 714 (747)
12126 +.+|..++..
12127 T Consensus 1078 ~~~L~~l~~~ 1087 (1304)
12128 T 6AHD_1 1078 VNTFGYIAKA 1087 (1304)
12129 T ss_pred HHHHHHHHHH
12130 Confidence 8888877653
12131
12132
12133 No 256
12134 >6QH5_B AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
12135 Probab=93.12 E-value=0.0027 Score=64.56 Aligned_cols=146 Identities=10% Similarity=-0.008 Sum_probs=87.6 Template_Neff=12.900
12136
12137 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12138 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12139 +++.++..+....++.++..++.+|..+..... . ....++.+...+.+.+..++..++.++..+.....
12140 T Consensus 428 ~~~~l~~~l~~~~~~~vr~~a~~~l~~~~~~~~-------~----~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 496 (592)
12141 T 6QH5_B 428 IIATLCENLDSLDEPDARAAMIWIVGEYAERID-------N----ADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKP 496 (592)
12142 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCC-------C----hhhHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCC
12143 Confidence 556666666522456777788888887765311 0 13456667777777778899999999998876521
12144
12145
12146 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
12147 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
12148 .. +...+...+..++.+. .++.++..+..++..+.... ......+. ..++.++..+.+. ++.++..++.+
12149 T Consensus 497 ~~--~~~~l~~~l~~~~~~~-----~~~~vr~~a~~~l~~l~~~~-~~~~~~~~-~~~~~l~~~~~~~-~~~~~~~~~~~ 566 (592)
12150 T 6QH5_B 497 SE--TQELVQQVLSLATQDS-----DNPDLRDRGYIYWRLLSTDP-VTAKEVVL-SEKPLISEETDLI-EPTLLDELICH 566 (592)
12151 T ss_pred HH--hhhhhHHHHHHHcCCC-----CCHHHHHHHHHHHHHHhcCc-hhhHHHHH-hhHHHHHHHcCCC-CHHHHHHHHHH
12152 Confidence 10 1111222222323331 25678888888888876542 21112221 2356666666555 67888888888
12153
12154
12155 Q NP_000290.2 708 LSDMWSS 714 (747)
12156 Q Consensus 708 LsnL~~~ 714 (747)
12157 |..+...
12158 T Consensus 567 l~~l~~~ 573 (592)
12159 T 6QH5_B 567 IGSLASV 573 (592)
12160 T ss_pred HHHHHHH
12161 Confidence 8877653
12162
12163
12164 No 257
12165 >6EN4_C Splicing factor 3B subunit 3; Protein complex, splicing modulator, SPLICING; HET: BGZ; 3.08A {Homo sapiens}
12166 Probab=92.93 E-value=0.0031 Score=67.35 Aligned_cols=154 Identities=10% Similarity=0.023 Sum_probs=91.5 Template_Neff=12.900
12167
12168 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12169 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12170 .++.+...+. +.++.++..++.++..++..... . .... ....+++.+...+.+.++.++..++.++..++....
12171 T Consensus 480 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~ 553 (852)
12172 T 6EN4_C 480 ICGTVLWRLN-NKSAKVRQQAADLISRTAVVMKT---C-QEEK-LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 553 (852)
12173 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhChh---h-cCHH-HHHhHHHHHHHHccCCCHHHHHHHHHHHHHHHHhhC
12174 Confidence 4556666666 46677888899999888764221 0 0001 123566777777777778888889999988876521
12175
12176
12177 Q NP_000290.2 628 L--HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
12178 Q Consensus 628 ~--~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
12179 . .......+++.+...+.+ .++.++..++.++..++...+...........+..++..+.+. +..++..++
12180 T Consensus 554 ~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a~ 626 (852)
12181 T 6EN4_C 554 MHKMTPPIKDLLPRLTPILKN------RHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAH-KKAIRRATV 626 (852)
12182 T ss_pred chhchhhHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhhCHHHCCHHHHHhcHHHHHHHhcCC-CHHHHHHHH
12183 Confidence 1 111112355666666655 3567888888888888764322111000012344455555444 566777777
12184
12185
12186 Q NP_000290.2 706 LLLSDMWSS 714 (747)
12187 Q Consensus 706 ~aLsnL~~~ 714 (747)
12188 .++..+...
12189 T Consensus 627 ~~l~~l~~~ 635 (852)
12190 T 6EN4_C 627 NTFGYIAKA 635 (852)
12191 T ss_pred HHHHHHHHH
12192 Confidence 777777643
12193
12194
12195 No 258
12196 >6SA6_A DARPin-Armadillo fusion A5; protein fusion, DARPin, Armadillo, shared; HET: EDO; 1.6A {synthetic construct}
12197 Probab=92.89 E-value=0.0032 Score=61.05 Aligned_cols=112 Identities=26% Similarity=0.312 Sum_probs=76.5 Template_Neff=12.400
12198
12199 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
12200 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
12201 +++.+...+...++.++..++.+|.+++.........+...++++.+..++...+..++..++.++..++.........+
12202 T Consensus 284 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 363 (397)
12203 T 6SA6_A 284 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQKQAV 363 (397)
12204 T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
12205 T ss_pred hHHHHHHHhcCCcHHHHHHHHHHHHHHhcCcHHHHHHHHhcChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
12206 Confidence 45556666666667788888888888876544333334445677788888877777888899999998886434333334
12207
12208
12209 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
12210 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
12211 ...++++.+..++. ..++.++..++.++..++
12212 T Consensus 364 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 395 (397)
12213 T 6SA6_A 364 KEAGALEKLEQLQS-HENEKIQKEAQEALEKLQ 395 (397)
12214 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHH
12215 T ss_pred HHcCchHHHHHHHh-cccHHHHHHHHHHHHHHh
12216 Confidence 44456777777776 456677777887777665
12217
12218
12219 No 259
12220 >6FT5_A A3_A3; alphaRep, artificial protein, chimera, bidomain; HET: GOL, SO4; 1.94A {synthetic construct}
12221 Probab=92.89 E-value=0.0032 Score=60.70 Aligned_cols=91 Identities=14% Similarity=0.155 Sum_probs=53.6 Template_Neff=12.800
12222
12223 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
12224 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
12225 ..++.+...+.+.+..++..++..+..+.. ...++.+...+.+.++.++..++..+..+..
12226 T Consensus 23 ~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~-----------~~~~~~l~~~l~~~~~~vr~~a~~~L~~~~~-------- 83 (409)
12227 T 6FT5_A 23 EKVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD-------- 83 (409)
12228 T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHhcC-----------cchHHHHHHHhcCCCHHHHHHHHHHHHHHcC--------
12229 Confidence 445556666666667777777777766643 1234445555556666777777777766543
12230
12231
12232 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
12233 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
12234 ...++.+...+. +.++.++..++.++..+.
12235 T Consensus 84 ---~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~ 113 (409)
12236 T 6FT5_A 84 ---ERAVEPLIKALK-DEDGWVRQSAAVALGQIG 113 (409)
12237 T ss_pred ---chhHHHHHHHhc-CCCHHHHHHHHHHHHhhC
12238 Confidence 123344455554 445566666666666554
12239
12240
12241 No 260
12242 >3C5W_A PP2A A subunit, PP2A C; methylesterase, phosphatase, PP2A, HYDROLASE; 2.8A {Homo sapiens}
12243 Probab=92.86 E-value=0.0032 Score=54.65 Aligned_cols=146 Identities=11% Similarity=0.041 Sum_probs=96.0 Template_Neff=13.200
12244
12245 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12246 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12247 .++.+...+. +.++.++..++.++..++..... .. ....+++.+...+.+.++.++..++.++..+.....
12248 T Consensus 86 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-------~~-~~~~~~~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~ 156 (232)
12249 T 3C5W_A 86 LNSLCMAWLV-DHVYAIREAATSNLKKLVEKFGK-------EW-AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG 156 (232)
12250 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHCH-------HH-CCCCCHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHH
12251 T ss_pred HHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHhCh-------hH-HHhcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhC
12252 Confidence 4566666776 46677888899998888764221 11 123566777777777778888899999988876521
12253
12254
12255 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
12256 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
12257 .. .....+++.+...+.+ .++.++..++.++..+....+. ......+++.+..++.+. ++.++..++.+
12258 T Consensus 157 ~~-~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~---~~~~~~~~~~l~~~~~~~-~~~vr~~a~~~ 225 (232)
12259 T 3C5W_A 157 QD-ITTKHMLPTVLRMAGD------PVANVRFNVAKSLQKIGPILDN---STLQSEVKPILEKLTQDQ-DVDVKYFAQEA 225 (232)
12260 T ss_dssp HH-HHHHHTHHHHHHGGGC------SSHHHHHHHHHHHHHHGGGSCH---HHCCCCCHHHHHHHHTCS-SHHHHHHHHHH
12261 T ss_pred hh-ccHhcHHHHHHHHhCC------CcHHHHHHHHHHHHHHHHHcCc---hHHHHHHHHHHHHHHhcC-CHHHHHHHHHH
12262 Confidence 11 1122355666666665 3678888999999988764221 112234566777777765 77889989888
12263
12264
12265 Q NP_000290.2 708 LSDMWS 713 (747)
12266 Q Consensus 708 LsnL~~ 713 (747)
12267 |..++.
12268 T Consensus 226 l~~l~~ 231 (232)
12269 T 3C5W_A 226 LTVLSL 231 (232)
12270 T ss_dssp HHHTTC
12271 T ss_pred HHHHhc
12272 Confidence 887753
12273
12274
12275 No 261
12276 >4LAC_A Serine/threonine-protein phosphatase 2A activator (E.C.5.2.1.8); PP2A, PTPA, protein phosphatase, signaling; HET: AGS, MES; 2.82A {Homo sapiens}
12277 Probab=92.86 E-value=0.0033 Score=56.30 Aligned_cols=110 Identities=11% Similarity=0.093 Sum_probs=66.6 Template_Neff=12.800
12278
12279 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
12280 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
12281 ..+.++.|+..+. +.++.++..++.+|..+...... . . ....+++.+...+.+.++.++..++.+|..+..
12282 T Consensus 31 ~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~vr~~~~~~l~~~~~ 101 (258)
12283 T 4LAC_A 31 SLYPIAVLIDELR-NEDVQLRLNSIKKLSTIALALGV------E-R-TRSELLPFIVELAEDAKWRVRLAIIEYMPLLAG 101 (258)
12284 T ss_pred cccHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHccCH------H-H-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
12285 Confidence 3456777788887 46778888888888888754221 1 1 123456667777777777888888888887765
12286
12287
12288 Q NP_000290.2 625 HPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
12289 Q Consensus 625 ~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
12290 .... ......+++.+..++.+ .++.++..++.+|..++.
12291 T Consensus 102 ~~~~-~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~ 140 (258)
12292 T 4LAC_A 102 QLGV-EYFDEKLNSLCMAWLVD------HVYAIREAATSNLKKLVE 140 (258)
12293 T ss_pred hCCC-hHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
12294 Confidence 4111 00112234444455444 245666666666666654
12295
12296
12297 No 262
12298 >4FDD_A Transportin-1, RNA-binding protein FUS; HEAT repeats, Karyopherin, nuclear import; 2.3A {Homo sapiens}
12299 Probab=92.57 E-value=0.0039 Score=65.83 Aligned_cols=150 Identities=10% Similarity=0.046 Sum_probs=86.4 Template_Neff=13.300
12300
12301 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
12302 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
12303 .++.+...+. +.++.++..++.++..++..... .... ....+++.+...+.+.++.++..++.++..++.. .
12304 T Consensus 360 ~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~v~~~~~~~l~~~~~~~~ 432 (852)
12305 T 4FDD_A 360 ILPLLKELLF-HHEWVVKESGILVLGAIAEGCMQ-----GMIP-YLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVV 432 (852)
12306 T ss_dssp HHHHHHHHHT-CSSHHHHHHHHHHHHHTTTTTHH-----HHGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHH
12307 T ss_pred HHHHHHHHHh-CCChHHHHHHHHHHHHHHHHHHH-----hhHH-hHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhc
12308 Confidence 3444555555 35667777888888888764321 1111 1234666777777777788889999999888764 1
12309
12310
12311 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
12312 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
12313 .. .......+++.+...+.+ .++.++..++.++..++........... ..++..+...+.+. +..++..++
12314 T Consensus 433 ~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~~~~~~~ 504 (852)
12315 T 4FDD_A 433 SQPPDTYLKPLMTELLKRILD------SNKRVQEAACSAFATLEEEACTELVPYL-AYILDTLVFAFSKY-QHKNLLILY 504 (852)
12316 T ss_dssp HSCTTTTHHHHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHHGGGGGGGH-HHHHHHHHHHHHHC-CHHHHHHHH
12317 T ss_pred CCCCCcchHHHHHHHHHHHHc------CCHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHhhcc-CHHHHHHHH
12318 Confidence 11 011112344555555554 2567888888888888764322111111 23455555555544 445566666
12319
12320
12321 Q NP_000290.2 706 LLLSDMW 712 (747)
12322 Q Consensus 706 ~aLsnL~ 712 (747)
12323 .+|..++
12324 T Consensus 505 ~~l~~l~ 511 (852)
12325 T 4FDD_A 505 DAIGTLA 511 (852)
12326 T ss_dssp HHHHHHH
12327 T ss_pred HHHHHHH
12328 Confidence 6666665
12329
12330
12331 No 263
12332 >5NR4_A CLIP-associating protein 2; Microtubules, TOG domain, Tubulin, Structural; 1.198A {Homo sapiens}
12333 Probab=92.57 E-value=0.004 Score=54.44 Aligned_cols=148 Identities=8% Similarity=0.066 Sum_probs=97.5 Template_Neff=12.900
12334
12335 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12336 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12337 .++.+...+. +.++.++..++.++..++..... .... ....+++.+...+.+.+..++..++.++..++....
12338 T Consensus 53 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 125 (230)
12339 T 5NR4_A 53 TVDALTGWVG-SSNYRVSLMGLEILSAFVDRLST-----RFKS-YVAMVIVALIDRMGDAKDKVRDEAQTLILKLMDQVA 125 (230)
12340 T ss_dssp HHHHHHHHHH-CSSHHHHHHHHHHHHHHHHHHGG-----GGGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHTS
12341 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHhhH-----HHHH-HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHcCC
12342 Confidence 5566667776 46778888999999988764321 1111 123567777777777777888889999888875421
12343
12344
12345 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
12346 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
12347 . ...+++.+...+.+ .++.++..++.++..++........ ....+++.+...+.+. ++.++..++.+
12348 T Consensus 126 ~----~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~--~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 192 (230)
12349 T 5NR4_A 126 P----PMYIWEQLASGFKH------KNFRSREGVCLCLIETLNIFGAQPL--VISKLIPHLCILFGDS-NSQVRDAAILA 192 (230)
12350 T ss_dssp C----HHHHHHHHGGGGGC------SCHHHHHHHHHHHHHHHHHHCSTTS--CHHHHHHHHHHHTTCS-SHHHHHHHHHH
12351 T ss_pred C----HHHHHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHhCCCcc--cHHHHHHHHHHHHCCC-CHHHHHHHHHH
12352 Confidence 1 11244555555554 3677888889998888764322211 1124567777777766 78899999999
12353
12354
12355 Q NP_000290.2 708 LSDMWSSK 715 (747)
12356 Q Consensus 708 LsnL~~~~ 715 (747)
12357 +..+....
12358 T Consensus 193 l~~l~~~~ 200 (230)
12359 T 5NR4_A 193 IVEIYRHV 200 (230)
12360 T ss_dssp HHHHHHHH
12361 T ss_pred HHHHHHHH
12362 Confidence 98887543
12363
12364
12365 No 264
12366 >3C5W_A PP2A A subunit, PP2A C; methylesterase, phosphatase, PP2A, HYDROLASE; 2.8A {Homo sapiens}
12367 Probab=92.51 E-value=0.0041 Score=53.94 Aligned_cols=107 Identities=12% Similarity=0.133 Sum_probs=62.9 Template_Neff=13.200
12368
12369 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12370 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12371 .++.++..+. +.++.++..++..|..+...... . . ....+++.+...+.+.++.++..++.++..++....
12372 T Consensus 8 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~vr~~~~~~l~~l~~~~~ 78 (232)
12373 T 3C5W_A 8 PIAVLIDELR-NEDVQLRLNSIKKLSTIALALGV------E-R-LSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLG 78 (232)
12374 T ss_dssp HHHHHHHHHT-CSSHHHHHHHHTTHHHHHHHHCS------S-H-CCCCCHHHHHHHTTCSSHHHHHHHHTTHHHHHHHHC
12375 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhCh------H-H-HHHhHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhC
12376 Confidence 4566777776 46677888888888887754221 1 1 123556667777777777788888888887765411
12377
12378
12379 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
12380 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
12381 .. .....+++.+...+.+ .++.++..++.++..++.
12382 T Consensus 79 ~~-~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~ 114 (232)
12383 T 3C5W_A 79 VE-FFDEKLNSLCMAWLVD------HVYAIREAATSNLKKLVE 114 (232)
12384 T ss_dssp GG-GTTTTHHHHHHHHTTC------SSHHHHHHHHHHHHHHHH
12385 T ss_pred HH-HHHHHHHHHHHHHHhC------CCHHHHHHHHHHHHHHHH
12386 Confidence 10 1111234444444444 245566666666666554
12387
12388
12389 No 265
12390 >6XU2_A Importin-5, antipain; human karyopherin, PA-PB1 sub-complex nuclear; HET: FC0, OAR; 2.834A {Homo sapiens}
12391 Probab=92.50 E-value=0.0042 Score=68.79 Aligned_cols=152 Identities=9% Similarity=0.112 Sum_probs=85.0 Template_Neff=12.800
12392
12393 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
12394 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
12395 .++.+...+. +.++.++..++.++..++..... .... .-..+++.+...+.+.++.++..++.++..++.. .
12396 T Consensus 377 l~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 449 (1115)
12397 T 6XU2_A 377 IKEHIMQMLQ-NPDWKYRHAGLMALSAIGEGCHQ-----QMEG-ILNEIVNFVLLFLQDPHPRVRYAACNAVGQMATDFA 449 (1115)
12398 T ss_dssp HHHHHHHHHS-SSCSHHHHHHHHHHHHHHHHHHH-----HHTT-THHHHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTT
12399 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhhHH-----HHHH-HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcc
12400 Confidence 3444555555 35677788888888887764221 0111 1134566677777777888999999999988865 1
12401
12402
12403 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINL--------CRSSA 696 (747)
12404 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~L--------L~s~~ 696 (747)
12405 .. .......+++.+...+.+. .+..++..++.+|..++...+. .....+ ..++..+... +.+.
12406 T Consensus 450 ~~~~~~~~~~~~~~l~~~l~~~-----~~~~vr~~a~~~l~~l~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~- 522 (1115)
12407 T 6XU2_A 450 PGFQKKFHEKVIAALLQTMEDQ-----GNQRVQAHAAAALINFTEDCPKSLLIPYL-DNLVKHLHSIMVLKLQELIQKG- 522 (1115)
12408 T ss_dssp THHHHHHHHHHHHHHHHHHHTT-----CCHHHHHHHHHHHHHHHHTSCHHHHGGGH-HHHHHHHHHHHHHHHHHHHHTC-
12409 T ss_pred HHHHHHHHHHHHHHHHHHhccc-----CCHHHHHHHHHHHHHHhccCCHHhHHHHH-HHHHHHHHHHHHHHHHHHHHcC-
12410 Confidence 11 1111223555566555431 2567788888888888764322 111111 1223333322 2222
12411
12412
12413 Q NP_000290.2 697 SPKAAEAARLLLSDMWS 713 (747)
12414 Q Consensus 697 d~eVr~aAL~aLsnL~~ 713 (747)
12415 +..++..++.++..++.
12416 T Consensus 523 ~~~~~~~~~~~l~~l~~ 539 (1115)
12417 T 6XU2_A 523 TKLVLEQVVTSIASVAD 539 (1115)
12418 T ss_dssp CCHHHHHHHHHHHHHHH
12419 T ss_pred CHhHHHHHHHHHHHHHH
12420 Confidence 45566667777766654
12421
12422
12423 No 266
12424 >4LAC_A Serine/threonine-protein phosphatase 2A activator (E.C.5.2.1.8); PP2A, PTPA, protein phosphatase, signaling; HET: AGS, MES; 2.82A {Homo sapiens}
12425 Probab=92.46 E-value=0.0043 Score=55.46 Aligned_cols=146 Identities=11% Similarity=0.041 Sum_probs=96.3 Template_Neff=12.800
12426
12427 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12428 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12429 .++.+..++. +.++.++..++.+|..++..... .. ....+++.+...+.+.+..++..++.++..+.....
12430 T Consensus 112 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~-------~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 182 (258)
12431 T 4LAC_A 112 LNSLCMAWLV-DHVYAIREAATSNLKKLVEKFGK-------EW-AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG 182 (258)
12432 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHcCCh-------hH-HHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHHcCC
12433 Confidence 4566666776 46678888899999888764221 11 234567777777777778889999999888876521
12434
12435
12436 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
12437 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
12438 .. .....+++.+...+.+ .++.++..++.+|..+...... ......+++.+..++.+. ++.++..++.+
12439 T Consensus 183 ~~-~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 251 (258)
12440 T 4LAC_A 183 QD-ITTKHMLPTVLRMAGD------PVANVRFNVAKSLQKIGPILDN---STLQSEVKPILEKLTQDQ-DVDVKYFAQEA 251 (258)
12441 T ss_pred CC-ccHhhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhCc---chhHHHHHHHHHHHHCCC-CHHHHHHHHHH
12442 Confidence 11 1122355666666665 3678888999999888754221 112234566677777765 77888899888
12443
12444
12445 Q NP_000290.2 708 LSDMWS 713 (747)
12446 Q Consensus 708 LsnL~~ 713 (747)
12447 |..+..
12448 T Consensus 252 l~~l~~ 257 (258)
12449 T 4LAC_A 252 LTVLSL 257 (258)
12450 T ss_pred HHHHHh
12451 Confidence 887753
12452
12453
12454 No 267
12455 >6EN4_C Splicing factor 3B subunit 3; Protein complex, splicing modulator, SPLICING; HET: BGZ; 3.08A {Homo sapiens}
12456 Probab=92.45 E-value=0.0043 Score=66.18 Aligned_cols=147 Identities=10% Similarity=0.006 Sum_probs=89.0 Template_Neff=12.900
12457
12458 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
12459 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
12460 .+++.++..+. +.+..++..++.++..+....+. ....+ -..+++.+...+.+.+..++..++.++..+....
12461 T Consensus 675 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~ 747 (852)
12462 T 6EN4_C 675 TVLPALMNEYR-VPELNVQNGVLKSLSFLFEYIGE-----MGKDY-IYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGV 747 (852)
12463 T ss_pred hHHHHHHHHhC-CCCHHHHHHHHHHHHHHHhhCch-----hhHHH-HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHcC
12464 Confidence 35666777776 46677888899999888764321 01111 1356667777777777778888877777776541
12465
12466
12467 Q NP_000290.2 627 -LLH-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
12468 Q Consensus 627 -e~~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
12469 ... ......+++.+...+.+ .++.++..++.++..+...... ...++.+...+.+. ++.++..+
12470 T Consensus 748 ~~~~~~~~~~~~~~~l~~~~~~------~~~~~r~~~~~~l~~l~~~~~~-------~~~~~~l~~~l~~~-~~~vr~~a 813 (852)
12471 T 6EN4_C 748 YGFGCEDSLNHLLNYVWPNVFE------TSPHVIQAVMGALEGLRVAIGP-------CRMLQYCLQGLFHP-ARKVRDVY 813 (852)
12472 T ss_pred ccCCcHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhhCc-------cchHHHHHHHhCCC-cHHHHHHH
12473 Confidence 110 00111233333333333 2567777888888777643211 23455566666655 77889999
12474
12475
12476 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
12477 Q Consensus 705 L~aLsnL~~~ 714 (747)
12478 +.++..+...
12479 T Consensus 814 ~~~l~~l~~~ 823 (852)
12480 T 6EN4_C 814 WKIYNSIYIG 823 (852)
12481 T ss_pred HHHHHHHHhh
12482 Confidence 9998888754
12483
12484
12485 No 268
12486 >1QBK_B STRUCTURE OF THE KARYOPHERIN BETA2-RAN; HEAT REPEATS, NUCLEAR TRANSPORT PROTEIN; HET: GNP; 3.0A {Homo sapiens} SCOP: a.118.1.1
12487 Probab=92.44 E-value=0.0043 Score=66.06 Aligned_cols=151 Identities=10% Similarity=0.047 Sum_probs=89.7 Template_Neff=13.200
12488
12489 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
12490 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
12491 .++.+...+. +.++.++..++.++..++..... .... ....+++.+...+.+.++.++..++.++..++...
12492 T Consensus 398 ~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 470 (890)
12493 T 1QBK_B 398 ILPLLKELLF-HHEWVVKESGILVLGAIAEGCMQ-----GMIP-YLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVV 470 (890)
12494 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHhHh-----hhHh-hHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHc
12495 Confidence 3445555555 35677888888888888764321 1111 12346677777777778889999999999887651
12496
12497
12498 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
12499 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
12500 .. .......+++.+...+.+ .++.++..++.++..++........... ..+++.+...+.+. +..++..++
12501 T Consensus 471 ~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~~~~~~~ 542 (890)
12502 T 1QBK_B 471 SQPPDTYLKPLMTELLKRILD------SNKRVQEAACSAFATLEEEACTELVPYL-AYILDTLVFAFSKY-QHKNLLILY 542 (890)
12503 T ss_pred CCCCchhhHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHhhcc-CHHHHHHHH
12504 Confidence 11 111112345555555554 3567888889998888764322111111 23455555555544 455666666
12505
12506
12507 Q NP_000290.2 706 LLLSDMWS 713 (747)
12508 Q Consensus 706 ~aLsnL~~ 713 (747)
12509 .++..++.
12510 T Consensus 543 ~~l~~l~~ 550 (890)
12511 T 1QBK_B 543 DAIGTLAD 550 (890)
12512 T ss_pred HHHHHHHH
12513 Confidence 77666654
12514
12515
12516 No 269
12517 >6CRI_I Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
12518 Probab=92.43 E-value=0.0043 Score=62.06 Aligned_cols=145 Identities=10% Similarity=0.022 Sum_probs=87.2 Template_Neff=13.200
12519
12520 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12521 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12522 .++.++..+....++.++..++.+|..+..... . ....++.+...+.+.++.++..++.+|..+.....
12523 T Consensus 415 ~~~~l~~~l~~~~~~~~r~~a~~~l~~~~~~~~-------~----~~~~l~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 483 (570)
12524 T 6CRI_I 415 VIATLCENLDSLDEPEARAAMIWIVGEYAERID-------N----ADELLESFLEGFHDKSTQVQLQLLTAIVKLFLKKP 483 (570)
12525 T ss_dssp THHHHTSSCTTCCCHHHHHHHHHHHHHTTTTST-------T----HHHHHHHHTTSGGGSCSHHHHHHHHHHHHHHHHCT
12526 T ss_pred HHHHHHHchhhCCCHHHHHHHHHHHHHHHHhcc-------C----HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHhcCc
12527 Confidence 456666666522456777788888887765311 0 13456667777777778889999999988876521
12528
12529
12530 Q NP_000290.2 628 LHRVMGNQVFPEVTRL-LTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
12531 Q Consensus 628 ~~~ll~~giI~~Ll~L-L~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
12532 . . +.. .+..++.. +.+. .+..++..+..++..+.... ......+ ...++.++..+.+. ++.++..++.
12533 T Consensus 484 ~-~-~~~-~~~~~l~~~~~~~-----~~~~vr~~a~~~~~~l~~~~-~~~~~~~-~~~~~~l~~~l~~~-~~~~~~~~~~ 552 (570)
12534 T 6CRI_I 484 T-E-TQE-LVQQVLSLATQDS-----DNPDLRDRGYIYWRLLSTDP-VAAKEVV-LAEKPLISEETDLI-EPTLLDELIC 552 (570)
12535 T ss_dssp T-T-THH-HHHHHHCCCCCSC-----CCHHHHHHHHHHHHHHHHCH-HHHHHHT-SCCCCCCCCCCCCC-CHHHHHHHHS
12536 T ss_pred H-H-HHH-HHHHHHHHHhcCC-----CCchHHHHHHHHHHHhcCCh-HHHHHHH-HccCCCCCccccCC-chhHHHHHHH
12537 Confidence 1 0 111 12222222 3321 15678888888888776542 2111222 23466666666655 6788888888
12538
12539
12540 Q NP_000290.2 707 LLSDMWSS 714 (747)
12541 Q Consensus 707 aLsnL~~~ 714 (747)
12542 +|..++..
12543 T Consensus 553 ~l~~l~~~ 560 (570)
12544 T 6CRI_I 553 YIGTLASV 560 (570)
12545 T ss_dssp CSSBHHHH
12546 T ss_pred HhhcHHHH
12547 Confidence 88887754
12548
12549
12550 No 270
12551 >2RU4_B Armadillo Repeat Protein, N-terminal fragment; solenoid repeat, Armadillo repeat motif; NMR {synthetic construct}
12552 Probab=92.41 E-value=0.0045 Score=45.28 Aligned_cols=71 Identities=30% Similarity=0.361 Sum_probs=42.5 Template_Neff=12.400
12553
12554 Q NP_000290.2 287 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
12555 Q Consensus 287 ~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
12556 ++++.+...+...+..++..+++++.+++.........+...+.+..+...+. ..++.++..++.++.+++
12557 T Consensus 12 ~~~~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~ 82 (84)
12558 T 2RU4_B 12 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQS-HENEKIQKEAQEALEKLQ 82 (84)
12559 T ss_dssp TSHHHHHHHTTCSCHHHHHHHHHHHHHHHTCSSSTTHHHHHHTCHHHHHHHTT-SSCHHHHHHHHHHHHHHC
12560 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHh
12561 Confidence 45555666666556677788888888877653332223333445555665554 345566666777766654
12562
12563
12564 No 271
12565 >4L7M_A Putative uncharacterized protein; HEAT-repeats, Hypothetical, UNKNOWN FUNCTION; HET: MSE, GOL; 2.002A {Thermococcus onnurineus}
12566 Probab=92.32 E-value=0.0047 Score=55.57 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=52.1 Template_Neff=12.800
12567
12568 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
12569 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
12570 +.+.++.+...+. +.++.++..++.+|..+...... . .... .....++.|...+.+.++.++..++.+|..+..
12571 T Consensus 35 ~~~~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~ 108 (269)
12572 T 4L7M_A 35 DKRALFLILELAG-EDDETTRLRAFVALGEILKRADS---D-LRMM-VLERHLDVFINALSQENEKVTIKALRALGYLVK 108 (269)
12573 T ss_dssp CHHHHHHHHHHTT-SSCHHHHHHHHHHHHHHHTTSCH---H-HHHH-HHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHHT
12574 T ss_pred CcchHHHHHHHhC-CCCHHHHHHHHHHHHHHHhcCCH---H-HHHH-HHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
12575 Confidence 4467778888887 46778888999999888764211 0 0111 123567777888887788888889998888876
12576
12577
12578 Q NP_000290.2 625 H 625 (747)
12579 Q Consensus 625 ~ 625 (747)
12580 .
12581 T Consensus 109 ~ 109 (269)
12582 T 4L7M_A 109 D 109 (269)
12583 T ss_dssp T
12584 T ss_pred c
12585 Confidence 3
12586
12587
12588 No 272
12589 >5WBJ_A Regulatory-associated protein of TOR 1,Eukaryotic; Raptor, TOS, PROTEIN BINDING; 3.0A {Arabidopsis thaliana}
12590 Probab=92.23 E-value=0.0059 Score=72.68 Aligned_cols=100 Identities=11% Similarity=0.096 Sum_probs=68.1 Template_Neff=8.700
12591
12592 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLH----------- 629 (747)
12593 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~----------- 629 (747)
12594 ++.++..++.+|..|+...+. ........++++.|+.+|.+.+++++..++.+|++++......
12595 T Consensus 612 ~~~lr~~a~~~L~~L~~~~~~-----~~~~~~~~~~~~~L~~lL~~~~~~VRaaal~aL~~li~~~~~~~~~~~~~~~~~ 686 (1287)
12596 T 5WBJ_A 612 EPLFLQWLCLCLGKLWEDFME-----AQIMGREANAFEKLAPLLSEPQPEVRAAAVFALGTLLDIGFDSNKSVVEDEFDD 686 (1287)
12597 T ss_dssp CHHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTHHHHHGGGGGCSCHHHHHHHHHHHHHTCC------------CCCC
12598 T ss_pred CHHHHHHHHHHHHHHHhccHH-----HHHHHHHcCHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCccccccccCCCCCH
12599 Confidence 456667788888888765432 1233345678889999999889999999999999998762110
12600
12601
12602 Q NP_000290.2 630 ---RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
12603 Q Consensus 630 ---~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
12604 ..+..+++..|..++.+ .++.++..++.+|++++..
12605 T Consensus 687 ~~~~~~~~~i~~~l~~~~~D------~S~~VR~e~~~aLs~~~~~ 725 (1287)
12606 T 5WBJ_A 687 DEKIRAEDAIIKSLLDVVSD------GSPLVRAEVAVALARFAFG 725 (1287)
12607 T ss_dssp CHHHHHHHHHHHHHHTTTTC------SCHHHHHHHHHHHHHHHHH
12608 T ss_pred HHHHHHHHHHHHHHHHHccC------CCHHHHHHHHHHHHHHHHh
12609 Confidence 00233455566666655 3678889999999888754
12610
12611
12612 No 273
12613 >5WBK_A Regulatory-associated protein of TOR 1,Ribosomal; Raptor, TOS, PROTEIN BINDING; 3.11A {Arabidopsis thaliana}
12614 Probab=92.22 E-value=0.0059 Score=72.65 Aligned_cols=101 Identities=11% Similarity=0.093 Sum_probs=68.3 Template_Neff=8.700
12615
12616 Q NP_000290.2 560 KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLH---------- 629 (747)
12617 Q Consensus 560 ~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~---------- 629 (747)
12618 .++.++..++.+|..|+...+. ........++++.|+.+|.+.+++++..++.+|+.++......
12619 T Consensus 611 ~~~~lr~~a~~~L~~L~~~~~~-----~~~~~~~~~~~~~L~~lL~~~~~~VRaaal~AL~~li~~~~~~~~~~~~~~~~ 685 (1287)
12620 T 5WBK_A 611 PEPLFLQWLCLCLGKLWEDFME-----AQIMGREANAFEKLAPLLSEPQPEVRAAAVFALGTLLDIGFDSNKSVVEDEFD 685 (1287)
12621 T ss_dssp -CHHHHHHHHHHHHHHHTTCHH-----HHHHHHTTTHHHHHGGGGGCSCHHHHHHHHHHHHHHCC------------CCC
12622 T ss_pred CCHHHHHHHHHHHHHHHcccHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCccccccccCCCCC
12623 Confidence 3456677788888888765432 1233345678889999999888999999999999998762110
12624
12625
12626 Q NP_000290.2 630 ----RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
12627 Q Consensus 630 ----~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
12628 ..+..+++..|..++.+ .++.++..++.+|++++..
12629 T Consensus 686 ~~~~~~~~~~i~~~l~~~~~D------~s~~VR~e~~~als~~~~~ 725 (1287)
12630 T 5WBK_A 686 DDEKIRAEDAIIKSLLDVVSD------GSPLVRAEVAVALARFAFG 725 (1287)
12631 T ss_dssp CCHHHHHHHHHHHHHHTTTTC------SCHHHHHHHHHHHHHHHHH
12632 T ss_pred HHHHHHHHHHHHHHHHHHccC------CCHHHHHHHHHHHHHHHHh
12633 Confidence 01233455566666655 3678888899999888754
12634
12635
12636 No 274
12637 >2QK2_A LP04448p; Mini spindles, Msps, XMAP215, Dis1; 2.1A {Drosophila melanogaster}
12638 Probab=92.22 E-value=0.005 Score=54.55 Aligned_cols=145 Identities=9% Similarity=0.135 Sum_probs=94.6 Template_Neff=12.700
12639
12640 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH- 625 (747)
12641 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~- 625 (747)
12642 .++.+...+. +.++.++..++..|..+....+. .... .-..+++.+...+ .+.++.++..++.+|..+...
12643 T Consensus 16 l~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~ 88 (242)
12644 T 2QK2_A 16 MPKDFYDKLE-EKKWTLRKESLEVLEKLLTDHPK-----LENG-EYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGL 88 (242)
12645 T ss_dssp SCTTHHHHHT-CSSHHHHHHHHHHHHHHHHHCSS-----BCCC-CCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHH
12646 T ss_pred CCHHHHHHHh-ccchHHHHHHHHHHHHHHhhCcc-----cccc-hHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHh
12647 Confidence 4566777777 47788888999999988764321 1111 1134667777777 777788999999999988865
12648
12649
12650 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
12651 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
12652 ... .... ..+++.+...+.+ .+..++..++.+|..+....+ ....++.+...+.+. ++.++..+
12653 T Consensus 89 ~~~~~~~~-~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~-------~~~~~~~l~~~l~~~-~~~~r~~~ 153 (242)
12654 T 2QK2_A 89 AKRFSNYA-SACVPSLLEKFKE------KKPNVVTALREAIDAIYASTS-------LEAQQESIVESLSNK-NPSVKSET 153 (242)
12655 T ss_dssp GGGGHHHH-HHHHHHHHHGGGC------CCHHHHHHHHHHHHHHHTTSC-------HHHHHHHHHHHTTCS-CHHHHHHH
12656 T ss_pred hHhHHHHH-HhHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHcCC-CHHHHHHH
12657 Confidence 211 1111 2356666666665 356788888888888875421 112455566666655 67778888
12658
12659
12660 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
12661 Q Consensus 705 L~aLsnL~~~ 714 (747)
12662 +.++..++..
12663 T Consensus 154 ~~~l~~l~~~ 163 (242)
12664 T 2QK2_A 154 ALFIARALTR 163 (242)
12665 T ss_dssp HHHHHHHHTT
12666 T ss_pred HHHHHHHHHh
12667 Confidence 8887777653
12668
12669
12670 No 275
12671 >3W3U_A Importin subunit beta-3; HEAT repeat, nuclear import, PROTEIN; 2.6A {Saccharomyces cerevisiae}
12672 Probab=92.21 E-value=0.005 Score=67.54 Aligned_cols=115 Identities=14% Similarity=0.059 Sum_probs=64.9 Template_Neff=13.000
12673
12674 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
12675 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
12676 .+++.+...+.+.++.++..++.++..+...............+++.+...+. +.+..++..++.++..++........
12677 T Consensus 397 ~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~ 476 (1078)
12678 T 3W3U_A 397 KILDMVIPLINDPHPRVQYGCCKVLGQISTAFSPFIQRTAHDRILPALISKLTSECTSRVQTHAAAALVAFSEFASKDIL 476 (1078)
12679 T ss_dssp HHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHSSTTSCHHHHHHHHHHHHHHHTTCCHHHH
12680 T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCChhhh
12681 Confidence 34444455555566778888888888876543221111111234555555555 34566777788888777654322111
12682
12683
12684 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
12685 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
12686 ......++..+...+. ..++.++..++.++..++..
12687 T Consensus 477 ~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 512 (1078)
12688 T 3W3U_A 477 EPYLDSLLTNLLVLLQ-SNKLYVQEQALTTIAFIAEA 512 (1078)
12689 T ss_dssp GGGHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHH
12690 T ss_pred HHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHH
12691 Confidence 1111245555666665 44567778888888877754
12692
12693
12694 No 276
12695 >2IW3_B ELONGATION FACTOR 3A; ACETYLATION, ATP-BINDING, ELONGATION FACTOR, PROTEIN; HET: MSE, ADP, SO4; 2.4A {SACCHAROMYCES CEREVISIAE}
12696 Probab=92.03 E-value=0.0058 Score=68.10 Aligned_cols=148 Identities=16% Similarity=0.128 Sum_probs=74.2 Template_Neff=11.700
12697
12698 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12699 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12700 +++.|..++. +.+..++..|+.+|..++..... .. ....++.++..+.+.+. ...++..+..+.....
12701 T Consensus 176 i~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-------~~--~~~~~~~l~~~l~~~~~--~~~~~~~l~~~~~~~~ 243 (986)
12702 T 2IW3_B 176 LIPVLSETMW-DTKKEVKAAATAAMTKATETVDN-------KD--IERFIPSLIQCIADPTE--VPETVHLLGATTFVAE 243 (986)
12703 T ss_dssp HHHHHHHHTT-CSCHHHHHHHHHHHHHHGGGCCS-------ST--TGGGHHHHHHHHHCGGG--HHHHHHHHTTCCCCSC
12704 T ss_pred HHHHHHHhcC-cCCHHHHHHHHHHHHHHHHhcCc-------HH--HHHHHHHHHHHhcCccc--chHHHHHHHHchhhcc
12705 Confidence 5566667776 45667777888888777653211 11 12344455555543322 2222323222222110
12706
12707
12708 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK-QYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
12709 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~-~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
12710 ........+++.+...+.+ .++.++..++.++..++........ ......+++.|+.++.+..++.++..++.
12711 T Consensus 244 ~~~~~~~~~l~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~i~~~l~~~l~d~~d~~vr~~a~~ 317 (986)
12712 T 2IW3_B 244 VTPATLSIMVPLLSRGLNE------RETGIKRKSAVIIDNMCKLVEDPQVIAPFLGKLLPGLKSNFATIADPEAREVTLR 317 (986)
12713 T ss_dssp CCHHHHHHHHHHHHHHHTS------SSHHHHHHHHHHHHHHHTTCCCHHHHHHHHTTTHHHHHHHHHHCCCHHHHHHHHH
12714 T ss_pred cCHHHHHhHHHHHHHhccc------ccccccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHH
12715 Confidence 0000011245555555554 3567778888888877754211100 00112356666666665423677777777
12716
12717
12718 Q NP_000290.2 707 LLSDMWS 713 (747)
12719 Q Consensus 707 aLsnL~~ 713 (747)
12720 +|..+..
12721 T Consensus 318 ~l~~l~~ 324 (986)
12722 T 2IW3_B 318 ALKTLRR 324 (986)
12723 T ss_dssp HHHHHHH
12724 T ss_pred HHHHHHH
12725 Confidence 7777643
12726
12727
12728 No 277
12729 >4G3A_B CLIP-associating protein; TOG domain, HEAT repeat, MAP; HET: GOL; 1.994A {Drosophila melanogaster}
12730 Probab=91.94 E-value=0.0059 Score=54.01 Aligned_cols=150 Identities=10% Similarity=0.094 Sum_probs=93.1 Template_Neff=12.600
12731
12732 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
12733 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
12734 ..++.++..+. +.++.++..++..|..++..... . .... ....+++.+...+.+.++.++..++.++..++...
12735 T Consensus 7 ~~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~---~-~~~~-~~~~~~~~l~~~l~d~~~~v~~~a~~~l~~l~~~~ 80 (237)
12736 T 4G3A_B 7 SDLDGFIQQMP-KADMRVKVQLAEDLVTFLSDDTN---S-IVCT-DMGFLIDGLMPWLTGSHFKIAQKSLEAFSELIKRL 80 (237)
12737 T ss_dssp SSHHHHHHHST-TCCHHHHHHHHHHHHHHHHCTTS---C-CCCS-CHHHHHHHHGGGGSSSCHHHHHHHHHHHHHHHHHH
12738 T ss_pred chHHHHHHhcC-cCCHHHHHHHHHHHHHHhhCCCC---C-cccc-cHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHh
12739 Confidence 35666777777 46778888999999888764221 0 0111 12345677777777778889999999999988652
12740
12741
12742 Q NP_000290.2 627 L-LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNII-NLCRSSASPKAAEAA 704 (747)
12743 Q Consensus 627 e-~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll-~LL~s~~d~eVr~aA 704 (747)
12744 . ........+++.++..+.+ .+..++..++.+|..+........ ...++.+. .++.+. ++.++..+
12745 T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~~~~-----~~~~~~l~~~~l~~~-~~~~r~~a 148 (237)
12746 T 4G3A_B 81 GSDFNAYTATVLPHVIDRLGD------SRDTVREKAQLLLRDLMEHRVLPP-----QALIDKLATSCFKHK-NAKVREEF 148 (237)
12747 T ss_dssp GGGGGGTHHHHHHHHHHHHTC------SCHHHHHHHHHHHHHHHHTTSSCH-----HHHHHHHHHHHTTCS-CHHHHHHH
12748 T ss_pred hhhHHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHcCCCCH-----HHHHHHHHHHHhhCC-CHHHHHHH
12749 Confidence 1 1111112356666666655 356788888888888875311111 12345555 555544 56677777
12750
12751
12752 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
12753 Q Consensus 705 L~aLsnL~~~ 714 (747)
12754 +.++..++..
12755 T Consensus 149 ~~~l~~l~~~ 158 (237)
12756 T 4G3A_B 149 LQTIVNALHE 158 (237)
12757 T ss_dssp HHHHHHHHHH
12758 T ss_pred HHHHHHHHHH
12759 Confidence 7777776644
12760
12761
12762 No 278
12763 >5EWP_B Uncharacterized protein; translocation and attachment of rhoptries; 1.8A {Plasmodium falciparum Santa Lucia}
12764 Probab=91.92 E-value=0.0062 Score=55.67 Aligned_cols=176 Identities=16% Similarity=0.152 Sum_probs=134.6 Template_Neff=11.800
12765
12766 Q NP_000290.2 528 CPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDAT----------------LEACAGALQNLTASK--GLMSSGMSQL 589 (747)
12767 Q Consensus 528 ~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eV----------------r~~AL~aL~nLs~~s--~~~s~~~~~~ 589 (747)
12768 +-+++++++++.+..+++.|+++.|+.+|.. .+... +..++++|.+++... +. ...
12769 T Consensus 7 ~~~~~~~~~~~~~~~~~~~g~i~~L~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-----~~~ 80 (252)
12770 T 5EWP_B 7 KLLSFTSNDILRFDKAYDENDVQEFVNLCSS-TCEIEKLEDRMHPWAADPKTIGALSATQLAILASKENEPH-----YKD 80 (252)
12771 T ss_dssp --CCCCCHHHHHHHHHHHTTCHHHHHHHTTC-CCBCCCC--CCCSSSCCCCBHHHHHHHHHHHHHTCTTCTH-----HHH
12772 T ss_pred HHHhccHHHHhhhHHHHhcCCHHHHHHHhcC-CChHHHHHHHhhhhhCCHHHHHHHHHHHHHHHhcCCCCHH-----HHH
12773 Confidence 4456899999999999999999999999983 33222 236888888888652 21 244
12774
12775
12776 Q NP_000290.2 590 IGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRN 667 (747)
12777 Q Consensus 590 llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsn 667 (747)
12778 .+.+.++++.|+.++...++.++..++++|.+++.. ... ..+...++++.++.++.. .++.++..++++|.+
12779 T Consensus 81 ~~~~~g~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~ 154 (252)
12780 T 5EWP_B 81 AIREANGIAVFINLLKSHELDRVHAAVVALSFLSVDNVKNCICMFESGALPYLISGMKS------NIDGMKAACAQTCRN 154 (252)
12781 T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTCHHHHHHHTTC------SCHHHHHHHHHHHHH
12782 T ss_pred HHHHcccHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHhhC------CCHHHHHHHHHHHHH
12783 Confidence 445778999999999888888999999999999986 443 344556788888888875 367889999999999
12784
12785
12786 Q NP_000290.2 668 LMASQPQLAKQYFSSSMLNNIINLCRSSASP-------KAAEAARLLLSDMWSSKE 716 (747)
12787 Q Consensus 668 La~~s~e~~~~Lve~giL~~Ll~LL~s~~d~-------eVr~aAL~aLsnL~~~~~ 716 (747)
12788 ++...+.....+.+.++++.|+.++... +. .++..++.+|.+++...+
12789 T Consensus 155 l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~a~~~l~~l~~~~~ 209 (252)
12790 T 5EWP_B 155 IFVLDKKYKKEFLKLGGITQLVNLLELP-SNYDDSQPLYTQLEAIYHLEDFILNDG 209 (252)
12791 T ss_dssp HHTTCHHHHHHHHHTTHHHHHHHTTSCC-TTCCSCSCCHHHHHHHHHHHHHHEETT
12792 T ss_pred HHhcCHHHHHHHHHCChHHHHHHHhcCC-CCCCCCchHHHHHHHHHHHHHHHhcCC
12793 Confidence 9875455666677778889999988765 33 378889999999987665
12794
12795
12796 No 279
12797 >4QMI_B Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG domain; 1.9A {Homo sapiens}
12798 Probab=91.92 E-value=0.006 Score=54.09 Aligned_cols=147 Identities=7% Similarity=-0.004 Sum_probs=97.2 Template_Neff=12.600
12799
12800 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12801 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12802 .++.+...+. +.++.++..++.++..++..... .... .....++.++..+.+.+..++..++.++..+.....
12803 T Consensus 60 ~~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 132 (240)
12804 T 4QMI_B 60 LPTALKGRLN-DSNKILVQQTLNILQQLAVAMGP-----NIKQ-HVKNLGIPIITVLGDSKNNVRAAALATVNAWAEQTG 132 (240)
12805 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHGG-----GGGG-GCCCCCHHHHHHTTCSSHHHHHHHHHHHHHHHHHHC
12806 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhcH-----HHHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC
12807 Confidence 4566666676 46778888999999988764321 1111 123466777777777778888889999888875421
12808
12809
12810 Q NP_000290.2 628 LHRVMGNQVF--PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
12811 Q Consensus 628 ~~~ll~~giI--~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
12812 . ..++ +.+...+.+ .++.++..++.+|..++...... ... -..+++.+...+.+. +..++..++
12813 T Consensus 133 ~-----~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~-~~~-~~~~~~~l~~~l~~~-~~~vr~~a~ 198 (240)
12814 T 4QMI_B 133 M-----KEWLEGEDLSEELKK------ENPFLRQELLGWLAEKLPTLRST-PTD-LILCVPHLYSCLEDR-NGDVRKKAQ 198 (240)
12815 T ss_dssp S-----HHHHSSSHHHHHHTS------CCHHHHHHHHHHHHHHGGGCSSC-CGG-GGGGHHHHHHHTTCS-SHHHHHHHH
12816 T ss_pred h-----hHhccHHHHHHHHhc------CCHHHHHHHHHHHHHHHHhCCCC-cHH-HHHHHHHHHHHHhcC-CHHHHHHHH
12817 Confidence 1 1234 555666655 36788888999998877543221 111 124567777777766 788999999
12818
12819
12820 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
12821 Q Consensus 706 ~aLsnL~~~~ 715 (747)
12822 .++..+....
12823 T Consensus 199 ~~l~~l~~~~ 208 (240)
12824 T 4QMI_B 199 DALPFFMMHL 208 (240)
12825 T ss_dssp HHHHHHHHHH
12826 T ss_pred HHHHHHHHHh
12827 Confidence 9998887653
12828
12829
12830 No 280
12831 >4QMJ_A Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG DOMAIN; 2.498A {Homo sapiens}
12832 Probab=91.92 E-value=0.006 Score=54.09 Aligned_cols=147 Identities=7% Similarity=-0.004 Sum_probs=97.2 Template_Neff=12.600
12833
12834 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12835 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12836 .++.+...+. +.++.++..++.++..++..... .... .....++.++..+.+.+..++..++.++..+.....
12837 T Consensus 60 ~~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 132 (240)
12838 T 4QMJ_A 60 LPTALKGRLN-DSNKILVQQTLNILQQLAVAMGP-----NIKQ-HVKNLGIPIITVLGDSKNNVRAAALATVNAWAEQTG 132 (240)
12839 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHGG-----GGGG-GCCCCCHHHHHGGGCSSHHHHHHHHHHHHHHHHHHC
12840 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhcH-----HHHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC
12841 Confidence 4566666676 46778888999999988764321 1111 123466777777777778888889999888875421
12842
12843
12844 Q NP_000290.2 628 LHRVMGNQVF--PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
12845 Q Consensus 628 ~~~ll~~giI--~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
12846 . ..++ +.+...+.+ .++.++..++.+|..++...... ... -..+++.+...+.+. +..++..++
12847 T Consensus 133 ~-----~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~-~~~-~~~~~~~l~~~l~~~-~~~vr~~a~ 198 (240)
12848 T 4QMJ_A 133 M-----KEWLEGEDLSEELKK------ENPFLRQELLGWLAEKLPTLRST-PTD-LILCVPHLYSCLEDR-NGDVRKKAQ 198 (240)
12849 T ss_dssp S-----HHHHSSSHHHHHHHS------SCHHHHHHHHHHHHHHGGGCSCC-CGG-GGGGHHHHHHHTTCS-SHHHHHHHH
12850 T ss_pred h-----hHhccHHHHHHHHhc------CCHHHHHHHHHHHHHHHHhCCCC-cHH-HHHHHHHHHHHHhcC-CHHHHHHHH
12851 Confidence 1 1234 555666655 36788888999998877543221 111 124567777777766 788999999
12852
12853
12854 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
12855 Q Consensus 706 ~aLsnL~~~~ 715 (747)
12856 .++..+....
12857 T Consensus 199 ~~l~~l~~~~ 208 (240)
12858 T 4QMJ_A 199 DALPFFMMHL 208 (240)
12859 T ss_dssp HTHHHHHHHH
12860 T ss_pred HHHHHHHHHh
12861 Confidence 9998887653
12862
12863
12864 No 281
12865 >5XAH_A Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
12866 Probab=91.84 E-value=0.0062 Score=58.52 Aligned_cols=153 Identities=14% Similarity=0.074 Sum_probs=87.5 Template_Neff=12.900
12867
12868 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNMSRHP 626 (747)
12869 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsnLa~~~ 626 (747)
12870 +++.+...+. +.++.++..++.+|..++..... ....+ -..+++.+...+. +.++.++..++.++..++...
12871 T Consensus 235 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~~-~~~i~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~ 307 (416)
12872 T 5XAH_A 235 LLPVLLSTAQ-EADPEVRSNAIFGMGVLAEHGGH-----PAQEH-FPKLLGLLFPLLARERHDRVRDNICGALARLLMAS 307 (416)
12873 T ss_dssp HHHHHHHHTS-CSSHHHHHHHHHHHHHHHHHHHH-----HHHTT-HHHHHHHHTTHHHHCCCHHHHHHHHHHHHHHHHHC
12874 T ss_pred HHHHHHHHhh-cCCHHHHHHHHHHHHHHHHhcCc-----hHHhh-HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhC
12875 Confidence 4556666666 35677888888888888764321 11111 1346677777777 567788999999999888652
12876
12877
12878 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA-SPKAAEAAR 705 (747)
12879 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~-d~eVr~aAL 705 (747)
12880 .... ....+++.+...+... ......+. ++.++..+....+......+ ..+++.+...+.+.. ...++..++
12881 T Consensus 308 ~~~~-~~~~~~~~l~~~l~~~----~~~~~~~~-~~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~~~~~~~r~~~~ 380 (416)
12882 T 5XAH_A 308 PTRK-PEPQVLAALLHALPLK----EDLEEWVT-IGRLFSFLYQSSPDQVIDVA-PELLRICSLILADNKIPPDTKAALL 380 (416)
12883 T ss_dssp CSSC-CCHHHHHHHHHHCSCC----SCTTHHHH-HHHHHHHHHHHCSTTGGGSH-HHHHHTGGGTSSCTTSCHHHHHHHH
12884 T ss_pred CCCC-CHHHHHHHHHHhCCCC----CchhhHHH-HHHHHHHHHhcCchHHHhhH-HHHHHHHHHHHcCCCCCHHHHHHHH
12885 Confidence 1110 1123455555555221 01344555 77777777764332211111 134555666555431 235778888
12886
12887
12888 Q NP_000290.2 706 LLLSDMWSS 714 (747)
12889 Q Consensus 706 ~aLsnL~~~ 714 (747)
12890 .++..+...
12891 T Consensus 381 ~~l~~l~~~ 389 (416)
12892 T 5XAH_A 381 LLLTFLAKQ 389 (416)
12893 T ss_dssp HHHHHHHHH
12894 T ss_pred HHHHHHHHh
12895 Confidence 888877643
12896
12897
12898 No 282
12899 >5XAH_C Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
12900 Probab=91.84 E-value=0.0062 Score=58.52 Aligned_cols=153 Identities=14% Similarity=0.074 Sum_probs=87.3 Template_Neff=12.900
12901
12902 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNMSRHP 626 (747)
12903 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsnLa~~~ 626 (747)
12904 +++.+...+. +.++.++..++.+|..++..... ....+ -..+++.+...+. +.++.++..++.++..++...
12905 T Consensus 235 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~~-~~~i~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~ 307 (416)
12906 T 5XAH_C 235 LLPVLLSTAQ-EADPEVRSNAIFGMGVLAEHGGH-----PAQEH-FPKLLGLLFPLLARERHDRVRDNICGALARLLMAS 307 (416)
12907 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHSHH-----HHHTT-HHHHHHHHTHHHHHCCCHHHHHHHHHHHHHHHHTS
12908 T ss_pred HHHHHHHHhh-cCCHHHHHHHHHHHHHHHHhcCc-----hHHhh-HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhC
12909 Confidence 4556666666 35677888888888888764321 11111 1346677777777 567788999999999888652
12910
12911
12912 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA-SPKAAEAAR 705 (747)
12913 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~-d~eVr~aAL 705 (747)
12914 .... ....+++.+...+... ......+. ++.++..+....+......+ ..+++.+...+.+.. ...++..++
12915 T Consensus 308 ~~~~-~~~~~~~~l~~~l~~~----~~~~~~~~-~~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~~~~~~~r~~~~ 380 (416)
12916 T 5XAH_C 308 PTRK-PEPQVLAALLHALPLK----EDLEEWVT-IGRLFSFLYQSSPDQVIDVA-PELLRICSLILADNKIPPDTKAALL 380 (416)
12917 T ss_dssp CC---CCHHHHHHHHHHCSCC----SCGGGHHH-HHHHHHHHHHHCHHHHTTTH-HHHHHHHHHHHSCTTSCHHHHHHHH
12918 T ss_pred CCCC-CHHHHHHHHHHhCCCC----CchhhHHH-HHHHHHHHHhcCchHHHhhH-HHHHHHHHHHHcCCCCCHHHHHHHH
12919 Confidence 1110 1123455555555221 01344555 77777777764332211111 134555666555431 235778888
12920
12921
12922 Q NP_000290.2 706 LLLSDMWSS 714 (747)
12923 Q Consensus 706 ~aLsnL~~~ 714 (747)
12924 .++..+...
12925 T Consensus 381 ~~l~~l~~~ 389 (416)
12926 T 5XAH_C 381 LLLTFLAKQ 389 (416)
12927 T ss_dssp HHHHHHHHH
12928 T ss_pred HHHHHHHHh
12929 Confidence 888877643
12930
12931
12932 No 283
12933 >2QK1_A Protein STU2; stu2, Stu2p, XMAP215, Dis1, TOG; 1.7A {Saccharomyces cerevisiae}
12934 Probab=91.81 E-value=0.0063 Score=53.79 Aligned_cols=152 Identities=9% Similarity=0.052 Sum_probs=95.7 Template_Neff=12.900
12935
12936 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQN-LTASKGLMSSGMSQ--LIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMS 623 (747)
12937 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~n-Ls~~s~~~s~~~~~--~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa 623 (747)
12938 .++.+...+. +.++.++..++..|.. ++..... .. .. ....+++.+...+ .+.++.++..++.++..++
12939 T Consensus 17 l~~~l~~~l~-~~~~~~r~~a~~~l~~~l~~~~~~-----~~~~~~-~~~~~~~~l~~~l~~d~~~~vr~~a~~~l~~l~ 89 (249)
12940 T 2QK1_A 17 LPKDFQERIT-SSKWKDRVEALEEFWDSVLSQTKK-----LKSTSQ-NYSNLLGIYGHIIQKDANIQAVALAAQSVELIC 89 (249)
12941 T ss_dssp SCTTHHHHHT-CSSHHHHHHHHHHHHHHTGGGCCC-----BCCTTC-CCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
12942 T ss_pred CCHHHHHHHh-CCCHHHHHHHHHHHHHHHHhcCCC-----cCCCCc-cHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
12943 Confidence 4556666676 4677888899999998 7754221 01 01 1245677777888 7778889999999999888
12944
12945
12946 Q NP_000290.2 624 RH-PL-LHR-VMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL-AKQYFSSSMLNNIINLCRSSASPK 699 (747)
12947 Q Consensus 624 ~~-~e-~~~-ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~-~~~Lve~giL~~Ll~LL~s~~d~e 699 (747)
12948 .. .. ... .....+++.++..+.+ .+..++..++.++..+....+.. ..... ..+++.+...+.+. ++.
12949 T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~ 161 (249)
12950 T 2QK1_A 90 DKLKTPGFSKDYVSLVFTPLLDRTKE------KKPSVIEAIRKALLTICKYYDPLASSGRN-EDMLKDILEHMKHK-TPQ 161 (249)
12951 T ss_dssp HHHCTTTSCHHHHHHHHHHHHHGGGC------CCHHHHHHHHHHHHHHHHHSCTTCTTCTT-HHHHHHHHHHTTCS-SHH
12952 T ss_pred HHcCCCCCCHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhChhcccCCH-HHHHHHHHHHhCCC-CHH
12953 Confidence 65 22 111 1122355666666655 35678888888888887542210 00111 23566666666655 677
12954
12955
12956 Q NP_000290.2 700 AAEAARLLLSDMWSS 714 (747)
12957 Q Consensus 700 Vr~aAL~aLsnL~~~ 714 (747)
12958 ++..++.++..+...
12959 T Consensus 162 vr~~~~~~l~~~~~~ 176 (249)
12960 T 2QK1_A 162 IRMECTQLFNASMKE 176 (249)
12961 T ss_dssp HHHHHHHHHHHHHHH
12962 T ss_pred HHHHHHHHHHHHHHh
12963 Confidence 888888888777654
12964
12965
12966 No 284
12967 >5H2V_A Importin subunit beta-3, Ubiquitin-like-specific protease; nuclear import, PROTEIN TRANSPORT-HYDROLASE complex; 2.8A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
12968 Probab=91.79 E-value=0.0063 Score=66.66 Aligned_cols=114 Identities=16% Similarity=0.088 Sum_probs=64.4 Template_Neff=13.000
12969
12970 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
12971 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
12972 +++.+...+.+.++.++..++.++..+...............+++.+...+.+ .+..++..++.++..++.........
12973 T Consensus 398 ~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 477 (1078)
12974 T 5H2V_A 398 ILDMVIPLINDPHPRVQYGCCNVLGQISTDFSPFIQRTAHDRILPALISKLTSECTSRVQTHAAAALVNFSEFASKDILE 477 (1078)
12975 T ss_dssp HHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTSTTSCHHHHHHHHHHHHHHHTTCCHHHHG
12976 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhhccHHHHHHHHHhHHHHHHHHcccCCCHHHHHHHHHHHHHHHhcCChhhHH
12977 Confidence 34444445555566778888888887765432211101113455555555554 45677788888888777543221101
12978
12979
12980 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
12981 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
12982 .....++..+...+. ..++.++..++.++..++..
12983 T Consensus 478 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 512 (1078)
12984 T 5H2V_A 478 PYLDSLLTNLLVLLQ-SNKLYVQEQALTTIAFIAEA 512 (1078)
12985 T ss_dssp GGHHHHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHH
12986 T ss_pred HHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHH
12987 Confidence 111245555666654 44566778888888877654
12988
12989
12990 No 285
12991 >6OWT_A AP-2 complex subunit alpha, AP-2; AP, HIV, Nef, trafficking, Protein;{Rattus norvegicus}
12992 Probab=91.69 E-value=0.0072 Score=67.72 Aligned_cols=142 Identities=13% Similarity=0.056 Sum_probs=80.2 Template_Neff=11.000
12993
12994 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSD--VVRSGASLLSNMSRH 625 (747)
12995 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~e--Vr~~AL~aLsnLa~~ 625 (747)
12996 .++.++.++. +.+..++..++.++..+...... ....+++.+...+.+.+.. ++..++++|+.+...
12997 T Consensus 442 ~~~~l~~~l~-~~~~~v~~~a~~~l~~i~~~~~~----------~~~~~~~~l~~~l~~~~~~~~v~~~a~~~L~~~~~~ 510 (939)
12998 T 6OWT_A 442 YVDTILNLIR-IAGDYVSEEVWYRVIQIVINRDD----------VQGYAAKTVFEALQAPACHENLVKVGGYILGEFGNL 510 (939)
12999 T ss_pred HHHHHHHHhC-CCChhcCHHHHHHHHHHHhcCHH----------HHHhHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHh
13000 Confidence 5666777776 35556777777777776643211 1234556666667654444 778888888877654
13001
13002
13003 Q NP_000290.2 626 P-LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC---RSSASPKAA 701 (747)
13004 Q Consensus 626 ~-e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL---~s~~d~eVr 701 (747)
13005 . .........++..|...+.. .+..++..++.+|..++...+.. ...+..++..+ .+. +.+++
13006 T Consensus 511 ~~~~~~~~~~~~~~~L~~~l~~------~~~~vr~~al~aL~~l~~~~~~~------~~~i~~ll~~l~~~~~~-d~evr 577 (939)
13007 T 6OWT_A 511 IAGDPRSSPLIQFNLLHSKFHL------CSVPTRALLLSTYIKFVNLFPEV------KATIQDVLRSDSQLKNA-DVELQ 577 (939)
13008 T ss_pred cCCCCCCCHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhChhh------HhHHHHHHHHhcccCCC-CHHHH
13009 Confidence 1 11100111244455555554 25677888888888887643221 12334444433 333 66777
13010
13011
13012 Q NP_000290.2 702 EAARLLLSDMWS 713 (747)
13013 Q Consensus 702 ~aAL~aLsnL~~ 713 (747)
13014 ..++.++..+..
13015 T Consensus 578 ~~a~~~l~~l~~ 589 (939)
13016 T 6OWT_A 578 QRAVEYLRLSTV 589 (939)
13017 T ss_pred HHHHHHHHHHcC
13018 Confidence 777777766553
13019
13020
13021 No 286
13022 >2P8Q_A Importin beta-1 subunit, Snurportin-1; HEAT repeat, IBB-domain, Importin, Karyopherin; 2.35A {Homo sapiens} SCOP: a.118.1.1
13023 Probab=91.69 E-value=0.0066 Score=64.52 Aligned_cols=160 Identities=8% Similarity=0.007 Sum_probs=89.0 Template_Neff=13.100
13024
13025 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG--NSDVVRSGASLLSNMSRH 625 (747)
13026 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~--d~eVr~~AL~aLsnLa~~ 625 (747)
13027 .++.++..+..+.++.++..++.+|..++..... ....+ -..+++.+...+.+. ++.++..++.++..++..
13028 T Consensus 650 ~~~~l~~~l~~~~~~~vr~~~~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~~~v~~~a~~~l~~l~~~ 723 (876)
13029 T 2P8Q_A 650 FKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQS-----NIIPF-CDEVMQLLLENLGNENVHRSVKPQILSVFGDIALA 723 (876)
13030 T ss_dssp HHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHGG-----GGHHH-HHHHHHHHHHHTSCSSSCTTHHHHHHHHHHHHHHH
13031 T ss_pred HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhh-----cchHh-HHHHHHHHHHHHcCcCcccchHhHHHHHHHHHHHH
13032 Confidence 3455555555225667888888888888754221 01111 135677777777766 678888999999888865
13033
13034
13035 Q NP_000290.2 626 -PLL-HRVMGNQVFPEVTRLLTSHTG-----NTSNSEDILSSACYTVRNLMASQPQLAKQYFS-----SSMLNNIINLCR 693 (747)
13036 Q Consensus 626 -~e~-~~ll~~giI~~Ll~LL~s~s~-----~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve-----~giL~~Ll~LL~ 693 (747)
13037 ... ..++ ..+++.+...+..... ....+..++..++.++..++.........+.. ...++.++..+.
13038 T Consensus 724 ~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 802 (876)
13039 T 2P8Q_A 724 IGGEFKKYL-EVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFID 802 (876)
13040 T ss_dssp HGGGGHHHH-HHHHHHHHHHHSCCCCTTCSTTHHHHHHHHHHHHHHHHHHHHHHSCSSCSCCCGGGGTGGGHHHHHHHHH
13041 T ss_pred hchhhHHHH-HHHHHHHHHHHHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCchhhHHHhHHHHHHHHH
13042 Confidence 211 1111 2345555555443100 00014667888888888887621111111100 011444444443
13043
13044
13045 Q NP_000290.2 694 ------SSASPKAAEAARLLLSDMWSSK 715 (747)
13046 Q Consensus 694 ------s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
13047 +. +..++..++.++..++..-
13048 T Consensus 803 ~~~~~~~~-~~~v~~~~~~~l~~l~~~~ 829 (876)
13049 T 2P8Q_A 803 HIAGDEDH-TDGVVACAAGLIGDLCTAF 829 (876)
13050 T ss_dssp HHHHSSCC-CHHHHHHHHHHHHHHHHHH
13051 T ss_pred HHhCCCCC-ChhHHHHHHHHHHHHHHHh
13052 Confidence 33 5778888888888877543
13053
13054
13055 No 287
13056 >5MFO_F YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: CA, EDO; 1.3A {synthetic construct}
13057 Probab=91.65 E-value=0.0068 Score=51.30 Aligned_cols=157 Identities=18% Similarity=0.285 Sum_probs=121.2 Template_Neff=13.100
13058
13059 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
13060 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
13061 .+.++.++..+. +.++.++..++..|.+++...+. ....+.+.++++.|..++.+.++.++..++++|.+++..
13062 T Consensus 3 ~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~ 76 (202)
13063 T 5MFO_F 3 GSELPQMVQQLN-SPDQQELQSALRKLSQIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG 76 (202)
13064 T ss_dssp CTTHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS
13065 T ss_pred CchHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCChH-----HHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHhcC
13066 Confidence 456788888887 47778888999999999875332 233445678899999999988889999999999999976
13067
13068
13069 Q NP_000290.2 626 -PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
13070 Q Consensus 626 -~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
13071 ... ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+.+.++++.+..++.+. +..++..
13072 T Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~ 149 (202)
13073 T 5MFO_F 77 GNEQIQAVIDAGALPALVQLLSS------PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP-NEQILQE 149 (202)
13074 T ss_dssp CHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHH
13075 T ss_pred CHHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCC-CHHHHHH
13076 Confidence 333 334455678888888866 3678888999999999876455555556667888888888866 7888999
13077
13078
13079 Q NP_000290.2 704 ARLLLSDMWSSK 715 (747)
13080 Q Consensus 704 AL~aLsnL~~~~ 715 (747)
13081 ++.+|.+++...
13082 T Consensus 150 ~~~~l~~l~~~~ 161 (202)
13083 T 5MFO_F 150 ALWALSNIASGG 161 (202)
13084 T ss_dssp HHHHHHHHTTSC
13085 T ss_pred HHHHHHHHhcCh
13086 Confidence 999999998765
13087
13088
13089 No 288
13090 >5MFO_E YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: EDO, CA; 1.3A {synthetic construct}
13091 Probab=91.58 E-value=0.007 Score=51.19 Aligned_cols=157 Identities=18% Similarity=0.285 Sum_probs=120.0 Template_Neff=13.100
13092
13093 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
13094 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
13095 .+.++.++..+. +.++.++..++..|.+++...+. ....+.+.++++.|..++.+.++.++..++++|.+++..
13096 T Consensus 3 ~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~ 76 (202)
13097 T 5MFO_E 3 GSELPQMVQQLN-SPDQQELQSALRKLSQIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG 76 (202)
13098 T ss_dssp --CHHHHHHHTT-CSSHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS
13099 T ss_pred CchHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCChH-----HHHHHHHCChHHHHHHHhhCCCHHHHHHHHHHHHHHhcC
13100 Confidence 456788888887 47778888999999999875332 233445678899999999988889999999999999976
13101
13102
13103 Q NP_000290.2 626 -PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
13104 Q Consensus 626 -~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
13105 +.. ..+...++++.+...+.+ .++.++..++.+|.+++...+.....+.+.++++.+..++.+. +..++..
13106 T Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~ 149 (202)
13107 T 5MFO_E 77 GNEQIQAVIDAGALPALVQLLSS------PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP-NEQILQE 149 (202)
13108 T ss_dssp CHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHH
13109 T ss_pred CHHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCC-CHHHHHH
13110 Confidence 333 333455678888888866 3678888999999999876455555555667888888888876 7888999
13111
13112
13113 Q NP_000290.2 704 ARLLLSDMWSSK 715 (747)
13114 Q Consensus 704 AL~aLsnL~~~~ 715 (747)
13115 ++.+|.+++...
13116 T Consensus 150 ~~~~l~~l~~~~ 161 (202)
13117 T 5MFO_E 150 ALWALSNIASGG 161 (202)
13118 T ss_dssp HHHHHHHHHTSC
13119 T ss_pred HHHHHHHHhcCH
13120 Confidence 999999998765
13121
13122
13123 No 289
13124 >2QNA_A Importin subunit beta-1, Snurportin-1; Nuclear transport, import of spliceosomal; HET: SO4; 2.84A {Homo sapiens}
13125 Probab=91.50 E-value=0.0073 Score=62.82 Aligned_cols=159 Identities=8% Similarity=0.020 Sum_probs=86.8 Template_Neff=13.200
13126
13127 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG--NSDVVRSGASLLSNMSRH 625 (747)
13128 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~--d~eVr~~AL~aLsnLa~~ 625 (747)
13129 .++.+...+....++.++..++.++..++..... ....+ -..+++.+...+.+. ++.++..++.++..++..
13130 T Consensus 525 ~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~-~~~i~~~l~~~l~~~~~~~~v~~~~~~~l~~l~~~ 598 (762)
13131 T 2QNA_A 525 FKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQS-----NIIPF-CDEVMQLLLENLGNENVHRSVKPQILSVFGDIALA 598 (762)
13132 T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHH-----cchHh-HHhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
13133 Confidence 4555665565224567788888888888754221 01111 135667777777765 567888899999888765
13134
13135
13136 Q NP_000290.2 626 -PLL-HRVMGNQVFPEVTRLLTSHTGN-----TSNSEDILSSACYTVRNLMASQPQLAKQYFS-----SSMLNNIINLCR 693 (747)
13137 Q Consensus 626 -~e~-~~ll~~giI~~Ll~LL~s~s~~-----~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve-----~giL~~Ll~LL~ 693 (747)
13138 ... ..++ ..+++.+...+...... ...+..++..++.++..++...+.....+.. ...++.++.++.
13139 T Consensus 599 ~~~~~~~~~-~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 677 (762)
13140 T 2QNA_A 599 IGGEFKKYL-EVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFID 677 (762)
13141 T ss_pred hhcchHHHH-HHHHHHHHHHHcCCCCCCCcccCCCCHHHHHHHHHHHHHHHHhCCCCCcCccccHHHHHhHHHHHHHHHH
13142 Confidence 211 1111 23445555554421000 0014566778888888887642221111100 011344444443
13143
13144
13145 Q NP_000290.2 694 ------SSASPKAAEAARLLLSDMWSS 714 (747)
13146 Q Consensus 694 ------s~~d~eVr~aAL~aLsnL~~~ 714 (747)
13147 +. +..++..++.+|..++..
13148 T Consensus 678 ~~~~~~~~-~~~~~~~a~~~l~~l~~~ 703 (762)
13149 T 2QNA_A 678 HIAGDEDH-TDGVVACAAGLIGDLCTA 703 (762)
13150 T ss_pred HHcCCCCC-CHHHHHHHHHHHHHHHHH
13151 Confidence 22 467788888888887754
13152
13153
13154 No 290
13155 >6G4J_B Probable serine/threonine-protein kinase YabT (E.C.2.7.11.1); Bacterial Hanks-type protein kinase, complex; 1.599A {Bacillus subtilis (strain 168)}
13156 Probab=91.47 E-value=0.008 Score=50.62 Aligned_cols=132 Identities=14% Similarity=0.147 Sum_probs=85.5 Template_Neff=11.300
13157
13158 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13159 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13160 ..+.+++++. +.++.++..++..+..+.. ...++.+..++.+.++.++..++.++..+...
13161 T Consensus 15 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~-- 75 (148)
13162 T 6G4J_B 15 KVEMYIKNLQ-DDSAVVRDYAAAALGKIGD----------------ERAVEPLIKALKDEDEYVRQSAAWALGEIGDE-- 75 (148)
13163 T ss_pred cHHHHHHHhc-CCCHHHHHHHHHHHHhhCC----------------HHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCH--
13164 Confidence 4566777777 4667777777777765532 12344556667677788888888888877542
13165
13166
13167 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
13168 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
13169 ..++.+...+.+ .++.++..++.++..+... ..++.+..++.+. ++.++..++.+
13170 T Consensus 76 -------~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a~~~ 130 (148)
13171 T 6G4J_B 76 -------RAVEPLIKALKD------EDPSVRLTAAEALGQIGGE-----------RVRAAMEKLAETG-TGFARKVAVNY 130 (148)
13172 T ss_pred -------HHHHHHHHHhcC------CCHHHHHHHHHHHHhhCCH-----------HHHHHHHHHhcCC-CHHHHHHHHHH
13173 Confidence 234455555554 3567888888888876531 2344555566555 67888999999
13174
13175
13176 Q NP_000290.2 708 LSDMWSSKELQGVLRQ 723 (747)
13177 Q Consensus 708 LsnL~~~~~~~~~~~~ 723 (747)
13178 |..+........-+++
13179 T Consensus 131 L~~~~~~~~~~~~~~~ 146 (148)
13180 T 6G4J_B 131 LETHKSLISGGGGSGG 146 (148)
13181 T ss_pred HHhhCCCChHhccccc
13182 Confidence 9888766555444443
13183
13184
13185 No 291
13186 >3W3W_A Importin subunit beta-3, Protein STE12; HEAT repeat, nuclear import, PROTEIN; 2.2A {Saccharomyces cerevisiae}
13187 Probab=91.29 E-value=0.0081 Score=65.72 Aligned_cols=98 Identities=9% Similarity=0.152 Sum_probs=58.6 Template_Neff=13.000
13188
13189 Q NP_000290.2 609 SDVVRSGASLLSNMSRHPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLN 686 (747)
13190 Q Consensus 609 ~eVr~~AL~aLsnLa~~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~ 686 (747)
13191 ..++..++.++..++.... . .... ..+++.+...+.+ .++.++..++.+|..++...+...... ...+++
13192 T Consensus 821 ~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~------~~~~~r~~a~~~l~~l~~~~~~~~~~~-~~~~~~ 892 (1078)
13193 T 3W3W_A 821 EDLLDEINKSIAAVLKTTNGHYLKNL-ENIWPMINTFLLD------NEPILVIFALVVIGDLIQYGGEQTASM-KNAFIP 892 (1078)
13194 T ss_dssp HHHHHHHHHHHHHHHHHHTTTHHHHH-GGGHHHHHHHHC--------CHHHHHHHHHHHHHHHTC--CCCHHH-HHHHHH
13195 T ss_pred HHHHHHHHHHHHHHHHhcccchHHHH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhcchhhHHH-HHhHHH
13196 Confidence 3455666677776665411 1 1111 2345556666554 356788888899988876432221111 124567
13197
13198
13199 Q NP_000290.2 687 NIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
13200 Q Consensus 687 ~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
13201 .+...+.+. ++.++..++.+|..++...
13202 T Consensus 893 ~l~~~l~~~-~~~vr~~a~~~l~~l~~~~ 920 (1078)
13203 T 3W3W_A 893 KVTECLISP-DARIRQAASYIIGVCAQYA 920 (1078)
13204 T ss_dssp HHHHHHTCS-CHHHHHHHHHHHHHHHHHS
13205 T ss_pred HHHHHhcCC-CHHHHHHHHHHHHHHHHHC
13206 Confidence 777777766 7889999999998888653
13207
13208
13209 No 292
13210 >3ND2_A Importin subunit beta-1; importin, karyopherin, nuclear import, receptor; 2.4A {Saccharomyces cerevisiae}
13211 Probab=91.23 E-value=0.0083 Score=63.25 Aligned_cols=152 Identities=13% Similarity=0.136 Sum_probs=86.1 Template_Neff=13.300
13212
13213 Q NP_000290.2 548 AIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
13214 Q Consensus 548 ~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
13215 .++.+...+.. .+ ..++..++.++..++..... .... .-..+++.+...+.+.++.++..++.++..++..
13216 T Consensus 598 ~~~~l~~~l~~-~~~~~v~~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~ 670 (861)
13217 T 3ND2_A 598 LMGLFFRLLEK-KDSAFIEDDVFYAISALAASLGK-----GFEK-YLETFSPYLLKALNQVDSPVSITAVGFIADISNSL 670 (861)
13218 T ss_dssp HHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHHGG-----GGGG-GHHHHHHHHHHHHTCTTSTHHHHHHHHHHHHHHHH
13219 T ss_pred HHHHHHHHHhc-CCCchhHHHHHHHHHHHHHHhhh-----hHHH-HHHhHHHHHHHHHcCCCchHHHHHHHHHHHHHHHc
13220 Confidence 45555666652 33 55777888888887754221 0111 1235677777777777778888999999988865
13221
13222
13223 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASP------ 698 (747)
13224 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~------ 698 (747)
13225 +.. .... ..+++.+...+... ..+..++..++.++..++...+....... ..+++.+...+... ..
13226 T Consensus 671 ~~~~~~~~-~~~~~~l~~~l~~~----~~~~~~r~~a~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~-~~~~~~~~ 743 (861)
13227 T 3ND2_A 671 EEDFRRYS-DAMMNVLAQMISNP----NARRELKPAVLSVFGDIASNIGADFIPYL-NDIMALCVAAQNTK-PENGTLEA 743 (861)
13228 T ss_dssp TTSSHHHH-HHHHHHHHHHHHCT----TCCTTHHHHHHHHHHHHHHHHGGGGGGGH-HHHHHHHHHHHTCC-CSSSSHHH
13229 T ss_pred chhhHHhH-HHHHHHHHHHHhCc----chhhhhHHHHHHHHHHHHHHcchhcHHHH-HHHHHHHHHHHccC-CCCCCHHH
13230 Confidence 211 1111 23555555555541 01467788888999888765332111111 23455555555433 21
13231
13232
13233 Q NP_000290.2 699 -----KAAEAARLLLSDMWS 713 (747)
13234 Q Consensus 699 -----eVr~aAL~aLsnL~~ 713 (747)
13235 .++..++.++..++.
13236 T Consensus 744 ~~~~~~~~~~~l~~l~~~~~ 763 (861)
13237 T 3ND2_A 744 LDYQIKVLEAVLDAYVGIVA 763 (861)
13238 T ss_dssp HHHHHHHHHHHHHHHHHHHH
13239 T ss_pred HHHHHHHHHHHHHHHHHHHH
13240 Confidence 455566666655443
13241
13242
13243 No 293
13244 >5OWU_A Importin subunit beta-1, Nucleoporin NUP1; nuclear transport, TRANSPORT PROTEIN; 2.0A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
13245 Probab=91.23 E-value=0.0083 Score=63.25 Aligned_cols=152 Identities=13% Similarity=0.136 Sum_probs=86.1 Template_Neff=13.300
13246
13247 Q NP_000290.2 548 AIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
13248 Q Consensus 548 ~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
13249 .++.+...+.. .+ ..++..++.++..++..... .... .-..+++.+...+.+.++.++..++.++..++..
13250 T Consensus 598 ~~~~l~~~l~~-~~~~~v~~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~ 670 (861)
13251 T 5OWU_A 598 LMGLFFRLLEK-KDSAFIEDDVFYAISALAASLGK-----GFEK-YLETFSPYLLKALNQVDSPVSITAVGFIADISNSL 670 (861)
13252 T ss_dssp HHHHHHHHHHS-TTGGGTHHHHHHHHHHHHHHHGG-----GGGG-GHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHHHHS
13253 T ss_pred HHHHHHHHHhc-CCCchhHHHHHHHHHHHHHHhhh-----hHHH-HHHhHHHHHHHHHcCCCchHHHHHHHHHHHHHHHc
13254 Confidence 45555666652 33 55777888888887754221 0111 1235677777777777778888999999988865
13255
13256
13257 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASP------ 698 (747)
13258 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~------ 698 (747)
13259 +.. .... ..+++.+...+... ..+..++..++.++..++...+....... ..+++.+...+... ..
13260 T Consensus 671 ~~~~~~~~-~~~~~~l~~~l~~~----~~~~~~r~~a~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~-~~~~~~~~ 743 (861)
13261 T 5OWU_A 671 EEDFRRYS-DAMMNVLAQMISNP----NARRELKPAVLSVFGDIASNIGADFIPYL-NDIMALCVAAQNTK-PENGTLEA 743 (861)
13262 T ss_dssp GGGGHHHH-HHHHHHHHHHHTCT----TCCTTHHHHHHHHHHHHHHHHGGGGHHHH-HHHHHHHHHHHTCC-CSSSSHHH
13263 T ss_pred chhhHHhH-HHHHHHHHHHHhCc----chhhhhHHHHHHHHHHHHHHcchhcHHHH-HHHHHHHHHHHccC-CCCCCHHH
13264 Confidence 211 1111 23555555555541 01467788888999888765332111111 23455555555433 21
13265
13266
13267 Q NP_000290.2 699 -----KAAEAARLLLSDMWS 713 (747)
13268 Q Consensus 699 -----eVr~aAL~aLsnL~~ 713 (747)
13269 .++..++.++..++.
13270 T Consensus 744 ~~~~~~~~~~~l~~l~~~~~ 763 (861)
13271 T 5OWU_A 744 LDYQIKVLEAVLDAYVGIVA 763 (861)
13272 T ss_dssp HHHHHHHHHHHHHHHHHHHH
13273 T ss_pred HHHHHHHHHHHHHHHHHHHH
13274 Confidence 455566666655443
13275
13276
13277 No 294
13278 >5DFZ_B Vacuolar protein sorting-associated protein 38; Vps34, Vps15, Vps30, Vps38, Autophagy; 4.4A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
13279 Probab=90.97 E-value=0.011 Score=70.63 Aligned_cols=159 Identities=14% Similarity=0.083 Sum_probs=104.1 Template_Neff=9.900
13280
13281 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATL-EACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL---QSGNSDVVRSGASLLSN 621 (747)
13282 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr-~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL---~s~d~eVr~~AL~aLsn 621 (747)
13283 ..+++.|+.+|. +.++.++ ..|+.+|..+...... ......+...++++.|+.+| .+.++.++..++.+|..
13284 T Consensus 463 ~~~i~~L~~~l~-d~~~~vR~~~a~~~L~~l~~~~~~---~~~~~~~~~~~~lp~Li~~L~~~~d~~~~vr~~aa~~l~~ 538 (1460)
13285 T 5DFZ_B 463 DRVVPYFVCCFE-DSDQDVQALSLLTLIQVLTSVRKL---NQLNENIFVDYLLPRLKRLLISNRQNTNYLRIVFANCLSD 538 (1460)
13286 T ss_pred ccchHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCCCc---cCCccccCcCChHHHHHHHHHhccCCCHHHHHHHHHHHHH
13287 Confidence 457888999998 5788888 8999999988764221 00011223467899999999 88889999999999998
13288
13289
13290 Q NP_000290.2 622 MSRHP--L-----------L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNN 687 (747)
13291 Q Consensus 622 La~~~--e-----------~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~ 687 (747)
13292 +.... . . ...+..++++.+..++...- ...++.++..|+.+|..|+...... .....+++.
13293 T Consensus 539 ~~~~~~~~~l~~l~~~~~~~~~~~l~~~~~~~l~~ll~~~l--~d~~~~VR~~A~~aL~~l~~~~~~~---~~~~~~l~~ 613 (1460)
13294 T 5DFZ_B 539 LAIIINRFQEFTFAQHCNDNSSTKYSAKLIQSVEDLTVSFL--TDNDTYVKMALLQNILPLCKFFGRE---RTNDIILSH 613 (1460)
13295 T ss_pred HHHHcCHHHHHHHHHhcccChhHHHHcChHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHhcccccc---ccHHhHHHH
13296 Confidence 85430 0 0 01122234444444433200 0036789999999999987542111 111356778
13297
13298
13299 Q NP_000290.2 688 IINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
13300 Q Consensus 688 Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
13301 |+.++.+. ++.+|..|+.+|..+...
13302 T Consensus 614 Li~ll~d~-~~~VR~~a~~aL~~i~~~ 639 (1460)
13303 T 5DFZ_B 614 LITYLNDK-DPALRVSLIQTISGISIL 639 (1460)
13304 T ss_pred HHHHhcCC-CHHHHHHHHHHHHHHHhh
13305 Confidence 88888776 788888888888888763
13306
13307
13308 No 295
13309 >3W3U_A Importin subunit beta-3; HEAT repeat, nuclear import, PROTEIN; 2.6A {Saccharomyces cerevisiae}
13310 Probab=90.68 E-value=0.011 Score=64.69 Aligned_cols=157 Identities=9% Similarity=0.025 Sum_probs=84.5 Template_Neff=13.000
13311
13312 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13313 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13314 +++.++..+..+.+..++..++.+|..++..... . .... .-..+++.+...+.+.++.++..++.+|..++....
13315 T Consensus 440 ~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~ 514 (1078)
13316 T 3W3U_A 440 ILPALISKLTSECTSRVQTHAAAALVAFSEFASK---D-ILEP-YLDSLLTNLLVLLQSNKLYVQEQALTTIAFIAEAAK 514 (1078)
13317 T ss_dssp HHHHHHHHSSTTSCHHHHHHHHHHHHHHHTTCCH---H-HHGG-GHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHG
13318 T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCh---h-hhHH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhH
13319 Confidence 4555666665224566777888888888764221 0 0111 123566677777777778888899999988876521
13320
13321
13322 Q NP_000290.2 628 -LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR---SSASPKAAEA 703 (747)
13323 Q Consensus 628 -~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~---s~~d~eVr~a 703 (747)
13324 ........+++.+...+.... ..++.++..++.++..+................++.+..++. +. +..++..
13325 T Consensus 515 ~~~~~~~~~~~~~l~~~l~~~~---~~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~ 590 (1078)
13326 T 3W3U_A 515 NKFIKYYDTLMPLLLNVLKVNN---KDNSVLKGKCMECATLIGFAVGKEKFHEHSQELISILVALQNSDIDE-DDALRSY 590 (1078)
13327 T ss_dssp GGGGGGHHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHTSSCCC-CHHHHHH
13328 T ss_pred HhHHHHHhhHHHHHHHHHhcCC---CCcchHHHHHHHHHHHHHHHHCHHHhHHHHHHHHHHHHHHhcCCCCC-CHHHHHH
13329 Confidence 111111234555555554310 014567777888888776532111100011123444444444 23 4566777
13330
13331
13332 Q NP_000290.2 704 ARLLLSDMWS 713 (747)
13333 Q Consensus 704 AL~aLsnL~~ 713 (747)
13334 ++.++..++.
13335 T Consensus 591 ~~~~l~~l~~ 600 (1078)
13336 T 3W3U_A 591 LEQSWSRICR 600 (1078)
13337 T ss_dssp HHHHHHHHHH
13338 T ss_pred HHHHHHHHHH
13339 Confidence 7777766654
13340
13341
13342 No 296
13343 >1QGR_A IMPORTIN BETA SUBUNIT, IMPORTIN ALPHA-2; TRANSPORT RECEPTOR, NUCLEAR IMPORT, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.1
13344 Probab=90.57 E-value=0.011 Score=62.78 Aligned_cols=113 Identities=11% Similarity=0.140 Sum_probs=66.6 Template_Neff=13.000
13345
13346 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL-E 324 (747)
13347 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~-~ 324 (747)
13348 +++.+...+.+.++.++..++.++..++..............+++.+...+.+.+..++..++.++..++........ .
13349 T Consensus 367 ~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~ 446 (876)
13350 T 1QGR_A 367 VLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAIND 446 (876)
13351 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCHHhcHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCChhhcCC
13352 Confidence 344444555556677788888888887764322111111234556666666666778888899998888764432110 1
13353
13354
13355 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
13356 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
13357 .....+++.+...+. + ++.++..++.++..+...
13358 T Consensus 447 ~~~~~~~~~l~~~l~-~-~~~v~~~a~~~l~~l~~~ 480 (876)
13359 T 1QGR_A 447 VYLAPLLQCLIEGLS-A-EPRVASNVCWAFSSLAEA 480 (876)
13360 T ss_pred chHHHHHHHHHHHhc-C-CHHHHHHHHHHHHHHHHH
13361 Confidence 112245566666665 3 566777777777777653
13362
13363
13364 No 297
13365 >4QMH_A LP04448p; PROTEIN BINDING, TOG DOMAIN; 1.652A {Drosophila melanogaster}
13366 Probab=90.39 E-value=0.012 Score=51.77 Aligned_cols=149 Identities=9% Similarity=0.047 Sum_probs=95.9 Template_Neff=12.700
13367
13368 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13369 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13370 .++.+...+. +.++.++..++.++..++..... .... .-..+++.+...+.+.+..++..++.+|..++....
13371 T Consensus 58 ~~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 130 (241)
13372 T 4QMH_A 58 LAPALAHRLV-DSNAKIAQTTLAICEQLATAMGA-----GCRN-HVRNLFPGFLHALGDNKSFVRAAALNCINSFGEKGG 130 (241)
13373 T ss_dssp HHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHHGG-----GGGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHC
13374 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHhcH-----HHHH-HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhcC
13375 Confidence 4556666676 46778888999999988764221 1111 113566777777777777788888888888775421
13376
13377
13378 Q NP_000290.2 628 LHRVMGNQVFPE--VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK-QYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
13379 Q Consensus 628 ~~~ll~~giI~~--Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~-~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
13380 . ..+++. +...+.+ .++.++..++.++..++...+.... ......+++.+...+.+. ++.++..+
13381 T Consensus 131 ~-----~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a 198 (241)
13382 T 4QMH_A 131 Y-----KEFFESEMIADALKG------GSPALKTELWAWLADKLPGLPPKSVSKEDIHSMVPHLYAHICDR-NADVRKNA 198 (241)
13383 T ss_dssp S-----GGGSSTTHHHHHHHT------CCHHHHHHHHHHHHHHGGGSCGGGSCHHHHHHHHHHHHHHTTCS-SHHHHHHH
13384 T ss_pred h-----HHhcCHHHHHHHHhC------CCHHHHHHHHHHHHHhccCCCcccCCHHHHHhHHHHHHHHHhCC-CHHHHHHH
13385 Confidence 1 123333 5555554 3677888899999888764322110 011124567777777766 78899999
13386
13387
13388 Q NP_000290.2 705 RLLLSDMWSSK 715 (747)
13389 Q Consensus 705 L~aLsnL~~~~ 715 (747)
13390 +.++..+....
13391 T Consensus 199 ~~~l~~l~~~~ 209 (241)
13392 T 4QMH_A 199 NEAVLGIMIHL 209 (241)
13393 T ss_dssp HHHHHHHHHHH
13394 T ss_pred HHHHHHHHHHh
13395 Confidence 99998887543
13396
13397
13398 No 298
13399 >5A1V_E ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT; TRANSPORT PROTEIN, COPI, COATOMER, COATED; 21.0A {SACCHAROMYCES CEREVISIAE}
13400 Probab=90.35 E-value=0.013 Score=64.93 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=64.4 Template_Neff=10.900
13401
13402 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
13403 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
13404 ..++..+...+.+.+..++..+..++..+....+.. ..+++.+...+.+.+..++..++.++..+....
13405 T Consensus 67 ~~l~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~------~~i~~~l~~~L~~~~~~vr~~al~~L~~~~~~~----- 135 (874)
13406 T 5A1V_E 67 TEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV------IIVTSSLTKDMTGKEDNYRGPAVRALCQITDST----- 135 (874)
13407 T ss_dssp HHHHHHHHHGGGSCCHHHHHHHHHHHHHHHTSCSCG------GGHHHHHHHHHHSSSHHHHHHHHHHHHHHCCHH-----
13408 T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHhcccCchH------hHHHHHHHHhcCCCChhhHHHHHHHHhhcCCHH-----
13409 Confidence 345556666677777788888888887776532211 234555666666667778888888887664211
13410
13411
13412 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
13413 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
13414 ....++..+...+. +.++.++..++.++..+..
13415 T Consensus 136 --~~~~l~~~l~~~l~-d~~~~Vr~~a~~~l~~l~~ 168 (874)
13416 T 5A1V_E 136 --MLQAVERYMKQAIV-DKVPSVSSSALVSSLHLLK 168 (874)
13417 T ss_dssp --HHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHH
13418 T ss_pred --HHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHh
13419 Confidence 01234455555665 5567788888888887765
13420
13421
13422 No 299
13423 >5NZR_G Coatomer subunit alpha, Coatomer subunit; COPI, coatomer, coated vesicles, Transport; 9.2A {Mus musculus}
13424 Probab=90.35 E-value=0.013 Score=64.93 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=64.4 Template_Neff=10.900
13425
13426 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
13427 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
13428 ..++..+...+.+.+..++..+..++..+....+.. ..+++.+...+.+.+..++..++.++..+....
13429 T Consensus 67 ~~l~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~------~~i~~~l~~~L~~~~~~vr~~al~~L~~~~~~~----- 135 (874)
13430 T 5NZR_G 67 TEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV------IIVTSSLTKDMTGKEDNYRGPAVRALCQITDST----- 135 (874)
13431 T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHhcccCchH------hHHHHHHHHhcCCCChhhHHHHHHHHhhcCCHH-----
13432 Confidence 345556666677777788888888887776532211 234555666666667778888888887664211
13433
13434
13435 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
13436 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
13437 ....++..+...+. +.++.++..++.++..+..
13438 T Consensus 136 --~~~~l~~~l~~~l~-d~~~~Vr~~a~~~l~~l~~ 168 (874)
13439 T 5NZR_G 136 --MLQAVERYMKQAIV-DKVPSVSSSALVSSLHLLK 168 (874)
13440 T ss_pred --HHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHh
13441 Confidence 01234455555665 5567788888888887765
13442
13443
13444 No 300
13445 >3W3W_A Importin subunit beta-3, Protein STE12; HEAT repeat, nuclear import, PROTEIN; 2.2A {Saccharomyces cerevisiae}
13446 Probab=90.26 E-value=0.013 Score=64.05 Aligned_cols=157 Identities=10% Similarity=0.054 Sum_probs=83.5 Template_Neff=13.000
13447
13448 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
13449 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
13450 ..++.++..+....++.++..++.+|..++..... . .... .-..+++.+...+.+.++.++..++.++..++...
13451 T Consensus 439 ~~~~~l~~~l~~~~~~~~r~~a~~~l~~l~~~~~~---~-~~~~-~~~~i~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~ 513 (1078)
13452 T 3W3W_A 439 RILPALISKLTSECTSRVQTHAAAALVNFSEFASK---D-ILEP-YLDSLLTNLLVLLQSNKLYVQEQALTTIAFIAEAA 513 (1078)
13453 T ss_dssp HHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTCCH---H-HHGG-GHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH
13454 T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHHHhcCCh---h-hHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
13455 Confidence 35566666665224567778888888887764221 0 0011 11355666777777667788888999998887652
13456
13457
13458 Q NP_000290.2 627 L-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCR---SSASPKA 700 (747)
13459 Q Consensus 627 e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~---s~~d~eV 700 (747)
13460 . . .... ..+++.+...+.... ..++.++..++.++..++.... ...... ...++..+...+. +. +..+
13461 T Consensus 514 ~~~~~~~~-~~~~~~l~~~l~~~~---~~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~-~~~v 587 (1078)
13462 T 3W3W_A 514 KNKFIKYY-DTLMPLLLNVLKVNN---KDNSVLKGKCMECATLIGFAVGKEKFHEH-SQELISILVALQNSDIDE-DDAL 587 (1078)
13463 T ss_dssp GGGGGGGH-HHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHHHCHHHHTTT-HHHHHHHHHHHHTCC------HH
13464 T ss_pred HHhHHHHH-HhHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHHHHHChhhhhHH-HHHHHHHHHHHhCCCCCC-chHH
13465 Confidence 1 1 1111 234555555554310 0145677778888888765321 111111 1123444444444 23 4566
13466
13467
13468 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
13469 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
13470 +..++.++..++..
13471 T Consensus 588 ~~~~~~~l~~l~~~ 601 (1078)
13472 T 3W3W_A 588 RSYLEQSWSRICRI 601 (1078)
13473 T ss_dssp HHHHHHHHHHHHHH
13474 T ss_pred HHHHHHHHHHHHHH
13475 Confidence 77777777666543
13476
13477
13478 No 301
13479 >5H2V_A Importin subunit beta-3, Ubiquitin-like-specific protease; nuclear import, PROTEIN TRANSPORT-HYDROLASE complex; 2.8A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
13480 Probab=90.24 E-value=0.013 Score=64.03 Aligned_cols=158 Identities=9% Similarity=0.045 Sum_probs=84.1 Template_Neff=13.000
13481
13482 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
13483 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
13484 ..++.++..+....++.++..++.+|..++..... . .... .-..+++.+...+.+.++.++..++.++..++...
13485 T Consensus 439 ~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~ 513 (1078)
13486 T 5H2V_A 439 RILPALISKLTSECTSRVQTHAAAALVNFSEFASK---D-ILEP-YLDSLLTNLLVLLQSNKLYVQEQALTTIAFIAEAA 513 (1078)
13487 T ss_dssp HHHHHHHHTTSTTSCHHHHHHHHHHHHHHHTTCCH---H-HHGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHH
13488 T ss_pred hHHHHHHHHcccCCCHHHHHHHHHHHHHHHhcCCh---h-hHHH-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh
13489 Confidence 35566666665224567778888888888764221 0 0011 12356666777777677788889999998887652
13490
13491
13492 Q NP_000290.2 627 L-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR---SSASPKAA 701 (747)
13493 Q Consensus 627 e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~---s~~d~eVr 701 (747)
13494 . . .... ..+++.+...+.... ..++.++..++.++..++..............+++.+...+. +. +..++
13495 T Consensus 514 ~~~~~~~~-~~~~~~l~~~l~~~~---~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~v~ 588 (1078)
13496 T 5H2V_A 514 KNKFIKYY-DTLMPLLLNVLKVNN---KDNSVLKGKCMECATLIGFAVGKEKFHEHSQELISILVALQNSDIDE-DDALR 588 (1078)
13497 T ss_dssp GGGGGGGH-HHHHHHHHHHHTCC-------HHHHHHHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHTCC------CHH
13498 T ss_pred HHHHHHHH-HhHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHHHHHCchhhhHHHHHHHHHHHHHhCCCCCC-chHHH
13499 Confidence 1 1 1111 234555555554310 014567778888888876532111000011123444444444 23 45666
13500
13501
13502 Q NP_000290.2 702 EAARLLLSDMWSS 714 (747)
13503 Q Consensus 702 ~aAL~aLsnL~~~ 714 (747)
13504 ..++.++..++..
13505 T Consensus 589 ~~~~~~l~~l~~~ 601 (1078)
13506 T 5H2V_A 589 SYLEQSWSRICRI 601 (1078)
13507 T ss_dssp HHHHHHHHHHHHH
13508 T ss_pred HHHHHHHHHHHHH
13509 Confidence 7777777666543
13510
13511
13512 No 302
13513 >4NEE_G AP-2 complex subunit sigma, AP-2; clathrin Adaptor AP-2, HIV-1 Nef; 2.8841A {Rattus norvegicus}
13514 Probab=90.08 E-value=0.014 Score=56.75 Aligned_cols=141 Identities=15% Similarity=0.147 Sum_probs=95.0 Template_Neff=12.000
13515
13516 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13517 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13518 .++.++.++. ++++.++..++.+|..+....+. . ...+++.+...+.+.++.++..++.+++.+.....
13519 T Consensus 77 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~~ 145 (398)
13520 T 4NEE_G 77 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE--------L--IRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 145 (398)
13521 T ss_dssp CHHHHHHHHT-CSSHHHHHHHHHHHHHSCCCCHH--------H--HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCHHH
13522 T ss_pred hHHHHHHHHc-CCCccHHHHHHHHHHHHcCCCHH--------H--HHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHH
13523 Confidence 4566777777 46778888888888888764221 1 12356667777777888899999999988764311
13524
13525
13526 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
13527 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
13528 ...+++.+..++ .+ .++.++..++.+|..+....+.. +.....++.+...+.+. ++.++..++
13529 T Consensus 146 -----~~~~~~~l~~~l~~~~------~~~~vr~~a~~~L~~l~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~ 210 (398)
13530 T 4NEE_G 146 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLLNDQ-HLGVVTAAT 210 (398)
13531 T ss_dssp -----HHHHTTHHHHHHHCSS------SCHHHHHHHHHHHHHHHHHCGGG---SCCSSHHHHHHGGGGCS-CHHHHHHHH
13532 T ss_pred -----HHHHHHhHHHHHhcCC------CCHHHHHHHHHHHHHHHHHChhh---ccccchHHHHHHHhcCC-CHHHHHHHH
13533 Confidence 112455566666 54 36788999999999987643221 11234567777777665 678888888
13534
13535
13536 Q NP_000290.2 706 LLLSDMWSS 714 (747)
13537 Q Consensus 706 ~aLsnL~~~ 714 (747)
13538 .+|..+...
13539 T Consensus 211 ~~l~~l~~~ 219 (398)
13540 T 4NEE_G 211 SLITTLAQK 219 (398)
13541 T ss_dssp HHHHHHHHH
13542 T ss_pred HHHHHHHHh
13543 Confidence 888887764
13544
13545
13546 No 303
13547 >6MQ5_A CLIP-associating protein 1; Microtubule Plus End Binding, STRUCTURAL; HET: MSE; 2.146A {Homo sapiens}
13548 Probab=89.98 E-value=0.015 Score=52.93 Aligned_cols=111 Identities=16% Similarity=0.126 Sum_probs=61.3 Template_Neff=11.900
13549
13550 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQL----IGLKEKGLPQIA-RLLQSGNSDVVRSGASLLSNM 622 (747)
13551 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~----llie~giI~~Ll-~LL~s~d~eVr~~AL~aLsnL 622 (747)
13552 .++.++..+. +.++.++..++..|..++..... ... ......+++.+. .++.+.++.++..++.++..+
13553 T Consensus 4 ~l~~l~~~l~-~~~~~~r~~a~~~L~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~l~d~~~~vr~~a~~~l~~l 77 (257)
13554 T 6MQ5_A 4 RMESCLAQVL-QKDVGKRLQVGQELIDYFSDKQK-----SADLEHDQTMLDKLVDGLATSWVNSSNYKVVLLGMDILSAL 77 (257)
13555 T ss_dssp SHHHHHHHHH-CCCHHHHHHHHHHHHHHHHCTTT-----TTTTTTCHHHHHHHHHHCCCCCTTCSSHHHHHHHHHHHHHH
13556 T ss_pred hHHHHHHHHh-cCCHHHHHHHHHHHHHHHhcccc-----ccccccCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
13557 Confidence 3555666676 46778888888888888764321 010 001234555555 456667778888899988888
13558
13559
13560 Q NP_000290.2 623 SRHP-LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
13561 Q Consensus 623 a~~~-e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
13562 +... .........+++.++..+.+ .+..++..++.+|..+..
13563 T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~ 120 (257)
13564 T 6MQ5_A 78 VTRLQDRFKAQIGTVLPSLIDRLGD------AKDSVREQDQTLLLKIMD 120 (257)
13565 T ss_dssp HHHHGGGGHHHHHHHHHHHHHHTTC------SCHHHHHHHHHHHHHHHH
13566 T ss_pred HHHhHHHHHHHHHhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
13567 Confidence 7651 11000111244444444443 234455555555555543
13568
13569
13570 No 304
13571 >4UQI_B AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ENDOCYTOSIS, PROTEIN TRANSPORT, LIPID BINDING; HET: IHP; 2.79A {RATTUS NORVEGICUS}
13572 Probab=89.98 E-value=0.015 Score=60.62 Aligned_cols=109 Identities=11% Similarity=0.011 Sum_probs=67.1 Template_Neff=12.200
13573
13574 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
13575 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
13576 .+++.+...+.+.++.++..++.++..+....+..........+++.+...+.+.+..++..++.++..+.......
13577 T Consensus 160 ~~~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~~~~~~~--- 236 (657)
13578 T 4UQI_B 160 GFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDRE--- 236 (657)
13579 T ss_pred chHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCChhhhhhhhhcHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCHHH---
13580 Confidence 34556666666777788888888888887653321111112345566666666666677777888887776432211
13581
13582
13583 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
13584 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
13585 ...+++.+...+. +.++.++..++.++..+..
13586 T Consensus 237 --~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~ 268 (657)
13587 T 4UQI_B 237 --AQSICERVTPRLS-HANSAVVLSAVKVLMKFLE 268 (657)
13588 T ss_pred --HHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHh
13589 Confidence 1234555556665 4566778888888877765
13590
13591
13592 No 305
13593 >4XRI_A Importin Beta; Transport Protein, Nuclear Transport, Transport; HET: GOL, SO4; 2.05A {Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)}
13594 Probab=89.95 E-value=0.014 Score=61.52 Aligned_cols=159 Identities=9% Similarity=0.055 Sum_probs=88.2 Template_Neff=13.300
13595
13596 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQS--GNSDVVRSGASLLSNMSRH 625 (747)
13597 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s--~d~eVr~~AL~aLsnLa~~ 625 (747)
13598 +++.+...+....+..++..++.++..++..... ....+ -..+++.+...+.+ .+..++..++.++..++..
13599 T Consensus 651 ~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~l~~~ 724 (882)
13600 T 4XRI_A 651 FAPFLYNALGNQEEPSLCSMAIGLVSDVTRSLGE-----RSQPY-CDNFMNYLLGNLRSTTLANQFKPAILQCFGDIASA 724 (882)
13601 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhh-----ccHhh-HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
13602 Confidence 4566666665214566777888888877654221 01111 13466677777766 5677888999999988865
13603
13604
13605 Q NP_000290.2 626 -PLL-HRVMGNQVFPEVTRLLTSHTGN------TSNSEDILSSACYTVRNLMASQPQL-----AKQYFSSSMLNNIINLC 692 (747)
13606 Q Consensus 626 -~e~-~~ll~~giI~~Ll~LL~s~s~~------~~~d~eVr~~Al~aLsnLa~~s~e~-----~~~Lve~giL~~Ll~LL 692 (747)
13607 +.. ..++ ..+++.+...+...... ......++..++.++..++...... ...+. ..+++.+...+
13608 T Consensus 725 ~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~-~~i~~~l~~~~ 802 (882)
13609 T 4XRI_A 725 IGGHFETYL-TIVAQVLQQAATITAGPDGSYEMIDYVISLREGIMDAWGGIIGAMKTSNKTNVLQPYV-ESIFALLNSIA 802 (882)
13610 T ss_pred CCcccHhHH-HHHHHHHHHHhcCCCCCCCCccccccCHHHHHHHHHHHHHHHHhcChhcchhhchhcH-HhHHHHHHHHh
13611 Confidence 211 1111 22444444444321000 0003456667777777776532211 11111 23456666666
13612
13613
13614 Q NP_000290.2 693 RSSAS--PKAAEAARLLLSDMWSSK 715 (747)
13615 Q Consensus 693 ~s~~d--~eVr~aAL~aLsnL~~~~ 715 (747)
13616 .+. + ..++..++.++..++...
13617 T Consensus 803 ~~~-~~~~~vr~~a~~~l~~l~~~~ 826 (882)
13618 T 4XRI_A 803 NDP-NRSEALMRASMGVIGDLADAY 826 (882)
13619 T ss_pred cCC-CCCHHHHHHHHHHHHHHHHHh
13620 Confidence 654 4 788889999998887543
13621
13622
13623 No 306
13624 >4NEE_B AP-2 complex subunit sigma, AP-2; clathrin Adaptor AP-2, HIV-1 Nef; 2.8841A {Rattus norvegicus}
13625 Probab=89.83 E-value=0.016 Score=56.57 Aligned_cols=141 Identities=15% Similarity=0.147 Sum_probs=94.8 Template_Neff=11.900
13626
13627 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13628 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13629 .++.++.++. +++..++..++.+|..+....+. . ...+++.+...+.+.++.++..++.+|+.+.....
13630 T Consensus 77 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~~ 145 (398)
13631 T 4NEE_B 77 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE--------L--IRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 145 (398)
13632 T ss_pred hHHHHHHHhc-CCCHHHHHHHHHHHHHhcccCHH--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCHHH
13633 Confidence 4566777776 46778888888888888764221 1 12356667777777888899999999987764311
13634
13635
13636 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
13637 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
13638 ...+++.+..++ .+ .++.++..++.+|..+....+.. +.....++.+...+.+. ++.++..++
13639 T Consensus 146 -----~~~~~~~l~~~l~~~~------~~~~vr~~a~~~L~~l~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~ 210 (398)
13640 T 4NEE_B 146 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLLNDQ-HLGVVTAAT 210 (398)
13641 T ss_pred -----HHHHHHHHHHHHcCCC------CCHHHHHHHHHHHHHHHHHChhH---hcHhhHHHHHHHHhcCC-CHHHHHHHH
13642 Confidence 112455566666 54 36788999999999987643221 11234567777777665 778888888
13643
13644
13645 Q NP_000290.2 706 LLLSDMWSS 714 (747)
13646 Q Consensus 706 ~aLsnL~~~ 714 (747)
13647 .+|..+...
13648 T Consensus 211 ~~l~~l~~~ 219 (398)
13649 T 4NEE_B 211 SLITTLAQK 219 (398)
13650 T ss_pred HHHHHHHHh
13651 Confidence 888887764
13652
13653
13654 No 307
13655 >6EN4_C Splicing factor 3B subunit 3; Protein complex, splicing modulator, SPLICING; HET: BGZ; 3.08A {Homo sapiens}
13656 Probab=89.78 E-value=0.015 Score=61.60 Aligned_cols=153 Identities=8% Similarity=0.015 Sum_probs=85.9 Template_Neff=12.900
13657
13658 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13659 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13660 .+..+...+. +....++..++.++..+...... ...... ....+++.+...+.+. ..++..++.+|..++....
13661 T Consensus 397 ~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~---~~~~~~-~~~~~~~~l~~~l~~~-~~~~~~a~~~l~~l~~~~~ 470 (852)
13662 T 6EN4_C 397 IISRIVDDLK-DEAEQYRKMVMETIEKIMGNLGA---ADIDHK-LEEQLIDGILYAFQEQ-TTEDSVMLNGFGTVVNALG 470 (852)
13663 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCCh---hhcCHH-HHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHcCC
13664 Confidence 3445555555 34556677777777777653221 000011 1123445555555433 4677888888888876521
13665
13666
13667 Q NP_000290.2 628 -L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
13668 Q Consensus 628 -~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
13669 . .... ..+++.+...+.+ .++.++..++.++..++..............+++.+...+.+. +..++..++
13670 T Consensus 471 ~~~~~~~-~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~ 542 (852)
13671 T 6EN4_C 471 KRVKPYL-PQICGTVLWRLNN------KSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEE-YPEVLGSIL 542 (852)
13672 T ss_pred hhhHHHH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhChhhcCHHHHHhHHHHHHHHccCC-CHHHHHHHH
13673 Confidence 1 1111 2345556666655 3678888999999988864322111112223566666666655 667788888
13674
13675
13676 Q NP_000290.2 706 LLLSDMWSS 714 (747)
13677 Q Consensus 706 ~aLsnL~~~ 714 (747)
13678 .++..++..
13679 T Consensus 543 ~~l~~l~~~ 551 (852)
13680 T 6EN4_C 543 GALKAIVNV 551 (852)
13681 T ss_pred HHHHHHHHh
13682 Confidence 888777654
13683
13684
13685 No 308
13686 >5A1V_E ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT; TRANSPORT PROTEIN, COPI, COATOMER, COATED; 21.0A {SACCHAROMYCES CEREVISIAE}
13687 Probab=89.57 E-value=0.018 Score=63.83 Aligned_cols=141 Identities=10% Similarity=0.100 Sum_probs=80.8 Template_Neff=10.900
13688
13689 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQS-GNSDVVRSGASLLSNMSRHP 626 (747)
13690 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s-~d~eVr~~AL~aLsnLa~~~ 626 (747)
13691 .++.|+.++.......++..++.++..++...+. .....+..|...+.+ ..+.++..++++|+.+....
13692 T Consensus 397 ~~~~L~~~L~~~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~l~~L~~~l~~~~~~~~~~~a~~~L~~~~~~~ 466 (874)
13693 T 5A1V_E 397 LMNFLFTMLREEGGFEYKRAIVDCIISIIEENSE----------SKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKT 466 (874)
13694 T ss_dssp HHHHHHHHHHHHSSSSHHHHHHHHHHHHTTTTHH----------HHHHHHHHHHTSCSSSSCHHHHHHHHHHHHHHCCSS
13695 T ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHHHCHH----------HHHHHHHHHHHHHHhcCCHHHHHHHHHHhcccccCC
13696 Confidence 4555666665222233566677777776653221 112345556666553 34566777777777665431
13697
13698
13699 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
13700 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
13701 .. ...+++.+...+.+ .++.++..++.+|..+....+. ....++..|..++.+. +..++..|..
13702 T Consensus 467 ~~----~~~~l~~l~~~l~~------~~~~vr~~al~aL~~l~~~~~~-----~~~~i~~~L~~~l~d~-~~~vR~~A~~ 530 (874)
13703 T 5A1V_E 467 NN----PSKYIRFIYNRVVL------EHEEVRAGAVSALAKFGAQNEE-----MLPSILVLLKRCVMDD-DNEVRDRATF 530 (874)
13704 T ss_dssp SC----HHHHHHHHHHHHHT------SCHHHHHHHHHHHHHHHHHCGG-----GHHHHHHHHHSTTTSS-SSHHHHHHHH
13705 T ss_pred CC----HHHHHHHHHHhhcc------CCHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHccCC-CHHHHHHHHH
13706 Confidence 11 01244555555554 3567888888888888764221 1123455555666555 7788888888
13707
13708
13709 Q NP_000290.2 707 LLSDMWSS 714 (747)
13710 Q Consensus 707 aLsnL~~~ 714 (747)
13711 ++..+...
13712 T Consensus 531 ~l~~l~~~ 538 (874)
13713 T 5A1V_E 531 YLNVLEQK 538 (874)
13714 T ss_dssp HHHHHHTS
13715 T ss_pred HHHHHHHh
13716 Confidence 88876654
13717
13718
13719 No 309
13720 >5NZR_G Coatomer subunit alpha, Coatomer subunit; COPI, coatomer, coated vesicles, Transport; 9.2A {Mus musculus}
13721 Probab=89.57 E-value=0.018 Score=63.83 Aligned_cols=141 Identities=10% Similarity=0.100 Sum_probs=80.8 Template_Neff=10.900
13722
13723 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQS-GNSDVVRSGASLLSNMSRHP 626 (747)
13724 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s-~d~eVr~~AL~aLsnLa~~~ 626 (747)
13725 .++.|+.++.......++..++.++..++...+. .....+..|...+.+ ..+.++..++++|+.+....
13726 T Consensus 397 ~~~~L~~~L~~~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~l~~L~~~l~~~~~~~~~~~a~~~L~~~~~~~ 466 (874)
13727 T 5NZR_G 397 LMNFLFTMLREEGGFEYKRAIVDCIISIIEENSE----------SKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKT 466 (874)
13728 T ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHHHCHH----------HHHHHHHHHHHHHHhcCCHHHHHHHHHHhcccccCC
13729 Confidence 4555666665222233566677777776653221 112345556666553 34566777777777665431
13730
13731
13732 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
13733 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
13734 .. ...+++.+...+.+ .++.++..++.+|..+....+. ....++..|..++.+. +..++..|..
13735 T Consensus 467 ~~----~~~~l~~l~~~l~~------~~~~vr~~al~aL~~l~~~~~~-----~~~~i~~~L~~~l~d~-~~~vR~~A~~ 530 (874)
13736 T 5NZR_G 467 NN----PSKYIRFIYNRVVL------EHEEVRAGAVSALAKFGAQNEE-----MLPSILVLLKRCVMDD-DNEVRDRATF 530 (874)
13737 T ss_pred CC----HHHHHHHHHHhhcc------CCHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHccCC-CHHHHHHHHH
13738 Confidence 11 01244555555554 3567888888888888764221 1123455555666555 7788888888
13739
13740
13741 Q NP_000290.2 707 LLSDMWSS 714 (747)
13742 Q Consensus 707 aLsnL~~~ 714 (747)
13743 ++..+...
13744 T Consensus 531 ~l~~l~~~ 538 (874)
13745 T 5NZR_G 531 YLNVLEQK 538 (874)
13746 T ss_pred HHHHHHHh
13747 Confidence 88876654
13748
13749
13750 No 310
13751 >6OWT_A AP-2 complex subunit alpha, AP-2; AP, HIV, Nef, trafficking, Protein;{Rattus norvegicus}
13752 Probab=89.50 E-value=0.018 Score=64.23 Aligned_cols=98 Identities=19% Similarity=0.075 Sum_probs=57.2 Template_Neff=11.000
13753
13754 Q NP_000290.2 250 AVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQN 329 (747)
13755 Q Consensus 250 Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~ 329 (747)
13756 ++.++.+.+...+..+...+..+....... ...++..+...+.+.++.++..++.++..+.... ....
13757 T Consensus 79 l~~ll~s~~~~~r~~~~~~l~~l~~~~~~~-----~~~ii~~l~~~l~~~~~~vr~~Al~~l~~~~~~~-------~~~~ 146 (939)
13758 T 6OWT_A 79 AVNLLSSNRYTEKQIGYLFISVLVNSNSEL-----IRLINNAIKNDLASRNPTFMGLALHCIANVGSRE-------MAEA 146 (939)
13759 T ss_pred HHHHhcCCCHHHHHHHHHHHHHHccCChHH-----HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCHH-------HHHH
13760 Confidence 334455555566666666666655432211 1134455556666667778888888887765321 1123
13761
13762
13763 Q NP_000290.2 330 GIREAVSLL--RRTGNAEIQKQLTGLLWNLSST 360 (747)
13764 Q Consensus 330 IL~~Ll~lL--~ss~d~eVr~~AL~aLsnLas~ 360 (747)
13765 ++..+...+ . +.++.++..++.++..+...
13766 T Consensus 147 l~~~l~~~l~~~-~~~~~vR~~a~~~L~~l~~~ 178 (939)
13767 T 6OWT_A 147 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRT 178 (939)
13768 T ss_pred HHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHH
13769 Confidence 444555555 4 45677888888888887763
13770
13771
13772 No 311
13773 >5KC2_B Phosphatidylinositol 3-kinase VPS34 (E.C.2.7.1.137), Serine/threonine-protein; autophagy, phosphatidylinositol 3-kinase (PtdIns3K), endocytosis; 28.0A {Saccharomyces cerevisiae}
13774 Probab=89.34 E-value=0.021 Score=68.25 Aligned_cols=151 Identities=13% Similarity=0.081 Sum_probs=101.4 Template_Neff=9.500
13775
13776 Q NP_000290.2 548 AI-RTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
13777 Q Consensus 548 ~I-~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
13778 ++ +.|+.++. + .+..++..++..|..+....+. .. ....+++.|...|.+.++.++..++.+|..++..
13779 T Consensus 424 ~~~p~l~~ll~-~~~d~~~R~~al~~L~~~~~~~~~-------~~-~~~~i~p~l~~~l~d~~~~vr~~a~~~l~~l~~~ 494 (1454)
13780 T 5KC2_B 424 LFISYLSHSIR-SIVSTATKLKNLELLAVFAQFVSD-------EN-KIDRVVPYFVCCFEDSDQDVQALSLLTLIQVLTS 494 (1454)
13781 T ss_pred HhHHHHHHHhc-CCCCHHHHHHHHHHHHHHhhhCCH-------HH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
13782 Confidence 56 88999998 5 6777888888888887763221 11 2235688888888888999999999999999821
13783
13784
13785 Q NP_000290.2 626 ----PLL-HRVMGNQVFPEVTRLL---TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQY------------------ 679 (747)
13786 Q Consensus 626 ----~e~-~~ll~~giI~~Ll~LL---~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~L------------------ 679 (747)
13787 +.. ...+..++++.|..++ .+ .+..++..|+.+|..|+.........+
13788 T Consensus 495 ~~~~~~~~~~~~~~~~l~~L~~ll~~~~d------~~~~vR~~a~~~l~~la~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 568 (1454)
13789 T 5KC2_B 495 VRKLNQLNENIFVDYLLPRLKRLLISNRQ------NTNYLRIVFANCLSDLAIIINRFQEFTFAQHCNDNSMDNNTEIME 568 (1454)
13790 T ss_pred hhcCHHHHHHHHHcCcHHHHHHHHcCCCC------CcHHHHHHHHHHHHHHhcCCCCcceEEhhHHhhhHHHHHHHHHHH
13791 Confidence 111 2234456778888888 65 367888999999998875422111111
13792
13793
13794 Q NP_000290.2 680 ----FSSSMLNNIINLCRS----SASPKAAEAARLLLSDMWSS 714 (747)
13795 Q Consensus 680 ----ve~giL~~Ll~LL~s----~~d~eVr~aAL~aLsnL~~~ 714 (747)
13796 ...++++.|..++.. . ++.++..|+.+|..+...
13797 T Consensus 569 ~~~~~~~~~~~~l~~ll~~~l~d~-~~~vr~~a~~~l~~l~~~ 610 (1454)
13798 T 5KC2_B 569 SSTKYSAKLIQSVEDLTVSFLTDN-DTYVKMALLQNILPLCKF 610 (1454)
13799 T ss_pred HHHHHHcCHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHHhcC
13800 Confidence 123345556555554 4 677777787777777653
13801
13802
13803 No 312
13804 >2P8Q_A Importin beta-1 subunit, Snurportin-1; HEAT repeat, IBB-domain, Importin, Karyopherin; 2.35A {Homo sapiens} SCOP: a.118.1.1
13805 Probab=89.29 E-value=0.018 Score=60.92 Aligned_cols=154 Identities=10% Similarity=0.087 Sum_probs=87.1 Template_Neff=13.100
13806
13807 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13808 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13809 .++.+...+. +.++.++..++.+|..++..... . .... ....+++.+...+.+.++.++..++.++..++....
13810 T Consensus 367 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~---~-~~~~-~~~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 440 (876)
13811 T 2P8Q_A 367 VLPFIKEHIK-NPDWRYRDAAVMAFGCILEGPEP---S-QLKP-LVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLP 440 (876)
13812 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHTSSSSCH---H-HHHH-HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCG
13813 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhCCCh---h-hcHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHCc
13814 Confidence 3555666666 46677888888888888764221 0 0111 123456677777777778899999999999887521
13815
13816
13817 Q NP_000290.2 628 LH---RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK----------QYFS---SSMLNNIINL 691 (747)
13818 Q Consensus 628 ~~---~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~----------~Lve---~giL~~Ll~L 691 (747)
13819 .. ......+++.+...+.+ ++.++..++.++..++........ ..+. ..++..+...
13820 T Consensus 441 ~~~~~~~~~~~~~~~l~~~l~~-------~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (876)
13821 T 2P8Q_A 441 EAAINDVYLAPLLQCLIEGLSA-------EPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLET 513 (876)
13822 T ss_dssp GGTSSTTTHHHHHHHHHHHTTS-------CHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSCSCCTTGGGHHHHHHHHHHH
13823 T ss_pred HHhccchhHHHHHHHHHHHccC-------CHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhccHhHHHHHHHHHHH
13824 Confidence 10 11112345555555543 356777888888887754221100 0000 1234444444
13825
13826
13827 Q NP_000290.2 692 CRS--SASPKAAEAARLLLSDMWSS 714 (747)
13828 Q Consensus 692 L~s--~~d~eVr~aAL~aLsnL~~~ 714 (747)
13829 +.. ..+..++..++.++..+...
13830 T Consensus 514 l~~~~~~~~~~r~~~~~~l~~l~~~ 538 (876)
13831 T 2P8Q_A 514 TDRPDGHQNNLRSSAYESLMEIVKN 538 (876)
13832 T ss_dssp TTCTTTTGGGHHHHHHHHHHHHHHS
13833 T ss_pred hcCCCCCcchHHHHHHHHHHHHHHh
13834 Confidence 431 11456777777777776643
13835
13836
13837 No 313
13838 >2QNA_A Importin subunit beta-1, Snurportin-1; Nuclear transport, import of spliceosomal; HET: SO4; 2.84A {Homo sapiens}
13839 Probab=89.10 E-value=0.019 Score=59.41 Aligned_cols=115 Identities=18% Similarity=0.151 Sum_probs=67.9 Template_Neff=13.200
13840
13841 Q NP_000290.2 245 LTIPKAVQYLSSQD--EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS--PNQNVQQAAAGALRNLVFRSTT 320 (747)
13842 Q Consensus 245 ~iL~~Ll~lL~ssd--~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s--~d~eVr~~AL~aLs~La~~~~~ 320 (747)
13843 .+++.+...+.+.+ ..++..++.++..++...+..........+++.+...+.+ .++.++..++.++..++.....
13844 T Consensus 3 ~l~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~l~~~~~~ 82 (762)
13845 T 2QNA_A 3 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA 82 (762)
13846 T ss_pred chHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhCCHhhcHHHHHhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCc
13847 Confidence 34555666666555 6788888888888775432211111112345666666653 3577888888888888754332
13848
13849
13850 Q NP_000290.2 321 NKL-ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
13851 Q Consensus 321 ~~~-~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
13852 ... ......+++.+...+. +.++.++..++.++..++..
13853 T Consensus 83 ~~~~~~~~~~i~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 122 (762)
13854 T 2QNA_A 83 NFDKESERHFIMQVVCEATQ-CPDTRVRVAALQNLVKIMSL 122 (762)
13855 T ss_pred cCCcchhHHhHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHh
13856 Confidence 111 0111234555555665 45677888888888887763
13857
13858
13859 No 314
13860 >1IBR_B RAN IMPORTIN BETA SUBUNIT; SMALL GTPASE NUCLEAR TRANSPORT; HET: GNP; 2.3A {Homo sapiens} SCOP: a.118.1.1
13861 Probab=89.10 E-value=0.019 Score=55.65 Aligned_cols=154 Identities=11% Similarity=0.066 Sum_probs=94.9 Template_Neff=12.900
13862
13863 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
13864 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
13865 .++.|...+. +.+ +.++..++.+|..+...... . .... ....+++.+...+.+.+ ..++..++.++..++
13866 T Consensus 129 ~~~~l~~~l~-~~~~~~~~~~~~l~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~l~ 202 (462)
13867 T 1IBR_B 129 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (462)
13868 T ss_dssp HHHHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHSCG---G-GTGG-GHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHT
13869 T ss_pred HHHHHHHHhh-CCCCchHHHHHHHHHHHHHhhcCCH---H-HHHH-HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
13870 Confidence 5666777776 344 67788888888888764221 0 0001 12456777788887766 889999999999887
13871
13872
13873 Q NP_000290.2 624 RHPLL-H--RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
13874 Q Consensus 624 ~~~e~-~--~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
13875 ..... . ......+...+..++.+ .++.++..++.+|..+...............+++.+...+.+. ++.+
13876 T Consensus 203 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v 275 (462)
13877 T 1IBR_B 203 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 275 (462)
13878 T ss_dssp TTTHHHHTSHHHHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCS-SHHH
13879 T ss_pred HHHHHhCCCHHHHHHHHHHHhHHhcC------CCHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHhcC-CHHH
13880 Confidence 65211 0 11222233334444433 3567888889999888764333222222222366667777665 7788
13881
13882
13883 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
13884 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
13885 +..++.++..++..
13886 T Consensus 276 ~~~a~~~l~~l~~~ 289 (462)
13887 T 1IBR_B 276 ALQGIEFWSNVCDE 289 (462)
13888 T ss_dssp HHHHHHHHHHHHHH
13889 T ss_pred HHHHHHHHHHHHHH
13890 Confidence 88898888888764
13891
13892
13893 No 315
13894 >1QGR_A IMPORTIN BETA SUBUNIT, IMPORTIN ALPHA-2; TRANSPORT RECEPTOR, NUCLEAR IMPORT, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.1
13895 Probab=88.89 E-value=0.021 Score=60.61 Aligned_cols=154 Identities=10% Similarity=0.084 Sum_probs=87.2 Template_Neff=13.000
13896
13897 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13898 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13899 .++.+...+. +.++.++..++.+|..++..... . .... .-..+++.+...+.+.++.++..++.++..++....
13900 T Consensus 367 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 440 (876)
13901 T 1QGR_A 367 VLPFIKEHIK-NPDWRYRDAAVMAFGCILEGPEP---S-QLKP-LVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLP 440 (876)
13902 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHcCCH---H-hcHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCC
13903 Confidence 3455556666 36677888888888888764221 0 0111 123456677777777788899999999999887521
13904
13905
13906 Q NP_000290.2 628 L--H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK----------QYFS---SSMLNNIINL 691 (747)
13907 Q Consensus 628 ~--~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~----------~Lve---~giL~~Ll~L 691 (747)
13908 . . ......+++.+...+.+ ++.++..++.++..++........ ..+. ..++..+...
13909 T Consensus 441 ~~~~~~~~~~~~~~~l~~~l~~-------~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (876)
13910 T 1QGR_A 441 EAAINDVYLAPLLQCLIEGLSA-------EPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLET 513 (876)
13911 T ss_pred hhhcCCchHHHHHHHHHHHhcC-------CHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcchhhhhhHHHHHHHHHHH
13912 Confidence 1 0 11112345555555543 356777888888887754221100 0000 1234444444
13913
13914
13915 Q NP_000290.2 692 CRS--SASPKAAEAARLLLSDMWSS 714 (747)
13916 Q Consensus 692 L~s--~~d~eVr~aAL~aLsnL~~~ 714 (747)
13917 +.. ..+..++..++.++..++..
13918 T Consensus 514 l~~~~~~~~~~r~~~~~~l~~l~~~ 538 (876)
13919 T 1QGR_A 514 TDRPDGHQNNLRSSAYESLMEIVKN 538 (876)
13920 T ss_pred hcCCCCCCHHHHHHHHHHHHHHHHc
13921 Confidence 431 11456777788877777643
13922
13923
13924 No 316
13925 >2DB0_A 253aa long hypothetical protein; HEAT repeats, helical structure, Structural; 2.2A {Pyrococcus horikoshii}
13926 Probab=88.88 E-value=0.021 Score=50.55 Aligned_cols=141 Identities=13% Similarity=0.132 Sum_probs=92.6 Template_Neff=12.700
13927
13928 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13929 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13930 .++.+...+. +.++.++..++.++..+...... . ....++.+...+.+.+..++..++.++..+.....
13931 T Consensus 108 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~~~~~a~~~l~~~~~~~~ 176 (253)
13932 T 2DB0_A 108 MIPVLFANYR-IGDEKTKINVSYALEEIAKANPM--------L--MASIVRDFMSMLSSKNREDKLTALNFIEAMGENSF 176 (253)
13933 T ss_dssp HHHHHHHHSC-CCSHHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHHHTSCSSHHHHHHHHHHHHTCCTTTH
13934 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhcH
13935 Confidence 4566677776 46778888888888887653211 1 13456667777777778888888888887654311
13936
13937
13938 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
13939 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
13940 . .....++.+...+.+ .++.++..++.+|..+....+ .....++.+...+.+. ++.++..++.+
13941 T Consensus 177 ~---~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~------~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 240 (253)
13942 T 2DB0_A 177 K---YVNPFLPRIINLLHD------GDEIVRASAVEALVHLATLND------KLRKVVIKRLEELNDT-SSLVNKTVKEG 240 (253)
13943 T ss_dssp H---HHGGGHHHHHGGGGC------SSHHHHHHHHHHHHHHHTSCH------HHHHHHHHHHHHCCCS-CHHHHHHHHHH
13944 T ss_pred H---hHHhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCH------HHHHHHHHHHHHhcCC-CHHHHHHHHHH
13945 Confidence 0 011345556666665 367888899999998875322 1123466666667665 67889999999
13946
13947
13948 Q NP_000290.2 708 LSDMWSSK 715 (747)
13949 Q Consensus 708 LsnL~~~~ 715 (747)
13950 |..+....
13951 T Consensus 241 l~~l~~~~ 248 (253)
13952 T 2DB0_A 241 ISRLLLLE 248 (253)
13953 T ss_dssp HHHHHHC-
13954 T ss_pred HHHHHHHh
13955 Confidence 98887644
13956
13957
13958 No 317
13959 >2DB0_B 253aa long hypothetical protein; HEAT repeats, helical structure, Structural; 2.2A {Pyrococcus horikoshii}
13960 Probab=88.88 E-value=0.021 Score=50.55 Aligned_cols=141 Identities=13% Similarity=0.132 Sum_probs=93.1 Template_Neff=12.700
13961
13962 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13963 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13964 .++.+...+. +.++.++..++.++..+...... . ....++.+...+.+.+..++..++.++..+.....
13965 T Consensus 108 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~~~~~a~~~l~~~~~~~~ 176 (253)
13966 T 2DB0_B 108 MIPVLFANYR-IGDEKTKINVSYALEEIAKANPM--------L--MASIVRDFMSMLSSKNREDKLTALNFIEAMGENSF 176 (253)
13967 T ss_dssp HHHHHTTTCC-CCSHHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHGGGGCSSHHHHHHHHHHHTTCCTTTH
13968 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhcH
13969 Confidence 4566677776 46778888888888887653211 1 13456667777777778888888888887654311
13970
13971
13972 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
13973 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
13974 . .....++.+...+.+ .++.++..++.+|..+....+ .....++.+...+.+. ++.++..++.+
13975 T Consensus 177 ~---~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~------~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 240 (253)
13976 T 2DB0_B 177 K---YVNPFLPRIINLLHD------GDEIVRASAVEALVHLATLND------KLRKVVIKRLEELNDT-SSLVNKTVKEG 240 (253)
13977 T ss_dssp H---HHGGGHHHHHGGGGC------SCHHHHHHHHHHHHHHHHHCH------HHHHHHHHHHHTCCCS-CHHHHHHHHHH
13978 T ss_pred H---hHHhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCH------HHHHHHHHHHHHhcCC-CHHHHHHHHHH
13979 Confidence 0 011345556666665 367888899999998875322 1123466666667665 67889999999
13980
13981
13982 Q NP_000290.2 708 LSDMWSSK 715 (747)
13983 Q Consensus 708 LsnL~~~~ 715 (747)
13984 |..+....
13985 T Consensus 241 l~~l~~~~ 248 (253)
13986 T 2DB0_B 241 ISRLLLLE 248 (253)
13987 T ss_dssp HHHHHTTC
13988 T ss_pred HHHHHHHh
13989 Confidence 98887644
13990
13991
13992 No 318
13993 >4K92_B CLIP-associating protein 1; HEAT-Repeat TOG domain, Regulator of; HET: MSE; 2.005A {Homo sapiens}
13994 Probab=88.82 E-value=0.022 Score=52.46 Aligned_cols=148 Identities=16% Similarity=0.091 Sum_probs=93.3 Template_Neff=11.700
13995
13996 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13997 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13998 +++.+...+. +.+..++..++.+|..++..... .... .-..+++.|+..+.+.+..++..++.+|..++....
13999 T Consensus 90 l~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~-----~~~~-~~~~~l~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 162 (273)
14000 T 4K92_B 90 LDGAFKLSAK-DLRSQVVREACITLGHLSSVLGN-----KFDH-GAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTH 162 (273)
14001 T ss_dssp THHHHHHHHT-CSCHHHHHHHHHHHHHHHHHHGG-----GGHH-HHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHCC
14002 T ss_pred HHHHHHHHHH-cHHHHHHHHHHHHHHHHHHHHHH-----HhHH-HHHHHHHHHHHHCccccHHHHHHHHHHHHHHHHhCC
14003 Confidence 4556666666 46778888899988888764221 0111 123466677777777777788888888888775421
14004
14005
14006 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
14007 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
14008 . ..+++.+...+.+ .++.++..++.+|..++...........-..+++.+...+.+. +..++..++.+
14009 T Consensus 163 ~-----~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~i~~~l~~~l~d~-~~~vr~~a~~~ 230 (273)
14010 T 4K92_B 163 I-----PRLIPVITSNCTS------KSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDA-DSEARIEARKC 230 (273)
14011 T ss_dssp C-----TTHHHHHHGGGGC------SCHHHHHHHHHHHHHHHHHSCHHHHTTCHHHHHHHHHHHHTCS-SHHHHHHHHHH
14012 T ss_pred C-----chHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHH
14013 Confidence 1 1234455555554 3577888888888888764322100011123566666777666 78899999999
14014
14015
14016 Q NP_000290.2 708 LSDMWSS 714 (747)
14017 Q Consensus 708 LsnL~~~ 714 (747)
14018 +..+...
14019 T Consensus 231 l~~l~~~ 237 (273)
14020 T 4K92_B 231 YWGFHSH 237 (273)
14021 T ss_dssp HHHHHHH
14022 T ss_pred HHHHHHH
14023 Confidence 8887754
14024
14025
14026 No 319
14027 >6MQ7_B CLIP-associating protein 1; microtubule binding protein, STRUCTURAL PROTEIN; 1.78A {Homo sapiens}
14028 Probab=88.82 E-value=0.022 Score=52.46 Aligned_cols=148 Identities=16% Similarity=0.091 Sum_probs=93.3 Template_Neff=11.700
14029
14030 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14031 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14032 +++.+...+. +.+..++..++.+|..++..... .... .-..+++.|+..+.+.+..++..++.+|..++....
14033 T Consensus 90 l~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~-----~~~~-~~~~~l~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 162 (273)
14034 T 6MQ7_B 90 LDGAFKLSAK-DLRSQVVREACITLGHLSSVLGN-----KFDH-GAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTH 162 (273)
14035 T ss_dssp THHHHHHHHT-CSSHHHHHHHHHHHHHHHHHHGG-----GGHH-HHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHCC
14036 T ss_pred HHHHHHHHHH-cHHHHHHHHHHHHHHHHHHHHHH-----HhHH-HHHHHHHHHHHHCccccHHHHHHHHHHHHHHHHhCC
14037 Confidence 4556666666 46778888899988888764221 0111 123466677777777777788888888888775421
14038
14039
14040 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
14041 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
14042 . ..+++.+...+.+ .++.++..++.+|..++...........-..+++.+...+.+. +..++..++.+
14043 T Consensus 163 ~-----~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~i~~~l~~~l~d~-~~~vr~~a~~~ 230 (273)
14044 T 6MQ7_B 163 I-----PRLIPVITSNCTS------KSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDA-DSEARIEARKC 230 (273)
14045 T ss_dssp C-----GGGHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHSCGGGTTTCHHHHHHHHHHHHTCS-SHHHHHHHHHH
14046 T ss_pred C-----chHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHH
14047 Confidence 1 1234455555554 3577888888888888764322100011123566666777666 78899999999
14048
14049
14050 Q NP_000290.2 708 LSDMWSS 714 (747)
14051 Q Consensus 708 LsnL~~~ 714 (747)
14052 +..+...
14053 T Consensus 231 l~~l~~~ 237 (273)
14054 T 6MQ7_B 231 YWGFHSH 237 (273)
14055 T ss_dssp HHHHHHH
14056 T ss_pred HHHHHHH
14057 Confidence 8887754
14058
14059
14060 No 320
14061 >1GCJ_B IMPORTIN-BETA; HEAT REPEAT MOTIF, NUCLEAR PORE-TARGETING; HET: MSE; 2.6A {Mus musculus} SCOP: a.118.1.1
14062 Probab=88.73 E-value=0.022 Score=55.37 Aligned_cols=154 Identities=12% Similarity=0.095 Sum_probs=94.5 Template_Neff=12.800
14063
14064 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
14065 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
14066 .++.|+..+. +.+ +.++..++.+|..+...... .........+++.+...+.+.+ +.++..++.++..+.
14067 T Consensus 135 ~~~~l~~~l~-~~~~~~~~~~~~l~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~~~ 208 (460)
14068 T 1GCJ_B 135 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP-----EQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 208 (460)
14069 T ss_dssp HHHHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHSCH-----HHHGGGHHHHHHHHHHHHCTTCSCHHHHHHHHHHHHHHT
14070 T ss_pred HHHHHHHHhh-CCCCcHHHHHHHHHHHHHHhhhCCH-----HHhHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
14071 Confidence 4566777776 344 67788888888888764221 0000112356777777787665 889999999999887
14072
14073
14074 Q NP_000290.2 624 RHPLL--H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
14075 Q Consensus 624 ~~~e~--~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
14076 ..... . ......+...+..++.+ .+..++..++.+|..+....+......+...+++.+..++.+. ++.+
14077 T Consensus 209 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v 281 (460)
14078 T 1GCJ_B 209 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 281 (460)
14079 T ss_dssp TTCHHHHTSHHHHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHHTTCGGGGGGTCCCCCHHHHHHHHTCS-SHHH
14080 T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHhhCC-CHHH
14081 Confidence 65111 1 11112233344444443 3567888889999888765333222222222366677777665 7788
14082
14083
14084 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
14085 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
14086 +..++.++..++..
14087 T Consensus 282 ~~~a~~~l~~l~~~ 295 (460)
14088 T 1GCJ_B 282 ALQGIEFWSNVCDE 295 (460)
14089 T ss_dssp HHHHHHHHHHHHHH
14090 T ss_pred HHHHHHHHHHHHHH
14091 Confidence 88899988888764
14092
14093
14094 No 321
14095 >1F59_B IMPORTIN BETA-1/FXFG NUCLEOPORIN; Protein-protein complex, TRANSPORT PROTEIN RECEPTOR; 2.8A {Homo sapiens} SCOP: a.118.1.1
14096 Probab=88.68 E-value=0.022 Score=54.84 Aligned_cols=154 Identities=11% Similarity=0.067 Sum_probs=94.0 Template_Neff=12.900
14097
14098 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
14099 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
14100 .++.+...+. +.+ +.++..++.+|..+...... . .... ....+++.+..++.+.+ ..++..++.++..++
14101 T Consensus 129 ~~~~l~~~l~-~~~~~~~~~~~~l~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~l~ 202 (442)
14102 T 1F59_B 129 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (442)
14103 T ss_dssp HHHHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHSCG---G-GGGG-GHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHHHS
14104 T ss_pred HHHHHHHHhh-CCCCcHHHHHHHHHHHHHHHhhCCH---H-HhHH-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
14105 Confidence 5666777776 344 67788888888887754221 0 0001 12456777777777766 889999999999987
14106
14107
14108 Q NP_000290.2 624 RHPLL--H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
14109 Q Consensus 624 ~~~e~--~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
14110 ..... . ......+...+..++.+ .+..++..++.+|..++...+..........+++.+..++.+. ++.+
14111 T Consensus 203 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v 275 (442)
14112 T 1F59_B 203 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 275 (442)
14113 T ss_dssp TTCHHHHHSHHHHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHTGGGGGGTCCCCCHHHHHHHHHSS-CHHH
14114 T ss_pred HHHHHcCCCHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHhcCC-cHHH
14115 Confidence 65211 1 01112233333333333 3567888889999888765333322222222356666777655 7788
14116
14117
14118 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
14119 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
14120 +..++.++..++..
14121 T Consensus 276 ~~~a~~~l~~l~~~ 289 (442)
14122 T 1F59_B 276 ALQGIEFWSNVCDE 289 (442)
14123 T ss_dssp HHHHHHHHHHHHHH
14124 T ss_pred HHHHHHHHHHHhhH
14125 Confidence 88899988888764
14126
14127
14128 No 322
14129 >1UKL_A Importin beta-1 subunit/Sterol regulatory element; Transcription factor, Nuclear transport factor; HET: MSE; 3.0A {Mus musculus} SCOP: a.118.1.1
14130 Probab=88.63 E-value=0.022 Score=60.17 Aligned_cols=113 Identities=10% Similarity=0.112 Sum_probs=64.3 Template_Neff=13.100
14131
14132 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTN-KLE 324 (747)
14133 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~-~~~ 324 (747)
14134 +++.+...+.+.++.++..++.++..+...............+++.+...+.+.+..++..++.++..++...... ...
14135 T Consensus 367 ~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~ 446 (876)
14136 T 1UKL_A 367 VLPFIKEHIKNPDWRYRDAAVMAFGSILEGPEPNQLKPLVIQAMPTLIELMKDPSVVVRDTTAWTVGRICELLPEAAIND 446 (876)
14137 T ss_dssp HHHHHHHHSSCSSHHHHHHHHHHHHTTSSSSCHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHHSCT
14138 T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHChHHhcCc
14139 Confidence 3344444455566778888888888876543211111112345566666666667788888888888887543321 001
14140
14141
14142 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
14143 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
14144 .....+++.+...+. . ++.++..++.++..++..
14145 T Consensus 447 ~~~~~~~~~l~~~l~-~-~~~~~~~~~~~l~~l~~~ 480 (876)
14146 T 1UKL_A 447 VYLAPLLQCLIEGLS-A-EPRVASNVCWAFSSLAEA 480 (876)
14147 T ss_dssp TTHHHHHHHHHHHTT-S-CHHHHHHHHHHHHHHHHH
14148 T ss_pred cchHHHHHHHHHHhc-C-ChhHHHHHHHHHHHHHHH
14149 Confidence 111234555555554 3 456677777777776653
14150
14151
14152 No 323
14153 >1U6G_C Cullin homolog 1, RING-box protein; cullin repeat, heat repeat, ring; 3.1A {Homo sapiens} SCOP: a.118.1.2
14154 Probab=88.22 E-value=0.025 Score=62.86 Aligned_cols=146 Identities=12% Similarity=0.093 Sum_probs=89.7 Template_Neff=12.800
14155
14156 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14157 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14158 .++.++..+. . ++.++..++.++..+....+. . .... .-..+++.+...+.+.++.++..++.+|+.+.....
14159 T Consensus 891 ~~~~l~~~l~-~-~~~~r~~~~~~l~~i~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 963 (1230)
14160 T 1U6G_C 891 YLPFVLQEIT-S-QPKRQYLLLHSLKEIISSASV---V-GLKP-YVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDP 963 (1230)
14161 T ss_dssp HHHHHHHHHH-S-CGGGHHHHHHHHHHHHHSSCS---T-TTHH-HHHHHHHHHTTCCCCSSTTHHHHHHHHHHHHHHSSG
14162 T ss_pred HHHHHHHHHc-c-CchHHHHHHHHHHHHHhcccc---c-ccHH-hHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHccCH
14163 Confidence 4555555554 2 455666777777777653221 0 0001 113466677777777788899999999988876421
14164
14165
14166 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
14167 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
14168 ...++.+...+.+ .+..++..++.+|..+....+........ ..++.++..+.+. ++.++..++.+
14169 T Consensus 964 ------~~~~~~l~~~l~~------~~~~~r~~~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~l~d~-~~~vr~~a~~~ 1029 (1230)
14170 T 1U6G_C 964 ------ETLLPRLKGYLIS------GSSYARSSVVTAVKFTISDHPQPIDPLLK-NCIGDFLKTLEDP-DLNVRRVALVT 1029 (1230)
14171 T ss_dssp ------GGTHHHHTTTSSS------SCHHHHHHHHHHTGGGCCSSCCTHHHHHH-HHSTTTHHHHSSS-STHHHHHHHHH
14172 T ss_pred ------HhHHHHHHHHhhC------CCHHHHHHHHHHHHHHHcCCCCCccHHHH-HHHHHHHHHcCCC-CHHHHHHHHHH
14173 Confidence 1234555666654 25667788888888877643221111222 4567777777766 77888888888
14174
14175
14176 Q NP_000290.2 708 LSDMWSS 714 (747)
14177 Q Consensus 708 LsnL~~~ 714 (747)
14178 +..+...
14179 T Consensus 1030 l~~l~~~ 1036 (1230)
14180 T 1U6G_C 1030 FNSAAHN 1036 (1230)
14181 T ss_dssp HHHHHHH
14182 T ss_pred HHHHHhc
14183 Confidence 8888754
14184
14185
14186 No 324
14187 >4MFU_A Beta-catenin-like protein 1; ARM repeats, GENE REGULATION; 2.744A {Homo sapiens}
14188 Probab=88.09 E-value=0.031 Score=59.08 Aligned_cols=135 Identities=14% Similarity=0.062 Sum_probs=91.1 Template_Neff=8.700
14189
14190 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDE---------SAKQQVYQLGGICKLVDLLRS------PNQNVQQAAAGA 310 (747)
14191 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~---------~~~~~li~~~IL~~Ll~lL~s------~d~eVr~~AL~a 310 (747)
14192 +++.|+.++.+.+..+...++.+|..++.... .....+...++++.++..+.. .+......++.+
14193 T Consensus 69 ~i~~Lv~LL~~~n~~i~~~a~~~L~~Lt~~~~~~~~~~~~~~~~~~l~~~g~l~~Lv~~L~~~~e~~~~d~~~~~~al~~ 148 (490)
14194 T 4MFU_A 69 AVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAI 148 (490)
14195 T ss_dssp HHHHHHHHTSCSSHHHHHHHHHHHHHHHHGGGSSCCCHHHHHHHHHHHHTTHHHHHHHHHHHCCTTCHHHHHHHHHHHHH
14196 T ss_pred hHHHHHHHhCCCCHHHHHHHHHHHHHHcCcccccCChhhHHHHHHHHHhCCHHHHHHHHHHhccccccchHHHHHHHHHH
14197 Confidence 45566677776667778888888888876432 122333445677777777764 456677888899
14198
14199
14200 Q NP_000290.2 311 LRNLVFRSTTNKLETRRQNGIREAVSLLRRTG--NAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVII 381 (747)
14201 Q Consensus 311 Ls~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~--d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
14202 |.+++...+.....+...++++.|+..+. .. ...++..+..+|..++.. ......+.. ++++.|+.+|..
14203 T Consensus 149 L~nL~~~~~~~~~~i~~~~~l~~Ll~~L~-~~~~~~~~k~~a~~~L~~L~~~~~~~~~~l~~~g~i~~Ll~lL~~ 222 (490)
14204 T 4MFU_A 149 VENMAEFRPEMCTEGAQQGLLQWLLKRLK-AKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSV 222 (490)
14205 T ss_dssp HHHHHHHSTTHHHHHCCCCCHHHHHHHHH-CCSCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHT
14206 T ss_pred HHHHhccCHHHHHHHHHCCHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCchHHHHHHHHHh
14207 Confidence 99888654333333444567888888886 33 467788899999999875 333444444 788888888863
14208
14209
14210 No 325
14211 >6CRI_I Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
14212 Probab=87.58 E-value=0.03 Score=55.48 Aligned_cols=141 Identities=14% Similarity=0.110 Sum_probs=94.1 Template_Neff=13.200
14213
14214 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14215 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14216 .++.++..+. +.+..++..++.++..+....+. . ...+++.+...+.+.++.++..++.++..+.....
14217 T Consensus 37 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 105 (570)
14218 T 6CRI_I 37 LFPDVVNCMQ-TDNLELKKLVYLYLMNYAKSQPD--------M--AIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKI 105 (570)
14219 T ss_dssp GHHHHHHTCS-CSCHHHHHHHHHHHHHTTTTSTT--------G--GGTTHHHHHHHTSSSCHHHHHHHHHHHHHCCCTTT
14220 T ss_pred hHHHHHHhcc-CCCHHHHHHHHHHHHHHHccCHh--------H--HHHHHHHHHHHcCCCCHHHHHHHHHHHccCChhHH
14221 Confidence 4555666676 46677888888888887754221 1 12345666777777788889999998888764311
14222
14223
14224 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
14225 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
14226 ...+++.+...+.+ .++.++..++.+|..+....+... .....++.+...+.+. ++.++..++.+
14227 T Consensus 106 -----~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~~~~---~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 170 (570)
14228 T 6CRI_I 106 -----TEYLCEPLRKCLKD------EDPYVRKTAAVCVAKLHDINAQLV---EDQGFLDTLKDLISDS-NPMVVANAVAA 170 (570)
14229 T ss_dssp -----TTTSHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHCHHHH---HHHTHHHHHHHHHTSS-SHHHHHHHHHH
14230 T ss_pred -----HHHHHHHHHHhcCC------CCHHHHHHHHHHHHHHHHhChhhh---hccchHHHHHHHhcCC-CHHHHHHHHHH
14231 Confidence 12345556666665 367888999999998876433221 1134567777777766 77888889998
14232
14233
14234 Q NP_000290.2 708 LSDMWSS 714 (747)
14235 Q Consensus 708 LsnL~~~ 714 (747)
14236 |..+...
14237 T Consensus 171 l~~~~~~ 177 (570)
14238 T 6CRI_I 171 LSEIAES 177 (570)
14239 T ss_dssp HHHHHHH
14240 T ss_pred HHHHHhh
14241 Confidence 8888765
14242
14243
14244 No 326
14245 >3QML_D 78 kDa glucose-regulated protein homolog; Armadillo like repeats, CHAPERONE-PROTEIN TRANSPORT; HET: PO4; 2.31A {Saccharomyces cerevisiae}
14246 Probab=87.49 E-value=0.038 Score=55.35 Aligned_cols=165 Identities=6% Similarity=-0.069 Sum_probs=100.7 Template_Neff=7.900
14247
14248 Q NP_000290.2 534 ETNPKGSGWLYHSDAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEK--GLPQIA---RLLQ-- 605 (747)
14249 Q Consensus 534 ~~ni~~~~~lve~G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~g--iI~~Ll---~LL~-- 605 (747)
14250 .+++.....+++.| ++.|+.++... ....++..|+++|+..+.+++. ....+.+.+ +++.|+ ..|.
14251 T Consensus 56 ~hdid~a~~~~~~g-~~~L~~~l~~~~~~~~ir~~Aa~iigsa~qNNP~-----aq~~~~~~~~~~l~~Ll~~~~~L~~~ 129 (315)
14252 T 3QML_D 56 AHDYKHGYKIITHE-FALLANLSLNENLPLTLRELSTRVITSCLRNNPP-----VVEFINESFPNFKSKIMAALSNLNDS 129 (315)
14253 T ss_dssp HTSHHHHHHHHHHH-HHHHHHHHHCTTSCHHHHHHHHHHHHHHHTTCTT-----HHHHHHHHCTTHHHHHHHHHHHHHCC
14254 T ss_pred HccHHHHHHHHHch-HHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhCHH-----HHHHHHHHCccHHHHHHHHHHhhccC
14255 Confidence 34556666677888 88888888721 5678999999999999988764 344445555 677777 4443
14256
14257
14258 Q NP_000290.2 606 --SGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA------ 676 (747)
14259 Q Consensus 606 --s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~------ 676 (747)
14260 ..++.++..++.+|+.|+.+... ..+ ++..|..++... ..+..++..++.++..+........
14261 T Consensus 130 ~~~~~~~v~~k~L~aLS~Lir~~~~~~~F----G~~~L~~~~~~~----~~~~~~~~K~l~ll~dl~~~~~~~~~~~~~~ 201 (315)
14262 T 3QML_D 130 NHRSSNILIKRYLSILNELPVTSEDLPIY----STVVLQNVYERN----NKDKQLQIKVLELISKILKADMYENDDTNLI 201 (315)
14263 T ss_dssp ---CTHHHHHHHHHHHHHSCCCGGGGGGS----CHHHHHHHHHTT----TTCHHHHHHHHHHHHHHHTTTC------CHH
14264 T ss_pred CCcCCHHHHHHHHHHHHhhcCCCccHhhh----cHHHHHHHHHhC----CCCHHHHHHHHHHHHHHHHhccccCCCcchH
14265 Confidence 35677888999999999987322 222 456666666431 0135677788888888775432211
14266
14267
14268 Q NP_000290.2 677 --------KQYFSSSMLNNIINLCRSS-ASPKAAEAARLLLSDMW 712 (747)
14269 Q Consensus 677 --------~~Lve~giL~~Ll~LL~s~-~d~eVr~aAL~aLsnL~ 712 (747)
14270 ......+.+..+...+... .+....+.++.+|..|.
14271 T Consensus 202 ~~~~~~~~~~~~~~~~c~~l~~~L~~~~~d~~~~ek~l~~L~~L~ 246 (315)
14272 T 3QML_D 202 LFKRNAENWSSNLQEWANEFQEMVQNKSIDELHTRTFFDTLYNLK 246 (315)
14273 T ss_dssp HHHHHHHTTCSCCHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHH
14274 T ss_pred HhHhhccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
14275 Confidence 1111133445555555421 13455566666666554
14276
14277
14278 No 327
14279 >5IFE_C Splicing factor 3B subunit 5; pre-mRNA splicing, U2 snRNP, essential; 3.1A {Homo sapiens}
14280 Probab=87.43 E-value=0.036 Score=65.15 Aligned_cols=154 Identities=8% Similarity=0.029 Sum_probs=84.9 Template_Neff=9.800
14281
14282 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
14283 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
14284 .++..++..+. +.+..++..++.+|..++..... .. .... ....+++.+...+... ...+..++.+|..++...
14285 T Consensus 848 ~il~~l~~~l~-d~~~~~r~~a~~~L~~l~~~~~~--~~-~~~~-~~~~li~~ll~~l~~~-~~~r~~al~~L~~l~~~~ 921 (1304)
14286 T 5IFE_C 848 EIISRIVDDLK-DEAEQYRKMVMETIEKIMGNLGA--AD-IDHK-LEEQLIDGILYAFQEQ-TTEDSVMLNGFGTVVNAL 921 (1304)
14287 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhcCh--hh-hHHH-HHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHhC
14288 Confidence 34556666666 35556777788888777653211 00 0001 1123444455444432 356677788887777652
14289
14290
14291 Q NP_000290.2 627 L-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
14292 Q Consensus 627 e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
14293 . . ..++ ..++..+...+.+ .+..++..++.+|..++..............++..|...+.+. ++.++..+
14294 T Consensus 922 ~~~~~~~l-~~l~~~L~~~L~~------~~~~vR~~A~~~L~~l~~~~~~~~~~~~~~~l~~~L~~~L~d~-~~~vr~~a 993 (1304)
14295 T 5IFE_C 922 GKRVKPYL-PQICGTVLWRLNN------KSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEE-YPEVLGSI 993 (1304)
14296 T ss_pred HHHhHHHH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhccCcCHHHHHHHHHHHHHHHhCCC-CHHHHHHH
14297 Confidence 1 1 1111 2355556666655 3678888999999998764222111111123456666666654 56777778
14298
14299
14300 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
14301 Q Consensus 705 L~aLsnL~~~ 714 (747)
14302 +.+|..++..
14303 T Consensus 994 l~aL~~l~~~ 1003 (1304)
14304 T 5IFE_C 994 LGALKAIVNV 1003 (1304)
14305 T ss_pred HHHHHHHHHh
14306 Confidence 7777776644
14307
14308
14309 No 328
14310 >6AHD_1 Pre-mRNA-processing-splicing factor 8, Thioredoxin-like protein; Spliceosome, SPLICING; HET: IHP, GTP; 3.8A {Homo sapiens}
14311 Probab=87.43 E-value=0.036 Score=65.15 Aligned_cols=154 Identities=8% Similarity=0.029 Sum_probs=84.9 Template_Neff=9.800
14312
14313 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
14314 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
14315 .++..++..+. +.+..++..++.+|..++..... .. .... ....+++.+...+... ...+..++.+|..++...
14316 T Consensus 848 ~il~~l~~~l~-d~~~~~r~~a~~~L~~l~~~~~~--~~-~~~~-~~~~li~~ll~~l~~~-~~~r~~al~~L~~l~~~~ 921 (1304)
14317 T 6AHD_1 848 EIISRIVDDLK-DEAEQYRKMVMETIEKIMGNLGA--AD-IDHK-LEEQLIDGILYAFQEQ-TTEDSVMLNGFGTVVNAL 921 (1304)
14318 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhcCh--hh-hHHH-HHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHhC
14319 Confidence 34556666666 35556777788888777653211 00 0001 1123444455444432 356677788887777652
14320
14321
14322 Q NP_000290.2 627 L-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
14323 Q Consensus 627 e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
14324 . . ..++ ..++..+...+.+ .+..++..++.+|..++..............++..|...+.+. ++.++..+
14325 T Consensus 922 ~~~~~~~l-~~l~~~L~~~L~~------~~~~vR~~A~~~L~~l~~~~~~~~~~~~~~~l~~~L~~~L~d~-~~~vr~~a 993 (1304)
14326 T 6AHD_1 922 GKRVKPYL-PQICGTVLWRLNN------KSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEE-YPEVLGSI 993 (1304)
14327 T ss_pred HHHhHHHH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhccCcCHHHHHHHHHHHHHHHhCCC-CHHHHHHH
14328 Confidence 1 1 1111 2355556666655 3678888999999998764222111111123456666666654 56777778
14329
14330
14331 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
14332 Q Consensus 705 L~aLsnL~~~ 714 (747)
14333 +.+|..++..
14334 T Consensus 994 l~aL~~l~~~ 1003 (1304)
14335 T 6AHD_1 994 LGALKAIVNV 1003 (1304)
14336 T ss_pred HHHHHHHHHh
14337 Confidence 7777776644
14338
14339
14340 No 329
14341 >5MU7_A Coatomer subunit beta, Coatomer subunit; coatomer, COPI, beta COP, delta; 2.57A {Chaetomium thermophilum var. thermophilum DSM 1495}
14342 Probab=87.43 E-value=0.031 Score=52.40 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=92.9 Template_Neff=12.800
14343
14344 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL 628 (747)
14345 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~ 628 (747)
14346 ++.++..+. +.++.++..++.+|..+....+. .....++.+...+.+.+..++..++.+|..+......
14347 T Consensus 190 ~~~l~~~l~-~~~~~~~~~a~~~l~~~~~~~~~----------~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~~ 258 (373)
14348 T 5MU7_A 190 LGTVFEGIP-NAEELLQLVEIEFIRKDALHNPQ----------NKPRYLRLIFDLLEANTSTVVYEAASSLTALTNNPVA 258 (373)
14349 T ss_dssp HHHTGGGGG-GSCHHHHHHHHHHHHHHHHHCGG----------GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHCCCHHH
14350 T ss_pred HHHHHhcCC-ChhHHHHHHHHHHHHHHhccCcc----------cHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCHHH
14351 Confidence 455566666 35667777888888887653221 1234566777777777788888888888887743211
14352
14353
14354 Q NP_000290.2 629 HRVMGNQVFPEVTRLLT-SHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
14355 Q Consensus 629 ~~ll~~giI~~Ll~LL~-s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
14356 . ..+++.+...+. + .++.++..++.+|..+....+.. + ...++.+...+.+. ++.++..++.+
14357 T Consensus 259 ---~-~~~~~~l~~~l~~~------~~~~vr~~a~~~l~~l~~~~~~~----~-~~~~~~l~~~l~~~-~~~vr~~a~~~ 322 (373)
14358 T 5MU7_A 259 ---V-KAAAGKFIELAIKE------ADNNVKLIVLDRVDQLRQKNEGI----L-DDLIMEILRVLSSP-DIDVRRKALEI 322 (373)
14359 T ss_dssp ---H-HHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHTTTT----T-GGGHHHHHHGGGSS-CHHHHHHHHHH
14360 T ss_pred ---H-HHHHHHHHHHHhhC------CChhHHHHHHHHHHHHHHhCHHH----H-HHHHHHHHHHhcCC-CHHHHHHHHHH
14361 Confidence 1 134556666665 4 36788889999999887643211 1 13566677777665 77889999999
14362
14363
14364 Q NP_000290.2 708 LSDMWSSKE 716 (747)
14365 Q Consensus 708 LsnL~~~~~ 716 (747)
14366 |..+.....
14367 T Consensus 323 l~~~~~~~~ 331 (373)
14368 T 5MU7_A 323 ALEMVSSKN 331 (373)
14369 T ss_dssp HHTTCCTTT
14370 T ss_pred HHHHhcCCC
14371 Confidence 998876544
14372
14373
14374 No 330
14375 >5VE8_B Kap123, Histone H3; Bidding yeast karyopherin, 23 HEAT; HET: MSE; 2.7A {Kluyveromyces lactis}
14376 Probab=87.41 E-value=0.031 Score=61.14 Aligned_cols=154 Identities=11% Similarity=0.104 Sum_probs=81.3 Template_Neff=12.900
14377
14378 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH-P 626 (747)
14379 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
14380 ++.+...+. ..++.++..++.++..++..... ... ....+++.++..+ .+.++.++..++.++..++.. +
14381 T Consensus 868 ~~~l~~~~~-~~~~~~r~~~~~~l~~l~~~~~~------~~~-~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~ 939 (1116)
14382 T 5VE8_B 868 KPVILQLCQ-SKSKNKRSFAVGALSEIALGMRD------ENP-FIQELLEALIISLTNDKSLEVRCNASYGVGLLIEYSS 939 (1116)
14383 T ss_dssp HHHHHHHTT-CSCHHHHHHHHHHHHHHHHHHGG------GCT-THHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCC
14384 T ss_pred HHHHHHHcC-CCCHHHHHHHHHHHHHHHHhCCC------Cch-hHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhCC
14385 Confidence 333444443 24556677777777777653221 111 1134555555553 345678889999999888865 2
14386
14387
14388 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGN----------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS 695 (747)
14389 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~----------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~ 695 (747)
14390 .. ...+ ..+++.|...+...... ......++..++.+|+.+....+... ....+++.++..+...
14391 T Consensus 940 ~~~~~~~-~~il~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~---~~~~~l~~~~~~l~~~ 1015 (1116)
14392 T 5VE8_B 940 FDVSAIY-SPVLKSLYEILSVADEKNLATEDDEATKEIVDRTFSNVCGCVARMILKHQNLV---PLEHTIPALLSHLPFN 1015 (1116)
14393 T ss_dssp SCCHHHH-HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHHHHCGGGS---CHHHHHHHHHTTCSCS
14394 T ss_pred cchhhhH-HHHHHHHHHHhcchhHhccCCCCchhhHHHHHHHHHHHHHHHHHHHHHCcccC---CHHHHHHHHHhcCCCC
14395 Confidence 11 1111 23555566555431000 00245667788888888876533211 1123455555555322
14396
14397
14398 Q NP_000290.2 696 ASPKAAEAARLLLSDMWSS 714 (747)
14399 Q Consensus 696 ~d~eVr~aAL~aLsnL~~~ 714 (747)
14400 .+...+..++.+|..+...
14401 T Consensus 1016 ~~~~~~~~~~~~l~~l~~~ 1034 (1116)
14402 T 5VE8_B 1016 TAFEEYDPIFKLFLKLFQE 1034 (1116)
14403 T ss_dssp SCGGGHHHHHHHHHHHHHT
14404 T ss_pred CchhhhHHHHHHHHHHHHh
14405 Confidence 1455666677777766543
14406
14407
14408 No 331
14409 >2IX8_A ELONGATION FACTOR 3A; NUCLEOTIDE-BINDING, PROTEIN BIOSYNTHESIS, PHOSPHORYLATION, ELONGATION; 6.0A {SACCHAROMYCES CEREVISIAE}
14410 Probab=87.28 E-value=0.034 Score=61.28 Aligned_cols=150 Identities=9% Similarity=0.007 Sum_probs=99.4 Template_Neff=11.800
14411
14412 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
14413 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
14414 .+++.|...+. +.++.++..++.+|..+...... .... ....+++.|...+.+.++.++..|+.+|..++...
14415 T Consensus 48 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~ 120 (976)
14416 T 2IX8_A 48 HFFGELAKGIK-DKKTAANAMQAVAHIANQSNLSP-----SVEP-YIVQLVPAICTNAGNKDKEIQSVASETLISIVNAV 120 (976)
14417 T ss_dssp HHHHHHHHHHT-STTTHHHHHHHHHHHSCTTTCCT-----TTHH-HHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHS
14418 T ss_pred HHHHHHHHHcc-CHHHHHHHHHHHHHHHHHhccCc-----ccHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhc
14419 Confidence 45677777777 46677888888888888753221 0111 12356777777888888889999999999887652
14420
14421
14422 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLL-TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
14423 Q Consensus 627 e~~~ll~~giI~~Ll~LL-~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
14424 .... ...+++.|...+ .+ .++.++..++.+|..++...+....... ..+++.+..++.+. +..++..++
14425 T Consensus 121 ~~~~--~~~~l~~l~~~l~~~------~~~~vr~~al~~L~~l~~~~~~~~~~~~-~~~~~~l~~~l~d~-~~~vr~~a~ 190 (976)
14426 T 2IX8_A 121 NPVA--IKALLPHLTNAIVET------NKWQEKIAILAAFSAMVDAAKDQVALRM-PELIPVLSETMWDT-KKEVKAAAT 190 (976)
14427 T ss_dssp CGGG--HHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHSHHHHHHHH-HHHHHHHHHHTTCS-CHHHHHHHH
14428 T ss_pred CHHH--HHHHHHHHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHHhHHhhc-hhHHHHHHHhhcCC-CHHHHHHHH
14429 Confidence 1111 123556666666 33 3567888899999988864322211111 24677777777766 788899999
14430
14431
14432 Q NP_000290.2 706 LLLSDMWS 713 (747)
14433 Q Consensus 706 ~aLsnL~~ 713 (747)
14434 .+|..+..
14435 T Consensus 191 ~~l~~l~~ 198 (976)
14436 T 2IX8_A 191 AAMTKATE 198 (976)
14437 T ss_dssp HHHHHHST
14438 T ss_pred HHHHHHHH
14439 Confidence 99888876
14440
14441
14442 No 332
14443 >3WOY_A CLIP-associating protein 2; HEAT Repeat, Microtubule binding, Tubulin; 2.1A {Homo sapiens}
14444 Probab=87.26 E-value=0.034 Score=50.12 Aligned_cols=147 Identities=14% Similarity=0.116 Sum_probs=92.3 Template_Neff=11.900
14445
14446 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14447 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14448 .++.+...+. +.+..++..++.++..++..... ....+ -..+++.+...+.+....++..+..++..++....
14449 T Consensus 78 l~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~-----~~~~~-~~~l~~~l~~~l~~~~~~vr~~a~~~l~~i~~~~~ 150 (251)
14450 T 3WOY_A 78 LDGALKLSAK-DLRSQVVREACITVAHLSTVLGN-----KFDHG-AEAIVPTLFNLVPNSAKVMATSGCAAIRFIIRHTH 150 (251)
14451 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHCc-----ccHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCC
14452 Confidence 4555666666 46678888899999888764321 01111 13456667777766677788888888888875421
14453
14454
14455 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL-AKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
14456 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~-~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
14457 . ..+++.+...+.+ .++.++..++.++..++...... .... -..+++.+...+.+. +..++..++.
14458 T Consensus 151 ~-----~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~-~~~i~~~l~~~l~d~-~~~vr~~a~~ 217 (251)
14459 T 3WOY_A 151 V-----PRLIPLITSNCTS------KSVPVRRRSFEFLDLLLQEWQTHSLERH-AAVLVETIKKGIHDA-DAEARVEARK 217 (251)
14460 T ss_pred H-----hhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHCHHhhHHh-HHHHHHHHHHHhcCC-CHHHHHHHHH
14461 Confidence 1 1244455555554 35677888888888887542211 1111 123566677777766 7889999999
14462
14463
14464 Q NP_000290.2 707 LLSDMWSS 714 (747)
14465 Q Consensus 707 aLsnL~~~ 714 (747)
14466 ++..+...
14467 T Consensus 218 ~l~~l~~~ 225 (251)
14468 T 3WOY_A 218 TYMGLRNH 225 (251)
14469 T ss_pred HHHHHHHH
14470 Confidence 88887754
14471
14472
14473 No 333
14474 >5DN7_A Protein FAM179B; TOG domain, STRUCTURAL PROTEIN; 2.2A {Mus musculus}
14475 Probab=87.22 E-value=0.035 Score=51.97 Aligned_cols=146 Identities=10% Similarity=0.046 Sum_probs=94.2 Template_Neff=11.400
14476
14477 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14478 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14479 .++.+...+. +.++.++..++.+|..++..... .... .-..+++.|...+.+.+..++..++.+|..+.....
14480 T Consensus 67 l~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-----~~~~-~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 139 (293)
14481 T 5DN7_A 67 FISLLYNLLD-DSNFKVVHGTLQVLHLLVIRLGE-----QVQQ-FLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKEVG 139 (293)
14482 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHGG-----GGGG-GHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHC
14483 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH-----HHHH-HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHC
14484 Confidence 4555666666 46778888889888888764221 0111 113467777777777778888889998888875311
14485
14486
14487 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
14488 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
14489 . ..+++.+...+.+ .++.++..++.++..+........ ..-..+++.+...+.+. +..++..++.+
14490 T Consensus 140 ~-----~~~~~~l~~~l~~------~~~~vr~~al~~l~~l~~~~~~~~--~~~~~~~~~l~~~l~d~-~~~vr~~a~~~ 205 (293)
14491 T 5DN7_A 140 P-----QRVLSLLLENLKH------KHSRVREEVVNICICSLLTYPSED--FDLPKLSFDLAPALVDS-KRRVRQAALEA 205 (293)
14492 T ss_dssp H-----HHHHHHHHGGGGC------SCHHHHHHHHHHHHHHHHHSCGGG--SCHHHHHHHHGGGGGCS-SHHHHHHHHHH
14493 T ss_pred H-----HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhCCccc--CCHHHHHHHHHHHhcCC-CHHHHHHHHHH
14494 Confidence 1 1244555555554 367788888888888876432211 11124566677777766 78888889888
14495
14496
14497 Q NP_000290.2 708 LSDMWSS 714 (747)
14498 Q Consensus 708 LsnL~~~ 714 (747)
14499 +..+...
14500 T Consensus 206 l~~l~~~ 212 (293)
14501 T 5DN7_A 206 FAVLASS 212 (293)
14502 T ss_dssp HHHHHHH
14503 T ss_pred HHHHHHH
14504 Confidence 8887653
14505
14506
14507 No 334
14508 >4HM9_A Beta-catenin-like protein 1; all alpha-helical, armadillo repeats, PROTEIN; 3.1001A {Homo sapiens}
14509 Probab=87.21 E-value=0.04 Score=59.57 Aligned_cols=135 Identities=14% Similarity=0.062 Sum_probs=91.1 Template_Neff=8.100
14510
14511 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDE---------SAKQQVYQLGGICKLVDLLRS------PNQNVQQAAAGA 310 (747)
14512 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~---------~~~~~li~~~IL~~Ll~lL~s------~d~eVr~~AL~a 310 (747)
14513 .++.|+.++.+.+..+...++.+|..+..... .....+...++++.|+..+.. .+...+..++.+
14514 T Consensus 147 ~i~~Lv~LL~~~n~di~~~a~~~L~~Lt~~~~~~~~~~~~~~l~~~l~e~g~l~~Lv~~L~~l~e~~~~d~~~~~~al~i 226 (568)
14515 T 4HM9_A 147 AVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAI 226 (568)
14516 T ss_dssp HHHHHHHGGGCSSHHHHHHHHHHHHHHTCHHHHTTCHHHHHHHHHHHHHTTHHHHHHHHHTTCCTTSHHHHHHHHHHHHH
14517 T ss_pred hHHHHHHHhCCCCHHHHHHHHHHHHHHhCCccccCChhhHHHHHHHHHhCCHHHHHHHHHhcccccccchHHHHHHHHHH
14518 Confidence 45566677776667788888888888875432 112333445677777777765 455677888999
14519
14520
14521 Q NP_000290.2 311 LRNLVFRSTTNKLETRRQNGIREAVSLLRRTG--NAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVII 381 (747)
14522 Q Consensus 311 Ls~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~--d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
14523 |.+++...+.....+...+++..|+.++. .. ....+..+..+|..|+.. ......+.. ++++.|+.+|..
14524 T Consensus 227 L~nL~~~~~~~~~~i~~~g~l~~Ll~lL~-~~~~~~~~k~~AaeiL~~L~~~~~~~r~~l~~~g~I~~LL~lL~~ 300 (568)
14525 T 4HM9_A 227 VENMAEFRPEMCTEGAQQGLLQWLLKRLK-AKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSV 300 (568)
14526 T ss_dssp HHHHHHHCGGGHHHHCCCCCHHHHHHHHH-SSCCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHGG
14527 T ss_pred HHHHhccCHHHHHHHHHCCHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCchHHHHHHHHHh
14528 Confidence 99888653332223344567888888886 33 456788899999999875 344444444 888989988864
14529
14530
14531 No 335
14532 >6S47_Bi 60S ribosomal protein L2-A, 60S; New1, ABCF, Ribosomal Protein, Recycling; HET: ATP; 3.28A {Saccharomyces cerevisiae}
14533 Probab=87.16 E-value=0.035 Score=61.24 Aligned_cols=155 Identities=12% Similarity=0.055 Sum_probs=101.1 Template_Neff=11.700
14534
14535 Q NP_000290.2 546 SDAIRTYLNLMGKS-KKDATLEACAGALQNLTASK-GLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
14536 Q Consensus 546 ~G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s-~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
14537 .++++.|..++. + .++.++..++.+|..++... .. . ....+. ..+++.|...+.+.++.++..++.+|..++
14538 T Consensus 42 ~~il~~l~~~l~-~~~~~~vr~~a~~~L~~l~~~~~~~---~-~~~~~~-~~~~~~l~~~l~~~~~~vr~~a~~~L~~l~ 115 (972)
14539 T 6S47_Bi 42 WKIVDVLSKFIK-PKNPSLVRESAMLIISNIAQFFSGK---P-PQEAYL-LPFFNVALDCISDKENTVKRAAQHAIDSLL 115 (972)
14540 T ss_pred ccHHHHHHHHcC-CCCCHHHHHHHHHHHHHHHhcCCCh---h-hcHHHH-HHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
14541 Confidence 346777777777 4 56778888999998887643 10 0 001111 236777778888778889999999999887
14542
14543
14544 Q NP_000290.2 624 RHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
14545 Q Consensus 624 ~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
14546 ..... ......+++.|..++.+. .++.++..++.+|+.++..............+++.|+..+.+. ++.++..
14547 T Consensus 116 ~~~~~-~~~~~~~~~~l~~~l~~~-----~~~~vr~~a~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~l~d~-~~~vr~~ 188 (972)
14548 T 6S47_Bi 116 NCFPM-EALTCFVLPTILDYLSSG-----AKWQAKMAALSVVDRIREDSANDLLELTFKDAVPVLTDVATDF-KPELAKQ 188 (972)
14549 T ss_pred hcCCH-HhhHhchHHHHHHHcCCC-----CCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCC-CHHHHHH
14550 Confidence 65111 111113566677776652 1278889999999998554322211112234677777788766 7889999
14551
14552
14553 Q NP_000290.2 704 ARLLLSDMWS 713 (747)
14554 Q Consensus 704 AL~aLsnL~~ 713 (747)
14555 ++.+|..+..
14556 T Consensus 189 a~~~L~~l~~ 198 (972)
14557 T 6S47_Bi 189 GYKTLLDYVS 198 (972)
14558 T ss_pred HHHHHHHHHH
14559 Confidence 9999988775
14560
14561
14562 No 336
14563 >6QH5_B AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
14564 Probab=87.12 E-value=0.034 Score=55.81 Aligned_cols=142 Identities=13% Similarity=0.105 Sum_probs=94.9 Template_Neff=12.900
14565
14566 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14567 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14568 .++.++..+. ++++.++..++.+|..+....+. . ...+++.+...+.+.++.++..++.+|..+.....
14569 T Consensus 50 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 118 (592)
14570 T 6QH5_B 50 LFPDVVNCMQ-TDNLELKKLVYLYLMNYAKSQPD--------M--AIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKI 118 (592)
14571 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCHH--------H--HHHHHHHHHHHccCCCHHHHHHHHHHHHHHcchhh
14572 Confidence 4555666666 46677888888888887654221 1 13456667777778888899999999888765311
14573
14574
14575 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
14576 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
14577 ...+++.+...+.+ .++.++..++.+|..+....+.. ......++.+...+.+. ++.++..++.+
14578 T Consensus 119 -----~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~---~~~~~~~~~l~~~l~d~-~~~vr~~a~~~ 183 (592)
14579 T 6QH5_B 119 -----TEYLCEPLRKCLKD------EDPYVRKTAAVCVAKLHDINAQM---VEDQGFLDSLRDLIADS-NPMVVANAVAA 183 (592)
14580 T ss_pred -----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCchh---hcCccHHHHHHHHhCCC-CHHHHHHHHHH
14581 Confidence 12345556666655 36788899999999887643221 12234567777777765 77888889888
14582
14583
14584 Q NP_000290.2 708 LSDMWSSK 715 (747)
14585 Q Consensus 708 LsnL~~~~ 715 (747)
14586 |..+....
14587 T Consensus 184 l~~~~~~~ 191 (592)
14588 T 6QH5_B 184 LSEISESH 191 (592)
14589 T ss_pred HHHHHhcC
14590 Confidence 88887654
14591
14592
14593 No 337
14594 >5A1V_G ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT; TRANSPORT PROTEIN, COPI, COATOMER, COATED; 21.0A {SACCHAROMYCES CEREVISIAE}
14595 Probab=87.07 E-value=0.037 Score=61.89 Aligned_cols=105 Identities=19% Similarity=0.265 Sum_probs=67.3 Template_Neff=10.900
14596
14597 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH 625 (747)
14598 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~ 625 (747)
14599 ..++.|..++. +.++.++..|+.+|..+..... . ....+..++..+ .+.+..++..++.+|..+...
14600 T Consensus 259 ~~~~~L~~~l~-~~~~~vr~~a~~~L~~l~~~~~---------~--~~~~~~~l~~~l~~~~~~~vr~~al~~L~~l~~~ 326 (968)
14601 T 5A1V_G 259 RFIRCIYNLLQ-SSSPAVKYEAAGTLVTLSSAPT---------A--IKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEH 326 (968)
14602 T ss_dssp HHHHHHHHSCC-SSSCSSCCTTHHHHTGGGCSTH---------H--HHHHHHHHHHHHHCCCCCCTTCCCCSCSSSSCSC
14603 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHhCCCHH---------H--HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHhhC
14604 Confidence 35666777777 4667788888888887765311 0 123455566666 566778888999999988753
14605
14606
14607 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
14608 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
14609 +.....+ ..+++.+...+.+ .+..++..++.+|..+..
14610 T Consensus 327 ~~~~~~~-~~~~~~l~~~l~~------~~~~vr~~al~~L~~l~~ 364 (968)
14611 T 5A1V_G 327 PAHERVL-QDLVMDILRVLST------PDLEVRKKTLQLALDLVS 364 (968)
14612 T ss_dssp CSSCSSC-SHHHHHHTSCSSS------SCHHHHHHHHHHHHHHSS
14613 T ss_pred cchHHHH-HHHHHHHHHHhCC------CCHHHHHHHHHHHHHHcC
14614 Confidence 2211111 2345556666655 356788888888888765
14615
14616
14617 No 338
14618 >3TJZ_B ADP-ribosylation factor 1, Coatomer subunit; protein trafficking, Golgi membrane, protein; HET: GNP; 2.9A {Saccharomyces cerevisiae}
14619 Probab=86.96 E-value=0.036 Score=52.53 Aligned_cols=16 Identities=25% Similarity=-0.029 Sum_probs=8.2 Template_Neff=12.100
14620
14621 Q NP_000290.2 697 SPKAAEAARLLLSDMW 712 (747)
14622 Q Consensus 697 d~eVr~aAL~aLsnL~ 712 (747)
14623 ++.++..++.+|..+.
14624 T Consensus 225 ~~~~~~~~~~~l~~~~ 240 (355)
14625 T 3TJZ_B 225 SPFAYCMMIRVASRQL 240 (355)
14626 T ss_pred CHHHHHHHHHHHHHhC
14627 Confidence 4445555555555544
14628
14629
14630 No 339
14631 >2IW3_B ELONGATION FACTOR 3A; ACETYLATION, ATP-BINDING, ELONGATION FACTOR, PROTEIN; HET: MSE, ADP, SO4; 2.4A {SACCHAROMYCES CEREVISIAE}
14632 Probab=86.93 E-value=0.037 Score=61.15 Aligned_cols=151 Identities=9% Similarity=0.010 Sum_probs=98.6 Template_Neff=11.700
14633
14634 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
14635 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
14636 .+++.|+..+. +.++.++..++.++..+...... .... ....+++.+...+.+.++.++..++.+|..++...
14637 T Consensus 54 ~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~d~~~~vr~~a~~~L~~l~~~~ 126 (986)
14638 T 2IW3_B 54 HFFGELAKGIK-DKKTAANAMQAVAHIANQSNLSP-----SVEP-YIVQLVPAICTNAGNKDKEIQSVASETLISIVNAV 126 (986)
14639 T ss_dssp HHHHHHHHHHT-STTTHHHHHHHHHHHSCTTTCCT-----TTHH-HHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHS
14640 T ss_pred HHHHHHHHhhc-CHHHHHHHHHHHHHHHHhccCCc-----chHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhc
14641 Confidence 35666777776 35566676777777766643221 1111 12356777788888788889999999999887652
14642
14643
14644 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLL-TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
14645 Q Consensus 627 e~~~ll~~giI~~Ll~LL-~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
14646 .... ...+++.+...+ .+ .++.++..++.+|..++...+....... ..+++.|..++.+. +..++..|+
14647 T Consensus 127 ~~~~--~~~~l~~l~~~l~~~------~~~~vr~~al~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~d~-~~~vr~~a~ 196 (986)
14648 T 2IW3_B 127 NPVA--IKALLPHLTNAIVET------NKWQEKIAILAAFSAMVDAAKDQVALRM-PELIPVLSETMWDT-KKEVKAAAT 196 (986)
14649 T ss_dssp CGGG--HHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHSHHHHHHHH-HHHHHHHHHHTTCS-CHHHHHHHH
14650 T ss_pred CHHH--HHHHHHHHHHHHhhc------CCHHHHHHHHHHHHHHHHHCHHHHHhhH-HHHHHHHHHhcCcC-CHHHHHHHH
14651 Confidence 2111 224566677777 44 3678889999999988865332221111 34677788888766 778999999
14652
14653
14654 Q NP_000290.2 706 LLLSDMWSS 714 (747)
14655 Q Consensus 706 ~aLsnL~~~ 714 (747)
14656 .+|..++..
14657 T Consensus 197 ~~l~~l~~~ 205 (986)
14658 T 2IW3_B 197 AAMTKATET 205 (986)
14659 T ss_dssp HHHHHHGGG
14660 T ss_pred HHHHHHHHh
14661 Confidence 999888764
14662
14663
14664 No 340
14665 >5NZR_B Coatomer subunit alpha, Coatomer subunit; COPI, coatomer, coated vesicles, Transport; 9.2A {Mus musculus}
14666 Probab=86.79 E-value=0.04 Score=61.63 Aligned_cols=105 Identities=19% Similarity=0.265 Sum_probs=67.8 Template_Neff=10.900
14667
14668 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH 625 (747)
14669 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~ 625 (747)
14670 ..++.|..++. +.++.++..|+.+|..+..... . ....+..++..+ .+.+..++..++.+|..+...
14671 T Consensus 259 ~~~~~L~~~l~-~~~~~vr~~a~~~L~~l~~~~~---------~--~~~~~~~l~~~l~~~~~~~vr~~al~~L~~l~~~ 326 (968)
14672 T 5NZR_B 259 RFIRCIYNLLQ-SSSPAVKYEAAGTLVTLSSAPT---------A--IKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEH 326 (968)
14673 T ss_dssp HHHHHHHHHTS-CCSHHHHHHHHHHHHHHCCCHH---------H--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCC
14674 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHhCCCHH---------H--HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHhhC
14675 Confidence 35667777777 4667788888888887765311 0 123455566666 566788899999999988753
14676
14677
14678 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
14679 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
14680 ......+ ..+++.+...+.+ .+..++..++.+|..+..
14681 T Consensus 327 ~~~~~~~-~~~~~~l~~~l~~------~~~~vr~~al~~L~~l~~ 364 (968)
14682 T 5NZR_B 327 PAHERVL-QDLVMDILRVLST------PDLEVRKKTLQLALDLVS 364 (968)
14683 T ss_dssp TTCCHHH-HHHHHHHHHGGGS------CCHHHHHHHHHHHHTTCS
14684 T ss_pred cchHHHH-HHHHHHHHHHhCC------CCHHHHHHHHHHHHHHcC
14685 Confidence 2211111 2345556666655 356788888888888765
14686
14687
14688 No 341
14689 >4P6Z_B BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
14690 Probab=86.78 E-value=0.037 Score=55.91 Aligned_cols=142 Identities=14% Similarity=0.108 Sum_probs=93.4 Template_Neff=12.700
14691
14692 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14693 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14694 .++.++..+. +.++.++..++.+|..+....+. . ...+++.+...+.+.++.++..|+.+|..+.....
14695 T Consensus 66 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 134 (600)
14696 T 4P6Z_B 66 LFPDVVNCMQ-TDNLELKKLVYLYLMNYAKSQPD--------M--AIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKI 134 (600)
14697 T ss_pred hHHHHHHhcc-CCCHHHHHHHHHHHHHhccCCHh--------H--HHHHHHHHHHHccCCCHHHHHHHHHHHhcCCchHH
14698 Confidence 4455666666 46677888888888877653221 1 12355666667777788888889888888764311
14699
14700
14701 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
14702 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
14703 ...+++.+...+.+ .++.++..++.+|..+....+.. +....+++.+...+.+. ++.++..++.+
14704 T Consensus 135 -----~~~~~~~l~~~l~~------~~~~vr~~a~~~L~~l~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 199 (600)
14705 T 4P6Z_B 135 -----TEYLCEPLRKCLKD------EDPYVRKTAAVCVAKLHDINAQL---VEDQGFLDTLKDLISDS-NPMVVANAVAA 199 (600)
14706 T ss_pred -----HHHHHHHHHHhcCC------CCHHHHHHHHHHHHHHHhhChHH---hhccChHHHHHHHhcCC-CHHHHHHHHHH
14707 Confidence 12345556666655 36788899999999887643221 11234567777777766 77888999998
14708
14709
14710 Q NP_000290.2 708 LSDMWSSK 715 (747)
14711 Q Consensus 708 LsnL~~~~ 715 (747)
14712 |..+....
14713 T Consensus 200 l~~l~~~~ 207 (600)
14714 T 4P6Z_B 200 LSEIAESH 207 (600)
14715 T ss_pred HHHHHhhC
14716 Confidence 88887653
14717
14718
14719 No 342
14720 >5VCH_A Kap123; Bidding yeast karyopherin, 23 HEAT; HET: MSE; 2.35A {Kluyveromyces lactis}
14721 Probab=86.69 E-value=0.038 Score=60.48 Aligned_cols=153 Identities=11% Similarity=0.110 Sum_probs=80.3 Template_Neff=12.900
14722
14723 Q NP_000290.2 550 RTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH-PL 627 (747)
14724 Q Consensus 550 ~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~-~e 627 (747)
14725 +.+...+. +.++.++..++.++..++..... ... ....+++.++..+ .+.++.++..++.++..+... +.
14726 T Consensus 869 ~~l~~~~~-~~~~~~r~~~~~~l~~l~~~~~~------~~~-~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~ 940 (1116)
14727 T 5VCH_A 869 PVILQLCQ-SKSKNKRSFAVGALSEIALGMRD------ENP-FIQELLEALIISLTNDKSLEVRCNASYGVGLLIEYSSF 940 (1116)
14728 T ss_dssp HHHHHHTT-CSCHHHHHHHHHHHHHHHHHHGG------GCT-THHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCCS
14729 T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHhCCC------Cch-hHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCc
14730 Confidence 33444443 24456677777777777653221 111 1134555555553 345678888999999888765 21
14731
14732
14733 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGN----------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
14734 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~----------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
14735 . ...+ ..+++.+...+...... ......++..++.+|+.+....+... .-..+++.++..+....
14736 T Consensus 941 ~~~~~~-~~il~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~---~~~~~l~~~~~~l~~~~ 1016 (1116)
14737 T 5VCH_A 941 DVSAIY-SPVLKSLYEILSVADEKNLATEDDEATKEIVDRTFSNVCGCVARMILKHQNLV---PLEHTIPALLSHLPFNT 1016 (1116)
14738 T ss_dssp CCHHHH-HHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHHHCGGGS---CHHHHHHHHHTTCSCSS
14739 T ss_pred chhhhH-HHHHHHHHHHhcchhHhccCCCCchhhHHHHHHHHHHHHHHHHHHHHHCcccC---CHHHHHHHHHhcCCCCC
14740 Confidence 1 1111 23555565555421000 00245667788888888876533211 11234555555553221
14741
14742
14743 Q NP_000290.2 697 SPKAAEAARLLLSDMWSS 714 (747)
14744 Q Consensus 697 d~eVr~aAL~aLsnL~~~ 714 (747)
14745 +...+..++.+|..+...
14746 T Consensus 1017 ~~~~~~~~~~~l~~l~~~ 1034 (1116)
14747 T 5VCH_A 1017 AFEEYDPIFKLFLKLFQE 1034 (1116)
14748 T ss_dssp CGGGHHHHHHHHHHHHHT
14749 T ss_pred chhhhHHHHHHHHHHHHh
14750 Confidence 455666677777666653
14751
14752
14753 No 343
14754 >6BCU_A mTOR, Target of rapamycin complex; PIKK, TRANSFERASE; HET: ATP, GTP; 3.43A {Homo sapiens}
14755 Probab=86.66 E-value=0.04 Score=67.95 Aligned_cols=131 Identities=8% Similarity=0.114 Sum_probs=72.7 Template_Neff=11.600
14756
14757 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-L 627 (747)
14758 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e 627 (747)
14759 ++.|...+.+.....++..++.+|..++..... ....+ -..+++.+...+.+.++.++..++.+|+.++... .
14760 T Consensus 952 ~~~l~~~l~~~~~~~~~~~a~~~l~~i~~~~~~-----~~~~~-l~~l~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~ 1025 (2549)
14761 T 6BCU_A 952 MVALMRIFRDQSLSHHHTMVVQAITFIFKSLGL-----KCVQF-LPQVMPTFLNVIRVCDGAIREFLFQQLGMLVSFVKS 1025 (2549)
14762 T ss_dssp HHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHTT-----GGGGG-HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHGG
14763 T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHcCc-----chHHh-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
14764 Confidence 555666665222345777888888888764321 11111 2456777778887777788888999998887541 1
14765
14766
14767 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRS 694 (747)
14768 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s 694 (747)
14769 . ..+. ..+++.+..++.. ...++..++.+|..++........... ..+++.++..+.+
14770 T Consensus 1026 ~~~~~~-~~i~~~l~~~~~~-------~~~v~~~~~~~l~~l~~~~~~~~~~~~-~~l~~~l~~~l~~ 1084 (2549)
14771 T 6BCU_A 1026 HIRPYM-DEIVTLMREFWVM-------NTSIQSTIILLIEQIVVALGGEFKLYL-PQLIPHMLRVFMH 1084 (2549)
14772 T ss_dssp GGGGGH-HHHHHHHHHTCCS-------CHHHHHHHHHHHHHHHHHHGGGGGGTH-HHHHHHHHHHHHS
14773 T ss_pred hcHHhH-HHHHHHHHHHHhc-------CHHHHHHHHHHHHHHHHHhcHhhHhHH-HHHHHHHHHHHhc
14774 Confidence 1 1111 2234444444433 244677788888887654222111111 2345555555543
14775
14776
14777 No 344
14778 >6BCX_B mTOR, Target of rapamycin complex; PIKK, TRANSFERASE; HET: ATP; 3.0A {Homo sapiens}
14779 Probab=86.66 E-value=0.04 Score=67.95 Aligned_cols=131 Identities=8% Similarity=0.114 Sum_probs=72.7 Template_Neff=11.600
14780
14781 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-L 627 (747)
14782 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e 627 (747)
14783 ++.|...+.+.....++..++.+|..++..... ....+ -..+++.+...+.+.++.++..++.+|+.++... .
14784 T Consensus 952 ~~~l~~~l~~~~~~~~~~~a~~~l~~i~~~~~~-----~~~~~-l~~l~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~ 1025 (2549)
14785 T 6BCX_B 952 MVALMRIFRDQSLSHHHTMVVQAITFIFKSLGL-----KCVQF-LPQVMPTFLNVIRVCDGAIREFLFQQLGMLVSFVKS 1025 (2549)
14786 T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHcCc-----chHHh-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
14787 Confidence 555666665222345777888888888764321 11111 2456777778887777788888999998887541 1
14788
14789
14790 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRS 694 (747)
14791 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s 694 (747)
14792 . ..+. ..+++.+..++.. ...++..++.+|..++........... ..+++.++..+.+
14793 T Consensus 1026 ~~~~~~-~~i~~~l~~~~~~-------~~~v~~~~~~~l~~l~~~~~~~~~~~~-~~l~~~l~~~l~~ 1084 (2549)
14794 T 6BCX_B 1026 HIRPYM-DEIVTLMREFWVM-------NTSIQSTIILLIEQIVVALGGEFKLYL-PQLIPHMLRVFMH 1084 (2549)
14795 T ss_pred hcHHhH-HHHHHHHHHHHhc-------CHHHHHHHHHHHHHHHHHhcHhhHhHH-HHHHHHHHHHHhc
14796 Confidence 1 1111 2234444444433 244677788888887654222111111 2345555555543
14797
14798
14799 No 345
14800 >5IFE_C Splicing factor 3B subunit 5; pre-mRNA splicing, U2 snRNP, essential; 3.1A {Homo sapiens}
14801 Probab=86.43 E-value=0.045 Score=64.20 Aligned_cols=110 Identities=15% Similarity=0.148 Sum_probs=59.4 Template_Neff=9.800
14802
14803 Q NP_000290.2 249 KAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ 328 (747)
14804 Q Consensus 249 ~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~ 328 (747)
14805 .+...+.+.+..++..++.+|..++..........+...++..+...+.+.+..++..++.+|..++.............
14806 T Consensus 935 ~L~~~L~~~~~~vR~~A~~~L~~l~~~~~~~~~~~~~~~l~~~L~~~L~d~~~~vr~~al~aL~~l~~~~~~~~l~~~l~ 1014 (1304)
14807 T 5IFE_C 935 TVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIK 1014 (1304)
14808 T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHhccCcCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhChHHhcccHH
14809 Confidence 33344445566777778888877765322111111112345556666665566777777777777764432111001112
14810
14811
14812 Q NP_000290.2 329 NGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
14813 Q Consensus 329 ~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
14814 .+++.+...+. ..+..++..++.++..++.
14815 T Consensus 1015 ~ll~~L~~~L~-~~~~~Vr~~ai~~L~~i~~ 1044 (1304)
14816 T 5IFE_C 1015 DLLPRLTPILK-NRHEKVQENCIDLVGRIAD 1044 (1304)
14817 T ss_pred hHHHHHHHHhC-CCCHHHHHHHHHHHHHHHh
14818 Confidence 35555666665 4455667777777776665
14819
14820
14821 No 346
14822 >6AHD_1 Pre-mRNA-processing-splicing factor 8, Thioredoxin-like protein; Spliceosome, SPLICING; HET: IHP, GTP; 3.8A {Homo sapiens}
14823 Probab=86.43 E-value=0.045 Score=64.20 Aligned_cols=110 Identities=15% Similarity=0.148 Sum_probs=59.4 Template_Neff=9.800
14824
14825 Q NP_000290.2 249 KAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ 328 (747)
14826 Q Consensus 249 ~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~ 328 (747)
14827 .+...+.+.+..++..++.+|..++..........+...++..+...+.+.+..++..++.+|..++.............
14828 T Consensus 935 ~L~~~L~~~~~~vR~~A~~~L~~l~~~~~~~~~~~~~~~l~~~L~~~L~d~~~~vr~~al~aL~~l~~~~~~~~l~~~l~ 1014 (1304)
14829 T 6AHD_1 935 TVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIK 1014 (1304)
14830 T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHhccCcCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhChHHhcccHH
14831 Confidence 33344445566777778888877765322111111112345556666665566777777777777764432111001112
14832
14833
14834 Q NP_000290.2 329 NGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
14835 Q Consensus 329 ~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
14836 .+++.+...+. ..+..++..++.++..++.
14837 T Consensus 1015 ~ll~~L~~~L~-~~~~~Vr~~ai~~L~~i~~ 1044 (1304)
14838 T 6AHD_1 1015 DLLPRLTPILK-NRHEKVQENCIDLVGRIAD 1044 (1304)
14839 T ss_pred hHHHHHHHHhC-CCCHHHHHHHHHHHHHHHh
14840 Confidence 35555666665 4455667777777776665
14841
14842
14843 No 347
14844 >6LTJ_L Histone H3.2, Histone H4, Histone; Chromatin remodeler, Complex, GENE REGULATION; 3.7A {Xenopus laevis}
14845 Probab=86.40 E-value=0.056 Score=63.52 Aligned_cols=152 Identities=14% Similarity=0.061 Sum_probs=89.3 Template_Neff=5.100
14846
14847 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-----NSD----------VVRSGASLLSNMSRHPL 627 (747)
14848 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-----d~e----------Vr~~AL~aLsnLa~~~e 627 (747)
14849 .+++.++.+|.+|+....- .. ....+ ...++..|+.++... ++. .+..|+.+|+.|+..+.
14850 T Consensus 1065 ~LRenaLviLaNIAg~LdL--s~-~~e~I-~~~ild~LLhwlv~~sa~a~Dp~~~~~~~~~lSp~~lALEaLsKLsv~d~ 1140 (1295)
14851 T 6LTJ_L 1065 MLRENTLVTLANISGQLDL--SP-YPESI-CLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDN 1140 (1295)
14852 T ss_dssp HHHHHHHHHHHHHGGGCCC--SS-SCHHH-HHHHHHHHHHHHHCCSSSSSSCCTTSCTTCCCCHHHHHHHHHHHHHTSHH
14853 T ss_pred HHHHHHHHHHHHHHcccCC--CC-CChHh-HHHHHHHHHHHHcCcChhcCChhhccCCCCCCCHHHHHHHHHHHHhCCCc
14854 Confidence 4566788888888764220 00 01111 112455555554321 111 12348899999987643
14855
14856
14857 Q NP_000290.2 628 LH-RVMG-------NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK-QYFSSSMLNNIINLCRSSA-- 696 (747)
14858 Q Consensus 628 ~~-~ll~-------~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~-~Lve~giL~~Ll~LL~s~~-- 696 (747)
14859 +. .++. ..++..|+.+|... .+..+++.++.+|.+|+........ ...+.+.+..|+.+|+...
14860 T Consensus 1141 N~dlLlat~p~srle~Ll~~LV~lL~~~-----ed~~lrE~AL~lL~~Ls~~~~~~ar~ia~~~g~I~~LV~fLE~~~~~ 1215 (1295)
14861 T 6LTJ_L 1141 NVDLILATPPFSRLEKLYSTMVRFLSDR-----KNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAA 1215 (1295)
14862 T ss_dssp HHHHHHTSSCHHHHHHHHHHHHHHHHHC-----SSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHHHHHHH
14863 T ss_pred hHHHHHhCCCHHHHHHHHHHHHHHhcCC-----CCHHHHHHHHHHHHHHHcCCHHHHHHHHHhcCHHHHHHHHHHHHHHH
14864 Confidence 32 2222 23566677777652 2456788999999999875433322 3334567888888876430
14865
14866
14867 Q NP_000290.2 697 ---------------------SPKAAEAARLLLSDMWSSKELQGVLRQ 723 (747)
14868 Q Consensus 697 ---------------------d~eVr~aAL~aLsnL~~~~~~~~~~~~ 723 (747)
14869 ...+++.|+.+|..|+...+-...+.+
14870 T Consensus 1216 ~~~~~~~~~~~~~~npe~~gtS~~m~rRAA~aL~~La~vp~NR~~F~~ 1263 (1295)
14871 T 6LTJ_L 1216 TQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTL 1263 (1295)
14872 T ss_dssp HHHCC--------------CCCSHHHHHHHHHHHHHHTTSSSHHHHTT
14873 T ss_pred HHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhcChhhHHHHHH
14874 Confidence 134567788899999887777776665
14875
14876
14877 No 348
14878 >6CRI_R Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
14879 Probab=86.18 E-value=0.043 Score=55.49 Aligned_cols=139 Identities=17% Similarity=0.118 Sum_probs=92.2 Template_Neff=12.500
14880
14881 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14882 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14883 .+..++..+. +.+..++..++.+|..+....+. . ...+++.+...+.+.++.++..++.+|..+.....
14884 T Consensus 63 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 131 (585)
14885 T 6CRI_R 63 GQLECLKLIA-SQKFTDKRIGYLGAMLLLDERQD--------V--HLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEM 131 (585)
14886 T ss_pred HHHHHHHHHh-CCCchHHHHHHHHHHHhCCCChH--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCHHH
14887 Confidence 3455666776 46777888888888887754221 1 12345666777777778888888888887764311
14888
14889
14890 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
14891 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
14892 ...+++.+...+.+ .++.++..++.+|..+....+... ...++.+...+.+. ++.++..++.+
14893 T Consensus 132 -----~~~~~~~l~~~l~~------~~~~vr~~a~~~L~~~~~~~~~~~-----~~~~~~l~~~l~~~-~~~vr~~a~~~ 194 (585)
14894 T 6CRI_R 132 -----CRDLAGEVEKLLKT------SNSYLRKKAALCAVHVIRKVPELM-----EMFLPATKNLLNEK-NHGVLHTSVVL 194 (585)
14895 T ss_pred -----HHHHHHHHHHHHhC------CChHHHHHHHHHHHHHHHHCHHHH-----HHHHHHHHHHHcCC-CHHHHHHHHHH
14896 Confidence 11345556666665 367888899999998876432221 24566777777665 77888888888
14897
14898
14899 Q NP_000290.2 708 LSDMWSS 714 (747)
14900 Q Consensus 708 LsnL~~~ 714 (747)
14901 |..+...
14902 T Consensus 195 l~~l~~~ 201 (585)
14903 T 6CRI_R 195 LTEMCER 201 (585)
14904 T ss_pred HHHHHHh
14905 Confidence 8887643
14906
14907
14908 No 349
14909 >5DFZ_B Vacuolar protein sorting-associated protein 38; Vps34, Vps15, Vps30, Vps38, Autophagy; 4.4A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
14910 Probab=85.86 E-value=0.051 Score=64.44 Aligned_cols=292 Identities=12% Similarity=0.004 Sum_probs=157.7 Template_Neff=9.900
14911
14912 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQ-AIGAYYIQHTCFQDESA--KQQVYQLGGICKLVDLL---RSPNQNVQQAAAGALRNLVFRS 318 (747)
14913 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr-~sAL~aLsnLs~~~~~~--~~~li~~~IL~~Ll~lL---~s~d~eVr~~AL~aLs~La~~~ 318 (747)
14914 .+++.|+..+.+.+..++ ..++..|..+....... ........+++.|+.++ .+.++.++..+..+|..+....
14915 T Consensus 464 ~~i~~L~~~l~d~~~~vR~~~a~~~L~~l~~~~~~~~~~~~~~~~~~lp~Li~~L~~~~d~~~~vr~~aa~~l~~~~~~~ 543 (1460)
14916 T 5DFZ_B 464 RVVPYFVCCFEDSDQDVQALSLLTLIQVLTSVRKLNQLNENIFVDYLLPRLKRLLISNRQNTNYLRIVFANCLSDLAIII 543 (1460)
14917 T ss_pred cchHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCccCCccccCcCChHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHc
14918 Confidence 455667777777788889 89999998886543211 11223345678888888 7777888888888887774321
14919
14920
14921 Q NP_000290.2 319 TTN------------KLETRRQNGIREAVSL----LRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIP 382 (747)
14922 Q Consensus 319 ~~~------------~~~ll~~~IL~~Ll~l----L~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~ 382 (747)
14923 ... .........++.+..+ +. +.++.++..++.+|..+........ ....+++.|+.+|..+
14924 T Consensus 544 ~~~~l~~l~~~~~~~~~~~l~~~~~~~l~~ll~~~l~-d~~~~VR~~A~~aL~~l~~~~~~~~-~~~~~l~~Li~ll~d~ 621 (1460)
14925 T 5DFZ_B 544 NRFQEFTFAQHCNDNSSTKYSAKLIQSVEDLTVSFLT-DNDTYVKMALLQNILPLCKFFGRER-TNDIILSHLITYLNDK 621 (1460)
14926 T ss_pred CHHHHHHHHHhcccChhHHHHcChHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHhccccccc-cHHhHHHHHHHHhcCC
14927 Confidence 100 0001111223333333 33 4567889999999988876422111 1135666677766321
14928
14929
14930 Q NP_000290.2 383 FSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCV 462 (747)
14931 Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (747)
14932 +++|-.+|..+|.+--. .++ ....+ ..++..|...+.
14933 T Consensus 622 ----------------~~~VR~~a~~aL~~i~~------~~~---------------~~~~~---~~~i~~L~~~l~--- 658 (1460)
14934 T 5DFZ_B 622 ----------------DPALRVSLIQTISGISI------LLG---------------TVTLE---QYILPLLIQTIT--- 658 (1460)
14935 T ss_pred ----------------CHHHHHHHHHHHHHHHh------hcC---------------chhhc---hhHHHHHHHHhc---
14936 Confidence 35555566666543110 000 00000 011222222111
14937
14938
14939 Q NP_000290.2 463 AASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGW 542 (747)
14940 Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~ 542 (747)
14941 |.. .+| | .+|-.+. +.+.. ..+.. .
14942 T Consensus 659 ------d~~----------------~~v--R-----~~a~~aL------~~~~~-----------------~~~~~--~- 683 (1460)
14943 T 5DFZ_B 659 ------DSE----------------ELV--V-----ISVLQSL------KSLFK-----------------TGLIR--K- 683 (1460)
14944 T ss_pred ------CCC----------------HHH--H-----HHHHHHH------HHhcC-----------------Ccchh--h-
14945 Confidence 110 000 0 0111111 00000 00000 0
14946
14947
14948 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNM 622 (747)
14949 Q Consensus 543 lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnL 622 (747)
14950 ....++++.|..++. +.++.++..|+.+|..+...... . . ....+++.|+.+|.++++.++..|+.+|..+
14951 T Consensus 684 ~~~~~~i~~l~~~l~-d~~~~VR~~A~~al~~l~~~~~~------~-~-~~~~~l~~L~~~l~d~~~~vr~~a~~aL~~~ 754 (1460)
14952 T 5DFZ_B 684 KYYIDISKTTSPLLL-HPNNWIRQFTLMIIIEIINKLSK------A-E-VYCILYPIIRPFFEFDVEFNFKSMISCCKQP 754 (1460)
14953 T ss_pred cccchhHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhCC------H-H-HHHHHHHHHHHHhcCCCHHHHHHHHHHhCCC
14954 Confidence 001246778888888 57889999999999988764221 1 1 1246788899999999999999999999998
14955
14956
14957 Q NP_000290.2 623 SRHPLLH----RVMGNQVFPEVTRLLT 645 (747)
14958 Q Consensus 623 a~~~e~~----~ll~~giI~~Ll~LL~ 645 (747)
14959 ....... ..+..+.+..+..++.
14960 T Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1460)
14961 T 5DFZ_B 755 VSRSVYNLLCSWSVRASKSLFWKKIIT 781 (1460)
14962 T ss_pred CCHHHHHHHHHHHHHhchhHHHHHHHH
14963 Confidence 7763331 2244455555555554
14964
14965
14966 No 350
14967 >2QNA_A Importin subunit beta-1, Snurportin-1; Nuclear transport, import of spliceosomal; HET: SO4; 2.84A {Homo sapiens}
14968 Probab=85.76 E-value=0.046 Score=56.33 Aligned_cols=154 Identities=11% Similarity=0.064 Sum_probs=95.8 Template_Neff=13.200
14969
14970 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQS--GNSDVVRSGASLLSNMS 623 (747)
14971 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s--~d~eVr~~AL~aLsnLa 623 (747)
14972 .++.|+..+. +.+ ..++..++.+|..++...+. . .... ....+++.+...+.+ .++.++..++.+|..++
14973 T Consensus 4 l~~~l~~~l~-~~~~~~~~~~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~l~ 77 (762)
14974 T 2QNA_A 4 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 77 (762)
14975 T ss_pred hHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHhCCH---h-hcHH-HHHhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
14976 Confidence 4566777776 344 67888899999888764221 0 0111 113456677777764 35788999999999988
14977
14978
14979 Q NP_000290.2 624 RHP-LL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
14980 Q Consensus 624 ~~~-e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
14981 ... .. . ......+++.+...+.+ .++.++..++.+|..++..............+++.+...+.+. ++.+
14982 T Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~v 150 (762)
14983 T 2QNA_A 78 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 150 (762)
14984 T ss_pred hcCCccCCcchhHHhHHHHHHHHhCC------CCHHHHHHHHHHHHHHHHhCchhhHHhhHHhHHHHHHHHcCCC-CHHH
14985 Confidence 652 11 1 01122345555566654 3678888999999988764332222222223566666677655 7788
14986
14987
14988 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
14989 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
14990 +..++.++..+...
14991 T Consensus 151 ~~~a~~~l~~l~~~ 164 (762)
14992 T 2QNA_A 151 ALQGIEFWSNVCDE 164 (762)
14993 T ss_pred HHHHHHHHHHHHhc
14994 Confidence 88888888887754
14995
14996
14997 No 351
14998 >3WOZ_C CLIP-associating protein 2; HEAT Repeat, Microtubule binding, Tubulin; HET: MSE; 2.2A {Mus musculus}
14999 Probab=85.74 E-value=0.049 Score=48.60 Aligned_cols=154 Identities=11% Similarity=0.036 Sum_probs=91.0 Template_Neff=11.700
15000
15001 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
15002 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
15003 ..++.++..+. +.++..|..++..|..++..... . .... -..++..+...+.+.+..++..++.++..++..
15004 T Consensus 5 ~~~~~~~~~l~-~~~w~~R~~al~~l~~~~~~~~~---~-~~~~--~~~i~~~l~~~l~d~~~~v~~~al~~l~~l~~~~ 77 (232)
15005 T 3WOZ_C 5 EDVAEVLNRCA-SSNWSERKEGLLGLQNLLKNQRT---L-SRIE--LKRLCEIFTRMFADPHGKVFSMFLETLVDFIQVH 77 (232)
15006 T ss_dssp CCHHHHHHHHT-CSSHHHHHHHHHHHHHHHHTTCC---C-CHHH--HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHH
15007 T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHHHhcCcc---c-CHHH--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHc
15008 Confidence 45666777777 47888899999999888864221 0 0111 135666777777777888999999999988865
15009
15010
15011 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15012 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15013 ..........+++.++..+.+. ....++..+..+|..+....+. ..++ ..+++.+...+.+. ++.++..++
15014 T Consensus 78 ~~~~~~~~~~ll~~ll~~l~d~-----~~~~vr~~a~~~l~~i~~~~~~--~~~~-~~l~~~l~~~~~~~-~~~~r~~~l 148 (232)
15015 T 3WOZ_C 78 KDDLQDWLFVLLTQLLKKMGAD-----LLGSVQAKVQKALDITRESFPN--DLQF-NILMRFTVDQTQTP-SLKVKVAIL 148 (232)
15016 T ss_dssp GGGCTTTHHHHHHHHHHHTTTT-----CCHHHHHHHHHHHHHHHHHSCH--HHHH-HHHHHHHTCTTCCC-CHHHHHHHH
15017 T ss_pred hHHHHHHHHHHHHHHHHHhccc-----cCHHHHHHHHHHHHHHHHHCCc--chHH-HHHHHHhhccccCC-CHHHHHHHH
15018 Confidence 2111111123555566555441 1456788888888887543211 1111 12233333344433 567777777
15019
15020
15021 Q NP_000290.2 706 LLLSDMWSSKE 716 (747)
15022 Q Consensus 706 ~aLsnL~~~~~ 716 (747)
15023 .++..++...+
15024 T Consensus 149 ~~l~~l~~~~~ 159 (232)
15025 T 3WOZ_C 149 KYIETLAKQMD 159 (232)
15026 T ss_dssp HHHHHHHTTSC
15027 T ss_pred HHHHHHHHhcC
15028 Confidence 77777665533
15029
15030
15031 No 352
15032 >3WOZ_D CLIP-associating protein 2; HEAT Repeat, Microtubule binding, Tubulin; HET: MSE; 2.2A {Mus musculus}
15033 Probab=85.74 E-value=0.049 Score=48.60 Aligned_cols=154 Identities=11% Similarity=0.036 Sum_probs=91.0 Template_Neff=11.700
15034
15035 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
15036 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
15037 ..++.++..+. +.++..|..++..|..++..... . .... -..++..+...+.+.+..++..++.++..++..
15038 T Consensus 5 ~~~~~~~~~l~-~~~w~~R~~al~~l~~~~~~~~~---~-~~~~--~~~i~~~l~~~l~d~~~~v~~~al~~l~~l~~~~ 77 (232)
15039 T 3WOZ_D 5 EDVAEVLNRCA-SSNWSERKEGLLGLQNLLKNQRT---L-SRIE--LKRLCEIFTRMFADPHGKVFSMFLETLVDFIQVH 77 (232)
15040 T ss_dssp CCHHHHHHHHH-CSCHHHHHHHHHHHHHHHHTTCC---C-CHHH--HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHH
15041 T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHHHhcCcc---c-CHHH--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHc
15042 Confidence 45666777777 47888899999999888864221 0 0111 135666777777777888999999999988865
15043
15044
15045 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15046 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15047 ..........+++.++..+.+. ....++..+..+|..+....+. ..++ ..+++.+...+.+. ++.++..++
15048 T Consensus 78 ~~~~~~~~~~ll~~ll~~l~d~-----~~~~vr~~a~~~l~~i~~~~~~--~~~~-~~l~~~l~~~~~~~-~~~~r~~~l 148 (232)
15049 T 3WOZ_D 78 KDDLQDWLFVLLTQLLKKMGAD-----LLGSVQAKVQKALDITRESFPN--DLQF-NILMRFTVDQTQTP-SLKVKVAIL 148 (232)
15050 T ss_dssp GGGCGGGHHHHHHHHHHHTTSC-----CCHHHHHHHHHHHHHHHHHSCH--HHHH-HHHHHHHTCSSCCC-CHHHHHHHH
15051 T ss_pred hHHHHHHHHHHHHHHHHHhccc-----cCHHHHHHHHHHHHHHHHHCCc--chHH-HHHHHHhhccccCC-CHHHHHHHH
15052 Confidence 2111111123555566555441 1456788888888887543211 1111 12233333344433 567777777
15053
15054
15055 Q NP_000290.2 706 LLLSDMWSSKE 716 (747)
15056 Q Consensus 706 ~aLsnL~~~~~ 716 (747)
15057 .++..++...+
15058 T Consensus 149 ~~l~~l~~~~~ 159 (232)
15059 T 3WOZ_D 149 KYIETLAKQMD 159 (232)
15060 T ss_dssp HHHHHHHTTCC
15061 T ss_pred HHHHHHHHhcC
15062 Confidence 77777665533
15063
15064
15065 No 353
15066 >5DCQ_C artificial repeat proteins (alphaREP3), Fibronectin-binding; adhesin, artificial repeat proteins, complex; HET: FMT; 1.83A {synthetic construct}
15067 Probab=85.49 E-value=0.051 Score=45.36 Aligned_cols=47 Identities=15% Similarity=0.166 Sum_probs=25.2 Template_Neff=12.100
15068
15069 Q NP_000290.2 654 SEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
15070 Q Consensus 654 d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
15071 ++.++..++.+|..+... ..++.+..++.+. +..++..++.++..+.
15072 T Consensus 120 ~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~ 166 (170)
15073 T 5DCQ_C 120 DSDVRRTAAYALGEIGGE-----------RVRAAMEKLAETG-TGFARKVAVNYLETHK 166 (170)
15074 T ss_dssp SHHHHHHHHHHHHHHCHH-----------HHHHHHHHHHHHC-CHHHHHHHHHHHHTC-
15075 T ss_pred CHHHHHHHHHHHHHhchH-----------HHHHHHHHHHHcC-ChHHHHHHHHHHHhcc
15076 Confidence 455666666666555431 1344444555544 5566666766666543
15077
15078
15079 No 354
15080 >4L7M_A Putative uncharacterized protein; HEAT-repeats, Hypothetical, UNKNOWN FUNCTION; HET: MSE, GOL; 2.002A {Thermococcus onnurineus}
15081 Probab=85.26 E-value=0.051 Score=48.13 Aligned_cols=143 Identities=17% Similarity=0.105 Sum_probs=85.7 Template_Neff=12.800
15082
15083 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
15084 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
15085 .++.+...+. +.++.++..++.++..+... . .....++.+..++.+.++.++..++.++..++....
15086 T Consensus 120 ~~~~l~~~l~-~~~~~~~~~a~~~l~~~~~~--~----------~~~~~~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~~ 186 (269)
15087 T 4L7M_A 120 AAKTLVSLLE-SPDDMMRIETIDVLSKLQPL--E----------DSKLVRTYINELVVSPDLYTKVAGFCLFLNMLNSSA 186 (269)
15088 T ss_dssp HHHHHHHHTT-SCCHHHHHHHHHHHTTCCBS--C----------CCHHHHHHHHHHHHCSSHHHHHHHHHHHHHHGGGCS
15089 T ss_pred HHHHHHHHcC-CCCHHHHHHHHHHHHhcCCh--h----------HhhchHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCC
15090 Confidence 4556666666 35666777777777665321 0 123566777777877778889999999998875311
15091
15092
15093 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCRS--SASPKAAEAA 704 (747)
15094 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~s--~~d~eVr~aA 704 (747)
15095 ..... ..+++.+...+.+ .++.++..++.+|..+..... ....... +.+..++..+.+ . ++.++..+
15096 T Consensus 187 ~~~~~-~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~--~~~~~l~~~l~~~~~-~~~vr~~a 256 (269)
15097 T 4L7M_A 187 DSGHL-TLILDEIPSLLQN------DNEFIVELALDVLEKALSFPLLENVKIEL--LKISRIVDGLVYREG-APIIRLKA 256 (269)
15098 T ss_dssp SCCCG-GGTTTTHHHHHTC------SCHHHHHHHHHHHHHHTTSCCCSCCHHHH--HHHHHHHHHHTTCSS-CHHHHHHH
15099 T ss_pred CcchH-HHHHHHHHHHHcC------CCHHHHHHHHHHHHHHcCCccHHHHHHHH--HHHHHHHhhccCCCC-CHHHHHHH
15100 Confidence 11111 1245556666665 367888899999988875411 1111111 233344444443 3 67788888
15101
15102
15103 Q NP_000290.2 705 RLLLSDMWS 713 (747)
15104 Q Consensus 705 L~aLsnL~~ 713 (747)
15105 +.+|..+..
15106 T Consensus 257 ~~~l~~l~~ 265 (269)
15107 T 4L7M_A 257 KKVSDLIDS 265 (269)
15108 T ss_dssp HHHHHHHHH
15109 T ss_pred HHHHHHHHH
15110 Confidence 888877653
15111
15112
15113 No 355
15114 >4P6Z_B BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
15115 Probab=85.10 E-value=0.053 Score=54.64 Aligned_cols=109 Identities=13% Similarity=0.033 Sum_probs=65.8 Template_Neff=12.700
15116
15117 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
15118 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
15119 .+++.+...+.+.++.++..++.++..+....+..........+++.+...+.+.+..++..++.++..+.......
15120 T Consensus 176 ~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~--- 252 (600)
15121 T 4P6Z_B 176 GFLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYMPKDDRE--- 252 (600)
15122 T ss_pred ChHHHHHHHhcCCCHHHHHHHHHHHHHHHhhCCCcchhccCHHHHHHHHHHhhcCCHHHHHHHHHHHHHhCCCCHHH---
15123 Confidence 35566666676777788888888888887643321111112245555666666556667777777777766432211
15124
15125
15126 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
15127 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
15128 ...++..+...+. +.++.++..++.++..+..
15129 T Consensus 253 --~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~ 284 (600)
15130 T 4P6Z_B 253 --AQSICERVTPRLS-HANSAVVLSAVKVLMKFME 284 (600)
15131 T ss_pred --HHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHH
15132 Confidence 1234555555565 4566777788888777765
15133
15134
15135 No 356
15136 >5MU7_A Coatomer subunit beta, Coatomer subunit; coatomer, COPI, beta COP, delta; 2.57A {Chaetomium thermophilum var. thermophilum DSM 1495}
15137 Probab=85.09 E-value=0.053 Score=50.69 Aligned_cols=101 Identities=9% Similarity=0.074 Sum_probs=54.4 Template_Neff=12.800
15138
15139 Q NP_000290.2 598 PQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK 677 (747)
15140 Q Consensus 598 ~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~ 677 (747)
15141 +.+...+.+.++.++..++.+|..+...... ....+++.+...+.+ .+..++..++.+|..+... ..
15142 T Consensus 191 ~~l~~~l~~~~~~~~~~a~~~l~~~~~~~~~---~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~-~~--- 257 (373)
15143 T 5MU7_A 191 GTVFEGIPNAEELLQLVEIEFIRKDALHNPQ---NKPRYLRLIFDLLEA------NTSTVVYEAASSLTALTNN-PV--- 257 (373)
15144 T ss_dssp HHTGGGGGGSCHHHHHHHHHHHHHHHHHCGG---GHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHCCC-HH---
15145 T ss_pred HHHHhcCCChhHHHHHHHHHHHHHHhccCcc---cHHHHHHHHHHHHhc------CCHHHHHHHHHHHHHcCCC-HH---
15146 Confidence 3344444444444444455444444332100 012344555555544 2556677777777776542 11
15147
15148
15149 Q NP_000290.2 678 QYFSSSMLNNIINLCR-SSASPKAAEAARLLLSDMWSS 714 (747)
15150 Q Consensus 678 ~Lve~giL~~Ll~LL~-s~~d~eVr~aAL~aLsnL~~~ 714 (747)
15151 .. ...++.+...+. +. ++.++..++.+|..+...
15152 T Consensus 258 -~~-~~~~~~l~~~l~~~~-~~~vr~~a~~~l~~l~~~ 292 (373)
15153 T 5MU7_A 258 -AV-KAAAGKFIELAIKEA-DNNVKLIVLDRVDQLRQK 292 (373)
15154 T ss_dssp -HH-HHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHH
15155 T ss_pred -HH-HHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHHh
15156 Confidence 11 135666777776 44 778888888888888865
15157
15158
15159 No 357
15160 >4UQI_B AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ENDOCYTOSIS, PROTEIN TRANSPORT, LIPID BINDING; HET: IHP; 2.79A {RATTUS NORVEGICUS}
15161 Probab=84.97 E-value=0.056 Score=55.88 Aligned_cols=142 Identities=13% Similarity=0.105 Sum_probs=95.5 Template_Neff=12.200
15162
15163 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
15164 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
15165 .++.++..+. ++++.++..++.++..+....+. . ...+++.+...+.+.++.++..++.+++.+.....
15166 T Consensus 50 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 118 (657)
15167 T 4UQI_B 50 LFPDVVNCMQ-TDNLELKKLVYLYLMNYAKSQPD--------M--AIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKI 118 (657)
15168 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCHh--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHhhcCCchh
15169 Confidence 4555666676 46677888888888887764221 1 13456667777777788889999999988864311
15170
15171
15172 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
15173 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
15174 ...+++.+...+.+ .++.++..++.+|..+....+.. +....+++.+..++.+. ++.++..++.+
15175 T Consensus 119 -----~~~l~~~l~~~l~~------~~~~vr~~a~~~L~~l~~~~~~~---~~~~~~~~~l~~~l~d~-~~~vr~~a~~~ 183 (657)
15176 T 4UQI_B 119 -----TEYLCEPLRKCLKD------EDPYVRKTAAVCVAKLHDINAQM---VEDQGFLDSLRDLIADS-NPMVVANAVAA 183 (657)
15177 T ss_pred -----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCHHH---hcCcchHHHHHHHhcCC-CHHHHHHHHHH
15178 Confidence 12345556666655 36788899999999887643221 12234567777777766 77889999999
15179
15180
15181 Q NP_000290.2 708 LSDMWSSK 715 (747)
15182 Q Consensus 708 LsnL~~~~ 715 (747)
15183 |..+....
15184 T Consensus 184 l~~l~~~~ 191 (657)
15185 T 4UQI_B 184 LSEISESH 191 (657)
15186 T ss_pred HHHHHhcC
15187 Confidence 88887654
15188
15189
15190 No 358
15191 >6MZE_Z Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: MG, GTP, GDP; 3.6A {Sus scrofa}
15192 Probab=84.94 E-value=0.055 Score=53.37 Aligned_cols=149 Identities=8% Similarity=0.061 Sum_probs=96.3 Template_Neff=12.900
15193
15194 Q NP_000290.2 548 AIRTYLNLM-GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
15195 Q Consensus 548 ~I~~LL~LL-~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
15196 +++.+...+ . +.++.++..++.++..++..... . .... ....+++.+...+.+.+..++..++.+|..++...
15197 T Consensus 340 ~~~~l~~~l~~-d~~~~v~~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~ 413 (536)
15198 T 6MZE_Z 340 YLRVLANVIQK-DANVQAVTIAANSVQLLCNSLRS---N-FTRS-YGAIVLVPLLERTKEKKPSVNEAICSALDAVATYC 413 (536)
15199 T ss_dssp THHHHHHHHHH-CSCHHHHHHHHHHHHHHHHHTTT---C-CSSH-HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTT
15200 T ss_pred HHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHccc---c-ccHH-HHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHhc
15201 Confidence 556666776 5 46778888999999988764221 0 0101 12356677777777777788888988888887542
15202
15203
15204 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA-------KQYFSSSMLNNIINLCRSSASPK 699 (747)
15205 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~-------~~Lve~giL~~Ll~LL~s~~d~e 699 (747)
15206 .. ..+++.+...+.+ .++.++..++.+|..+........ ... ...+++.+...+.+. +..
15207 T Consensus 414 ~~-----~~~~~~l~~~l~~------~~~~vr~~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~i~~~l~~~l~~~-~~~ 480 (536)
15208 T 6MZE_Z 414 GF-----DDCLEETLNYMKH------KTPQVRIECTKFLTRMLQGWKSDGPLQNQLLFKL-LPEVTTAVLKIVNDT-QPT 480 (536)
15209 T ss_dssp TT-----SSHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHTCCCCSSSCCHHHHTC-CCCCCHHHHHHHTCS-SHH
15210 T ss_pred CH-----HHHHHHHHHHHcc------CCHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHH-HHHHHHHHHHHHcCC-CHH
15211 Confidence 11 1244555555554 367788889999888876432210 011 123566677777765 778
15212
15213
15214 Q NP_000290.2 700 AAEAARLLLSDMWSSK 715 (747)
15215 Q Consensus 700 Vr~aAL~aLsnL~~~~ 715 (747)
15216 ++..++.++..+....
15217 T Consensus 481 vr~~a~~~l~~l~~~~ 496 (536)
15218 T 6MZE_Z 481 TRNTGFECFATLMKLV 496 (536)
15219 T ss_dssp HHHHHHHHHHHHHHHH
15220 T ss_pred HHHHHHHHHHHHHHHH
15221 Confidence 9999999999888654
15222
15223
15224 No 359
15225 >4MFU_A Beta-catenin-like protein 1; ARM repeats, GENE REGULATION; 2.744A {Homo sapiens}
15226 Probab=84.81 E-value=0.067 Score=56.37 Aligned_cols=117 Identities=12% Similarity=0.116 Sum_probs=82.7 Template_Neff=8.700
15227
15228 Q NP_000290.2 610 DVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP---------QLAKQY 679 (747)
15229 Q Consensus 610 eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~---------e~~~~L 679 (747)
15230 .....++.+|.+|+..+.. ..++..++++.|+.+|.+ .+..+...++.+|.+|+.... .....+
15231 T Consensus 42 ~~L~~ai~~L~~La~~p~~~~~lv~~g~i~~Lv~LL~~------~n~~i~~~a~~~L~~Lt~~~~~~~~~~~~~~~~~~l 115 (490)
15232 T 4MFU_A 42 LDLNDIIQEMHVVATMPDLYHLLVELNAVQSLLGLLGH------DNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDAL 115 (490)
15233 T ss_dssp HHHHHHHHHHHTTTTSCCCTHHHHHTTHHHHHHHHTSC------SSHHHHHHHHHHHHHHHHGGGSSCCCHHHHHHHHHH
15234 T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHCChHHHHHHHhCC------CCHHHHHHHHHHHHHHcCcccccCChhhHHHHHHHH
15235 Confidence 3445678888888876544 455667889999999976 356788899999999987532 235566
15236
15237
15238 Q NP_000290.2 680 FSSSMLNNIINLCRS------SASPKAAEAARLLLSDMWSSK-ELQGVLRQQGFDRNMLGT 733 (747)
15239 Q Consensus 680 ve~giL~~Ll~LL~s------~~d~eVr~aAL~aLsnL~~~~-~~~~~~~~~~~~~~~~~~ 733 (747)
15240 .+.++++.|+.+|.. . +...+..++.+|.+|+... +....+.+.|+-..++..
15241 T Consensus 116 ~~~g~l~~Lv~~L~~~~e~~~~-d~~~~~~al~~L~nL~~~~~~~~~~i~~~~~l~~Ll~~ 175 (490)
15242 T 4MFU_A 116 VDGQVVALLVQNLERLDESVKE-EADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKR 175 (490)
15243 T ss_dssp HHTTHHHHHHHHHHHCCTTCHH-HHHHHHHHHHHHHHHHHHSTTHHHHHCCCCCHHHHHHH
15244 T ss_pred HhCCHHHHHHHHHHhccccccc-hHHHHHHHHHHHHHHhccCHHHHHHHHHCCHHHHHHHH
15245 Confidence 677888889888875 3 5677889999999998754 444445555554444433
15246
15247
15248 No 360
15249 >5N3U_B Phycocyanobilin lyase subunit alpha (E.C.4.-.-.-); phycobilisome, chromophorylation, phycocyanin, lyase; 1.89A {Nostoc sp. PCC 7120}
15250 Probab=84.57 E-value=0.06 Score=46.12 Aligned_cols=135 Identities=14% Similarity=0.143 Sum_probs=82.4 Template_Neff=12.400
15251
15252 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
15253 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
15254 +.++.|...+. +.++.++..++.+|..+.. ..++.+...+.+.++.++..++.+|..+...
15255 T Consensus 32 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~-----------------~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~- 92 (208)
15256 T 5N3U_B 32 AAIPTLIAVFG-YNNPTAAAIASTALVQLGE-----------------VAVPQLLTQIDDYNYGARAYSIRTLAAIADP- 92 (208)
15257 T ss_dssp GGHHHHHHHTT-SCCHHHHHHHHHHHHHHGG-----------------GGHHHHHHCCCTTCHHHHHHHHHHHHHHCCG-
15258 T ss_pred hhHHHHHHHhC-CCCHHHHHHHHHHHHHhCc-----------------chHHHHHHHhhCCCHHHHHHHHHHHHHhcCc-
15259 Confidence 45666777776 3566677777776655432 1334455666667778888888888776522
15260
15261
15262 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA-KQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15263 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~-~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15264 ..++.+...+... .++.++..++.+|..+........ ........++.+..++.+. ++.++..++
15265 T Consensus 93 --------~~~~~l~~~l~~~-----~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a~ 158 (208)
15266 T 5N3U_B 93 --------RALDVLIDAAATD-----FAPSVRRAAAKGLGNLHWHKLEFPDNQTAPKKALETLLFISQDA-EWSIRYAAI 158 (208)
15267 T ss_dssp --------GGHHHHHHHHHHC-----CCHHHHHHHHHHHTTSCGGGSCTTHHHHHHHHHHHHHHHHTTCS-SHHHHHHHH
15268 T ss_pred --------chHHHHHHHHccC-----CCHHHHHHHHHHHHhhhccCCCCCCCccCChHHHHHHHHHhcCC-CHHHHHHHH
15269 Confidence 2344555555431 256788888888888864221111 1111123566666777665 677888888
15270
15271
15272 Q NP_000290.2 706 LLLSDMWSS 714 (747)
15273 Q Consensus 706 ~aLsnL~~~ 714 (747)
15274 .+|..+...
15275 T Consensus 159 ~~l~~~~~~ 167 (208)
15276 T 5N3U_B 159 VGLQGLVNI 167 (208)
15277 T ss_dssp HHHHHGGGC
15278 T ss_pred HHHHHHcCC
15279 Confidence 888887764
15280
15281
15282 No 361
15283 >6QH5_B AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
15284 Probab=84.43 E-value=0.06 Score=53.82 Aligned_cols=145 Identities=12% Similarity=0.031 Sum_probs=94.1 Template_Neff=12.900
15285
15286 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
15287 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
15288 .++.+...+. +.++.++..++.+|..+....+. ......+++.+...+.+.++.++..++.+|..+.....
15289 T Consensus 122 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~--------~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~ 192 (592)
15290 T 6QH5_B 122 LCEPLRKCLK-DEDPYVRKTAAVCVAKLHDINAQ--------MVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHP 192 (592)
15291 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCch--------hhcCccHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC
15292 Confidence 4566667776 46788889999999988764221 11224677788888888888899999999998886521
15293
15294
15295 Q NP_000290.2 628 --LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15296 Q Consensus 628 --~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15297 ........+++.+...+.+ .++.++..++.+|..+....+.. ....++.+...+.+. ++.++..++
15298 T Consensus 193 ~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~l~~~l~~~-~~~vr~~a~ 260 (592)
15299 T 6QH5_B 193 NSNLLDLNPQNINKLLTALNE------CTEWGQIFILDCLSNYNPKDDRE-----AQSICERVTPRLSHA-NSAVVLSAV 260 (592)
15300 T ss_pred hhhhHhHHhhHHHHHHHHhcC------CCHHHHHHHHHHHHHHhcCCHHH-----HHHHHHHHHHHhcCC-CHHHHHHHH
15301 Confidence 1111122355566666654 25677778888888877542221 112455555666655 677888888
15302
15303
15304 Q NP_000290.2 706 LLLSDMWS 713 (747)
15305 Q Consensus 706 ~aLsnL~~ 713 (747)
15306 .++..+..
15307 T Consensus 261 ~~l~~l~~ 268 (592)
15308 T 6QH5_B 261 KVLMKFLE 268 (592)
15309 T ss_pred HHHHHHHh
15310 Confidence 88877763
15311
15312
15313 No 362
15314 >2DB0_A 253aa long hypothetical protein; HEAT repeats, helical structure, Structural; 2.2A {Pyrococcus horikoshii}
15315 Probab=84.35 E-value=0.062 Score=47.21 Aligned_cols=104 Identities=10% Similarity=0.179 Sum_probs=59.0 Template_Neff=12.700
15316
15317 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRH 625 (747)
15318 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~ 625 (747)
15319 ..++.|+..+. +.++.++..++.+|..+...... . ...+++.+...+.+. ++.++..++.+|..+...
15320 T Consensus 32 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~~~~~ 100 (253)
15321 T 2DB0_A 32 SVLKKLIELLD-DDLWTVVKNAISIIMVIAKTRED--------L--YEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKE 100 (253)
15322 T ss_dssp HHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCGG--------G--HHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHH
15323 T ss_pred HHHHHHHHHcc-CCCHHHHHHHHHHHHHHHhhCHH--------H--HHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHh
15324 Confidence 45666777776 46677888888888777643110 0 122445566666666 677888888888777643
15325
15326
15327 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
15328 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
15329 ... .+ ...++.+...+.+ .++.++..++.++..+..
15330 T Consensus 101 ~~~--~~-~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~ 136 (253)
15331 T 2DB0_A 101 KPE--LV-KSMIPVLFANYRI------GDEKTKINVSYALEEIAK 136 (253)
15332 T ss_dssp CHH--HH-HHHHHHHHHHSCC------CSHHHHHHHHHHHHHHHH
15333 T ss_pred CHH--HH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
15334 Confidence 110 00 1133444444444 245556666666665544
15335
15336
15337 No 363
15338 >2DB0_B 253aa long hypothetical protein; HEAT repeats, helical structure, Structural; 2.2A {Pyrococcus horikoshii}
15339 Probab=84.35 E-value=0.062 Score=47.21 Aligned_cols=104 Identities=10% Similarity=0.179 Sum_probs=59.0 Template_Neff=12.700
15340
15341 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRH 625 (747)
15342 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~ 625 (747)
15343 ..++.|+..+. +.++.++..++.+|..+...... . ...+++.+...+.+. ++.++..++.+|..+...
15344 T Consensus 32 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~~~~~ 100 (253)
15345 T 2DB0_B 32 SVLKKLIELLD-DDLWTVVKNAISIIMVIAKTRED--------L--YEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKE 100 (253)
15346 T ss_dssp HHHHHHHHHTT-CSSHHHHHHHHHHHHHHGGGCGG--------G--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
15347 T ss_pred HHHHHHHHHcc-CCCHHHHHHHHHHHHHHHhhCHH--------H--HHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHh
15348 Confidence 45666777776 46677888888888777643110 0 122445566666666 677888888888777643
15349
15350
15351 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
15352 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
15353 ... .+ ...++.+...+.+ .++.++..++.++..+..
15354 T Consensus 101 ~~~--~~-~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~ 136 (253)
15355 T 2DB0_B 101 KPE--LV-KSMIPVLFANYRI------GDEKTKINVSYALEEIAK 136 (253)
15356 T ss_dssp CHH--HH-HHHHHHHTTTCCC------CSHHHHHHHHHHHHHHHH
15357 T ss_pred CHH--HH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
15358 Confidence 110 00 1133444444444 245556666666665544
15359
15360
15361 No 364
15362 >2JKT_A AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ALTERNATIVE SPLICING, PHOSPHOPROTEIN, PHOSPHORYLATION, PROTEIN; HET: SEP, SO4; 3.4A {MUS MUSCULUS}
15363 Probab=84.21 E-value=0.064 Score=54.84 Aligned_cols=140 Identities=15% Similarity=0.148 Sum_probs=93.7 Template_Neff=12.300
15364
15365 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
15366 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
15367 .++.++.++. ++++.++..++.++..+...... . ...+++.+...+.+.++.++..++.+|..+.....
15368 T Consensus 75 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~~ 143 (623)
15369 T 2JKT_A 75 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE--------L--IRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 143 (623)
15370 T ss_dssp CHHHHHHHTT-CSCHHHHHHHHHHHHHSCCCCHH--------H--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCHHH
15371 T ss_pred HHHHHHHHHc-CCCccHHHHHHHHHHHhcCCCHH--------H--HHHHHHHHHHHHhCCCHHHHHHHHHHHHhhCCHHH
15372 Confidence 4566777777 46778888888888887653221 1 12355667777777788899999999988764311
15373
15374
15375 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15376 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15377 ...+++.+...+ .+ .++.++..++.+|..+....+.. +.....++.+..++.+. ++.++..++
15378 T Consensus 144 -----~~~l~~~l~~~l~~~~------~~~~vr~~a~~~L~~~~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~ 208 (623)
15379 T 2JKT_A 144 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLLNDQ-HLGVVTAAT 208 (623)
15380 T ss_dssp -----HHHHTTHHHHHHHCTT------SCHHHHHHHHHHHHHHHHHCTTT---CCCCTHHHHHHGGGGCS-SHHHHHHHH
15381 T ss_pred -----HHHHHHhHHHHHHcCC------CCHHHHHHHHHHHHHHHHHChhh---cCccchHHHHHHHhcCC-CHHHHHHHH
15382 Confidence 112445556666 44 36788999999999887642221 11234567777777766 778888888
15383
15384
15385 Q NP_000290.2 706 LLLSDMWS 713 (747)
15386 Q Consensus 706 ~aLsnL~~ 713 (747)
15387 .+|..+..
15388 T Consensus 209 ~~l~~l~~ 216 (623)
15389 T 2JKT_A 209 SLITTLAQ 216 (623)
15390 T ss_dssp HHHHHHHT
15391 T ss_pred HHHHHHHH
15392 Confidence 88888775
15393
15394
15395 No 365
15396 >3LTJ_A AlphaRep-4; protein engineering, HEAT-like repeat, PROTEIN; 1.8A {synthetic}
15397 Probab=84.11 E-value=0.065 Score=45.71 Aligned_cols=28 Identities=11% Similarity=0.126 Sum_probs=18.0 Template_Neff=12.300
15398
15399 Q NP_000290.2 685 LNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
15400 Q Consensus 685 L~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
15401 ++.+...+.+. +..++..++.++..+..
15402 T Consensus 140 ~~~l~~~l~~~-~~~v~~~a~~~l~~~~~ 167 (201)
15403 T 3LTJ_A 140 VEPLIKALKDE-DGWVRQSAADALGEIGG 167 (201)
15404 T ss_dssp HHHHHHHTTCS-SHHHHHHHHHHHHHHCS
15405 T ss_pred HHHHHHHHhCC-ChHHHHHHHHHHHHhCc
15406 Confidence 44455555544 56777778888777664
15407
15408
15409 No 366
15410 >4P6Z_B BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
15411 Probab=84.10 E-value=0.065 Score=53.98 Aligned_cols=145 Identities=12% Similarity=0.047 Sum_probs=94.3 Template_Neff=12.700
15412
15413 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
15414 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
15415 .++.+...+. +.++.++..++.+|..+....+. .+....+++.+...+.+.++.++..++.+|..+....
15416 T Consensus 138 ~~~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 208 (600)
15417 T 4P6Z_B 138 LCEPLRKCLK-DEDPYVRKTAAVCVAKLHDINAQ--------LVEDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHP 208 (600)
15418 T ss_pred HHHHHHHhcC-CCCHHHHHHHHHHHHHHHhhChH--------HhhccChHHHHHHHhcCCCHHHHHHHHHHHHHHHhhCC
15419 Confidence 4566677776 46778888999999988764321 1112457778888888888899999999999888652
15420
15421
15422 Q NP_000290.2 627 L-LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15423 Q Consensus 627 e-~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15424 . ........+++.+...+.+ .+..++..++.+|..+....+.. ....++.+...+.+. +..++..++
15425 T Consensus 209 ~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~l~~~l~~~-~~~vr~~a~ 276 (600)
15426 T 4P6Z_B 209 SSNLLDLNPQSINKLLTALNE------CTEWGQIFILDCLANYMPKDDRE-----AQSICERVTPRLSHA-NSAVVLSAV 276 (600)
15427 T ss_pred CcchhccCHHHHHHHHHHhhc------CCHHHHHHHHHHHHHhCCCCHHH-----HHHHHHHHHHHhcCC-CHHHHHHHH
15428 Confidence 1 1111122355556666654 25677778888888876542221 123455566666655 677788888
15429
15430
15431 Q NP_000290.2 706 LLLSDMWS 713 (747)
15432 Q Consensus 706 ~aLsnL~~ 713 (747)
15433 .++..+..
15434 T Consensus 277 ~~l~~l~~ 284 (600)
15435 T 4P6Z_B 277 KVLMKFME 284 (600)
15436 T ss_pred HHHHHHHH
15437 Confidence 88777764
15438
15439
15440 No 367
15441 >6QH7_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: SEP; 3.4A {Rattus norvegicus}
15442 Probab=84.02 E-value=0.067 Score=54.81 Aligned_cols=140 Identities=15% Similarity=0.148 Sum_probs=93.1 Template_Neff=12.200
15443
15444 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
15445 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
15446 .++.++.++. ++++.++..++.++..+...... . ...+++.+...+.+.++.++..++.+|..+.....
15447 T Consensus 75 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~~ 143 (621)
15448 T 6QH7_A 75 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE--------L--IRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 143 (621)
15449 T ss_dssp CHHHHHHHTT-CSSHHHHHHHHHHHHHSCCCCHH--------H--HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCHHH
15450 T ss_pred HHHHHHHHHc-CCCccHHHHHHHHHHHHcCCCHH--------H--HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCHHH
15451 Confidence 4556667776 46777888888888887754221 1 12345666677777788899999999988764311
15452
15453
15454 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15455 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15456 ...+++.+...+ .+ .++.++..++.+|..+....+.. +.....++.+..++.+. ++.++..++
15457 T Consensus 144 -----~~~l~~~l~~~l~~~~------~~~~vr~~a~~~L~~~~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~ 208 (621)
15458 T 6QH7_A 144 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLLNDQ-HLGVVTAAT 208 (621)
15459 T ss_dssp -----HHHHTTHHHHHHTTSC------CCHHHHHHHHHHHHHHHHHCGGG---CCCCTTHHHHHHGGGCS-SHHHHHHHH
15460 T ss_pred -----HHHHHhhHHHHHHcCC------CCHHHHHHHHHHHHHHHHHChhh---cCccchHHHHHHHhcCC-CHHHHHHHH
15461 Confidence 112445556666 44 36788999999999887643221 11234567777777765 778888888
15462
15463
15464 Q NP_000290.2 706 LLLSDMWS 713 (747)
15465 Q Consensus 706 ~aLsnL~~ 713 (747)
15466 .+|..+..
15467 T Consensus 209 ~~l~~l~~ 216 (621)
15468 T 6QH7_A 209 SLITTLAQ 216 (621)
15469 T ss_dssp HHHHHHHT
15470 T ss_pred HHHHHHHH
15471 Confidence 88888775
15472
15473
15474 No 368
15475 >6CRI_R Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
15476 Probab=83.93 E-value=0.067 Score=53.93 Aligned_cols=67 Identities=18% Similarity=0.165 Sum_probs=49.2 Template_Neff=12.500
15477
15478 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
15479 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
15480 +++.+...+. +.++.++..++.+|..+....+. . ...+++.|...+.+.++.++..++.+|..+...
15481 T Consensus 135 ~~~~l~~~l~-~~~~~vr~~a~~~L~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 201 (585)
15482 T 6CRI_R 135 LAGEVEKLLK-TSNSYLRKKAALCAVHVIRKVPE--------L--MEMFLPATKNLLNEKNHGVLHTSVVLLTEMCER 201 (585)
15483 T ss_pred HHHHHHHHHh-CCChHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHh
15484 Confidence 4566777777 46778888999999888764221 1 135677788888878888999999999888754
15485
15486
15487 No 369
15488 >4UQI_B AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ENDOCYTOSIS, PROTEIN TRANSPORT, LIPID BINDING; HET: IHP; 2.79A {RATTUS NORVEGICUS}
15489 Probab=83.87 E-value=0.069 Score=55.16 Aligned_cols=145 Identities=12% Similarity=0.031 Sum_probs=94.3 Template_Neff=12.200
15490
15491 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
15492 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
15493 .++.+...+. +.++.++..++.+|..+....+. .+....+++.+..++.+.++.++..++.+|..+.....
15494 T Consensus 122 l~~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~--------~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 192 (657)
15495 T 4UQI_B 122 LCEPLRKCLK-DEDPYVRKTAAVCVAKLHDINAQ--------MVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHP 192 (657)
15496 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCHH--------HhcCcchHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCC
15497 Confidence 4566667776 46778888999999988764321 11224677788888888888899999999999887521
15498
15499
15500 Q NP_000290.2 628 --LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15501 Q Consensus 628 --~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15502 ........+++.+...+.+ .++.++..++.+|..+....... ...+++.+...+.+. +..++..++
15503 T Consensus 193 ~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~L~~l~~~~~~~-----~~~~~~~l~~~l~~~-~~~vr~~a~ 260 (657)
15504 T 4UQI_B 193 NSNLLDLNPQNINKLLTALNE------CTEWGQIFILDCLSNYNPKDDRE-----AQSICERVTPRLSHA-NSAVVLSAV 260 (657)
15505 T ss_pred hhhhhhhhhcHHHHHHHHhcC------CCHHHHHHHHHHHHhhCCCCHHH-----HHHHHHHHHHHhcCC-CHHHHHHHH
15506 Confidence 1111123355666666655 35677888888888887542221 112455566666555 667777777
15507
15508
15509 Q NP_000290.2 706 LLLSDMWS 713 (747)
15510 Q Consensus 706 ~aLsnL~~ 713 (747)
15511 .++..+..
15512 T Consensus 261 ~~l~~l~~ 268 (657)
15513 T 4UQI_B 261 KVLMKFLE 268 (657)
15514 T ss_pred HHHHHHHh
15515 Confidence 77777663
15516
15517
15518 No 370
15519 >5XAH_A Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
15520 Probab=83.55 E-value=0.071 Score=50.49 Aligned_cols=142 Identities=14% Similarity=0.108 Sum_probs=83.6 Template_Neff=12.900
15521
15522 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHP-LLHRVMGNQVFP 638 (747)
15523 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~-e~~~ll~~giI~ 638 (747)
15524 ++.++..++.++..++..... . ....+ -..+++.+...+.+. +..++..++.++..++... .........+++
15525 T Consensus 163 ~~~v~~~a~~~l~~l~~~~~~---~-~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 237 (416)
15526 T 5XAH_A 163 DAMLLEHAGEAIPALAAAAGG---D-SFAPF-FAGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLP 237 (416)
15527 T ss_dssp HHHHHHHHHHHHHHHHHHHTS---T-TTHHH-HHHHHHHHHHTTSSSSCHHHHHHHHHHHHHHHHHHGGGGGGGHHHHHH
15528 T ss_pred HHHHHHHHHHHHHHHHHHhCc---c-chHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
15529 Confidence 455667778888777654210 0 01111 133556666666543 3567778888888877541 111111123566
15530
15531
15532 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR-SSASPKAAEAARLLLSDMWSSK 715 (747)
15533 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~-s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
15534 .+...+.+ .++.++..++.+|..++...+......+ ..+++.+...+. +. ++.++..++.++..++...
15535 T Consensus 238 ~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~~-~~~v~~~a~~~l~~l~~~~ 307 (416)
15536 T 5XAH_A 238 VLLSTAQE------ADPEVRSNAIFGMGVLAEHGGHPAQEHF-PKLLGLLFPLLARER-HDRVRDNICGALARLLMAS 307 (416)
15537 T ss_dssp HHHHHTSC------SSHHHHHHHHHHHHHHHHHHHHHHHTTH-HHHHHHHTTHHHHCC-CHHHHHHHHHHHHHHHHHC
15538 T ss_pred HHHHHhhc------CCHHHHHHHHHHHHHHHHhcCchHHhhH-HHHHHHHHHHhccCC-CHHHHHHHHHHHHHHHHhC
15539 Confidence 66666655 3678889999999998865332222222 235666777776 44 6778888888888877543
15540
15541
15542 No 371
15543 >5XAH_C Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
15544 Probab=83.55 E-value=0.071 Score=50.49 Aligned_cols=142 Identities=14% Similarity=0.108 Sum_probs=83.6 Template_Neff=12.900
15545
15546 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHP-LLHRVMGNQVFP 638 (747)
15547 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~-e~~~ll~~giI~ 638 (747)
15548 ++.++..++.++..++..... . ....+ -..+++.+...+.+. +..++..++.++..++... .........+++
15549 T Consensus 163 ~~~v~~~a~~~l~~l~~~~~~---~-~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 237 (416)
15550 T 5XAH_C 163 DAMLLEHAGEAIPALAAAAGG---D-SFAPF-FAGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLP 237 (416)
15551 T ss_dssp HHHHHHHHHTHHHHHHHHHTS---T-TTHHH-HHHHHHHHHHTTSTTSCHHHHHHHHHHHHHHHHHHGGGGGGGHHHHHH
15552 T ss_pred HHHHHHHHHHHHHHHHHHhCc---c-chHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
15553 Confidence 455667778888777654210 0 01111 133556666666543 3567778888888877541 111111123566
15554
15555
15556 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR-SSASPKAAEAARLLLSDMWSSK 715 (747)
15557 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~-s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
15558 .+...+.+ .++.++..++.+|..++...+......+ ..+++.+...+. +. ++.++..++.++..++...
15559 T Consensus 238 ~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~~-~~~v~~~a~~~l~~l~~~~ 307 (416)
15560 T 5XAH_C 238 VLLSTAQE------ADPEVRSNAIFGMGVLAEHGGHPAQEHF-PKLLGLLFPLLARER-HDRVRDNICGALARLLMAS 307 (416)
15561 T ss_dssp HHHHHTTC------SSHHHHHHHHHHHHHHHHHSHHHHHTTH-HHHHHHHTHHHHHCC-CHHHHHHHHHHHHHHHHTS
15562 T ss_pred HHHHHhhc------CCHHHHHHHHHHHHHHHHhcCchHHhhH-HHHHHHHHHHhccCC-CHHHHHHHHHHHHHHHHhC
15563 Confidence 66666655 3678889999999998865332222222 235666777776 44 6778888888888877543
15564
15565
15566 No 372
15567 >5FRS_A SISTER CHROMATID COHESION PROTEIN PDS5; COHESIN, DNA REPLICATION, SISTER CHROMATID; 4.073A {SACCHAROMYCES CEREVISIAE}
15568 Probab=83.54 E-value=0.08 Score=57.55 Aligned_cols=149 Identities=7% Similarity=0.080 Sum_probs=99.5 Template_Neff=9.900
15569
15570 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
15571 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
15572 +++.|...+. +.++.++..|+.+|..+....+. . .... ....+++.++..+.+.++.++..++.++..+... +
15573 T Consensus 282 vl~~L~~~l~-~~~~~vR~~A~~~L~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~d~~~~vR~~a~~~l~~~~~~~~ 355 (703)
15574 T 5FRS_A 282 VIGFIYHELS-SENELFRKEATKLIGQILTSYSD---L-NFVS-THSDTFKAWISKIADISPDVRVEWTESIPQIIATRE 355 (703)
15575 T ss_pred hHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCCCc---c-cHHH-HchhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCH
15576 Confidence 5666666676 46778899999999988764221 0 0011 1245667777777778889999999999988764 2
15577
15578
15579 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
15580 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
15581 .. ...+++.+...+.+ .++.++..|+.+|+.+..... .........++.+...+.+. +..++..|+.
15582 T Consensus 356 ~~----~~~i~~~l~~~l~D------~d~~VR~~A~~~L~~~~~~~~--~~~~~~~~~l~~l~~~l~d~-~~~VR~~A~~ 422 (703)
15583 T 5FRS_A 356 DI----SKELNQALAKTFID------SDPRVRRTSVMIFNKVPVTEI--WKNITNKAIYTSLLHLAREK-HKEVRELCIN 422 (703)
15584 T ss_pred HH----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHhhcccCc--cccCCCcccHHHHHHHhcCC-CHHHHHHHHH
15585 Confidence 11 22356666666666 478999999999998865321 00111234567777777766 7789999999
15586
15587
15588 Q NP_000290.2 707 LLSDMWSSK 715 (747)
15589 Q Consensus 707 aLsnL~~~~ 715 (747)
15590 +|..+....
15591 T Consensus 423 ~L~~l~~~~ 431 (703)
15592 T 5FRS_A 423 TMAKFYSNS 431 (703)
15593 T ss_pred HHHHHHHhC
15594 Confidence 888777543
15595
15596
15597 No 373
15598 >4HM9_A Beta-catenin-like protein 1; all alpha-helical, armadillo repeats, PROTEIN; 3.1001A {Homo sapiens}
15599 Probab=83.50 E-value=0.087 Score=56.79 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=87.4 Template_Neff=8.100
15600
15601 Q NP_000290.2 246 TIPKAVQYLSS------QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP--NQNVQQAAAGALRNLVFR 317 (747)
15602 Q Consensus 246 iL~~Ll~lL~s------sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~--d~eVr~~AL~aLs~La~~ 317 (747)
15603 +++.|+..+.. .+...+..++.+|.+++...+.....+...++++.|+.++... ....+..+..+|..++..
15604 T Consensus 198 ~l~~Lv~~L~~l~e~~~~d~~~~~~al~iL~nL~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~~~k~~AaeiL~~L~~~ 277 (568)
15605 T 4HM9_A 198 VVALLVQNLERLDESVKEEADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKRLKAKMPFDANKLYCSEVLAILLQD 277 (568)
15606 T ss_dssp HHHHHHHHHTTCCTTSHHHHHHHHHHHHHHHHHHHHCGGGHHHHCCCCCHHHHHHHHHSSCCCCHHHHHHHHHHHHHHTT
15607 T ss_pred HHHHHHHHHhcccccccchHHHHHHHHHHHHHHhccCHHHHHHHHHCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcC
15608 Confidence 44555555554 4556778888999988865433333344456788888888764 466788889999988865
15609
15610
15611 Q NP_000290.2 318 STTNKLETRRQNGIREAVSLLRR-----TG---NAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVII 381 (747)
15612 Q Consensus 318 ~~~~~~~ll~~~IL~~Ll~lL~s-----s~---d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
15613 .......+...+.++.|+.++.. .. .......++.+|..++........++. ++++.|+.+|+.
15614 T Consensus 278 ~~~~r~~l~~~g~I~~LL~lL~~y~~~d~~~~~e~e~~en~~~aL~~L~~~~~~r~~f~~~~gv~lLv~lL~~ 350 (568)
15615 T 4HM9_A 278 NDENRELLGELDGIDVLLQQLSVFKRHNPSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLRE 350 (568)
15616 T ss_dssp CHHHHHHHHHTTHHHHHHHHHGGGTTSCCSSSHHHHHHHHHHHHHHHHTTSTHHHHHHHHTTHHHHHHHHHHH
15617 T ss_pred CHHHHHHHHhCchHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHCChHHHHHHHHhC
15618 Confidence 44444444445677777777731 11 123444557788887766555555555 778888888875
15619
15620
15621 No 374
15622 >5FRP_A SISTER CHROMATID COHESION PROTEIN PDS5; CELL CYCLE, CELL DIVISION, COHESIN; 2.895A {SACCHAROMYCES CEREVISIAE}
15623 Probab=83.43 E-value=0.082 Score=57.48 Aligned_cols=149 Identities=7% Similarity=0.080 Sum_probs=99.6 Template_Neff=9.900
15624
15625 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
15626 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
15627 +++.|...+. +.++.++..|+.+|..+....+. . .... ....+++.++..+.+.++.++..++.++..+... +
15628 T Consensus 282 vl~~L~~~l~-~~~~~vR~~A~~~L~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~d~~~~vR~~a~~~l~~~~~~~~ 355 (703)
15629 T 5FRP_A 282 VIGFIYHELS-SENELFRKEATKLIGQILTSYSD---L-NFVS-THSDTFKAWISKIADISPDVRVEWTESIPQIIATRE 355 (703)
15630 T ss_dssp THHHHHHHHT-CSSHHHHHHHHHHHHHHTTSCCS---S-CHHH-HTHHHHHHHHGGGGCSSHHHHHHHHHTHHHHHHHCC
15631 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCCC---c-CHHH-HCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCH
15632 Confidence 5666666676 46778899999999988764221 0 0011 1245667777777778889999999999988764 2
15633
15634
15635 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
15636 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
15637 .. ...+++.+...+.+ .++.++..|+.+|+.+..... .........++.+...+.+. +..++..|+.
15638 T Consensus 356 ~~----~~~i~~~l~~~l~D------~d~~VR~~A~~~L~~~~~~~~--~~~~~~~~~l~~l~~~l~d~-~~~VR~~A~~ 422 (703)
15639 T 5FRP_A 356 DI----SKELNQALAKTFID------SDPRVRRTSVMIFNKVPVTEI--WKNITNKAIYTSLLHLAREK-HKEVRELCIN 422 (703)
15640 T ss_dssp SC----SSHHHHHHHHHTTC------SSHHHHHHHHHHHHHSCHHHH--HHHCCCHHHHHHHHHGGGBS-CHHHHHHHHH
15641 T ss_pred HH----HHHHHHHHHHHhcC------CCHHHHHHHHHHHhhcChhHH--hhcCCchHHHHHHHHHHhcC-CHHHHHHHHH
15642 Confidence 11 22356666677666 478999999999998865311 00111234567777777766 7789999999
15643
15644
15645 Q NP_000290.2 707 LLSDMWSSK 715 (747)
15646 Q Consensus 707 aLsnL~~~~ 715 (747)
15647 +|..+....
15648 T Consensus 423 ~L~~l~~~~ 431 (703)
15649 T 5FRP_A 423 TMAKFYSNS 431 (703)
15650 T ss_dssp HHHHHHHHH
15651 T ss_pred HHHHHHHHH
15652 Confidence 888777543
15653
15654
15655 No 375
15656 >5GM6_G Prp8, Brr2, Snu114, Rse1, Cus1; spliceosome, RNA splicing, Bact, Catalytically; HET: GTP, ADP, ZN; 3.5A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
15657 Probab=83.42 E-value=0.077 Score=58.66 Aligned_cols=69 Identities=9% Similarity=-0.111 Sum_probs=31.7 Template_Neff=11.400
15658
15659 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVF 316 (747)
15660 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~ 316 (747)
15661 +.+...+.+.++.++..++.++..+...............+++.+...+.+.+..++..++.++..++.
15662 T Consensus 603 ~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~v~~~a~~~l~~l~~ 671 (971)
15663 T 5GM6_G 603 STILNHLKHKTPLVRQHAADLCAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLGSIINAMYCITS 671 (971)
15664 T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
15665 Confidence 333344444455566666665555543211111100111234444444444445566666666666554
15666
15667
15668 No 376
15669 >5ZWM_1 Pre-mRNA-splicing factor 8, U4/U6 small; spliceosome, assembly, pre-B complex, U1; HET: GTP; 3.4A {Saccharomyces cerevisiae S288c}
15670 Probab=83.42 E-value=0.077 Score=58.66 Aligned_cols=69 Identities=9% Similarity=-0.111 Sum_probs=31.7 Template_Neff=11.400
15671
15672 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVF 316 (747)
15673 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~ 316 (747)
15674 +.+...+.+.++.++..++.++..+...............+++.+...+.+.+..++..++.++..++.
15675 T Consensus 603 ~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~v~~~a~~~l~~l~~ 671 (971)
15676 T 5ZWM_1 603 STILNHLKHKTPLVRQHAADLCAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLGSIINAMYCITS 671 (971)
15677 T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHH
15678 T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
15679 Confidence 333344444455566666665555543211111100111234444444444445566666666666554
15680
15681
15682 No 377
15683 >3TJZ_B ADP-ribosylation factor 1, Coatomer subunit; protein trafficking, Golgi membrane, protein; HET: GNP; 2.9A {Saccharomyces cerevisiae}
15684 Probab=83.38 E-value=0.075 Score=50.15 Aligned_cols=102 Identities=16% Similarity=0.082 Sum_probs=56.5 Template_Neff=12.100
15685
15686 Q NP_000290.2 596 GLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL 675 (747)
15687 Q Consensus 596 iI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~ 675 (747)
15688 .++.+..++.+.+..++..++.+|..+...... ....+++.+..++.+ .++.++..++.+|..+....+..
15689 T Consensus 251 ~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~---~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~ 321 (355)
15690 T 3TJZ_B 251 LFDFIESCLRNKHEMVVYEAASAIVNLPGCSAK---ELAPAVSVLQLFCSS------PKAALRYAAVRTLNKVAMKHPSA 321 (355)
15691 T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHccCCHH---HHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHcCHHH
15692 Confidence 445555556555666666666666666543100 001233444444444 25667777778877776532211
15693
15694
15695 Q NP_000290.2 676 AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
15696 Q Consensus 676 ~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
15697 . ...++.+..++.+. +..++..|+.+|..+.
15698 T Consensus 322 ~-----~~~~~~l~~~l~~~-~~~vr~~a~~~L~~l~ 352 (355)
15699 T 3TJZ_B 322 V-----TACNLDLENLVTDA-NRSIATLAITTLLKTG 352 (355)
15700 T ss_pred H-----HHHHHHHHHHhcCC-CHHHHHHHHHHHHHhh
15701 Confidence 1 12335566666655 6677888888777764
15702
15703
15704 No 378
15705 >6CRI_R Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
15706 Probab=83.30 E-value=0.075 Score=53.54 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=51.9 Template_Neff=12.500
15707
15708 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
15709 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
15710 +++.+...+.+.++.++..++..+..+.... ....+++.+...+.+.++.++..++.++..+....+...
15711 T Consensus 100 ~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~-------~~~~~~~~l~~~l~~~~~~vr~~a~~~L~~~~~~~~~~~--- 169 (585)
15712 T 6CRI_R 100 MTNCIKNDLNHSTQFVQGLALCTLGCMGSSE-------MCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELM--- 169 (585)
15713 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhhCCHH-------HHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHCHHHH---
15714 Confidence 4444444555555566666666665554211 011234445555555556666666666666654322111
15715
15716
15717 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
15718 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
15719 ..+++.+...+. +.++.++..++.++..+..
15720 T Consensus 170 --~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~ 200 (585)
15721 T 6CRI_R 170 --EMFLPATKNLLN-EKNHGVLHTSVVLLTEMCE 200 (585)
15722 T ss_pred --HHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHH
15723 Confidence 234445555554 4455666666666666654
15724
15725
15726 No 379
15727 >6U62_A Regulatory-associated protein of mTOR, Ras-related; signaling complex, GTPase, lysosome, SIGNALING; HET: GDP, GTP;{Homo sapiens}
15728 Probab=83.02 E-value=0.095 Score=62.46 Aligned_cols=159 Identities=10% Similarity=0.013 Sum_probs=98.7 Template_Neff=8.000
15729
15730 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSN 621 (747)
15731 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsn 621 (747)
15732 ...|+++.++++|++ ...+.+...+.+...++.-+.. ....+++.+....++.+|.... +..+..++.+|+.
15733 T Consensus 468 l~~gifp~~~~ll~~-~~~~~~~~l~~iw~kil~~d~~-----~~~~l~~~~~~~~f~~~l~~~~~~~~~~~~~afiLa~ 541 (1392)
15734 T 6U62_A 468 LSVGIFPYVLKLLQS-SARELRPLLVFIWAKILAVDSS-----CQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILAV 541 (1392)
15735 T ss_dssp HHHTCHHHHHHGGGC-CCSTTHHHHHHHHHHHHTTCGG-----GHHHHHHTTTHHHHHHHHHSTTSCSSSHHHHHHHHHH
15736 T ss_pred HHcCcHHHHHHHHHc-cchhhHHHHHHHHHHHHhhCch-----hHHHHHhccchHHHHHhhcCCCCChhHHHHHHHHHHH
15737 Confidence 466778888888873 4445554445555555443221 1222234444555666665432 2244566667777
15738
15739
15740 Q NP_000290.2 622 MSRH-PLLH-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPK 699 (747)
15741 Q Consensus 622 La~~-~e~~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~e 699 (747)
15742 ++.. .... .....+++..+...|.. .++.++..++-+|+.|....+..+...+..+....|..++.+. .++
15743 T Consensus 542 ~~~~~~~~q~~~~~~~~~~~~~~~l~~------~~~~~r~W~~l~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~d~-~pe 614 (1392)
15744 T 6U62_A 542 IVNSYHTGQEACLQGNLIAICLEQLND------PHPLLRQWVAICLGRIWQNFDSARWCGVRDSAHEKLYSLLSDP-IPE 614 (1392)
15745 T ss_dssp HSTTCHHHHHHHHHTTHHHHHHTSTTC------SCHHHHHHHHHHHHHHSSSCHHHHHHHHTTTHHHHSGGGGGCS-STT
15746 T ss_pred HHhhCcchHHHHHhchHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCHHHHHHhhcccHHHHHHHHhcCC-CHH
15747 Confidence 7754 2222 22233455666666654 3688899999999999876555555555555667788888877 899
15748
15749
15750 Q NP_000290.2 700 AAEAARLLLSDMWSSK 715 (747)
15751 Q Consensus 700 Vr~aAL~aLsnL~~~~ 715 (747)
15752 ||.+|+.+|+.++...
15753 T Consensus 615 VRaaav~aL~~~i~~~ 630 (1392)
15754 T 6U62_A 615 VRCAAVFALGTFVGNS 630 (1392)
15755 T ss_dssp HHHHHHHHHHHHSCCT
15756 T ss_pred HHHHHHHHHHHhhCCC
15757 Confidence 9999999998887553
15758
15759
15760 No 380
15761 >6BCX_W mTOR, Target of rapamycin complex; PIKK, TRANSFERASE; HET: ATP; 3.0A {Homo sapiens}
15762 Probab=82.82 E-value=0.098 Score=62.11 Aligned_cols=159 Identities=10% Similarity=0.013 Sum_probs=98.0 Template_Neff=7.900
15763
15764 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSN 621 (747)
15765 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsn 621 (747)
15766 ...|+++.++++|++ ...+.+...+.+...++.-+.. ....+++.+....++.+|.... +..+..++.+|+.
15767 T Consensus 476 l~~gifp~~~~ll~~-~~~~~~~~l~~iw~kil~~d~~-----~~~~l~~~~~~~~f~~~l~~~~~~~~~~~~~a~iLa~ 549 (1343)
15768 T 6BCX_W 476 LSVGIFPYVLKLLQS-SARELRPLLVFIWAKILAVDSS-----CQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILAV 549 (1343)
15769 T ss_dssp HHHTCHHHHHHGGGC-CCGGGHHHHHHHHHHHHHHCGG-----GHHHHHHTTHHHHHHHHHTCTTSCHHHHHHHHHHHHH
15770 T ss_pred HHcCcHHHHHHHHHc-cchhhHHHHHHHHHHHHhhCcc-----hHHHHHhccchhHHHHhhcCCCCChhHHHHHHHHHHH
15771 Confidence 356778888888873 4444544444455555443221 1222234444555666665432 2234566667777
15772
15773
15774 Q NP_000290.2 622 MSRH-PLLH-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPK 699 (747)
15775 Q Consensus 622 La~~-~e~~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~e 699 (747)
15776 ++.. .... .....+++..+...|.. .++.++..++-+|+.|....+..+...+..+....+..++.+. .++
15777 T Consensus 550 ~~~~~~~~q~~~~~~~~~~~~~~~l~~------~~~~~r~W~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~d~-~pe 622 (1343)
15778 T 6BCX_W 550 IVNSYHTGQEACLQGNLIAICLEQLND------PHPLLRQWVAICLGRIWQNFDSARWCGVRDSAHEKLYSLLSDP-IPE 622 (1343)
15779 T ss_dssp HSTTCHHHHHHHHHTTHHHHHHHTTTC------SCHHHHHHHHHHHHHHTTTCHHHHHHHHHHTHHHHHGGGGGCS-SHH
15780 T ss_pred HHhhCchhHHHHHhchHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCHHHHHHhhcccHHHHHHHHhcCC-CHH
15781 Confidence 7654 2222 22333456666666654 3688899999999999876555555555555667788888877 899
15782
15783
15784 Q NP_000290.2 700 AAEAARLLLSDMWSSK 715 (747)
15785 Q Consensus 700 Vr~aAL~aLsnL~~~~ 715 (747)
15786 ||.+++.+|+.++...
15787 T Consensus 623 vRaa~v~aL~~~i~~~ 638 (1343)
15788 T 6BCX_W 623 VRCAAVFALGTFVGNS 638 (1343)
15789 T ss_dssp HHHHHHHHHHHHHTTC
15790 T ss_pred HHHHHHHHHHHhhCCC
15791 Confidence 9999999998887653
15792
15793
15794 No 381
15795 >4QMH_A LP04448p; PROTEIN BINDING, TOG DOMAIN; 1.652A {Drosophila melanogaster}
15796 Probab=82.76 E-value=0.081 Score=45.96 Aligned_cols=114 Identities=8% Similarity=0.065 Sum_probs=67.9 Template_Neff=12.700
15797
15798 Q NP_000290.2 595 KGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ 674 (747)
15799 Q Consensus 595 giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e 674 (747)
15800 .+++.+...+.+.++.++..++.+|..+.............+++.+...+.+ .++.++..++.++..++.....
15801 T Consensus 17 ~l~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~d------~~~~v~~~a~~~l~~l~~~~~~ 90 (241)
15802 T 4QMH_A 17 QITEALLKEMSDKDWKTRNEGLTKLQAIISEARLIKPSIGDLAPALAHRLVD------SNAKIAQTTLAICEQLATAMGA 90 (241)
15803 T ss_dssp GSCHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCSBCSCCTTHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHHGG
15804 T ss_pred HhhHHHHHhcCCccHHHHHHHHHHHHHHHHhCCcCcccHHHHHHHHHHHHcC------CCHHHHHHHHHHHHHHHHHhcH
15805 Confidence 3455566666677778888888888888764211110112345555666655 3678888888888888764322
15806
15807
15808 Q NP_000290.2 675 LAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
15809 Q Consensus 675 ~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
15810 ...... ..+++.+...+.+. +..++..++.+|..+.....
15811 T Consensus 91 ~~~~~~-~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~~~ 130 (241)
15812 T 4QMH_A 91 GCRNHV-RNLFPGFLHALGDN-KSFVRAAALNCINSFGEKGG 130 (241)
15813 T ss_dssp GGGGGH-HHHHHHHHHHTTCS-SHHHHHHHHHHHHHHHHHHC
15814 T ss_pred HHHHHH-HHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHhcC
15815 Confidence 111111 23455666666554 55677777777777665443
15816
15817
15818 No 382
15819 >6QH5_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
15820 Probab=82.76 E-value=0.083 Score=54.05 Aligned_cols=140 Identities=15% Similarity=0.148 Sum_probs=92.9 Template_Neff=12.200
15821
15822 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
15823 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
15824 .++.++..+. +.+..++..++.++..+...... . ...+++.+...+.+.++.++..++.+|..+.....
15825 T Consensus 75 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~~ 143 (621)
15826 T 6QH5_A 75 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE--------L--IRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 143 (621)
15827 T ss_pred hHHHHHHHhc-CCCHHHHHHHHHHHHHHhhcCHH--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCHHH
15828 Confidence 4556667776 46677888888888887653221 1 12355666777777788899999999888764311
15829
15830
15831 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15832 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15833 ...+++.+...+ .+ .++.++..++.+|..+....+.. +.....++.+..++.+. ++.++..++
15834 T Consensus 144 -----~~~l~~~l~~~l~~~~------~~~~vr~~a~~~L~~l~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~ 208 (621)
15835 T 6QH5_A 144 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLLNDQ-HLGVVTAAT 208 (621)
15836 T ss_pred -----HHHHHHHHHHHhcCCC------CCHHHHHHHHHHHHHHHHhChHH---ccHHHHHHHHHHHhcCC-CHHHHHHHH
15837 Confidence 112445555666 44 36788999999999887642221 11234567777777766 778888888
15838
15839
15840 Q NP_000290.2 706 LLLSDMWS 713 (747)
15841 Q Consensus 706 ~aLsnL~~ 713 (747)
15842 .+|..+..
15843 T Consensus 209 ~~L~~l~~ 216 (621)
15844 T 6QH5_A 209 SLITTLAQ 216 (621)
15845 T ss_pred HHHHHHHH
15846 Confidence 88888775
15847
15848
15849 No 383
15850 >6EMK_C Serine/threonine-protein kinase TOR2 (E.C.2.7.1.67,2.7.11.1), Target; target of rapamycin, torc2, FRB; 8.0A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
15851 Probab=82.75 E-value=0.086 Score=64.86 Aligned_cols=71 Identities=13% Similarity=0.124 Sum_probs=44.6 Template_Neff=11.300
15852
15853 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLE-ACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
15854 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~-~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
15855 +++.|+..+. +.+..++. .++.+|..++..... ....+ -..+++.+...+.+.+..++..++.+|..++..
15856 T Consensus 922 ~~~~L~~~l~-d~~~~v~~~~a~~~L~~i~~~~~~-----~~~~~-l~~l~~~l~~~l~~~~~~vr~~~~~~L~~l~~~ 993 (2474)
15857 T 6EMK_C 922 VIHNLMKILN-DPSLSIHHTAAIQAIMHIFQNLGL-----RCVSF-LDQIIPGIILVMRSCPPSQLDFYFQQLGSLISI 993 (2474)
15858 T ss_dssp TTCCCCCCTT-CCCCCCCCCCCTTTCCCCCCCCCC-----CCCCC-SSTTCCCCCCCCCCCCHHHHCCCCCCTTTCCCC
15859 T ss_pred HHHHHHHHHc-CCchHHHHHHHHHHHHHHHHHcch-----hhHHh-HhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
15860 Confidence 4566667776 34555555 778888887764221 01111 134566677777666677888888888888764
15861
15862
15863 No 384
15864 >5MU7_A Coatomer subunit beta, Coatomer subunit; coatomer, COPI, beta COP, delta; 2.57A {Chaetomium thermophilum var. thermophilum DSM 1495}
15865 Probab=82.68 E-value=0.082 Score=49.28 Aligned_cols=71 Identities=11% Similarity=-0.055 Sum_probs=38.3 Template_Neff=12.800
15866
15867 Q NP_000290.2 548 AIRTYLNLM-GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
15868 Q Consensus 548 ~I~~LL~LL-~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
15869 .++.++..+ . ++++.++..++.+|..+...... . .... .....++.+...+.+.++.++..++.+|..+..
15870 T Consensus 39 ~~~~l~~~l~~-~~~~~~r~~a~~~l~~~~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~ 110 (373)
15871 T 5MU7_A 39 LLMHIIRFVMP-SKSKPLKKLLYFYYEICPKLDSQ---G-KLKQ-EFILVCNGIRNDLQHPNEYIRGNTLRFLCKLRE 110 (373)
15872 T ss_dssp GHHHHHHHTTT-CCCHHHHHHHHHHHHHSCCBCTT---S-CBCT-HHHHHHHHHHHHTTCSSHHHHHHHHHHHTTCCC
15873 T ss_pred HHHHHHHHHcC-CCChhhHHHHHHHHHhccccCCc---c-hHHH-HHHHHHHHHHHHccCCCHHHHHHHHHHHHhccC
15874 Confidence 345555553 4 35666777777777776542111 0 0000 012345556666666666777777777766543
15875
15876
15877 No 385
15878 >6CRI_I Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
15879 Probab=82.65 E-value=0.081 Score=52.06 Aligned_cols=145 Identities=12% Similarity=0.047 Sum_probs=93.3 Template_Neff=13.200
15880
15881 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
15882 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
15883 .++.+...+. +.++.++..++.+|..+...... .....++++.+...+.+.++.++..++.+|..+....
15884 T Consensus 109 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 179 (570)
15885 T 6CRI_I 109 LCEPLRKCLK-DEDPYVRKTAAVCVAKLHDINAQ--------LVEDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHP 179 (570)
15886 T ss_dssp SHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHCHH--------HHHHHTHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHTT
15887 T ss_pred HHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhChh--------hhhccchHHHHHHHhcCCCHHHHHHHHHHHHHHHhhCC
15888 Confidence 4556667776 46778888999999988764321 1112456778888888888899999999999888652
15889
15890
15891 Q NP_000290.2 627 L-LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15892 Q Consensus 627 e-~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15893 . ........+++.+...+.+ .++.++..++.+|..+....... ....++.+...+.+. ++.++..++
15894 T Consensus 180 ~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~l~~~l~~~-~~~vr~~a~ 247 (570)
15895 T 6CRI_I 180 SSNLLDLNPQSINKLLTALNE------CTEWGQIFILDCLANYMPKDDRE-----AQSICERVTPRLSHA-NSAVVLSAV 247 (570)
15896 T ss_dssp STTCCCCCHHHHHHHHHHHTT------SCHHHHHHHHHHTTTCCCSSHHH-----HHHHHHHHGGGGGBS-CHHHHHHHH
15897 T ss_pred CcchhccCHHHHHHHHHHhhc------CCHHHHHHHHHHHHHhCCCCHHH-----HHHHHHHHHHHhcCC-CHHHHHHHH
15898 Confidence 1 1111112355555555554 25677778888888877542211 112455556666655 677788888
15899
15900
15901 Q NP_000290.2 706 LLLSDMWS 713 (747)
15902 Q Consensus 706 ~aLsnL~~ 713 (747)
15903 .++..+..
15904 T Consensus 248 ~~l~~l~~ 255 (570)
15905 T 6CRI_I 248 KVLMKFME 255 (570)
15906 T ss_dssp HHHHHHTT
15907 T ss_pred HHHHHHHH
15908 Confidence 87777764
15909
15910
15911 No 386
15912 >4QMI_B Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG domain; 1.9A {Homo sapiens}
15913 Probab=82.55 E-value=0.084 Score=45.96 Aligned_cols=112 Identities=11% Similarity=0.091 Sum_probs=68.9 Template_Neff=12.600
15914
15915 Q NP_000290.2 595 KGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP 673 (747)
15916 Q Consensus 595 giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~ 673 (747)
15917 .+++.+...+.+.++.++..++.++..+...... ...+ ..+++.+...+.+ .++.++..++.++..++...+
15918 T Consensus 19 ~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~-~~~~~~l~~~l~d------~~~~vr~~a~~~l~~l~~~~~ 91 (240)
15919 T 4QMI_B 19 KITSELVSKIGDKNWKIRKEGLDEVAGIINDAKFIQPNI-GELPTALKGRLND------SNKILVQQTLNILQQLAVAMG 91 (240)
15920 T ss_dssp GSCHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCSBCSCC-TTHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHHG
15921 T ss_pred hccHHHHHHhcCCCHHHHHHHHHHHHHHHcCchHhccch-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhc
15922 Confidence 3455666667777788888888888888765211 1111 2345556666655 367888888888888876532
15923
15924
15925 Q NP_000290.2 674 QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
15926 Q Consensus 674 e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
15927 ....... ...++.++..+.+. +..++..++.++..+....
15928 T Consensus 92 ~~~~~~~-~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~~ 131 (240)
15929 T 4QMI_B 92 PNIKQHV-KNLGIPIITVLGDS-KNNVRAAALATVNAWAEQT 131 (240)
15930 T ss_dssp GGGGGGC-CCCCHHHHHHTTCS-SHHHHHHHHHHHHHHHHHH
15931 T ss_pred HHHHHHH-HHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHh
15932 Confidence 2111111 23456666666655 5667777777777776553
15933
15934
15935 No 387
15936 >4QMJ_A Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG DOMAIN; 2.498A {Homo sapiens}
15937 Probab=82.55 E-value=0.084 Score=45.96 Aligned_cols=112 Identities=11% Similarity=0.091 Sum_probs=68.9 Template_Neff=12.600
15938
15939 Q NP_000290.2 595 KGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP 673 (747)
15940 Q Consensus 595 giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~ 673 (747)
15941 .+++.+...+.+.++.++..++.++..+...... ...+ ..+++.+...+.+ .++.++..++.++..++...+
15942 T Consensus 19 ~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~-~~~~~~l~~~l~d------~~~~vr~~a~~~l~~l~~~~~ 91 (240)
15943 T 4QMJ_A 19 KITSELVSKIGDKNWKIRKEGLDEVAGIINDAKFIQPNI-GELPTALKGRLND------SNKILVQQTLNILQQLAVAMG 91 (240)
15944 T ss_dssp TSCHHHHHHHTCSSHHHHHHHHHHHHHHHHHHSSBCSCC-TTHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHHG
15945 T ss_pred hccHHHHHHhcCCCHHHHHHHHHHHHHHHcCchHhccch-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhc
15946 Confidence 3455666667777788888888888888765211 1111 2345556666655 367888888888888876532
15947
15948
15949 Q NP_000290.2 674 QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
15950 Q Consensus 674 e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
15951 ....... ...++.++..+.+. +..++..++.++..+....
15952 T Consensus 92 ~~~~~~~-~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~~ 131 (240)
15953 T 4QMJ_A 92 PNIKQHV-KNLGIPIITVLGDS-KNNVRAAALATVNAWAEQT 131 (240)
15954 T ss_dssp GGGGGGC-CCCCHHHHHGGGCS-SHHHHHHHHHHHHHHHHHH
15955 T ss_pred HHHHHHH-HHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHh
15956 Confidence 2111111 23456666666655 5667777777777776553
15957
15958
15959 No 388
15960 >6MZG_E Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: GTP, GDP; 3.208A {Sus scrofa}
15961 Probab=82.53 E-value=0.084 Score=52.43 Aligned_cols=147 Identities=12% Similarity=0.077 Sum_probs=92.8 Template_Neff=12.700
15962
15963 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQ--LIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH 625 (747)
15964 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~--~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~ 625 (747)
15965 ++.+...+. +.++.++..++..|..++..... . .. .. .-..+++.+...+ .+.++.++..++.++..++..
15966 T Consensus 315 ~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~---~-~~~~~~-~~~~i~~~l~~~l~~d~~~~v~~~a~~~l~~l~~~ 388 (554)
15967 T 6MZG_E 315 PADFQTRIS-STKWKDRVEALEEIHNNVLKPVK---K-LAHKNQ-DYSDYLRVLANVIQKDANVQAVTIAANSVQLLCNS 388 (554)
15968 T ss_dssp CSTTTTTTT-CSCHHHHHHHHHHCCCCCCTTCS---C-BCCSSC-CTHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHH
15969 T ss_pred CHHHHHHhc-CCCHHHHHHHHHHHHHhhhcchh---H-HhccCC-cHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHH
15970 Confidence 344666666 46677888899999888764221 0 00 01 1135677777777 777888999999999988865
15971
15972
15973 Q NP_000290.2 626 P-LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
15974 Q Consensus 626 ~-e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
15975 . .. .......+++.+...+.+ .+..++..++.+|..++.... ...+++.+...+.+. ++.++..
15976 T Consensus 389 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~-------~~~~~~~l~~~l~~~-~~~vr~~ 454 (554)
15977 T 6MZG_E 389 LRSNFTRSYGAIVLVPLLERTKE------KKPSVNEAICSALDAVATYCG-------FDDCLEETLNYMKHK-TPQVRIE 454 (554)
15978 T ss_dssp STTCCSSHHHHHHHHHHHHGGGC------CCHHHHHHHHHHHHHHHTTSS-------SSSHHHHHHHHHTCS-CHHHHHH
15979 T ss_pred hhccccHHHHHhhHHHHHHHhhh------ccHHHHHHHHHHHHHHHHHcC-------HHHHHHHHHHHhcCC-CHHHHHH
15980 Confidence 1 11 101112356666666655 256788888888888876421 123455666666554 6778888
15981
15982
15983 Q NP_000290.2 704 ARLLLSDMWSSK 715 (747)
15984 Q Consensus 704 AL~aLsnL~~~~ 715 (747)
15985 ++.+|..++...
15986 T Consensus 455 ~~~~l~~l~~~~ 466 (554)
15987 T 6MZG_E 455 CTKFLTRMLQGW 466 (554)
15988 T ss_dssp HHHHHHHHHHTC
15989 T ss_pred HHHHHHHHHccC
15990 Confidence 888888776543
15991
15992
15993 No 389
15994 >1B3U_A PROTEIN PHOSPHATASE PP2A, 65 KD; SCAFFOLD PROTEIN, PP2A, PHOSPHORYLATION, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.2
15995 Probab=82.32 E-value=0.085 Score=51.84 Aligned_cols=147 Identities=13% Similarity=0.119 Sum_probs=94.4 Template_Neff=13.400
15996
15997 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
15998 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
15999 ..++.+...+. +.++.++..++.+|..+...... .. ....+++.+...+.+.++.++..++.++..+....
16000 T Consensus 164 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-------~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~ 234 (588)
16001 T 1B3U_A 164 ELRQYFRNLCS-DDTPMVRRAAASKLGEFAKVLEL-------DN-VKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLL 234 (588)
16002 T ss_dssp HHHHHHHHHHT-CSCHHHHHHHHHHHHHHHHTSCH-------HH-CCCCCHHHHHHHHTCSCHHHHTTHHHHHHHHHHHS
16003 T ss_pred HHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHcCh-------hh-hhhhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHhC
16004 Confidence 35566667776 46778888898888888763221 11 12456677777777778888999999888887641
16005
16006
16007 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
16008 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
16009 ... .....+++.+..++.+ .++.++..++.++..+....+. .......++.+...+.+. ++.++..++.
16010 T Consensus 235 ~~~-~~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~~~~~~~~---~~~~~~~~~~l~~~l~~~-~~~~r~~a~~ 303 (588)
16011 T 1B3U_A 235 PQE-DLEALVMPTLRQAAED------KSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDC-EAEVRAAASH 303 (588)
16012 T ss_dssp CHH-HHHHHTHHHHHHHHTC------SSHHHHHHHHHTHHHHHHHHCH---HHCCCCCHHHHHHHHTCS-SHHHHHHHHH
16013 T ss_pred CHH-HHHHHHHHHHHHHHhC------CCHHHHHHHHhhHHHHHHHHCC---CCCHHhHHHHHHHHhccC-HHHHHHHHHH
16014 Confidence 111 1112345556666655 3677888888888888754221 111224566666666655 6778888888
16015
16016
16017 Q NP_000290.2 707 LLSDMWS 713 (747)
16018 Q Consensus 707 aLsnL~~ 713 (747)
16019 ++..+..
16020 T Consensus 304 ~l~~l~~ 310 (588)
16021 T 1B3U_A 304 KVKEFCE 310 (588)
16022 T ss_dssp HHHHHHH
16023 T ss_pred HHHHHHH
16024 Confidence 8877765
16025
16026
16027 No 390
16028 >2OF3_A ZYG-9; Multifunctional macromolecule, Kinetochore, microtubule, XMAP215; 1.9A {Caenorhabditis elegans}
16029 Probab=81.96 E-value=0.098 Score=48.11 Aligned_cols=150 Identities=9% Similarity=-0.036 Sum_probs=91.9 Template_Neff=11.200
16030
16031 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
16032 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
16033 .++.+...+. +.++.++..++.++..++..... .........-..+++.++..+.+.+..++..+..+|..+.....
16034 T Consensus 88 l~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~--~~~~~~~~~~~~ll~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 164 (266)
16035 T 2OF3_A 88 LLKWCTLRFF-ETNPAALIKVLELCKVIVELIRD--TETPMSQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVG 164 (266)
16036 T ss_dssp HHHHHHHHTT-SCCHHHHHHHHHHHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHC
16037 T ss_pred HHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHh--CCCCCCHHHHHhHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhhC
16038 Confidence 3455555666 46677888888888888764221 00000000013456677777777777788888888887765421
16039
16040
16041 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
16042 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
16043 . ..+++.+...+.+ .++.++..++.+|..+........... ..+++.+...+.+. ++.++..++.+
16044 T Consensus 165 ~-----~~~~~~l~~~l~~------~~~~~r~~~l~~l~~~~~~~~~~~~~~--~~ii~~l~~~l~d~-~~~VR~~a~~~ 230 (266)
16045 T 2OF3_A 165 P-----LKMTPMLLDALKS------KNARQRSECLLVIEYYITNAGISPLKS--LSVEKTVAPFVGDK-DVNVRNAAINV 230 (266)
16046 T ss_dssp H-----HHHHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHHCSGGGGG--GCHHHHHGGGGGCS-SHHHHHHHHHH
16047 T ss_pred H-----HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhCCccccc--ChHHHHHHHHHcCC-CHHHHHHHHHH
16048 Confidence 1 1234445555544 357778888888888775432211111 34667777777766 78899999999
16049
16050
16051 Q NP_000290.2 708 LSDMWSS 714 (747)
16052 Q Consensus 708 LsnL~~~ 714 (747)
16053 +..+...
16054 T Consensus 231 l~~l~~~ 237 (266)
16055 T 2OF3_A 231 LVACFKF 237 (266)
16056 T ss_dssp HHHHHHH
16057 T ss_pred HHHHHHH
16058 Confidence 8888754
16059
16060
16061 No 391
16062 >4I5L_D PP2A A alpha subunit (9-589); EF Hand, Phosphatase, CDC6 (Substrate); HET: FGA, ACB, DAL, MLI, PEG, 1ZN, MAA; 2.43A {Microcystis aeruginosa}
16063 Probab=81.77 E-value=0.092 Score=51.50 Aligned_cols=147 Identities=13% Similarity=0.130 Sum_probs=94.5 Template_Neff=13.400
16064
16065 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
16066 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
16067 .+++.+...+. +.++.++..++.+|..+...... . . ....+++.+...+.+.++.++..++.++..+....
16068 T Consensus 160 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~ 230 (584)
16069 T 4I5L_D 160 ELRQYFRNLCS-DDTPMVRRAAASKLGEFAKVLEL------D-N-VKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLL 230 (584)
16070 T ss_dssp HHHHHHHHHHT-CSSHHHHHHHHHHHHHHHTTSCH------H-H-CCCCCHHHHHHHTTCSCHHHHTTHHHHHHHHHHHS
16071 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHcCh------h-h-hhcchHHHHHHHhCCCCHHHHHHHHHHHHHHHHhC
16072 Confidence 34566667776 46778888899888888764221 1 1 12456677777787778888999999988887641
16073
16074
16075 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
16076 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
16077 ... .....+++.+..++.+ .++.++..++.++..+....+. .......++.+...+.+. ++.++..++.
16078 T Consensus 231 ~~~-~~~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~ 299 (584)
16079 T 4I5L_D 231 PQE-DLEALVMPTLRQAAED------KSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDC-EAEVRAAASH 299 (584)
16080 T ss_dssp CTT-THHHHTHHHHHHHHTC------SSHHHHHHHHHTHHHHHHHHHH---HHCCCCCHHHHHHHHTCS-SHHHHHHHHT
16081 T ss_pred CHH-HHHHHHHHHHHHHhhC------CCHHHHHHHHHHHHHHHHHHCC---CCChhhHHHHHHHHhcCC-cHHHHHHHHH
16082 Confidence 111 1112345556666655 3677888888888888754221 111224566666666655 6778888888
16083
16084
16085 Q NP_000290.2 707 LLSDMWS 713 (747)
16086 Q Consensus 707 aLsnL~~ 713 (747)
16087 ++..+..
16088 T Consensus 300 ~l~~l~~ 306 (584)
16089 T 4I5L_D 300 KVKEFCE 306 (584)
16090 T ss_dssp THHHHHH
16091 T ss_pred HHHHHHH
16092 Confidence 8887765
16093
16094
16095 No 392
16096 >4Y5J_A Mini spindles TOG3; XMAP215, TOG, microtubule polymerization; 2.303A {Drosophila melanogaster}
16097 Probab=81.72 E-value=0.097 Score=46.19 Aligned_cols=71 Identities=13% Similarity=0.043 Sum_probs=45.8 Template_Neff=12.300
16098
16099 Q NP_000290.2 548 AIRT-YLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIA---RLLQSGNSDVVRSGASLLSNMS 623 (747)
16100 Q Consensus 548 ~I~~-LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll---~LL~s~d~eVr~~AL~aLsnLa 623 (747)
16101 .++. ++..+. +.++.++..++..|..++..... .... ....+++.+. ..+.+.++.++..++.++..++
16102 T Consensus 15 ~l~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~-----~~~~-~~~~l~~~l~~l~~~l~d~~~~v~~~a~~~l~~l~ 87 (248)
16103 T 4Y5J_A 15 ILPAEILNGLV-DSNWKNRLAAVEQLLGEISGFDA-----KQAG-ISQILIRTISGRKPGLKEMNFQVLKFKLDIIRSVA 87 (248)
16104 T ss_dssp CCCHHHHHHHH-CSSHHHHHHHHHHHHHHGGGSCT-----TSTT-HHHHHHHHHHSSSSGGGCSSHHHHHHHHHHHHHHH
16105 T ss_pred hcCHHHHHhhc-CcCHHHHHHHHHHHHHHHccCch-----hccc-hHHHHHHHHhcCCCchhhccHHHHHHHHHHHHHHH
16106 Confidence 4555 777776 46778888899999888764221 0111 1123444444 5666667788888888888887
16107
16108
16109 Q NP_000290.2 624 RH 625 (747)
16110 Q Consensus 624 ~~ 625 (747)
16111 ..
16112 T Consensus 88 ~~ 89 (248)
16113 T 4Y5J_A 88 EN 89 (248)
16114 T ss_dssp HH
16115 T ss_pred Hh
16116 Confidence 54
16117
16118
16119 No 393
16120 >4P6Z_G BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
16121 Probab=81.57 E-value=0.1 Score=53.70 Aligned_cols=137 Identities=17% Similarity=0.119 Sum_probs=87.9 Template_Neff=12.000
16122
16123 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL 628 (747)
16124 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~ 628 (747)
16125 +..++.++. +.+..++..++.+|..+....+. . ...+++.+...+.+.++.++..++.+|..+.....
16126 T Consensus 81 ~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~- 148 (627)
16127 T 4P6Z_G 81 QLECLKLIA-SQKFTDKRIGYLGAMLLLDERQD--------V--HLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEM- 148 (627)
16128 T ss_dssp HHHHHHHHT-SSSHHHHHHHHHHHHHHCCTTSC--------C--HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHCCHHH-
16129 T ss_pred HHHHHHHHc-CCCCchhHHHHHHHHHHCCCChH--------H--HHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCCHHH-
16130 Confidence 344556666 46677777888888777653221 1 12345566666777778888888888887764211
16131
16132
16133 Q NP_000290.2 629 HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
16134 Q Consensus 629 ~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
16135 ...+++.+..++.+ .++.++..++.+|..+....+... ..+++.|...+.+. ++.++..++.++
16136 T Consensus 149 ----~~~~~~~l~~~l~~------~~~~vr~~a~~~L~~l~~~~~~~~-----~~~~~~l~~~l~~~-~~~vr~~a~~~l 212 (627)
16137 T 4P6Z_G 149 ----CRDLAGEVEKLLKT------SNSYLRKKAALCAVHVIRKVPELM-----EMFLPATKNLLNEK-NHGVLHTSVVLL 212 (627)
16138 T ss_dssp ----HHHHHHHHHHHHTC------SCHHHHHHHHHHHHHHHHHCSGGG-----GGGHHHHTTCTTCC-CHHHHHHHHHHH
16139 T ss_pred ----HHHHHHHHHHHhhC------CCHHHHHHHHHHHHHHHHHCHHHH-----HHHHHHHHHHHhCC-CHHHHHHHHHHH
16140 Confidence 12345666666665 367888889999988876433221 24566677777655 677888888888
16141
16142
16143 Q NP_000290.2 709 SDMWS 713 (747)
16144 Q Consensus 709 snL~~ 713 (747)
16145 ..+..
16146 T Consensus 213 ~~~~~ 217 (627)
16147 T 4P6Z_G 213 TEMCE 217 (627)
16148 T ss_dssp HHHHH
16149 T ss_pred HHHHH
16150 Confidence 77754
16151
16152
16153 No 394
16154 >5KC2_B Phosphatidylinositol 3-kinase VPS34 (E.C.2.7.1.137), Serine/threonine-protein; autophagy, phosphatidylinositol 3-kinase (PtdIns3K), endocytosis; 28.0A {Saccharomyces cerevisiae}
16155 Probab=81.46 E-value=0.11 Score=61.49 Aligned_cols=126 Identities=13% Similarity=0.064 Sum_probs=72.5 Template_Neff=9.500
16156
16157 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
16158 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
16159 ++.|..++.+.++.++..++.+|..+.... ....+.. ..++.|+.++.+.++.++..++.+|..+..........+.
16160 T Consensus 621 l~~L~~~l~d~~~~vR~~a~~al~~l~~~~--~~~~~~~-~~lp~L~~lL~d~~~~vr~~al~aL~~L~~~~~~~~~~~~ 697 (1454)
16161 T 5KC2_B 621 LSHLITYLNDKDPALRVSLIQTISGISILL--GTVTLEQ-YILPLLIQTITDSEELVVISVLQSLKSLFKTGLIRKKYYI 697 (1454)
16162 T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhh--HHHHHHH-cCHHHHHHHhcCCCHHHHHHHHHHHHHHhhCCHHHHHHHH
16163 Confidence 444555555566667777777776666432 1112222 2266777777776777788888888877653322222221
16164
16165
16166 Q NP_000290.2 327 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRV 379 (747)
16167 Q Consensus 327 ~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL 379 (747)
16168 ..++.+..++. +.++.++..+..+|..|+...... .....+++.|+.+|
16169 T Consensus 698 --~~l~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~~-~~~~~~~~~L~~~L 746 (1454)
16170 T 5KC2_B 698 --DISKTTSPLLL-HPNNWIRQFTLMIIIEIINKLSKA-EVYCILYPIIRPFF 746 (1454)
16171 T ss_pred --HHHHHHHHHHC-CCCHHHHHHHHHHHHHHhcCCCCH-HHHcChHHHHHHHh
16172 Confidence 25556666665 457778888888888877643221 11134555555555
16173
16174
16175 No 395
16176 >6MZG_E Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: GTP, GDP; 3.208A {Sus scrofa}
16177 Probab=81.15 E-value=0.1 Score=51.71 Aligned_cols=151 Identities=11% Similarity=0.102 Sum_probs=93.6 Template_Neff=12.700
16178
16179 Q NP_000290.2 550 RTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIAR-LLQSGNSDVVRSGASLLSNMSRHPLL 628 (747)
16180 Q Consensus 550 ~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~-LL~s~d~eVr~~AL~aLsnLa~~~e~ 628 (747)
16181 +.+...+. +.++.++..++.+|..++..... ........ ....+++.++. ++.+.++.++..++.+|..++.....
16182 T Consensus 57 ~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-~~~~~~~~-~~~~~l~~l~~~~~~~~~~~vr~~a~~~L~~l~~~~~~ 133 (554)
16183 T 6MZG_E 57 ELFASYIV-DSNVVAQENAIIALHTLLEYISQ-VPNVSTSK-LRLQWIPPLVEKGLSSSRAATKAKATDCIMLLTQSDTS 133 (554)
16184 T ss_dssp HHHHHHTT-CSSHHHHHHHHHHHHHHHHHTCS-SSCCTHHH-HHHHHHHHHCCCCCSCSCHHHHHHHHHHHHHHHHTSSS
16185 T ss_pred HHHHHhcC-CccHHHHHHHHHHHHHHHHHHhc-CCCCCcHH-HHHhcHHHHHHHhccCCcHHHHHHHHHHHHHHHhcccc
16186 Confidence 55666776 47788899999999988764221 00000001 11345666666 45666788889999999888754111
16187
16188
16189 Q NP_000290.2 629 HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK---QYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
16190 Q Consensus 629 ~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~---~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
16191 ...+++.+...+.+ .++.++..++.+|..++........ ......+++.+...+.+. ++.++..++
16192 T Consensus 134 ----~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~-~~~vr~~a~ 202 (554)
16193 T 6MZG_E 134 ----IQQTVNLMLPSLSN------KLPRLVSSCVKCLATIIEEFGFINVSDINILLSEILEPLPKLSSHA-DRNVRSETM 202 (554)
16194 T ss_dssp ----SHHHHHHHSGGGGC------SCHHHHHHHHHHHHHHHHHTCSCSCSCHHHHHHHHHSSHHHHTTCS-SHHHHHHHH
16195 T ss_pred ----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhCCCccccccccHHHHHHHHHHHhhcC-CHHHHHHHH
16196 Confidence 11244555555554 3677888899999888764221110 001234567777777766 788999999
16197
16198
16199 Q NP_000290.2 706 LLLSDMWSS 714 (747)
16200 Q Consensus 706 ~aLsnL~~~ 714 (747)
16201 .+|..+...
16202 T Consensus 203 ~~l~~l~~~ 211 (554)
16203 T 6MZG_E 203 NLILQIYKW 211 (554)
16204 T ss_dssp HHHHHHHHH
16205 T ss_pred HHHHHHHHH
16206 Confidence 998888754
16207
16208
16209 No 396
16210 >6MZE_Z Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: MG, GTP, GDP; 3.6A {Sus scrofa}
16211 Probab=81.14 E-value=0.1 Score=51.20 Aligned_cols=108 Identities=11% Similarity=0.069 Sum_probs=63.0 Template_Neff=12.900
16212
16213 Q NP_000290.2 600 IARLLQSGNSDVVRSGASLLSNMSRHPL-LHR---VMGNQVFPEVTRLL-TSHTGNTSNSEDILSSACYTVRNLMASQPQ 674 (747)
16214 Q Consensus 600 Ll~LL~s~d~eVr~~AL~aLsnLa~~~e-~~~---ll~~giI~~Ll~LL-~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e 674 (747)
16215 +...+.+.+..++..++.+|..++.... ... .....+++.+...+ .+ .++.++..++.++..++.....
16216 T Consensus 300 l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~d------~~~~v~~~a~~~l~~l~~~~~~ 373 (536)
16217 T 6MZE_Z 300 FQTRISSTKWKDRVEALEEIHNNVLKPVKKLAHKNQDYSDYLRVLANVIQKD------ANVQAVTIAANSVQLLCNSLRS 373 (536)
16218 T ss_dssp GHHHHSCSSHHHHHHHHHHCCCCCCSSCSCBCCTTCCCTTTHHHHHHHHHHC------SCHHHHHHHHHHHHHHHHHTTT
16219 T ss_pred HHHHhhcCCHHHHHHHHHHHHHHhhccchhhccCCCCHHHHHHHHHHHHhcC------chHHHHHHHHHHHHHHHHHccc
16220 Confidence 4455555667778888888888775411 100 11123556666666 54 3678888899999888764322
16221
16222
16223 Q NP_000290.2 675 LAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
16224 Q Consensus 675 ~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
16225 .........+++.++..+.+. +..++..++.+|..++..
16226 T Consensus 374 ~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a~~~l~~l~~~ 412 (536)
16227 T 6MZE_Z 374 NFTRSYGAIVLVPLLERTKEK-KPSVNEAICSALDAVATY 412 (536)
16228 T ss_dssp CCSSHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHT
16229 T ss_pred cccHHHHHHHHHHHHHHhhcc-CHHHHHHHHHHHHHHHHh
16230 Confidence 111011123455666666554 566777777777776654
16231
16232
16233 No 397
16234 >6RXU_UJ Periodic tryptophan protein 2-like protein; ribosome, ribosome biogenesis, rRNA; HET: GTP; 3.5A {Chaetomium thermophilum}
16235 Probab=80.93 E-value=0.12 Score=62.49 Aligned_cols=152 Identities=9% Similarity=0.051 Sum_probs=85.8 Template_Neff=9.700
16236
16237 Q NP_000290.2 548 AIRTYLNLMGKS-----KKDATLEACAGALQNLTASKGLMSSGMSQ--LIGLKEKGLPQIARLLQSG--------NSDVV 612 (747)
16238 Q Consensus 548 ~I~~LL~LL~ss-----~d~eVr~~AL~aL~nLs~~s~~~s~~~~~--~llie~giI~~Ll~LL~s~--------d~eVr 612 (747)
16239 +++.++..+... .+..++..++.+|..++..... .... .. -..+++.|...+... ...++
16240 T Consensus 1625 il~~ll~~L~~~~~~~~~~~~v~~~~l~~L~~l~~~~~~---~~~~~~~~--~~~ll~~L~~~L~~~~~~~~~~~~~~v~ 1699 (1802)
16241 T 6RXU_UJ 1625 IVDASVKALKAVDFAVPEERNLWKRVLCTLAKCFEHDQD---GFWQAPAH--FGAVAPVLVEQFLRAEGQVTATNVNDVI 1699 (1802)
16242 T ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCh---hhhcChhH--HHHHHHHHHHHHhCCCCCCCccccHHHH
16243 Confidence 345555555521 2456777788888877764221 0000 11 134556666666532 23567
16244
16245
16246 Q NP_000290.2 613 RSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC 692 (747)
16247 Q Consensus 613 ~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL 692 (747)
16248 ..++.+++.++.......+. ..+++.++..+.+ .++.++..++.++..++.........+. ..+++.+...+
16249 T Consensus 1700 ~~ai~~L~~l~~~~~~~~~~-~~l~~~ll~~l~~------~~~~vR~~al~~L~~l~~~~g~~~~~~l-~~ii~~L~elL 1771 (1802)
16250 T 6RXU_UJ 1700 QDVVPAVVELAAAVESQEHY-KEINTALLKHLRN------GSPGVRLAVVKCQQAITAKLGEDWLHLL-PEMLPYISELQ 1771 (1802)
16251 T ss_pred HHHHHHHHHHHHHhCCchHH-HhHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHcHhhHHhH-HHHHHHHHHHh
16252 Confidence 77888888877531111111 1234445555544 3567888999999988765332222222 24567777777
16253
16254
16255 Q NP_000290.2 693 RSSASPKAAEAARLLLSDMWS 713 (747)
16256 Q Consensus 693 ~s~~d~eVr~aAL~aLsnL~~ 713 (747)
16257 ++. ++.++..+..++..+..
16258 T Consensus 1772 eD~-d~~V~~~a~~~l~~l~~ 1791 (1802)
16259 T 6RXU_UJ 1772 DDD-DEVVERENRRWIVGIEE 1791 (1802)
16260 T ss_pred cCC-CHHHHHHHHHHHHHHHH
16261 Confidence 766 77788888777776654
16262
16263
16264 No 398
16265 >5FVM_B SERINE/THREONINE-PROTEIN KINASE TOR2, TARGET OF; TRANSFERASE, CRYO-EM, TOR, LST8, MTOR; 6.7A {KLUYVEROMYCES MARXIANUS}
16266 Probab=80.75 E-value=0.12 Score=63.47 Aligned_cols=147 Identities=12% Similarity=0.092 Sum_probs=75.7 Template_Neff=11.500
16267
16268 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
16269 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
16270 +++.+...+. + ..++..++.++..++..... ....+ -..+++.++..+.+.+..++..++.++..+.....
16271 T Consensus 1008 i~~~l~~~l~-~--~~vr~~a~~~l~~l~~~~~~-----~~~~~-~~~ll~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~ 1078 (2471)
16272 T 5FVM_B 1008 IVDVISEFFP-V--LKLQLTIISVIESLSRALEG-----EFNPH-LPTILSLFLDVLEKDQSNKKVVSVRILKSLVVFGP 1078 (2471)
16273 T ss_dssp HHHTTC------------CTHHHHHHHHHTTSSC-----CHHHH-HHHHHHHHHHHHC----CCHHHHHHHHHHHHHHCS
16274 T ss_pred HHHHHHHHcc-c--hhHHHHHHHHHHHHHHHccc-----ChHHH-HHHHHHHHHHHHccCCCCcHHHHHHHHHHHHHHhh
16275 Confidence 3444555444 1 45666778888877754221 01111 23566777777776666677777777776654321
16276
16277
16278 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
16279 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
16280 . ...+ ..+++.+...+.+ .++.++..++.+|..++..... .. ....++..++..+.+. ++.++..++.
16281 T Consensus 1079 ~~~~~l-~~il~~l~~~l~~------~~~~vr~~al~~l~~l~~~~~~--~~-~~~~i~~~l~~~l~~~-~~~vr~~a~~ 1147 (2471)
16282 T 5FVM_B 1079 HLEEYV-HLVLPTIIKLSEF------SSGNLKKAAIITIGRLSKNVNA--LE-MSSRIVQALVRVLNTS-ETEYVKATMN 1147 (2471)
16283 T ss_dssp SCCCHH-HHHHHHHHTTC---------CCHHHHHHHHHHHHHHHC-CC--HH-HHHHHHHHHHHHCC---CTHHHHHHHH
16284 T ss_pred hHHHHH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhhCCh--HH-HHHHHHHHHHHHHcCC-ChHHHHHHHH
16285 Confidence 1 1111 2355666666655 2567888888888888754221 11 1124566666777655 6677888888
16286
16287
16288 Q NP_000290.2 707 LLSDMWSS 714 (747)
16289 Q Consensus 707 aLsnL~~~ 714 (747)
16290 +|..++..
16291 T Consensus 1148 ~l~~l~~~ 1155 (2471)
16292 T 5FVM_B 1148 TLSLLLLQ 1155 (2471)
16293 T ss_dssp HHHHHHHC
16294 T ss_pred HHHHHHHH
16295 Confidence 88777643
16296
16297
16298 No 399
16299 >6GWC_C Tubulin alpha chain, Tubulin beta; microtubule, ARTIFICIAL PROTEIN, ALPHAREP, cytoskeleton; HET: GTP, MES, PGE; 2.6A {Ovis aries}
16300 Probab=80.69 E-value=0.11 Score=45.32 Aligned_cols=49 Identities=8% Similarity=0.093 Sum_probs=29.6 Template_Neff=12.200
16301
16302 Q NP_000290.2 654 SEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
16303 Q Consensus 654 d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
16304 ++.++..++.+|..+... ..++.+..++.+. ++.++..++.++..+...
16305 T Consensus 120 ~~~~r~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~ 168 (232)
16306 T 6GWC_C 120 DTTVRRIAATALGKIGDE-----------RAVEPLIKALKDE-DAAVRLTAARALGEIGDE 168 (232)
16307 T ss_pred CHHHHHHHHHHHHHhccc-----------chHHHHHHHhcCC-CHHHHHHHHHHHHHhCCh
16308 Confidence 455556666666555321 2344455566655 677888888888877653
16309
16310
16311 No 400
16312 >1OYZ_A X-RAY STRUCTURE OF YB61_HAEIN NORTHEAST; STRUCTURAL GENOMICS, PSI, Protein Structure; 2.1A {Escherichia coli} SCOP: a.118.1.16
16313 Probab=80.56 E-value=0.11 Score=46.13 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=32.1 Template_Neff=12.700
16314
16315 Q NP_000290.2 549 IRTYLN-LMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
16316 Q Consensus 549 I~~LL~-LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
16317 ++.+.. ++. +.++.++..++.+|..+....+. .....++.+...+.+.++.++..++.+|..+.
16318 T Consensus 92 ~~~l~~~~l~-~~~~~vr~~a~~~l~~~~~~~~~----------~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~~~ 156 (280)
16319 T 1OYZ_A 92 FNILNNMALN-DKSACVRATAIESTAQRCKKNPI----------YSPKIVEQSQITAFDKSTNVRRATAFAISVIN 156 (280)
16320 T ss_dssp HHHHHHHHHH-CSCHHHHHHHHHHHHHHHHHCGG----------GHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC-
16321 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCcc----------cChhHHHHHHHHhcCCCHHHHHHHHHHHHhhc
16322 Confidence 344444 444 34556666666666665532110 11233445555555555666666666665544
16323
16324
16325 No 401
16326 >6GX7_F Tubulin alpha chain, Tubulin beta; microtubule, ALPHAREP, CELL CYCLE, COPN; HET: MES, PGE, SO4, GOL, GTP; 3.19A {Ovis aries}
16327 Probab=80.46 E-value=0.12 Score=44.09 Aligned_cols=122 Identities=14% Similarity=0.214 Sum_probs=55.9 Template_Neff=12.200
16328
16329 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
16330 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
16331 .++.+...+. +.++.++..++..+..+.. ...++.+..++.+.++.++..++.++..+...
16332 T Consensus 46 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~-- 106 (201)
16333 T 6GX7_F 46 AVEPLIKALK-DEDPWVRREAAGALGQIGD----------------ERAVEPLIKALKDEDRYVRRIAARALGKIGDE-- 106 (201)
16334 T ss_dssp GHHHHHHHTT-CSSHHHHHHHHHHHHHHTC----------------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTCG--
16335 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHCC----------------HHHHHHHHHHhcCCCHHHHHHHHHHHhhcCCh--
16336 Confidence 3444555554 2445555555555544321 11233344445555555666666666555421
16337
16338
16339 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
16340 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
16341 ..++.+...+.+ .++.++..++.++..+... ..++.+..++.+. +..++..++.+
16342 T Consensus 107 -------~~~~~l~~~l~~------~~~~v~~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a~~~ 161 (201)
16343 T 6GX7_F 107 -------RAVEPLIKALKD------EDWQVREDAAKALGQIGDE-----------RAVEPLIKALKDE-DTTVRLEAALA 161 (201)
16344 T ss_dssp -------GGHHHHHHHTTC------SSHHHHHHHHHHHHHHTCG-----------GGHHHHHHHTTCS-SHHHHHHHHHH
16345 T ss_pred -------hhHHHHHHHhhc------CCHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHhCC-CHHHHHHHHHH
16346 Confidence 122333333433 2345555555555554321 1233333444433 45555566666
16347
16348
16349 Q NP_000290.2 708 LSDMWS 713 (747)
16350 Q Consensus 708 LsnL~~ 713 (747)
16351 +..+..
16352 T Consensus 162 l~~~~~ 167 (201)
16353 T 6GX7_F 162 LGKIGG 167 (201)
16354 T ss_dssp HHHHCS
16355 T ss_pred HHhhcc
16356 Confidence 555543
16357
16358
16359 No 402
16360 >2NYL_A Protein phosphatase 2, regulatory subunit; HEAT repeat, HYDROLASE-HYDROLASE INHIBITOR COMPLEX; HET: DAL, MSE, ACB, 1ZN, DAM, FGA; 3.8A {Homo sapiens} SCOP: a.118.1.2
16361 Probab=80.40 E-value=0.11 Score=50.67 Aligned_cols=147 Identities=13% Similarity=0.119 Sum_probs=93.6 Template_Neff=13.500
16362
16363 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
16364 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
16365 ..++.+..++. +.++.++..++.++..+...... .. ....+++.+...+.+.++.++..++.++..+....
16366 T Consensus 158 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-------~~-~~~~~~~~l~~~~~~~~~~~r~~a~~~l~~l~~~~ 228 (582)
16367 T 2NYL_A 158 ELRQYFRNLCS-DDTPMVRRAAASKLGEFAKVLEL-------DN-VKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLL 228 (582)
16368 T ss_dssp HHHHHHHHHHS-CSCHHHHHHHHHHHHHHHTTSCH-------HH-CCCCCHHHHHHHTSCSCHHHHHHHHHHHHHHHHHS
16369 T ss_pred HHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHcCh-------hh-hHhhHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHC
16370 Confidence 35566667776 46778888899988888763221 11 12456677777777777888888988888887641
16371
16372
16373 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
16374 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
16375 ... .....+++.+...+.+ .++.++..++.++..+....+. .......++.+...+.+. ++.++..++.
16376 T Consensus 229 ~~~-~~~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~~~~~~~~---~~~~~~~~~~l~~~l~~~-~~~v~~~a~~ 297 (582)
16377 T 2NYL_A 229 PQE-DLEALVMPTLRQAAED------KSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDC-EAEVRAAASH 297 (582)
16378 T ss_dssp CHH-HHTTTTHHHHHHHHHC------SSHHHHHHHHHTHHHHHHHHCS---HHCCCCCHHHHHHHHTCS-SHHHHHHHHT
16379 T ss_pred CHH-HHHHHHHHHHHHHhcC------CCHHHHHHHHHhHHHHHHHHCC---CCCHhhhHHHHHHHhcCC-hHHHHHHHHH
16380 Confidence 111 1112345556666655 3677888888888888754221 111223566666666655 6778888888
16381
16382
16383 Q NP_000290.2 707 LLSDMWS 713 (747)
16384 Q Consensus 707 aLsnL~~ 713 (747)
16385 ++..+..
16386 T Consensus 298 ~l~~~~~ 304 (582)
16387 T 2NYL_A 298 KVKEFCE 304 (582)
16388 T ss_dssp THHHHHH
16389 T ss_pred HHHHHHH
16390 Confidence 8877765
16391
16392
16393 No 403
16394 >5VJC_B Protein mini spindles; TOG, HEAT Repeat, Tubulin, CELL; 2.0A {Drosophila melanogaster}
16395 Probab=80.32 E-value=0.12 Score=47.18 Aligned_cols=72 Identities=13% Similarity=0.027 Sum_probs=44.4 Template_Neff=11.500
16396
16397 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
16398 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
16399 .+.+.+...+. +.++.++..++..|..++..... ...... ..++..+...+.+.++.++..++.++..++..
16400 T Consensus 50 ~~~~~l~~~l~-~~~~~~r~~a~~~L~~~~~~~~~-----~~~~~~-~~l~~~l~~~l~d~~~~vr~~a~~~l~~l~~~ 121 (271)
16401 T 5VJC_B 50 NVNKALIANMF-HDDFRYHLKVIEQLSEDLAGNSK-----ALVCNL-DLILKWLTLRFYDTNPSVLIKGLEYLVQVFQV 121 (271)
16402 T ss_dssp TCCHHHHHHHT-CSCHHHHHHHHHHHHHHTTTCHH-----HHHHTH-HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
16403 T ss_pred cCCHHHHHhcc-CCCHHHHHHHHHHHHHHHhcCHH-----HHHHHH-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
16404 Confidence 34566777776 46777888888888888764321 011111 23344455555566777888888888877654
16405
16406
16407 No 404
16408 >6RXV_UJ Periodic tryptophan protein 2-like protein; ribosome, ribosome biogenesis, rRNA; HET: GTP; 4.0A {Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)}
16409 Probab=80.28 E-value=0.13 Score=62.13 Aligned_cols=152 Identities=9% Similarity=0.051 Sum_probs=86.0 Template_Neff=9.700
16410
16411 Q NP_000290.2 548 AIRTYLNLMGKS-----KKDATLEACAGALQNLTASKGLMSSGMSQ--LIGLKEKGLPQIARLLQSG--------NSDVV 612 (747)
16412 Q Consensus 548 ~I~~LL~LL~ss-----~d~eVr~~AL~aL~nLs~~s~~~s~~~~~--~llie~giI~~Ll~LL~s~--------d~eVr 612 (747)
16413 +++.++..+... .+..++..++.+|..++..... .... .. -..+++.|...+... ...++
16414 T Consensus 1625 il~~ll~~L~~~~~~~~~~~~v~~~al~~L~~l~~~~~~---~~~~~~~~--~~~il~~L~~~L~~~~~~~~~~~~~~v~ 1699 (1802)
16415 T 6RXV_UJ 1625 IVDASVKALKAVDFAVPEERNLWKRVLCTLAKCFEHDQD---GFWQAPAH--FGAVAPVLVEQFLRAEGQVTATNVNDVI 1699 (1802)
16416 T ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHhcCCC---CcccChhH--HHhHHHHHHHHHHhhcCCCCCccHHHHH
16417 Confidence 345555555521 2456777788888877764221 0000 11 134556666666532 23567
16418
16419
16420 Q NP_000290.2 613 RSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC 692 (747)
16421 Q Consensus 613 ~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL 692 (747)
16422 ..++.+++.++.......+. ..+++.++..+.+ .++.++..++.++..++.........+. ..+++.+...+
16423 T Consensus 1700 ~~ai~~L~~l~~~~~~~~~~-~~l~~~ll~~l~~------~~~~vR~~al~~L~~l~~~~g~~~~~~l-~eii~~L~elL 1771 (1802)
16424 T 6RXV_UJ 1700 QDVVPAVVELAAAVESQEHY-KEINTALLKHLRN------GSPGVRLAVVKCQQAITAKLGEDWLHLL-PEMLPYISELQ 1771 (1802)
16425 T ss_pred HHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHccC------CCHHHHHHHHHHHHHHHHHHCHhHHhhh-hHHHHHHHHHh
16426 Confidence 77888888877531111111 1234445555544 3567888999999988765332222222 24567777777
16427
16428
16429 Q NP_000290.2 693 RSSASPKAAEAARLLLSDMWS 713 (747)
16430 Q Consensus 693 ~s~~d~eVr~aAL~aLsnL~~ 713 (747)
16431 ++. ++.++..+..++..+..
16432 T Consensus 1772 eD~-d~~V~~~a~~~l~~l~~ 1791 (1802)
16433 T 6RXV_UJ 1772 DDD-DEVVERENRRWIVGIEE 1791 (1802)
16434 T ss_pred cCC-CHHHHHHHHHHHHHHHH
16435 Confidence 766 77788888777776654
16436
16437
16438 No 405
16439 >4I5L_D PP2A A alpha subunit (9-589); EF Hand, Phosphatase, CDC6 (Substrate); HET: FGA, ACB, DAL, MLI, PEG, 1ZN, MAA; 2.43A {Microcystis aeruginosa}
16440 Probab=80.24 E-value=0.11 Score=50.76 Aligned_cols=109 Identities=15% Similarity=0.189 Sum_probs=68.2 Template_Neff=13.400
16441
16442 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
16443 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
16444 ..++.+...+. +.++.++..++.++..+...... .. ....+++.+...+.+.++.++..++.++..+...
16445 T Consensus 238 ~~~~~l~~~l~-~~~~~vr~~~~~~l~~l~~~~~~-------~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~ 308 (584)
16446 T 4I5L_D 238 LVMPTLRQAAE-DKSWRVRYMVADKFTELQKAVGP-------EI-TKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENL 308 (584)
16447 T ss_dssp HTHHHHHHHHT-CSSHHHHHHHHHTHHHHHHHHHH-------HH-CCCCCHHHHHHHHTCSSHHHHHHHHTTHHHHHHTS
16448 T ss_pred HHHHHHHHHhh-CCCHHHHHHHHHHHHHHHHHHCC-------CC-ChhhHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhc
16449 Confidence 35566666776 46778888888888887754221 11 1245667777778777788899999999888764
16450
16451
16452 Q NP_000290.2 626 PLL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
16453 Q Consensus 626 ~e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
16454 ... . ......+++.+...+.+ .+..++..++.++..+..
16455 T Consensus 309 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~l~~ 349 (584)
16456 T 4I5L_D 309 SADCRENVIMSQILPCIKELVSD------ANQHVKSALASVIMGLSP 349 (584)
16457 T ss_dssp CTTTHHHHCCCCCHHHHHHHHTC------SCHHHHHHHHTTGGGGHH
16458 T ss_pred CccchhhHHHHhHHHHHHHHccC------CCHHHHHHHHHHHHHHHH
16459 Confidence 111 1 11123355555555554 245666777777766654
16460
16461
16462 No 406
16463 >1IBR_B RAN IMPORTIN BETA SUBUNIT; SMALL GTPASE NUCLEAR TRANSPORT; HET: GNP; 2.3A {Homo sapiens} SCOP: a.118.1.1
16464 Probab=80.23 E-value=0.12 Score=49.62 Aligned_cols=156 Identities=10% Similarity=0.042 Sum_probs=86.8 Template_Neff=12.900
16465
16466 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLM------------SSGMSQ----LIGLKEKGLPQIARLLQSG----- 607 (747)
16467 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~------------s~~~~~----~llie~giI~~Ll~LL~s~----- 607 (747)
16468 ++.+...+. +.++.++..++.++..++...... ...... .. .-..+++.+...+.+.
16469 T Consensus 261 ~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~ 338 (462)
16470 T 1IBR_B 261 FAITIEAMK-SDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKG-ALQYLVPILTQTLTKQDENDD 338 (462)
16471 T ss_dssp HHHHHHHHH-CSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHH-HHHHHHHHHHHHTTCCCSSCC
16472 T ss_pred HHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHhHHH-HHHHHHHHHHHhcccCCCCCC
16473 Confidence 555666666 356777778888888776531000 000000 00 0123344444444433
16474
16475
16476 Q NP_000290.2 608 --NSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSM 684 (747)
16477 Q Consensus 608 --d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~gi 684 (747)
16478 +..++..+..++..++..... .....+++.+...+.+ .++.++..++.++..++...+. ...... ..+
16479 T Consensus 339 ~~~~~~r~~a~~~l~~l~~~~~~--~~~~~~~~~l~~~l~~------~~~~~r~~al~~l~~l~~~~~~~~~~~~~-~~~ 409 (462)
16480 T 1IBR_B 339 DDDWNPCKAAGVCLMLLATCCED--DIVPHVLPFIKEHIKN------PDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQA 409 (462)
16481 T ss_dssp TTCCSHHHHHHHHHHHHHHHTTT--THHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHTSSSSCTTTTCTTT-TTH
16482 T ss_pred CCCCCHHHHHHHHHHHHHHhccC--ccHHhHHHHHHHhccC------CCHHHHHHHHHHHHHHHhCCCHHHHHHHH-HHH
16483 Confidence 445667777777777654111 0111234444455544 3677888999999988764332 111111 235
16484
16485
16486 Q NP_000290.2 685 LNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
16487 Q Consensus 685 L~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
16488 ++.+...+.+. ++.++..++.++..++....
16489 T Consensus 410 ~~~l~~~l~d~-~~~vr~~a~~~l~~l~~~~~ 440 (462)
16490 T 1IBR_B 410 MPTLIELMKDP-SVVVRDTAAWTVGRICELLP 440 (462)
16491 T ss_dssp HHHHHHGGGCS-CHHHHHHHHHHHHHHHHHGG
16492 T ss_pred HHHHHHHcCCC-CHHHHHHHHHHHHHHHHhCh
16493 Confidence 66677777665 78899999999998876443
16494
16495
16496 No 407
16497 >1B3U_A PROTEIN PHOSPHATASE PP2A, 65 KD; SCAFFOLD PROTEIN, PP2A, PHOSPHORYLATION, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.2
16498 Probab=80.14 E-value=0.12 Score=50.76 Aligned_cols=109 Identities=15% Similarity=0.181 Sum_probs=67.7 Template_Neff=13.400
16499
16500 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
16501 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
16502 ..++.+..++. +.++.++..++.++..+...... .. ....+++.+...+.+.++.++..++.++..+....
16503 T Consensus 242 ~~~~~l~~~l~-~~~~~~r~~~~~~l~~~~~~~~~-------~~-~~~~~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~ 312 (588)
16504 T 1B3U_A 242 LVMPTLRQAAE-DKSWRVRYMVADKFTELQKAVGP-------EI-TKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENL 312 (588)
16505 T ss_dssp HTHHHHHHHHT-CSSHHHHHHHHHTHHHHHHHHCH-------HH-CCCCCHHHHHHHHTCSSHHHHHHHHHHHHHHHHTS
16506 T ss_pred HHHHHHHHHHh-CCCHHHHHHHHhhHHHHHHHHCC-------CC-CHHhHHHHHHHHhccCHHHHHHHHHHHHHHHHHhC
16507 Confidence 35566666776 46777888888888888754221 11 12456677777777777888889999988887641
16508
16509
16510 Q NP_000290.2 627 -LL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
16511 Q Consensus 627 -e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
16512 .. . ......+++.+...+.+ .+..++..++.++..+..
16513 T Consensus 313 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~l~~ 353 (588)
16514 T 1B3U_A 313 SADCRENVIMSQILPCIKELVSD------ANQHVKSALASVIMGLSP 353 (588)
16515 T ss_dssp CTTTHHHHCCCCCHHHHHHHHTC------SCHHHHHHHHTTGGGGHH
16516 T ss_pred CcchhhhhhHHhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
16517 Confidence 11 1 11113345555555554 245666667777666654
16518
16519
16520 No 408
16521 >4P6Z_G BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
16522 Probab=80.03 E-value=0.13 Score=52.92 Aligned_cols=67 Identities=18% Similarity=0.165 Sum_probs=48.8 Template_Neff=12.000
16523
16524 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
16525 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
16526 +++.+..++. +.++.++..++.+|..+....+. . ...+++.|...+.+.++.++..++.++..++..
16527 T Consensus 152 ~~~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~ 218 (627)
16528 T 4P6Z_G 152 LAGEVEKLLK-TSNSYLRKKAALCAVHVIRKVPE--------L--MEMFLPATKNLLNEKNHGVLHTSVVLLTEMCER 218 (627)
16529 T ss_dssp HHHHHHHHHT-CSCHHHHHHHHHHHHHHHHHCSG--------G--GGGGHHHHTTCTTCCCHHHHHHHHHHHHHHHHH
16530 T ss_pred HHHHHHHHhh-CCCHHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
16531 Confidence 4666777777 46778888899999888764221 1 135677777888777888888898888888654
16532
16533
16534 No 409
16535 >5NR4_A CLIP-associating protein 2; Microtubules, TOG domain, Tubulin, Structural; 1.198A {Homo sapiens}
16536 Probab=79.96 E-value=0.12 Score=44.07 Aligned_cols=109 Identities=12% Similarity=0.062 Sum_probs=69.2 Template_Neff=12.900
16537
16538 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
16539 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
16540 ..+++.+...+.+.++.++..++.++..+........... ...+++.+...+.+.+..++..++.++..+......
16541 T Consensus 51 ~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~~--- 126 (230)
16542 T 5NR4_A 51 GKTVDALTGWVGSSNYRVSLMGLEILSAFVDRLSTRFKSY-VAMVIVALIDRMGDAKDKVRDEAQTLILKLMDQVAP--- 126 (230)
16543 T ss_dssp HHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHGGGGGGG-HHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHTSC---
16544 T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHcCCC---
16545 Confidence 3455666666666778888889999888876543221111 134566666666666677788888888777653210
16546
16547
16548 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
16549 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
16550 ...+++.+...+. +.++.++..++.++..++..
16551 T Consensus 127 ---~~~~~~~l~~~l~-~~~~~~r~~~~~~l~~l~~~ 159 (230)
16552 T 5NR4_A 127 ---PMYIWEQLASGFK-HKNFRSREGVCLCLIETLNI 159 (230)
16553 T ss_dssp ---HHHHHHHHGGGGG-CSCHHHHHHHHHHHHHHHHH
16554 T ss_pred ---HHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHH
16555 Confidence 1234555555665 45667888888888877753
16556
16557
16558 No 410
16559 >2P8Q_A Importin beta-1 subunit, Snurportin-1; HEAT repeat, IBB-domain, Importin, Karyopherin; 2.35A {Homo sapiens} SCOP: a.118.1.1
16560 Probab=79.89 E-value=0.12 Score=54.05 Aligned_cols=154 Identities=11% Similarity=0.064 Sum_probs=92.1 Template_Neff=13.100
16561
16562 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
16563 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
16564 .++.|...+. +.+ +.++..++.+|..++..... . .... ....+++.+...+.+.+ +.++..++.++..++
16565 T Consensus 129 l~~~l~~~l~-~~~~~~~~~~~~~~~l~~l~~~~~~---~-~~~~-~~~~l~~~l~~~l~~~~~~~~vr~~a~~~l~~l~ 202 (876)
16566 T 2P8Q_A 129 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (876)
16567 T ss_dssp HHHHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHSCT---T-SSST-THHHHHHHHHHHHCTTCSCHHHHHHHHHHHHHHG
16568 T ss_pred HHHHHHHHhh-CCCCCHHHHHHHHHHHHHHHHhcCH---H-HHHH-HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
16569 Confidence 4566666666 344 56777888888877754221 0 0011 12456677777777665 788888999998887
16570
16571
16572 Q NP_000290.2 624 RH-PLL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
16573 Q Consensus 624 ~~-~e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
16574 .. ... . ......+++.+...+.+ .++.++..++.+|..+...............+++.+...+.+. ++.+
16575 T Consensus 203 ~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~-~~~v 275 (876)
16576 T 2P8Q_A 203 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 275 (876)
16577 T ss_dssp GGCHHHHTCHHHHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHCGGGTHHHCCCCCHHHHHHHHTCS-SHHH
16578 T ss_pred HHchhhccCHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhcHHHHHHhhhHHHHHHHHHHhcCC-hHHH
16579 Confidence 64 111 1 11122344455555544 3567888899999888764332222112223566666667655 6778
16580
16581
16582 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
16583 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
16584 +..++.++..+...
16585 T Consensus 276 ~~~a~~~l~~l~~~ 289 (876)
16586 T 2P8Q_A 276 ALQGIEFWSNVCDE 289 (876)
16587 T ss_dssp HHHHHHHHHHHHHH
16588 T ss_pred HHHHHHHHHHHHHH
16589 Confidence 88888888777653
16590
16591
16592 No 411
16593 >4I5L_D PP2A A alpha subunit (9-589); EF Hand, Phosphatase, CDC6 (Substrate); HET: FGA, ACB, DAL, MLI, PEG, 1ZN, MAA; 2.43A {Microcystis aeruginosa}
16594 Probab=79.88 E-value=0.12 Score=50.59 Aligned_cols=147 Identities=14% Similarity=0.094 Sum_probs=80.2 Template_Neff=13.400
16595
16596 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
16597 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
16598 .+++.+...+. +.++.++..++.++..+...... .. .....++.+...+.+.++.++..++.++..+....
16599 T Consensus 320 ~~~~~l~~~l~-~~~~~vr~~~~~~l~~l~~~~~~------~~--~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~ 390 (584)
16600 T 4I5L_D 320 QILPCIKELVS-DANQHVKSALASVIMGLSPILGK------DN--TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVI 390 (584)
16601 T ss_dssp CCHHHHHHHHT-CSCHHHHHHHHTTGGGGHHHHHH------HH--CCCCCHHHHHHHHTCSCHHHHHHHHTCCHHHHHHS
16602 T ss_pred hHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHhCC------cc--hHHHHHHHHHHHhcCCCHHHHHHHHHcHHHHHHHc
16603 Confidence 45666666776 35667777888888777653211 11 12345666677777777778888888887776541
16604
16605
16606 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
16607 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
16608 .... ....+++.+...+.+ .+..++..++.++..+....+. ......+++.+..++.+. ++.++..++.
16609 T Consensus 391 ~~~~-~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~ 459 (584)
16610 T 4I5L_D 391 GIRQ-LSQSLLPAIVELAED------AKWRVRLAIIEYMPLLAGQLGV---EFFDEKLNSLCMAWLVDH-VYAIREAATS 459 (584)
16611 T ss_dssp CHHH-HHHHHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHHCH---HHCCCCCHHHHHHHTTCS-SHHHHHHHHH
16612 T ss_pred ChHH-HHHhHHHHHHHHHHh------CCHHHHHHHHHHHHHHHHhcCh---HHhHHHHHHHHHHHHcCC-HHHHHHHHHH
16613 Confidence 1111 112244445555544 2456666677777666543111 111112344444555444 5556666666
16614
16615
16616 Q NP_000290.2 707 LLSDMWS 713 (747)
16617 Q Consensus 707 aLsnL~~ 713 (747)
16618 +|..+..
16619 T Consensus 460 ~l~~l~~ 466 (584)
16620 T 4I5L_D 460 NLKKLVE 466 (584)
16621 T ss_dssp HHHHHHH
16622 T ss_pred HHHHHHH
16623 Confidence 6666554
16624
16625
16626 No 412
16627 >1QGR_A IMPORTIN BETA SUBUNIT, IMPORTIN ALPHA-2; TRANSPORT RECEPTOR, NUCLEAR IMPORT, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.1
16628 Probab=79.85 E-value=0.12 Score=54.15 Aligned_cols=154 Identities=11% Similarity=0.065 Sum_probs=92.3 Template_Neff=13.000
16629
16630 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
16631 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
16632 .++.|...+. +.+ +.++..++.+|..++..... . .... ....+++.+...+.+.+ +.++..++.+|..++
16633 T Consensus 129 ~~~~l~~~l~-~~~~~~~~~~~~l~~l~~l~~~~~~---~-~~~~-~~~~l~~~l~~~l~~~~~~~~vr~~a~~~l~~l~ 202 (876)
16634 T 1QGR_A 129 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (876)
16635 T ss_pred HHHHHHHHHc-CCCCCHHHHHHHHHHHHHHHhhCCH---H-HHHH-HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
16636 Confidence 4556666666 344 56777888888877754221 0 0111 12356677777777655 788888999998887
16637
16638
16639 Q NP_000290.2 624 RHP-LL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
16640 Q Consensus 624 ~~~-e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
16641 ... .. . ......+++.+...+.+ .++.++..++.+|..++..............+++.+...+.+. ++.+
16642 T Consensus 203 ~~~~~~~~~~~~~~~i~~~l~~~~~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~l~~~l~~~-~~~v 275 (876)
16643 T 1QGR_A 203 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 275 (876)
16644 T ss_pred hhCCcccCChHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhCHHHhhHhhHHhHHHHHHHHhCCC-CHHH
16645 Confidence 652 11 1 11122344455555544 3577888899999888765332222111223566666667655 6778
16646
16647
16648 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
16649 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
16650 +..++.++..++..
16651 T Consensus 276 ~~~a~~~l~~l~~~ 289 (876)
16652 T 1QGR_A 276 ALQGIEFWSNVCDE 289 (876)
16653 T ss_pred HHHHHHHHHHHHHH
16654 Confidence 88888888777654
16655
16656
16657 No 413
16658 >1B3U_A PROTEIN PHOSPHATASE PP2A, 65 KD; SCAFFOLD PROTEIN, PP2A, PHOSPHORYLATION, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.2
16659 Probab=79.78 E-value=0.12 Score=50.60 Aligned_cols=146 Identities=14% Similarity=0.095 Sum_probs=76.6 Template_Neff=13.400
16660
16661 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
16662 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
16663 .+++.+...+. +.++.++..++.++..+...... . . .....++.+...+.+.++.++..++.++..+....
16664 T Consensus 324 ~~~~~l~~~l~-~~~~~vr~~~~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~ 394 (588)
16665 T 1B3U_A 324 QILPCIKELVS-DANQHVKSALASVIMGLSPILGK------D-N-TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVI 394 (588)
16666 T ss_dssp CCHHHHHHHHT-CSCHHHHHHHHTTGGGGHHHHCH------H-H-CCCCCHHHHHHHHTCSCHHHHHHHHTTCHHHHHHS
16667 T ss_pred hHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHCc------c-c-hHHhHHHHHHHHhcCCCHHHHHHHHhchHHHHHhc
16668 Confidence 45566666676 35667777888888777653211 1 1 11345666677777777778888888887776541
16669
16670
16671 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
16672 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
16673 .... ....+++.+...+.+ .+..++..++.++..+....+. ......+++.+..++.+. +..++..++.
16674 T Consensus 395 ~~~~-~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~ 463 (588)
16675 T 1B3U_A 395 GIRQ-LSQSLLPAIVELAED------AKWRVRLAIIEYMPLLAGQLGV---EFFDEKLNSLCMAWLVDH-VYAIREAATS 463 (588)
16676 T ss_dssp CHHH-HHHHHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHHCG---GGCCHHHHHHHHHGGGCS-SHHHHHHHHH
16677 T ss_pred CHHH-HHHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHhcCh---HHhHHHHHHHHHHHhcCC-hHHHHHHHHH
16678 Confidence 1111 111234444444444 2455666666666666542111 111112333444444433 4455555555
16679
16680
16681 Q NP_000290.2 707 LLSDMW 712 (747)
16682 Q Consensus 707 aLsnL~ 712 (747)
16683 +|..+.
16684 T Consensus 464 ~l~~l~ 469 (588)
16685 T 1B3U_A 464 NLKKLV 469 (588)
16686 T ss_dssp HHHHHH
16687 T ss_pred HHHHHH
16688 Confidence 555544
16689
16690
16691 No 414
16692 >6MZE_Z Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: MG, GTP, GDP; 3.6A {Sus scrofa}
16693 Probab=79.70 E-value=0.13 Score=50.52 Aligned_cols=152 Identities=11% Similarity=0.094 Sum_probs=94.5 Template_Neff=12.900
16694
16695 Q NP_000290.2 550 RTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIAR-LLQSGNSDVVRSGASLLSNMSRHPLL 628 (747)
16696 Q Consensus 550 ~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~-LL~s~d~eVr~~AL~aLsnLa~~~e~ 628 (747)
16697 +.+...+. +.++.++..++.+|..++..... ........ ....+++.|+. ++.+.++.++..++.+|..+......
16698 T Consensus 57 ~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-~~~~~~~~-~~~~~l~~l~~~~~~~~~~~vr~~a~~~l~~l~~~~~~ 133 (536)
16699 T 6MZE_Z 57 ELFASYIV-DSNVVAQENAIIALHTLLEYISQ-VPNVSTSK-LRLQWIPPLVEKGLSSSRAATKAKATDCIMLLTQSDTS 133 (536)
16700 T ss_dssp HHHHHHHS-CSSHHHHHHHHHHHHHHHHHTSS-SCCTTHHH-HHHHHHHHHCCCCCSCSCHHHHHHHHHHHHHHHHHSSS
16701 T ss_pred HHHHHHhc-CchHHHHHHHHHHHHHHHHHhcc-CCCCCcHH-HHHhhHHHHHHhhccCCCHHHHHHHHHHHHHHhccCcc
16702 Confidence 55666676 47788899999999888754211 00000011 12345666776 56667788899999999888764111
16703
16704
16705 Q NP_000290.2 629 HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK---QYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
16706 Q Consensus 629 ~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~---~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
16707 ...+++.+...+.+ .++.++..++.+|..++........ ......+++.+...+.+. ++.++..++
16708 T Consensus 134 ----~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a~ 202 (536)
16709 T 6MZE_Z 134 ----IQQTVNLMLPSLSN------KLPRLVSSCVKCLATIIEEFGFINVSDINILLSEILEPLPKLSSHA-DRNVRSETM 202 (536)
16710 T ss_dssp ----SHHHHHHHSGGGGC------SCHHHHHHHHHHHHHHHHTTCSCSCTTHHHHHHHHHTTHHHHHTCS-SHHHHHHHH
16711 T ss_pred ----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhCCCcccccccchHHHHHHHHHHhcCC-CHHHHHHHH
16712 Confidence 11244555555554 3678888899999888764222110 001234567777777766 788999999
16713
16714
16715 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
16716 Q Consensus 706 ~aLsnL~~~~ 715 (747)
16717 .++..+....
16718 T Consensus 203 ~~l~~l~~~~ 212 (536)
16719 T 6MZE_Z 203 NLILQIYKWF 212 (536)
16720 T ss_dssp HHHHHHHHHH
16721 T ss_pred HHHHHHHHHH
16722 Confidence 9988887543
16723
16724
16725 No 415
16726 >5F0N_A cohesin subunit Pds5, KLTH0D07062p; heat repeat cohesin subunit, cell; 3.2A {Lachancea thermotolerans}
16727 Probab=79.14 E-value=0.17 Score=59.20 Aligned_cols=150 Identities=8% Similarity=0.095 Sum_probs=100.7 Template_Neff=8.200
16728
16729 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
16730 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
16731 .+++.|...|. +++..+|..|+.+|+.+....+. .. ... .....++.++..+.+.++.++..++.++..+....
16732 T Consensus 271 ~vlp~L~~~L~-~~d~~vR~~Av~~Lg~l~~~~~~--~~-l~~--~~~~l~~~ll~rl~D~~~~VR~~av~~L~~i~~~~ 344 (1175)
16733 T 5F0N_A 271 SVTGLLYQLLC-SDNELFRESATKCVSKMLGTHSL--IN-FAV--AHSDTYKIWLSKMADISPHVRQAWVSEIPSILMSR 344 (1175)
16734 T ss_dssp GGHHHHHHHTT-CSSHHHHHHHHHHHHHHHTSCCS--SC-HHH--HTHHHHHHHHGGGSCSCHHHHHHHHTTHHHHHHHC
16735 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHccccc--cc-HHH--HcHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcC
16736 Confidence 36777888887 47788999999999988753210 00 011 12346667777788888999999999999887641
16737
16738
16739 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
16740 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
16741 .. ....+++.|...+.+ .++.++..++.+|..+..... .........++.|...+.+. ++.+|..|+.
16742 T Consensus 345 ~~---l~~~ii~~L~~~L~D------~d~~VR~~av~~L~~l~~~~~--~~~~~~~~ll~~L~~~l~D~-~~~VR~~A~~ 412 (1175)
16743 T 5F0N_A 345 SD---LSDDISKGLAKALID------SDHTVRLSAIQTFHEVPVKRL--WECLPNAAVFAGLVHLTRET-RRDLRDECID 412 (1175)
16744 T ss_dssp SS---CHHHHHHHHHHHHTC------SSHHHHHHHHGGGTSSCHHHH--HHHCCCHHHHHHHHTTTTCC-SHHHHHHHHH
16745 T ss_pred hh---hHHHHHHHHHHHhCC------CCHHHHHHHHHHHHhhhhhhh--hhcCCchHHHHHHHHHHhcC-CHHHHHHHHH
16746 Confidence 11 112355666666766 378899999999988764311 01111134567777777776 7889999999
16747
16748
16749 Q NP_000290.2 707 LLSDMWSS 714 (747)
16750 Q Consensus 707 aLsnL~~~ 714 (747)
16751 +|+.+...
16752 T Consensus 413 aL~~l~~~ 420 (1175)
16753 T 5F0N_A 413 AVARIYTE 420 (1175)
16754 T ss_dssp HHHHHHHH
16755 T ss_pred HHHHHHHH
16756 Confidence 98887754
16757
16758
16759 No 416
16760 >4NEE_G AP-2 complex subunit sigma, AP-2; clathrin Adaptor AP-2, HIV-1 Nef; 2.8841A {Rattus norvegicus}
16761 Probab=78.80 E-value=0.15 Score=48.94 Aligned_cols=115 Identities=12% Similarity=0.097 Sum_probs=71.6 Template_Neff=12.000
16762
16763 Q NP_000290.2 548 AIRTYLNLM--GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
16764 Q Consensus 548 ~I~~LL~LL--~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
16765 .++.+..++ . +.++.++..++.+|..+....+. .+....+++.|...+.+.++.++..++.+|..+...
16766 T Consensus 149 ~~~~l~~~l~~~-~~~~~vr~~a~~~L~~l~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 219 (398)
16767 T 4NEE_G 149 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRTSPD--------LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 219 (398)
16768 T ss_dssp HTTHHHHHHHCS-SSCHHHHHHHHHHHHHHHHHCGG--------GSCCSSHHHHHHGGGGCSCHHHHHHHHHHHHHHHHH
16769 T ss_pred HHHhHHHHHhcC-CCCHHHHHHHHHHHHHHHHHChh--------hccccchHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
16770 Confidence 455666777 6 46778888999999988764221 111245677788888777888999999999988865
16771
16772
16773 Q NP_000290.2 626 PL-LHRVMGNQVFPEVTRLLTSHTG-------NTSNSEDILSSACYTVRNLMAS 671 (747)
16774 Q Consensus 626 ~e-~~~ll~~giI~~Ll~LL~s~s~-------~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
16775 .. ........+++.+..++.+... ....++.++..++.+|..+...
16776 T Consensus 220 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 273 (398)
16777 T 4NEE_G 220 NPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPP 273 (398)
16778 T ss_dssp CGGGGTHHHHHHHHHHHHHHHCCTTTTGGGEETTEESHHHHHHHHHHHTTSCSC
16779 T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCcCcccccccCCCCHHHHHHHHHHHHhCCCC
16780 Confidence 21 1111112345555555543000 0001456777888888887754
16781
16782
16783 No 417
16784 >3W3U_A Importin subunit beta-3; HEAT repeat, nuclear import, PROTEIN; 2.6A {Saccharomyces cerevisiae}
16785 Probab=78.75 E-value=0.14 Score=55.16 Aligned_cols=158 Identities=8% Similarity=0.034 Sum_probs=93.7 Template_Neff=13.000
16786
16787 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
16788 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
16789 .++.+...+. +.++.++..++.++..++..... ..... ...+++.|...+.+.++.++..++.+|+.++....
16790 T Consensus 849 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 921 (1078)
16791 T 3W3U_A 849 IWPMINTFLL-DNEPILVIFALVVIGDLIQYGGE-----QTASM-KNAFIPKVTECLISPDARIRQAASYIIGVCAQYAP 921 (1078)
16792 T ss_dssp GHHHHHHHHT-SSCHHHHHHHHHHHHHHHHHHGG-----GCHHH-HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHSC
16793 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhcch-----hhHHH-HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHCc
16794 Confidence 3444555555 35667777888888887754221 01111 23567777888888888999999999999887621
16795
16796
16797 Q NP_000290.2 628 -LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
16798 Q Consensus 628 -~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
16799 ........+++.|...+.........+..++..++.+|..+....+.... ....+++.++..+....++.++..++.
16800 T Consensus 922 ~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~ 999 (1078)
16801 T 3W3U_A 922 STYADVCIPTLDTLVQIVDFPGSKLEENRSSTENASAAIAKILYAYNSNIP--NVDTYTANWFKTLPTITDKEAASFNYQ 999 (1078)
16802 T ss_dssp TTTHHHHHHHHHHHHHHTC-CCTTSHHHHHHHHHHHHHHHHHHHHC--------CCHHHHHHHTTCCCCSCHHHHHHHHH
16803 T ss_pred cccHHhHHHHHHHHHHHHhCCCcccccccchHHHHHHHHHHHHHHcccCCC--ChhHHHHHHHHhCCcCCCHHHHHHHHH
16804 Confidence 11111134566666666510000003678899999999998875332211 122456666666632226677888888
16805
16806
16807 Q NP_000290.2 707 LLSDMWSS 714 (747)
16808 Q Consensus 707 aLsnL~~~ 714 (747)
16809 +|..++..
16810 T Consensus 1000 ~l~~l~~~ 1007 (1078)
16811 T 3W3U_A 1000 FLSQLIEN 1007 (1078)
16812 T ss_dssp HHHHHHHT
16813 T ss_pred HHHHHHHc
16814 Confidence 88877754
16815
16816
16817 No 418
16818 >4NEE_B AP-2 complex subunit sigma, AP-2; clathrin Adaptor AP-2, HIV-1 Nef; 2.8841A {Rattus norvegicus}
16819 Probab=78.75 E-value=0.15 Score=49.03 Aligned_cols=115 Identities=12% Similarity=0.097 Sum_probs=71.5 Template_Neff=11.900
16820
16821 Q NP_000290.2 548 AIRTYLNLM--GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
16822 Q Consensus 548 ~I~~LL~LL--~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
16823 .++.+..++ . +.++.++..++.+|..+....+. .+....+++.|...+.+.++.++..++.+|..+...
16824 T Consensus 149 ~~~~l~~~l~~~-~~~~~vr~~a~~~L~~l~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 219 (398)
16825 T 4NEE_B 149 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRTSPD--------LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 219 (398)
16826 T ss_pred HHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHChh--------HhcHhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
16827 Confidence 455666777 6 46778888999999988764221 111245677788888777888999999999988865
16828
16829
16830 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTG-------NTSNSEDILSSACYTVRNLMAS 671 (747)
16831 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~-------~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
16832 ... .......+++.+..++.+... ....++.++..++.+|..+...
16833 T Consensus 220 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 273 (398)
16834 T 4NEE_B 220 NPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPP 273 (398)
16835 T ss_pred CHHHhHHHHHHHHHHHHHHHcCCCCCCccccccCCCCHHHHHHHHHHHHhhccC
16836 Confidence 211 111112345555555543000 0001456777888888887754
16837
16838
16839 No 419
16840 >3DAD_A FH1/FH2 domain-containing protein 1; Formin, FHOD1, GTPase-binding domain, ubiquitin-superfold; 2.3A {Homo sapiens}
16841 Probab=78.49 E-value=0.18 Score=50.49 Aligned_cols=154 Identities=13% Similarity=0.081 Sum_probs=94.1 Template_Neff=8.200
16842
16843 Q NP_000290.2 565 LEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVM-GNQVFPEVTR 642 (747)
16844 Q Consensus 565 r~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll-~~giI~~Ll~ 642 (747)
16845 ...++..|..++..... ....|++.+++..|+.++...+......++.+|..|...... ..++ ....+..|..
16846 T Consensus 135 l~~~L~~L~~~l~~d~~-----wv~eFi~~~Gl~~L~~~l~~~~~~~~~~~L~cl~~Lm~~~~G~~~v~~~~~~i~~l~~ 209 (339)
16847 T 3DAD_A 135 LRRSLFSLKQIFQEDKD-----LVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYT 209 (339)
16848 T ss_dssp HHHHHHHHHHHHHTCTT-----HHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHH
16849 T ss_pred HHHHHHHHHHHHhCCcc-----HHHHHHHCCHHHHHHHHHHHccHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHH
16850 Confidence 34566666666521121 345557788999999999876666777888888888776222 2222 2346677777
16851
16852
16853 Q NP_000290.2 643 LLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFS----------SSMLNNIINLCRSS--ASPKAAEAARLLLSD 710 (747)
16854 Q Consensus 643 LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve----------~giL~~Ll~LL~s~--~d~eVr~aAL~aLsn 710 (747)
16855 .+.+ ....++..++.+|..++...+.....+.+ ...+..++..+... .+.+++..++.++..
16856 T Consensus 210 ~l~s------~~~~v~~~al~iL~~l~~~~~~g~~~Vl~al~~~~~~~~~~~f~~lv~~L~~~~~~d~e~~~~~L~LINa 283 (339)
16857 T 3DAD_A 210 LCAS------LSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTLINK 283 (339)
16858 T ss_dssp GGGC------SCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHHHHHHH
16859 T ss_pred HhcC------CCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHhHHHhhCCCCHHHHHHHHHhhCCCCHHHHHHHHHHHHH
16860 Confidence 7765 35678888888888887654333222222 23466677777642 156677777777777
16861
16862
16863 Q NP_000290.2 711 MWSSKE-------LQGVLRQQGFDRN 729 (747)
16864 Q Consensus 711 L~~~~~-------~~~~~~~~~~~~~ 729 (747)
16865 |+.... +..-|.+.|+..-
16866 T Consensus 284 Ll~~~~d~~~R~~lr~~L~~~Gi~~i 309 (339)
16867 T 3DAD_A 284 TLAALPDQDSFYDVTDALEQQGMEAL 309 (339)
16868 T ss_dssp HHHHCSSHHHHHHHHHHHHHTTHHHH
16869 T ss_pred HHHcCCCHHHHHHHHHHHHHCChHHH
16870 Confidence 664433 3344555665443
16871
16872
16873 No 420
16874 >5VJC_A Protein mini spindles; TOG, HEAT Repeat, Tubulin, CELL; 2.0A {Drosophila melanogaster}
16875 Probab=78.36 E-value=0.16 Score=46.47 Aligned_cols=73 Identities=11% Similarity=0.004 Sum_probs=44.8 Template_Neff=11.400
16876
16877 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
16878 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
16879 ....+.+...+. +.++.++..++..|..++..... ..... -..++..+...+.+.++.++..++.++..++..
16880 T Consensus 49 ~~~~~~l~~~l~-~~~~~~r~~a~~~L~~~~~~~~~-----~~~~~-~~~l~~~l~~~l~d~~~~v~~~a~~~l~~l~~~ 121 (271)
16881 T 5VJC_A 49 ANVNKALIANMF-HDDFRYHLKVIEQLSEDLAGNSK-----ALVCN-LDLILKWLTLRFYDTNPSVLIKGLEYLVQVFQV 121 (271)
16882 T ss_dssp TTCCHHHHHHHT-CSSHHHHHHHHHHHHHHTTTCHH-----HHHHT-HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHH
16883 T ss_pred hcCCHHHHHhcc-CCCHHHHHHHHHHHHHHHhcChH-----HHHHH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
16884 Confidence 334566777776 46778888888888888764321 01111 123344444555566777888888888877654
16885
16886
16887 No 421
16888 >5WBJ_A Regulatory-associated protein of TOR 1,Eukaryotic; Raptor, TOS, PROTEIN BINDING; 3.0A {Arabidopsis thaliana}
16889 Probab=78.29 E-value=0.18 Score=59.27 Aligned_cols=156 Identities=10% Similarity=0.095 Sum_probs=112.5 Template_Neff=8.700
16890
16891 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
16892 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
16893 .++.+++.|.+ +..+..|+..|..++..... ....+...++++.++.+|.+..++++..++.++++++.. +
16894 T Consensus 467 qLp~~lq~L~s---~~~r~rAL~~L~~~ld~~~~-----~~~~~~~~gi~p~ll~lL~s~~~~lr~~a~~i~a~i~~~d~ 538 (1287)
16895 T 5WBJ_A 467 QLPIVLQVLLS---QCHRFRALVLLGRFLDMGSW-----AVDLALSVGIFPYVLKLLQTTTNELRQILVFIWTKILALDK 538 (1287)
16896 T ss_dssp CHHHHHHHTTS---STTHHHHHHHHHHHHTTCHH-----HHHHHHHHTCHHHHHHGGGCCCHHHHHHHHHHHHHHHHHCG
16897 T ss_pred HHHHHHHHHcC---HHHHHHHHHHHHHHHhcCHH-----HHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHccCH
16898 Confidence 46666777752 23677899999998874332 234445679999999999988889999999999999876 3
16899
16900
16901 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR-------SSASP 698 (747)
16902 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~-------s~~d~ 698 (747)
16903 .. ..++..+.+..|+.+|.... ..+.++..++.+|+.++...+.....+...+++..+...+. +. ++
16904 T Consensus 539 ~~q~~l~~~~~l~~ll~~L~~~~----~~~~~r~~a~~~Ls~l~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~-~~ 613 (1287)
16905 T 5WBJ_A 539 SCQIDLVKDGGHTYFIRFLDSSG----AFPEQRAMAAFVLAVIVDGHRRGQEACLEANLIGVCLGHLEASRPSDPQP-EP 613 (1287)
16906 T ss_dssp GGHHHHHHTTCHHHHHHHHHCSS----CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHCC----------CH
16907 T ss_pred HHHHHHHHcCCeeeEEEeecCCC----CCHHHHHHHHHHHHHHHcCCHhHHHHHHHCcHHHHHHHHHHhcCCCCCCC-CH
16908 Confidence 33 34455667888888886420 23556778899999998765555555555577788877776 34 67
16909
16910
16911 Q NP_000290.2 699 KAAEAARLLLSDMWSSKE 716 (747)
16912 Q Consensus 699 eVr~aAL~aLsnL~~~~~ 716 (747)
16913 .++..++.+|..|+...+
16914 T Consensus 614 ~lr~~a~~~L~~L~~~~~ 631 (1287)
16915 T 5WBJ_A 614 LFLQWLCLCLGKLWEDFM 631 (1287)
16916 T ss_dssp HHHHHHHHHHHHHHTTCH
16917 T ss_pred HHHHHHHHHHHHHHhccH
16918 Confidence 889999999999986654
16919
16920
16921 No 422
16922 >5WBK_A Regulatory-associated protein of TOR 1,Ribosomal; Raptor, TOS, PROTEIN BINDING; 3.11A {Arabidopsis thaliana}
16923 Probab=78.26 E-value=0.18 Score=59.26 Aligned_cols=156 Identities=10% Similarity=0.095 Sum_probs=112.8 Template_Neff=8.700
16924
16925 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
16926 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
16927 .++.+++.|.+ +..+..|+..|..++..... ....+...++++.|+.+|.+..++++..++.++++++.. +
16928 T Consensus 467 ~Lp~~lq~L~s---~~~r~rAL~~L~~~ld~~~~-----a~~~~l~~Gi~p~ll~lL~s~~~~lr~~a~~i~a~i~~~d~ 538 (1287)
16929 T 5WBK_A 467 QLPIVLQVLLS---QCHRFRALVLLGRFLDMGSW-----AVDLALSVGIFPYVLKLLQTTTNELRQILVFIWTKILALDK 538 (1287)
16930 T ss_dssp SHHHHHHHHTS---GGGHHHHHHHHHHHHTTCHH-----HHHHHHHHTCHHHHHHGGGCCCHHHHHHHHHHHHHHHHHCG
16931 T ss_pred HHHHHHHHHcC---HHHHHHHHHHHHHHHhcCHH-----HHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHccCH
16932 Confidence 46666777752 23677899999998874332 233445679999999999988889999999999999876 3
16933
16934
16935 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR-------SSASP 698 (747)
16936 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~-------s~~d~ 698 (747)
16937 .. ..++..+.+..|+.+|.... ..+.++..++.+|+.++...+.....+.+.+++..+...|. +. ++
16938 T Consensus 539 ~~q~~l~~~~~l~~ll~~L~~~~----~~~~~r~~a~~~Ls~l~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~-~~ 613 (1287)
16939 T 5WBK_A 539 SCQIDLVKDGGHTYFIRFLDSSG----AFPEQRAMAAFVLAVIVDGHRRGQEACLEANLIGVCLGHLEASRPSDPQP-EP 613 (1287)
16940 T ss_dssp GGHHHHHHTTTHHHHHHHHHSSC----CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHCC----------CH
16941 T ss_pred HHHHHHHHcCCeeeEEEeecCCC----CCHHHHHHHHHHHHHHHcCCHhHHHHHHHCcHHHHHHHHHHhcCCCCCCC-CH
16942 Confidence 33 34455667788888886420 23556778889999998765555555555577888877776 34 68
16943
16944
16945 Q NP_000290.2 699 KAAEAARLLLSDMWSSKE 716 (747)
16946 Q Consensus 699 eVr~aAL~aLsnL~~~~~ 716 (747)
16947 .++..++.+|..|+....
16948 T Consensus 614 ~lr~~a~~~L~~L~~~~~ 631 (1287)
16949 T 5WBK_A 614 LFLQWLCLCLGKLWEDFM 631 (1287)
16950 T ss_dssp HHHHHHHHHHHHHHTTCH
16951 T ss_pred HHHHHHHHHHHHHHcccH
16952 Confidence 889999999999986654
16953
16954
16955 No 423
16956 >6EN4_C Splicing factor 3B subunit 3; Protein complex, splicing modulator, SPLICING; HET: BGZ; 3.08A {Homo sapiens}
16957 Probab=78.21 E-value=0.15 Score=53.32 Aligned_cols=154 Identities=10% Similarity=0.027 Sum_probs=92.8 Template_Neff=12.900
16958
16959 Q NP_000290.2 548 AIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
16960 Q Consensus 548 ~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
16961 .++.+...+.+ .+ +.++..++.+|..+....+. .... .-..+++.+...+.+.++.++..++.++..+....
16962 T Consensus 192 ~~~~l~~~l~~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~ 264 (852)
16963 T 6EN4_C 192 LLPFLKAVCKS-KKSWQARHTGIKIVQQIAILMGC-----AILP-HLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAA 264 (852)
16964 T ss_pred HHHHHHHHHcC-CCCHHHHHHHHHHHHHHHhhCch-----hhcc-cHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHcC
16965 Confidence 34445555552 33 67888888888888754321 1111 12345677777777778889999999998887652
16966
16967
16968 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
16969 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
16970 .. .......+++.+...+.+ ....++..++.+|..++...+..........+++.+...+.+. ++.++..++
16971 T Consensus 265 ~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a~ 337 (852)
16972 T 6EN4_C 265 TPYGIESFDSVLKPLWKGIRQ------HRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP-DEEMKKIVL 337 (852)
16973 T ss_pred CHHHHHHHHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHhcCC-CHHHHHHHH
16974 Confidence 11 111112345666666654 2456777888888887764222111111124566666666655 677888888
16975
16976
16977 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
16978 Q Consensus 706 ~aLsnL~~~~ 715 (747)
16979 .++..++...
16980 T Consensus 338 ~~l~~l~~~~ 347 (852)
16981 T 6EN4_C 338 KVVKQCCGTD 347 (852)
16982 T ss_pred HHHHHHhhcC
16983 Confidence 8888877543
16984
16985
16986 No 424
16987 >5F0O_A cohesin subunit Pds5, KLTH0D07062p, KLTH0G16610p; heat repeat cohesin subunit, cell; 3.5A {Lachancea thermotolerans}
16988 Probab=78.20 E-value=0.18 Score=58.49 Aligned_cols=150 Identities=8% Similarity=0.096 Sum_probs=99.5 Template_Neff=8.400
16989
16990 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
16991 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
16992 .+++.|...|. +.++.+|..|+.+|+.+...... .. .... ....++.++..+.+.++.++..++.++..+....
16993 T Consensus 280 ~vlp~L~~~L~-~~d~~vR~~Av~~Lg~l~~~~~~--~~-l~~~--~~~l~~~ll~rl~D~~~~VR~~av~~l~~i~~~~ 353 (1133)
16994 T 5F0O_A 280 SVTGLLYQLLC-SDNELFRESATKCVSKMLGTHSL--IN-FAVA--HSDTYKIWLSKMADISPHVRQAWVSEIPSILMSR 353 (1133)
16995 T ss_dssp TSTTTTTTTTS-CSSHHHHHHHHHHHHHHHHSCCS--ST-TTTT--THHHHHHHHHTTSCSCHHHHHHHTTSHHHHHTTC
16996 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHccccc--cc-HHHH--cHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC
16997 Confidence 35677778887 47788899999999998653210 00 0111 1345666777778888999999999998887641
16998
16999
17000 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
17001 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
17002 .. ....+++.|...+.+ .++.++..++.+|+.+..... .........++.|...+.+. ++.+|..|+.
17003 T Consensus 354 ~~---l~~~ii~~L~~~L~D------~d~~VR~~av~~L~~l~~~~~--~~~~~~~~ll~~L~~~l~D~-~~~VR~~A~~ 421 (1133)
17004 T 5F0O_A 354 SD---LSDDISKGLAKALID------SDHTVRLSAIQTFHEVPVKRL--WECLPNAAVFAGLVHLTRET-RRDLRDECID 421 (1133)
17005 T ss_dssp ST---THHHHHHHHHHTTSC------SSHHHHHHHHTHHHHSCHHHH--HHHCCCHHHHHHHHHGGGBS-SHHHHHHHHH
17006 T ss_pred hh---HHHHHHHHHHHHhCC------CCHHHHHHHHHHHhhcchhcH--hhcCCchHHHHHHHHHHhcC-CHHHHHHHHH
17007 Confidence 11 112355666666766 478899999999988764311 01111134567777777766 7888999999
17008
17009
17010 Q NP_000290.2 707 LLSDMWSS 714 (747)
17011 Q Consensus 707 aLsnL~~~ 714 (747)
17012 +|+.+...
17013 T Consensus 422 aL~~l~~~ 429 (1133)
17014 T 5F0O_A 422 AVARIYTE 429 (1133)
17015 T ss_dssp HHHHHHHH
17016 T ss_pred HHHHHHHH
17017 Confidence 88887754
17018
17019
17020 No 425
17021 >2NYL_A Protein phosphatase 2, regulatory subunit; HEAT repeat, HYDROLASE-HYDROLASE INHIBITOR COMPLEX; HET: DAL, MSE, ACB, 1ZN, DAM, FGA; 3.8A {Homo sapiens} SCOP: a.118.1.2
17022 Probab=77.79 E-value=0.16 Score=49.54 Aligned_cols=109 Identities=15% Similarity=0.189 Sum_probs=67.0 Template_Neff=13.500
17023
17024 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
17025 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
17026 ..++.+...+. +.++.++..++.++..+...... .. ....+++.+...+.+.++.++..++.++..+...
17027 T Consensus 236 ~~~~~l~~~l~-~~~~~vr~~~~~~l~~~~~~~~~-------~~-~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~~~~~~ 306 (582)
17028 T 2NYL_A 236 LVMPTLRQAAE-DKSWRVRYMVADKFTELQKAVGP-------EI-TKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENL 306 (582)
17029 T ss_dssp TTHHHHHHHHH-CSSHHHHHHHHHTHHHHHHHHCS-------HH-CCCCCHHHHHHHHTCSSHHHHHHHHTTHHHHHHTS
17030 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHhHHHHHHHHCC-------CC-CHhhhHHHHHHHhcCChHHHHHHHHHHHHHHHHhC
17031 Confidence 35566666676 46777888888888887754221 11 1245667777777777788888999998888764
17032
17033
17034 Q NP_000290.2 626 PLL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
17035 Q Consensus 626 ~e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
17036 ... . ......+++.+...+.+ .++.++..++.++..+..
17037 T Consensus 307 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~l~~ 347 (582)
17038 T 2NYL_A 307 SADCRENVIMSQILPCIKELVSD------ANQHVKSALASVIMGLSP 347 (582)
17039 T ss_dssp CTTTHHHHCCCCCHHHHHHHHTC------SCHHHHHHHHHHGGGGHH
17040 T ss_pred CCcchHHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
17041 Confidence 111 1 11112345555555554 245666667777666654
17042
17043
17044 No 426
17045 >3W3W_A Importin subunit beta-3, Protein STE12; HEAT repeat, nuclear import, PROTEIN; 2.2A {Saccharomyces cerevisiae}
17046 Probab=77.60 E-value=0.16 Score=54.65 Aligned_cols=157 Identities=9% Similarity=0.079 Sum_probs=90.3 Template_Neff=13.000
17047
17048 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
17049 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
17050 +++.+...+. +.++.++..++.+|..++...+. .... ....+++.|...+.+.++.++..++.+|+.++.. +
17051 T Consensus 849 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 921 (1078)
17052 T 3W3W_A 849 IWPMINTFLL-DNEPILVIFALVVIGDLIQYGGE-----QTAS-MKNAFIPKVTECLISPDARIRQAASYIIGVCAQYAP 921 (1078)
17053 T ss_dssp GHHHHHHHHC---CHHHHHHHHHHHHHHHTC--C-----CCHH-HHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHSS
17054 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhcch-----hhHH-HHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHCc
17055 Confidence 3445555555 35667777888888888764221 1111 1245677778888888889999999999999876 2
17056
17057
17058 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
17059 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
17060 .. ...+ ..+++.+...+.........+..++..++.+|..+....+.... ....+++.++..+....+..++..++
17061 T Consensus 922 ~~~~~~~-~~~l~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~ 998 (1078)
17062 T 3W3W_A 922 STYADVC-IPTLDTLVQIVDFPGSKLEENRSSTENASAAIAKILYAYNSNIP--NVDTYTANWFKTLPTITDKEAASFNY 998 (1078)
17063 T ss_dssp TTTHHHH-HHHHHHHHHHTC--CCSSGGGHHHHHHHHHHHHHHHHHTTTSCC----CHHHHHHHTTCCCCSCHHHHHHHH
17064 T ss_pred cchHhhH-HHHHHHHHHHHhCCCCcchhchhhHHHHHHHHHHHHHHcccCCC--chhHHHHHHHHhCCccCCHHHHHHHH
17065 Confidence 21 1112 34666677766521000003567888899999988765332111 12235566666664222567788888
17066
17067
17068 Q NP_000290.2 706 LLLSDMWSS 714 (747)
17069 Q Consensus 706 ~aLsnL~~~ 714 (747)
17070 .+|..+...
17071 T Consensus 999 ~~l~~l~~~ 1007 (1078)
17072 T 3W3W_A 999 QFLSQLIEN 1007 (1078)
17073 T ss_dssp HHHHC----
17074 T ss_pred HHHHHHHHc
17075 Confidence 888777654
17076
17077
17078 No 427
17079 >4LAC_A Serine/threonine-protein phosphatase 2A activator (E.C.5.2.1.8); PP2A, PTPA, protein phosphatase, signaling; HET: AGS, MES; 2.82A {Homo sapiens}
17080 Probab=77.52 E-value=0.17 Score=44.16 Aligned_cols=115 Identities=13% Similarity=-0.025 Sum_probs=73.8 Template_Neff=12.800
17081
17082 Q NP_000290.2 239 DIECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS 318 (747)
17083 Q Consensus 239 ~~~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~ 318 (747)
17084 ........++.+...+.+.++.++..++..+..+....... .....+++.+...+.+.++.++..++.++..+....
17085 T Consensus 27 ~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~---~~~~~~~~~l~~~l~~~~~~vr~~~~~~l~~~~~~~ 103 (258)
17086 T 4LAC_A 27 CESMSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVE---RTRSELLPFIVELAEDAKWRVRLAIIEYMPLLAGQL 103 (258)
17087 T ss_pred CCCccccHHHHHHHHhcCCCHHHHHHHHHHHHHHHHccCHH---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhC
17088 Confidence 33334456666777777777888888888888877543211 112345566666676777788888888888776543
17089
17090
17091 Q NP_000290.2 319 TTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
17092 Q Consensus 319 ~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
17093 .. ......+++.+...+. +.++.++..++.++..+...
17094 T Consensus 104 ~~---~~~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~ 141 (258)
17095 T 4LAC_A 104 GV---EYFDEKLNSLCMAWLV-DHVYAIREAATSNLKKLVEK 141 (258)
17096 T ss_pred CC---hHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHc
17097 Confidence 22 1112245556666665 55677888888888887754
17098
17099
17100 No 428
17101 >6FT5_A A3_A3; alphaRep, artificial protein, chimera, bidomain; HET: GOL, SO4; 1.94A {synthetic construct}
17102 Probab=77.46 E-value=0.17 Score=47.66 Aligned_cols=60 Identities=17% Similarity=0.244 Sum_probs=30.0 Template_Neff=12.800
17103
17104 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
17105 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
17106 ..++.+...+. +.++.++..++.+|..+... ..++.+...+.+.++.++..++.++..+.
17107 T Consensus 54 ~~~~~l~~~l~-~~~~~vr~~a~~~L~~~~~~----------------~~~~~l~~~l~~~~~~vr~~a~~~l~~~~ 113 (409)
17108 T 6FT5_A 54 RAVEPLIKALK-DEDAWVRRAAADALGQIGDE----------------RAVEPLIKALKDEDGWVRQSAAVALGQIG 113 (409)
17109 T ss_pred chHHHHHHHhc-CCCHHHHHHHHHHHHHHcCc----------------hhHHHHHHHhcCCCHHHHHHHHHHHHhhC
17110 Confidence 34455555555 34555555666655554321 12233444444555556666666555544
17111
17112
17113 No 429
17114 >1F59_B IMPORTIN BETA-1/FXFG NUCLEOPORIN; Protein-protein complex, TRANSPORT PROTEIN RECEPTOR; 2.8A {Homo sapiens} SCOP: a.118.1.1
17115 Probab=77.42 E-value=0.17 Score=48.11 Aligned_cols=158 Identities=12% Similarity=0.047 Sum_probs=88.7 Template_Neff=12.900
17116
17117 Q NP_000290.2 547 DAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSS-------GMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASL 618 (747)
17118 Q Consensus 547 G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~-------~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~a 618 (747)
17119 +.+..++.++.+. .++.++..|+.+|.++...... .. ......-....+++.|+..+.+.... +..++.+
17120 T Consensus 35 ~~~~~l~~~l~~~~~~~~~r~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~-r~~~~~~ 112 (442)
17121 T 1F59_B 35 TFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDP-DIKAQYQQRWLAIDANARREVKNYVLHTLGTETYR-PSSASQC 112 (442)
17122 T ss_dssp HHHHHHHHHTTCTTSCHHHHHHHHHHHHTTTCCSSH-HHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCSSS-SCHHHHH
17123 T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHCCCCCc-hhHHHHH
17124 Confidence 4556667776521 3566777788888887643110 00 00000001234555566666544333 7778888
17125
17126
17127 Q NP_000290.2 619 LSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNS--EDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
17128 Q Consensus 619 LsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d--~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
17129 ++.++...... .....+++.+...+.+ .+ +.++..++.+|..+...............+++.+..++.+.
17130 T Consensus 113 l~~l~~~~~~~-~~~~~~~~~l~~~l~~------~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 184 (442)
17131 T 1F59_B 113 VAGIACAEIPV-NQWPELIPQLVANVTN------PNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKE- 184 (442)
17132 T ss_dssp HHHHHHHHGGG-TCCTTHHHHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHSCGGGGGGGHHHHHHHHHHTTSTT-
17133 T ss_pred HHHHHHhcCCc-chhchHHHHHHHHhhC------CCCcHHHHHHHHHHHHHHHhhCCHHHhHHHHHHHHHHHHHHHhcC-
17134 Confidence 88777541110 0112356666666665 23 67888888998888764221111111124566777777655
17135
17136
17137 Q NP_000290.2 697 S--PKAAEAARLLLSDMWSS 714 (747)
17138 Q Consensus 697 d--~eVr~aAL~aLsnL~~~ 714 (747)
17139 + ..++..++.++..++..
17140 T Consensus 185 ~~~~~vr~~a~~~l~~l~~~ 204 (442)
17141 T 1F59_B 185 EPSNNVKLAATNALLNSLEF 204 (442)
17142 T ss_dssp CCCHHHHHHHHHHHHHHSTT
17143 T ss_pred CCCHHHHHHHHHHHHHHHHH
17144 Confidence 4 78889999988888654
17145
17146
17147 No 430
17148 >2NYL_A Protein phosphatase 2, regulatory subunit; HEAT repeat, HYDROLASE-HYDROLASE INHIBITOR COMPLEX; HET: DAL, MSE, ACB, 1ZN, DAM, FGA; 3.8A {Homo sapiens} SCOP: a.118.1.2
17149 Probab=77.33 E-value=0.16 Score=49.36 Aligned_cols=70 Identities=17% Similarity=0.113 Sum_probs=41.5 Template_Neff=13.500
17150
17151 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
17152 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
17153 ..++.+...+. +.++.++..++.++..+...... . . .....++.+...+.+.++.++..++.++..+...
17154 T Consensus 318 ~~~~~l~~~l~-~~~~~vr~~~~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~ 387 (582)
17155 T 2NYL_A 318 QILPCIKELVS-DANQHVKSALASVIMGLSPILGK------D-N-TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEV 387 (582)
17156 T ss_dssp CCHHHHHHHHT-CSCHHHHHHHHHHGGGGHHHHHH------H-H-CCCCCHHHHHHHHHCSSHHHHHHHHTTHHHHTTT
17157 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhCC------c-c-chhhHHHHHHHHhcCCCHHHHHHHHHhHHHHHHh
17158 Confidence 34556666666 35666777777777776653211 1 1 1134556666666666667777777777766643
17159
17160
17161 No 431
17162 >5FVM_B SERINE/THREONINE-PROTEIN KINASE TOR2, TARGET OF; TRANSFERASE, CRYO-EM, TOR, LST8, MTOR; 6.7A {KLUYVEROMYCES MARXIANUS}
17163 Probab=77.24 E-value=0.18 Score=61.64 Aligned_cols=71 Identities=11% Similarity=0.111 Sum_probs=39.6 Template_Neff=11.500
17164
17165 Q NP_000290.2 548 AIRTYLNLMGKSKKD-ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
17166 Q Consensus 548 ~I~~LL~LL~ss~d~-eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
17167 ++..+..++.. ... .++..++.++..++..... ....+ -..+++.+...+.+.++.++..++.+|..++..
17168 T Consensus 925 ~~~~l~~~l~~-~~~~~~~~~~~~~l~~i~~~~~~-----~~~~~-l~~l~~~l~~~l~~~~~~vr~~a~~~L~~l~~~ 996 (2471)
17169 T 5FVM_B 925 VIGVLMKILKD-PSLSIHHSTVIQAIMHIFQTMGL-----RCVIF-LKQIIPGFILVMHTCPPSLLELYFQQLSVLISI 996 (2471)
17170 T ss_dssp HHHHHHHHHHC----CCHHHHHHHHHHHHHHHC-----------C-HHHHHHHHHHHHC--CHHHHHHHHHHHHHHTTS
17171 T ss_pred HHHHHHHHHcC-ccchHHHHHHHHHHHHHHHHccc-----hhHHH-HhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
17172 Confidence 34556666652 322 2666777788777653221 01111 134566677777766778888888888888764
17173
17174
17175 No 432
17176 >3LTJ_A AlphaRep-4; protein engineering, HEAT-like repeat, PROTEIN; 1.8A {synthetic}
17177 Probab=77.21 E-value=0.18 Score=42.73 Aligned_cols=121 Identities=12% Similarity=0.121 Sum_probs=68.3 Template_Neff=12.300
17178
17179 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
17180 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
17181 .++.+...+. +.++.++..++.++..+... ..++.+...+.+.++.++..++.++..+...
17182 T Consensus 77 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~----------------~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~-- 137 (201)
17183 T 3LTJ_A 77 AVEPLIKALK-DEDGWVRQSAAVALGQIGDE----------------RAVEPLIKALKDEDWFVRIAAAFALGEIGDE-- 137 (201)
17184 T ss_dssp GHHHHHHHTT-CSSHHHHHHHHHHHHHHCCG----------------GGHHHHHHHTTCSSHHHHHHHHHHHHHHTCG--
17185 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHhCCH----------------HHHHHHHHHHhCCCHHHHHHHHHHHHHHCCH--
17186 Confidence 3445555565 35566666666666655421 1233444555566667777777776665431
17187
17188
17189 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
17190 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
17191 ..++.+...+.+ .++.++..++.++..+... .....+..++.+. ++.++..++.+
17192 T Consensus 138 -------~~~~~l~~~l~~------~~~~v~~~a~~~l~~~~~~-----------~~~~~l~~~~~~~-~~~vr~~a~~~ 192 (201)
17193 T 3LTJ_A 138 -------RAVEPLIKALKD------EDGWVRQSAADALGEIGGE-----------RVRAAMEKLAETG-TGFARKVAVNY 192 (201)
17194 T ss_dssp -------GGHHHHHHHTTC------SSHHHHHHHHHHHHHHCSH-----------HHHHHHHHHHHHC-CHHHHHHHHHH
17195 T ss_pred -------HHHHHHHHHHhC------CChHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHcC-CHHHHHHHHHH
17196 Confidence 133444455544 2456677777777665431 2334455555555 67778888877
17197
17198
17199 Q NP_000290.2 708 LSDMW 712 (747)
17200 Q Consensus 708 LsnL~ 712 (747)
17201 |.++.
17202 T Consensus 193 l~~~~ 197 (201)
17203 T 3LTJ_A 193 LETHK 197 (201)
17204 T ss_dssp HHHCC
17205 T ss_pred HHhhh
17206 Confidence 77654
17207
17208
17209 No 433
17210 >5JO8_A CEP104; centriolar protein, TOG domain, CEP104; 1.4A {Gallus gallus}
17211 Probab=77.19 E-value=0.18 Score=46.55 Aligned_cols=155 Identities=14% Similarity=0.100 Sum_probs=90.5 Template_Neff=11.100
17212
17213 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLM---SSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
17214 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~---s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
17215 .++.+...+. +.++.++..++.++..++...... ... .... .-..+++.|+..+.+.+..++..+..+|..++.
17216 T Consensus 87 l~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~~~~~~~~-~~~~-~~~~~l~~ll~~l~d~~~~vr~~a~~~l~~l~~ 163 (279)
17217 T 5JO8_A 87 AIFLVRRAIK-DIVSSVFQASLKLLKMIITQYVPKHKLGKL-ETSH-CVEKTLPGLLSRTGDSSSRLRIVAAKFIQEMAL 163 (279)
17218 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHCCCCCHHHHTCCHH-HHHH-HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHH
17219 T ss_pred HHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHhcccccCChH-HHHH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHc
17220 Confidence 3445555666 466778888888888877542000 000 0111 113466777777777778888999999888875
17221
17222
17223 Q NP_000290.2 625 HPLLHRVMGNQVFP-EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
17224 Q Consensus 625 ~~e~~~ll~~giI~-~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
17225 ..... ...++. .+...+... .++.++..++.+|..++..............+++.+...+.+. ++.++..
17226 T Consensus 164 ~~~~~---~~~~~~~~l~~~l~~~-----~~~~~r~~~l~~l~~l~~~~~~~~~~~~~~~i~~~l~~~l~d~-~~~VR~~ 234 (279)
17227 T 5JO8_A 164 WSEVK---PLQIVPVHLVQLLKPN-----SPTHLAMSRVELVECLLKEMGTENSGFTISNVMKFATGALEHR-VYEVRDV 234 (279)
17228 T ss_dssp STTTG---GGCCHHHHHTSCCCTT-----SCHHHHHHHHHHHHHHHHHHCSSSSSCCHHHHHHHHHHHTTCS-CHHHHHH
17229 T ss_pred CCCCC---hhHhHHHHHhhcCCCC-----CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHhcCC-CHHHHHH
17230 Confidence 42110 011222 222333331 1566777888888887764322211111224567777777766 8899999
17231
17232
17233 Q NP_000290.2 704 ARLLLSDMWSS 714 (747)
17234 Q Consensus 704 AL~aLsnL~~~ 714 (747)
17235 +..++..+...
17236 T Consensus 235 a~~~l~~l~~~ 245 (279)
17237 T 5JO8_A 235 ALRIIFGMYRK 245 (279)
17238 T ss_dssp HHHHHHHHHHH
17239 T ss_pred HHHHHHHHHHH
17240 Confidence 99988887643
17241
17242
17243 No 434
17244 >4P6Z_G BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
17245 Probab=77.19 E-value=0.18 Score=51.67 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=52.0 Template_Neff=12.000
17246
17247 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
17248 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
17249 +++.+...+.+.+..++..++..+..+.... ....+++.+...+.+.++.++..++.++..+....+...
17250 T Consensus 117 ~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~-------~~~~~~~~l~~~l~~~~~~vr~~a~~~L~~l~~~~~~~~--- 186 (627)
17251 T 4P6Z_G 117 MTNCIKNDLNHSTQFVQGLALCTLGCMGSSE-------MCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELM--- 186 (627)
17252 T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHCCHH-------HHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHCSGGG---
17253 T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHhcCCHH-------HHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHCHHHH---
17254 Confidence 3444444444555556666666665554211 011334455555555566666666666666654322111
17255
17256
17257 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
17258 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
17259 ..+++.+...+. +.++.++..++.++..+..
17260 T Consensus 187 --~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~ 217 (627)
17261 T 4P6Z_G 187 --EMFLPATKNLLN-EKNHGVLHTSVVLLTEMCE 217 (627)
17262 T ss_dssp --GGGHHHHTTCTT-CCCHHHHHHHHHHHHHHHH
17263 T ss_pred --HHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHH
17264 Confidence 234445555554 4455666666666666654
17265
17266
17267 No 435
17268 >1GCJ_B IMPORTIN-BETA; HEAT REPEAT MOTIF, NUCLEAR PORE-TARGETING; HET: MSE; 2.6A {Mus musculus} SCOP: a.118.1.1
17269 Probab=77.16 E-value=0.17 Score=48.43 Aligned_cols=154 Identities=10% Similarity=0.066 Sum_probs=84.6 Template_Neff=12.800
17270
17271 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLM--------S----SGMSQ----LIGLKEKGLPQIARLLQSG----- 607 (747)
17272 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~--------s----~~~~~----~llie~giI~~Ll~LL~s~----- 607 (747)
17273 ++.+..++. +.++.++..++.++..++...... . ..... .. .-..+++.+...+...
17274 T Consensus 267 ~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~ 344 (460)
17275 T 1GCJ_B 267 FAITIEAMK-SDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKG-ALQYLVPILTQTLTKQDENDD 344 (460)
17276 T ss_dssp HHHHHHHHT-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSCCCCHHHH-HHHHHHHHHHHHGGGCCSSSC
17277 T ss_pred HHHHHHHhh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhhhhHhH-HHHHHHHHHHHHHhcCCCCCC
17278 Confidence 555666666 356777778888888776531000 0 00000 00 0122344444444322
17279
17280
17281 Q NP_000290.2 608 --NSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL-AKQYFSSSM 684 (747)
17282 Q Consensus 608 --d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~-~~~Lve~gi 684 (747)
17283 +..++..+..++..++..... ..+ ..+++.+...+.+ .++.++..++.+|..+....... ....+ ..+
17284 T Consensus 345 ~~~~~~~~~a~~~l~~l~~~~~~-~~~-~~~~~~l~~~l~~------~~~~~r~~a~~~l~~l~~~~~~~~~~~~~-~~~ 415 (460)
17285 T 1GCJ_B 345 DDDWNPCKAAGVCLMLLSTCCED-DIV-PHVLPFIKEHIKN------PDWRYRDAAVMAFGSILEGPEPNQLKPLV-IQA 415 (460)
17286 T ss_dssp TTSCCHHHHHHHHHHHHHHHHGG-GHH-HHHHHHHHHHTTC------SSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHH
17287 T ss_pred CCCCcHHHHHHHHHHHHHhhCcc-ccH-HHHHHHHHHHhcC------CChHHHHHHHHHHHHHHcCCChhhHHHHH-HHH
17288 Confidence 345666677777776654110 111 1234444444444 36778889999999988653321 11111 245
17289
17290
17291 Q NP_000290.2 685 LNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
17292 Q Consensus 685 L~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
17293 ++.+...+.+. ++.++..++++|..++..
17294 T Consensus 416 ~~~l~~~l~~~-~~~vr~~a~~~l~~l~~~ 444 (460)
17295 T 1GCJ_B 416 MPTLIELMKDP-SVVVRDTTAWTVGRICEL 444 (460)
17296 T ss_dssp HHHHHHHTTCS-CHHHHHHHHHHHHHHHHH
17297 T ss_pred HHHHHHHhCCC-CHHHHHHHHHHHHHHHHh
17298 Confidence 66667777666 788999999999988754
17299
17300
17301 No 436
17302 >6GWC_C Tubulin alpha chain, Tubulin beta; microtubule, ARTIFICIAL PROTEIN, ALPHAREP, cytoskeleton; HET: GTP, MES, PGE; 2.6A {Ovis aries}
17303 Probab=76.89 E-value=0.18 Score=43.85 Aligned_cols=121 Identities=12% Similarity=0.169 Sum_probs=73.3 Template_Neff=12.200
17304
17305 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
17306 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
17307 .++.+..++. +.++.++..++.+|..+... ..++.+..++.+.++.++..++.++..+...
17308 T Consensus 108 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~----------------~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~-- 168 (232)
17309 T 6GWC_C 108 AVEPLIKALK-DEDTTVRRIAATALGKIGDE----------------RAVEPLIKALKDEDAAVRLTAARALGEIGDE-- 168 (232)
17310 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHhccc----------------chHHHHHHHhcCCCHHHHHHHHHHHHHhCCh--
17311 Confidence 3455666665 35667777777777665431 1233455566666777888888777766431
17312
17313
17314 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
17315 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
17316 ..++.+...+.+ .++.++..++.+|..+... ..+..+..++.+. ++.++..++.+
17317 T Consensus 169 -------~~~~~l~~~l~~------~~~~v~~~a~~~l~~~~~~-----------~~~~~l~~~~~~~-~~~v~~~a~~~ 223 (232)
17318 T 6GWC_C 169 -------RAVEPLIKALKD------EDAYVRRAAAQALGKIGGE-----------RVRAAMEKLAETG-TGFARKVAVNY 223 (232)
17319 T ss_pred -------hHHHHHHHHhcC------CCHHHHHHHHHHHHHhCcC-----------chHHHHHHHHhCC-CHHHHHHHHHH
17320 Confidence 234445555554 2567777788887776542 2344455555554 66777778777
17321
17322
17323 Q NP_000290.2 708 LSDMW 712 (747)
17324 Q Consensus 708 LsnL~ 712 (747)
17325 |..+.
17326 T Consensus 224 l~~~~ 228 (232)
17327 T 6GWC_C 224 LETHK 228 (232)
17328 T ss_pred HHHHH
17329 Confidence 77654
17330
17331
17332 No 437
17333 >3QML_D 78 kDa glucose-regulated protein homolog; Armadillo like repeats, CHAPERONE-PROTEIN TRANSPORT; HET: PO4; 2.31A {Saccharomyces cerevisiae}
17334 Probab=76.82 E-value=0.22 Score=49.40 Aligned_cols=104 Identities=8% Similarity=0.064 Sum_probs=73.8 Template_Neff=7.900
17335
17336 Q NP_000290.2 609 SDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSS--ML 685 (747)
17337 Q Consensus 609 ~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~g--iL 685 (747)
17338 ...+..++.-|..++..-++ ..+...+ +..|+.++... .....++..|+++|+..+.+++.....+.+.+ ++
17339 T Consensus 42 ~~~~~~aLd~L~dl~hdid~a~~~~~~g-~~~L~~~l~~~----~~~~~ir~~Aa~iigsa~qNNP~aq~~~~~~~~~~l 116 (315)
17340 T 3QML_D 42 IARLEDSFDRIMEFAHDYKHGYKIITHE-FALLANLSLNE----NLPLTLRELSTRVITSCLRNNPPVVEFINESFPNFK 116 (315)
17341 T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHHH-HHHHHHHHHCT----TSCHHHHHHHHHHHHHHHTTCTTHHHHHHHHCTTHH
17342 T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHch-HHHHHHHHhCC----CCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHCccHH
17343 Confidence 34455566666666655333 3455566 77777776541 02578999999999999999988888888766 67
17344
17345
17346 Q NP_000290.2 686 NNII---NLCRS---SASPKAAEAARLLLSDMWSSKEL 717 (747)
17347 Q Consensus 686 ~~Ll---~LL~s---~~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
17348 +.|+ ..+.. ..++.++..++.+|+.++.+.+.
17349 T Consensus 117 ~~Ll~~~~~L~~~~~~~~~~v~~k~L~aLS~Lir~~~~ 154 (315)
17350 T 3QML_D 117 SKIMAALSNLNDSNHRSSNILIKRYLSILNELPVTSED 154 (315)
17351 T ss_dssp HHHHHHHHHHHCC---CTHHHHHHHHHHHHHSCCCGGG
17352 T ss_pred HHHHHHHHhhccCCCcCCHHHHHHHHHHHHhhcCCCcc
17353 Confidence 7777 44443 22678889999999999988765
17354
17355
17356 No 438
17357 >4G3A_B CLIP-associating protein; TOG domain, HEAT repeat, MAP; HET: GOL; 1.994A {Drosophila melanogaster}
17358 Probab=76.80 E-value=0.18 Score=43.50 Aligned_cols=113 Identities=13% Similarity=0.037 Sum_probs=64.2 Template_Neff=12.600
17359
17360 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
17361 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
17362 ..+++.+...+.+.++.++..++..+..++..............+++.+...+.+.++.++..++.++..++........
17363 T Consensus 6 ~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~~v~~~a~~~l~~l~~~~~~~~~ 85 (237)
17364 T 4G3A_B 6 PSDLDGFIQQMPKADMRVKVQLAEDLVTFLSDDTNSIVCTDMGFLIDGLMPWLTGSHFKIAQKSLEAFSELIKRLGSDFN 85 (237)
17365 T ss_dssp CSSHHHHHHHSTTCCHHHHHHHHHHHHHHHHCTTSCCCCSCHHHHHHHHGGGGSSSCHHHHHHHHHHHHHHHHHHGGGGG
17366 T ss_pred cchHHHHHHhcCcCCHHHHHHHHHHHHHHhhCCCCCcccccHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhhHH
17367 Confidence 34455566666677778888888888887764321111111123556666667667778888888888887754332111
17368
17369
17370 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
17371 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
17372 .. ...+++.+...+. +.+..++..++.++..+.
17373 T Consensus 86 ~~-~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~ 118 (237)
17374 T 4G3A_B 86 AY-TATVLPHVIDRLG-DSRDTVREKAQLLLRDLM 118 (237)
17375 T ss_dssp GT-HHHHHHHHHHHHT-CSCHHHHHHHHHHHHHHH
17376 T ss_pred HH-HHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHH
17377 Confidence 11 1234455555554 334445555555555544
17378
17379
17380 No 439
17381 >6IDX_A Engulfment and cell motility protein; Adhesion GPCRs, CELL ADHESION; 1.699A {Homo sapiens}
17382 Probab=76.77 E-value=0.22 Score=52.79 Aligned_cols=157 Identities=13% Similarity=0.168 Sum_probs=98.0 Template_Neff=8.400
17383
17384 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG------NSDVVRSGASLLSNMSRHP-LL-HRVMGN 634 (747)
17385 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~------d~eVr~~AL~aLsnLa~~~-e~-~~ll~~ 634 (747)
17386 ..+..++.-|..++.. .. ....|++.+++..|+.++... +......++.+|..+.... .. ..+. .
17387 T Consensus 102 ~~~~~~L~~L~~~~~d-~~-----f~~EFi~~~Gl~~L~~~l~~~~~~~~~~~~~l~~~L~al~~lM~~~~~g~~~l~-~ 174 (524)
17388 T 6IDX_A 102 ETRLDAMKELAKLSAD-VT-----FATEFINMDGIIVLTRLVESGTKLLSHYSEMLAFTLTAFLELMDHGIVSWDMVS-I 174 (524)
17389 T ss_pred HHHHHHHHHHHHHhcC-hh-----HHHHHHHcChHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhcCcccHhhch-H
17390 Confidence 3444566666666653 22 345557788999999988863 4466777888888888764 32 2222 3
17391
17392
17393 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
17394 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
17395 ..+..|..++... ..+..+...++.+|..++...+.....+.....+..|+..|... +..++..++.++..|...
17396 T Consensus 175 ~~i~~l~~~l~~~----~~~~~v~~~aL~iL~~l~~~~~~~~~~v~~~~~f~~Lv~~L~~~-d~~~q~~~L~LINaLl~~ 249 (524)
17397 T 6IDX_A 175 TFIKQIAGYVSQP----MVDVSILQRSLAILESMVLNSQSLYQKIAEEITVGQLISHLQVS-NQEIQTYAIALINALFLK 249 (524)
17398 T ss_pred HHHHHHHHHhCCC----CCChhHHHHHHHHHHHHHhcCHHHHHHHHcCCCHHHHHHHHccC-CHHHHHHHHHHHHHHHhc
17399 Confidence 4667777777542 00237888899999888775433333222222377788888765 677778887777777654
17400
17401
17402 Q NP_000290.2 715 K------ELQGVLRQQGFDRNML 731 (747)
17403 Q Consensus 715 ~------~~~~~~~~~~~~~~~~ 731 (747)
17404 . ++..-|...|+..-..
17405 T Consensus 250 ~~~~~~~~i~~~L~~~gi~~~i~ 272 (524)
17406 T 6IDX_A 250 APEDKRQDMANAFAQKHLRSIIL 272 (524)
17407 T ss_pred CCcccHHHHHHHHHHcCHHHHHH
17408 Confidence 4 3444555666655433
17409
17410
17411 No 440
17412 >6IE1_A Engulfment and cell motility protein; Adhesion GPCR, BAI1-ELMO2 Complex, cell; HET: GOL; 2.48A {Homo sapiens}
17413 Probab=76.77 E-value=0.22 Score=52.79 Aligned_cols=157 Identities=13% Similarity=0.168 Sum_probs=98.0 Template_Neff=8.400
17414
17415 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG------NSDVVRSGASLLSNMSRHP-LL-HRVMGN 634 (747)
17416 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~------d~eVr~~AL~aLsnLa~~~-e~-~~ll~~ 634 (747)
17417 ..+..++.-|..++.. .. ....|++.+++..|+.++... +......++.+|..+.... .. ..+. .
17418 T Consensus 102 ~~~~~~L~~L~~~~~d-~~-----f~~EFi~~~Gl~~L~~~l~~~~~~~~~~~~~l~~~L~al~~lM~~~~~g~~~l~-~ 174 (524)
17419 T 6IE1_A 102 ETRLDAMKELAKLSAD-VT-----FATEFINMDGIIVLTRLVESGTKLLSHYSEMLAFTLTAFLELMDHGIVSWDMVS-I 174 (524)
17420 T ss_pred HHHHHHHHHHHHHhcC-hh-----HHHHHHHcChHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhcCcccHhhch-H
17421 Confidence 3444566666666653 22 345557788999999988863 4466777888888888764 32 2222 3
17422
17423
17424 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
17425 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
17426 ..+..|..++... ..+..+...++.+|..++...+.....+.....+..|+..|... +..++..++.++..|...
17427 T Consensus 175 ~~i~~l~~~l~~~----~~~~~v~~~aL~iL~~l~~~~~~~~~~v~~~~~f~~Lv~~L~~~-d~~~q~~~L~LINaLl~~ 249 (524)
17428 T 6IE1_A 175 TFIKQIAGYVSQP----MVDVSILQRSLAILESMVLNSQSLYQKIAEEITVGQLISHLQVS-NQEIQTYAIALINALFLK 249 (524)
17429 T ss_pred HHHHHHHHHhCCC----CCChhHHHHHHHHHHHHHhcCHHHHHHHHcCCCHHHHHHHHccC-CHHHHHHHHHHHHHHHhc
17430 Confidence 4667777777542 00237888899999888775433333222222377788888765 677778887777777654
17431
17432
17433 Q NP_000290.2 715 K------ELQGVLRQQGFDRNML 731 (747)
17434 Q Consensus 715 ~------~~~~~~~~~~~~~~~~ 731 (747)
17435 . ++..-|...|+..-..
17436 T Consensus 250 ~~~~~~~~i~~~L~~~gi~~~i~ 272 (524)
17437 T 6IE1_A 250 APEDKRQDMANAFAQKHLRSIIL 272 (524)
17438 T ss_pred CCcccHHHHHHHHHHcCHHHHHH
17439 Confidence 4 3444555666655433
17440
17441
17442 No 441
17443 >5H2V_A Importin subunit beta-3, Ubiquitin-like-specific protease; nuclear import, PROTEIN TRANSPORT-HYDROLASE complex; 2.8A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
17444 Probab=76.57 E-value=0.18 Score=54.22 Aligned_cols=157 Identities=9% Similarity=0.079 Sum_probs=92.1 Template_Neff=13.000
17445
17446 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
17447 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
17448 +++.+...+. +.++.++..++.++..++..... .... ....+++.|...+.+.++.++..++.+|+.++.. +
17449 T Consensus 849 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 921 (1078)
17450 T 5H2V_A 849 IWPMINTFLL-DNEPILVIFALVVIGDLIQYGGE-----QTAS-MKNAFIPKVTECLISPDARIRQAASYIIGVCAQYAP 921 (1078)
17451 T ss_dssp GHHHHHHHHH-SSSHHHHHHHHHHHHHHHHHHTT-----TTTT-THHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHCT
17452 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhcch-----hhHH-HHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHCc
17453 Confidence 3445555555 35667777888888887754221 1111 1245677778888888889999999999999876 2
17454
17455
17456 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
17457 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
17458 .. ...+ ..+++.+...+.........+..++..++.+|..+....+.... ....+++.++..+....+..++..++
17459 T Consensus 922 ~~~~~~~-~~~l~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~ 998 (1078)
17460 T 5H2V_A 922 STYADVC-IPTLDTLVQIVDFPGSKLEENRSSTENASAAIAKILYAYNSNIP--NVDTYTANWFKTLPTITDKEAASFNY 998 (1078)
17461 T ss_dssp TTTHHHH-TTTHHHHHHHTC--CCSSTTTHHHHHHHHHHHHHHHHHC---------CHHHHHHHTTCCCCSCHHHHHHHH
17462 T ss_pred cchHHhH-HHHHHHHHHHHhCCCCccccccchHHHHHHHHHHHHHHcccCCC--ChhHHHHHHHHhCCccCCHHHHHHHH
17463 Confidence 21 1111 34666677766521000003567888899999888764322111 11234556666664222567777888
17464
17465
17466 Q NP_000290.2 706 LLLSDMWSS 714 (747)
17467 Q Consensus 706 ~aLsnL~~~ 714 (747)
17468 .+|..+...
17469 T Consensus 999 ~~l~~l~~~ 1007 (1078)
17470 T 5H2V_A 999 QFLSQLIEN 1007 (1078)
17471 T ss_dssp HHHHHHHC-
17472 T ss_pred HHHHHHHHc
17473 Confidence 888777654
17474
17475
17476 No 442
17477 >1TE4_A conserved protein MTH187; MTH187, Methanobacterium thermoautotrophicum, structural proteomics; NMR {Methanothermobacter thermautotrophicus} SCOP: a.118.1.16
17478 Probab=76.51 E-value=0.19 Score=39.52 Aligned_cols=118 Identities=13% Similarity=0.147 Sum_probs=65.1 Template_Neff=12.000
17479
17480 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
17481 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
17482 ..+.+...+. +.++.++..++..|..+.. ..++.+...+.+.++.++..++.++..+...
17483 T Consensus 13 ~~~~~~~~l~-~~~~~~r~~a~~~l~~~~~-----------------~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~-- 72 (131)
17484 T 1TE4_A 13 GLVPRGSHMA-DENKWVRRDVSTALSRMGD-----------------EAFEPLLESLSNEDWRIRGAAAWIIGNFQDE-- 72 (131)
17485 T ss_dssp --------CC-SSCCCSSSSCCSSTTSCSS-----------------TTHHHHHHGGGCSCHHHHHHHHHHHGGGCSH--
17486 T ss_pred CccccHHHhc-CCCHHHHHHHHHHHHHhcH-----------------HHHHHHHHHhcCCCHHHHHHHHHHHHcCCCh--
17487 Confidence 3455666666 4666777777766654421 1234455556666777888888888776532
17488
17489
17490 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
17491 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
17492 ..++.|...+.+ .++.++..++.+|..+... ..++.+...+.+. +..++..++.+
17493 T Consensus 73 -------~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a~~~ 127 (131)
17494 T 1TE4_A 73 -------RAVEPLIKLLED------DSGFVRSGAARSLEQIGGE-----------RVRAAMEKLAETG-TGFARKVAVNY 127 (131)
17495 T ss_dssp -------HHHHHHHHHHHH------CCTHHHHHHHHHHHHHCSH-----------HHHHHHHHHTTSC-CTHHHHHHHHH
17496 T ss_pred -------hhHHHHHHHhcC------CCHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHcCC-CHHHHHHHHHH
17497 Confidence 133444455544 2567777788888776531 1344455555544 56677766666
17498
17499
17500 Q NP_000290.2 708 LSD 710 (747)
17501 Q Consensus 708 Lsn 710 (747)
17502 +..
17503 T Consensus 128 l~~ 130 (131)
17504 T 1TE4_A 128 LET 130 (131)
17505 T ss_dssp GGG
17506 T ss_pred Hhc
17507 Confidence 543
17508
17509
17510 No 443
17511 >6S47_Bi 60S ribosomal protein L2-A, 60S; New1, ABCF, Ribosomal Protein, Recycling; HET: ATP; 3.28A {Saccharomyces cerevisiae}
17512 Probab=76.45 E-value=0.2 Score=54.82 Aligned_cols=155 Identities=15% Similarity=0.167 Sum_probs=91.4 Template_Neff=11.700
17513
17514 Q NP_000290.2 548 AIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
17515 Q Consensus 548 ~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
17516 +++.|..++.. .+ +.++..++.+|..++..... .........+++.|+.++.+.++.++..|+.+|..++..
17517 T Consensus 127 ~~~~l~~~l~~-~~~~~vr~~a~~~l~~i~~~~~~-----~~~~~~~~~~~~~l~~~l~d~~~~vr~~a~~~L~~l~~~~ 200 (972)
17518 T 6S47_Bi 127 VLPTILDYLSS-GAKWQAKMAALSVVDRIREDSAN-----DLLELTFKDAVPVLTDVATDFKPELAKQGYKTLLDYVSIL 200 (972)
17519 T ss_pred hHHHHHHHcCC-CCCHHHHHHHHHHHHHHHhhCCH-----HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHh
17520 Confidence 46667777763 44 67888889998888543221 111112345777788888888888899999988888753
17521
17522
17523 Q NP_000290.2 626 PL-L-H----RV---MG--------------------------NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
17524 Q Consensus 626 ~e-~-~----~l---l~--------------------------~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
17525 .. . . .+ +. ..+++.+...+.+. ..+..++..++++|..++.
17526 T Consensus 201 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~vr~~a~~~l~~l~~ 276 (972)
17527 T 6S47_Bi 201 DNLDLSPRYKLIVDTLQDPSKVPESVKSLSSVTFVAEVTEPSLSLLVPILNRSLNLS----SSSQEQLRQTVIVVENLTR 276 (972)
17528 T ss_pred CcHHHHHHHHHHHHHcCChHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhCC----CCCHHHHHHHHHHHHHHHH
17529 Confidence 10 0 0 00 00 00223333333220 0245677788888888875
17530
17531
17532 Q NP_000290.2 671 --SQPQLAKQYFSSSMLNNIINLC-RSSASPKAAEAARLLLSDMWSS 714 (747)
17533 Q Consensus 671 --~s~e~~~~Lve~giL~~Ll~LL-~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
17534 ........+ ...+++.|+..+ .+. +..++..|+.+|..++..
17535 T Consensus 277 ~~~~~~~~~~~-~~~i~~~L~~~l~~d~-~~~vr~~a~~~l~~l~~~ 321 (972)
17536 T 6S47_Bi 277 LVNNRNEIESF-IPLLLPGIQKVVDTAS-LPEVRELAEKALNVLKED 321 (972)
17537 T ss_pred hcCChhHcHhh-HHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHhhh
17538 Confidence 211111111 124566777777 555 778899999999998876
17539
17540
17541 No 444
17542 >1OYZ_A X-RAY STRUCTURE OF YB61_HAEIN NORTHEAST; STRUCTURAL GENOMICS, PSI, Protein Structure; 2.1A {Escherichia coli} SCOP: a.118.1.16
17543 Probab=76.37 E-value=0.19 Score=44.51 Aligned_cols=96 Identities=7% Similarity=0.086 Sum_probs=47.9 Template_Neff=12.700
17544
17545 Q NP_000290.2 596 GLPQIAR-LLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ 674 (747)
17546 Q Consensus 596 iI~~Ll~-LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e 674 (747)
17547 .++.+.. ++.+.++.++..++.+|..+...... .....++.+...+.+ .++.++..++.+|..+..
17548 T Consensus 91 ~~~~l~~~~l~~~~~~vr~~a~~~l~~~~~~~~~---~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~~~~---- 157 (280)
17549 T 1OYZ_A 91 VFNILNNMALNDKSACVRATAIESTAQRCKKNPI---YSPKIVEQSQITAFD------KSTNVRRATAFAISVIND---- 157 (280)
17550 T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGG---GHHHHHHHHHHHTTC------SCHHHHHHHHHHHHTC------
17551 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCcc---cChhHHHHHHHHhcC------CCHHHHHHHHHHHHhhcc----
17552 Confidence 3444444 44444555555555555554432100 112244455555544 245566666666655442
17553
17554
17555 Q NP_000290.2 675 LAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
17556 Q Consensus 675 ~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
17557 ...++.+..++.+. ++.++..++.++..+.
17558 T Consensus 158 -------~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~ 187 (280)
17559 T 1OYZ_A 158 -------KATIPLLINLLKDP-NGDVRNWAAFAININK 187 (280)
17560 T ss_dssp --------CCHHHHHHHHTCS-SHHHHHHHHHHHHHHT
17561 T ss_pred -------hhhHHHHHHHHcCC-CHHHHHHHHHHHHhhc
17562 Confidence 12345555666655 6677777777777543
17563
17564
17565 No 445
17566 >5NR4_A CLIP-associating protein 2; Microtubules, TOG domain, Tubulin, Structural; 1.198A {Homo sapiens}
17567 Probab=76.18 E-value=0.19 Score=42.69 Aligned_cols=111 Identities=10% Similarity=0.045 Sum_probs=61.9 Template_Neff=12.900
17568
17569 Q NP_000290.2 595 KGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HR---V--MGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNL 668 (747)
17570 Q Consensus 595 giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~---l--l~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnL 668 (747)
17571 ..++.+...+.+.+..++..++..|..+...... .. . ....+++.+...+.+ .++.++..++.++..+
17572 T Consensus 6 ~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l 79 (230)
17573 T 5NR4_A 6 RSMEYFCAQVQQKDVGGRLQVGQELLLYLGAPGAISDLEEDLGRLGKTVDALTGWVGS------SNYRVSLMGLEILSAF 79 (230)
17574 T ss_dssp CCHHHHHHHTTCSCGGGHHHHHHHHHHHHHC-----CTTSCHHHHHHHHHHHHHHHHC------SSHHHHHHHHHHHHHH
17575 T ss_pred hhHHHHHHHHhCCChhHHHHHHHHHHHHhcCCcccCchHHHHHHHHHHHHHHHHHHcC------CCHHHHHHHHHHHHHH
17576 Confidence 3455566666667778888888888888765211 10 0 012345555666654 3677888888888888
17577
17578
17579 Q NP_000290.2 669 MASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
17580 Q Consensus 669 a~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
17581 +...+....... ..+++.++..+.+. +..++..++.++..++.
17582 T Consensus 80 ~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~ 122 (230)
17583 T 5NR4_A 80 VDRLSTRFKSYV-AMVIVALIDRMGDA-KDKVRDEAQTLILKLMD 122 (230)
17584 T ss_dssp HHHHGGGGGGGH-HHHHHHHHHHTTCS-SHHHHHHHHHHHHHHHH
17585 T ss_pred HHHhhHHHHHHH-HHHHHHHHHHhccC-CHHHHHHHHHHHHHHHH
17586 Confidence 764322111111 23445555555544 45566666666665553
17587
17588
17589 No 446
17590 >5A1V_E ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT; TRANSPORT PROTEIN, COPI, COATOMER, COATED; 21.0A {SACCHAROMYCES CEREVISIAE}
17591 Probab=75.90 E-value=0.22 Score=54.55 Aligned_cols=137 Identities=11% Similarity=0.073 Sum_probs=78.0 Template_Neff=10.900
17592
17593 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
17594 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
17595 +++.|+.++. +.+..++..++.++..+....+. . ..+++.|...+.+.++.++..++.+|..+.....
17596 T Consensus 69 l~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~----------~-~~i~~~l~~~L~~~~~~vr~~al~~L~~~~~~~~ 136 (874)
17597 T 5A1V_E 69 AFFAMTKLFQ-SNDPTLRRMCYLTIKEMSCIAED----------V-IIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTM 136 (874)
17598 T ss_dssp HHHHHHHGGG-SCCHHHHHHHHHHHHHHHTSCSC----------G-GGHHHHHHHHHHSSSHHHHHHHHHHHHHHCCHHH
17599 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHhcccCch----------H-hHHHHHHHHhcCCCChhhHHHHHHHHhhcCCHHH
17600 Confidence 4555666666 36667777777777776653211 1 2345566666666677777777777776643210
17601
17602
17603 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
17604 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
17605 ...+++.+...+.+ .++.++..++.++..+....+... ...++.+...+.+. ++.++..++.+
17606 T Consensus 137 -----~~~l~~~l~~~l~d------~~~~Vr~~a~~~l~~l~~~~~~~~-----~~~~~~l~~~l~~~-~~~vr~~a~~~ 199 (874)
17607 T 5A1V_E 137 -----LQAVERYMKQAIVD------KVPSVSSSALVSSLHLLKCSFDVV-----KRWVNEAQEAASSD-NIMVQYHALGL 199 (874)
17608 T ss_dssp -----HHHHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHCHHHH-----HHTHHHHHHHHTCC-SHHHHHHHHHH
17609 T ss_pred -----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCHHHH-----HHHHHHHHHHhcCC-CHHHHHHHHHH
17610 Confidence 01234444455544 256677777777777765322111 13445555555544 56667777766
17611
17612
17613 Q NP_000290.2 708 LSDMWS 713 (747)
17614 Q Consensus 708 LsnL~~ 713 (747)
17615 |..+..
17616 T Consensus 200 L~~l~~ 205 (874)
17617 T 5A1V_E 200 LYHVRK 205 (874)
17618 T ss_dssp HHHHHC
17619 T ss_pred HHHHHh
17620 Confidence 666654
17621
17622
17623 No 447
17624 >5NZR_G Coatomer subunit alpha, Coatomer subunit; COPI, coatomer, coated vesicles, Transport; 9.2A {Mus musculus}
17625 Probab=75.90 E-value=0.22 Score=54.55 Aligned_cols=137 Identities=11% Similarity=0.073 Sum_probs=78.0 Template_Neff=10.900
17626
17627 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
17628 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
17629 +++.|+.++. +.+..++..++.++..+....+. . ..+++.|...+.+.++.++..++.+|..+.....
17630 T Consensus 69 l~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~----------~-~~i~~~l~~~L~~~~~~vr~~al~~L~~~~~~~~ 136 (874)
17631 T 5NZR_G 69 AFFAMTKLFQ-SNDPTLRRMCYLTIKEMSCIAED----------V-IIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTM 136 (874)
17632 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHhcccCch----------H-hHHHHHHHHhcCCCChhhHHHHHHHHhhcCCHHH
17633 Confidence 4555666666 36667777777777776653211 1 2345566666666677777777777776643210
17634
17635
17636 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
17637 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
17638 ...+++.+...+.+ .++.++..++.++..+....+... ...++.+...+.+. ++.++..++.+
17639 T Consensus 137 -----~~~l~~~l~~~l~d------~~~~Vr~~a~~~l~~l~~~~~~~~-----~~~~~~l~~~l~~~-~~~vr~~a~~~ 199 (874)
17640 T 5NZR_G 137 -----LQAVERYMKQAIVD------KVPSVSSSALVSSLHLLKCSFDVV-----KRWVNEAQEAASSD-NIMVQYHALGL 199 (874)
17641 T ss_pred -----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCHHHH-----HHHHHHHHHHhcCC-CHHHHHHHHHH
17642 Confidence 01234444455544 256677777777777765322111 13445555555544 56667777766
17643
17644
17645 Q NP_000290.2 708 LSDMWS 713 (747)
17646 Q Consensus 708 LsnL~~ 713 (747)
17647 |..+..
17648 T Consensus 200 L~~l~~ 205 (874)
17649 T 5NZR_G 200 LYHVRK 205 (874)
17650 T ss_pred HHHHHh
17651 Confidence 666654
17652
17653
17654 No 448
17655 >6HWP_A A3_bGFPD; alphaRep, artificial protein, chimera, bidomain; 2.547A {synthetic construct}
17656 Probab=75.54 E-value=0.21 Score=46.83 Aligned_cols=49 Identities=8% Similarity=0.078 Sum_probs=32.0 Template_Neff=12.900
17657
17658 Q NP_000290.2 654 SEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
17659 Q Consensus 654 d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
17660 ++.++..++.++..+.. ...++.+..++.+. ++.++..++.++..+...
17661 T Consensus 129 ~~~vr~~~~~~l~~~~~-----------~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~ 177 (409)
17662 T 6HWP_A 129 DWFVRIAAAFALGEIGD-----------ERAVEPLIKALKDE-DGWVRQSAADALGEIGGE 177 (409)
17663 T ss_dssp SHHHHHHHHHHHHHHTC-----------GGGHHHHHHGGGCS-SHHHHHHHHHHHHHHCCH
17664 T ss_pred CHHHHHHHHHHHHHhCC-----------hhhHHHHHHHhcCC-CHHHHHHHHHHHHHhcch
17665 Confidence 45666666666666543 12345566666655 678888888888887754
17666
17667
17668 No 449
17669 >3W3U_A Importin subunit beta-3; HEAT repeat, nuclear import, PROTEIN; 2.6A {Saccharomyces cerevisiae}
17670 Probab=75.50 E-value=0.21 Score=53.79 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=91.0 Template_Neff=13.000
17671
17672 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PL 627 (747)
17673 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e 627 (747)
17674 ++.+...+. +.++.++..++.+|..++..... .... .-..+++.+...+.+.++.++..++.++..++.. ..
17675 T Consensus 358 ~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~ 430 (1078)
17676 T 3W3U_A 358 FQYLQQMIT-STEWRERFAAMMALSSAAAGCAD-----VLIG-EIPKILDMVIPLINDPHPRVQYGCCKVLGQISTAFSP 430 (1078)
17677 T ss_dssp HHHHHHHTT-CSSHHHHHHHHHHHHHHTTTTHH-----HHTT-SHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTTT
17678 T ss_pred HHHHHHHhc-CCCHHHHHHHHHHHHHHHHccHH-----HHHh-hHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHccH
17679 Confidence 344445554 35677888888888888764321 0111 1135666677777777888999999999998865 11
17680
17681
17682 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
17683 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
17684 . .......+++.+...+... .+..++..++.+|..++..... ..... -..++..+...+.+. ++.++..++
17685 T Consensus 431 ~~~~~~~~~~~~~l~~~l~~~-----~~~~vr~~a~~~l~~l~~~~~~~~~~~~-~~~~~~~l~~~l~~~-~~~~~~~~~ 503 (1078)
17686 T 3W3U_A 431 FIQRTAHDRILPALISKLTSE-----CTSRVQTHAAAALVAFSEFASKDILEPY-LDSLLTNLLVLLQSN-KLYVQEQAL 503 (1078)
17687 T ss_dssp HHHHHHHHHHHHHHHHHSSTT-----SCHHHHHHHHHHHHHHHTTCCHHHHGGG-HHHHHHHHHHHHTCS-SHHHHHHHH
17688 T ss_pred HHHHHHHHHHHHHHHHHcCCC-----CCHHHHHHHHHHHHHHHHhCChhhhHHH-HHHHHHHHHHHhcCC-CHHHHHHHH
17689 Confidence 1 1111123555566655521 2567788888888888764221 11111 123556666666655 667777788
17690
17691
17692 Q NP_000290.2 706 LLLSDMWSS 714 (747)
17693 Q Consensus 706 ~aLsnL~~~ 714 (747)
17694 .+|..++..
17695 T Consensus 504 ~~l~~l~~~ 512 (1078)
17696 T 3W3U_A 504 TTIAFIAEA 512 (1078)
17697 T ss_dssp HHHHHHHHH
17698 T ss_pred HHHHHHHHH
17699 Confidence 887776643
17700
17701
17702 No 450
17703 >4QMI_B Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG domain; 1.9A {Homo sapiens}
17704 Probab=75.47 E-value=0.21 Score=43.16 Aligned_cols=107 Identities=13% Similarity=0.065 Sum_probs=67.9 Template_Neff=12.600
17705
17706 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
17707 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
17708 .+++.+...+.+.++.++..++.++..+........... ...+++.+...+.+.+..++..++.++..+.....
17709 T Consensus 59 ~~~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~----- 132 (240)
17710 T 4QMI_B 59 ELPTALKGRLNDSNKILVQQTLNILQQLAVAMGPNIKQH-VKNLGIPIITVLGDSKNNVRAAALATVNAWAEQTG----- 132 (240)
17711 T ss_dssp THHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHGGGGGGG-CCCCCHHHHHHTTCSSHHHHHHHHHHHHHHHHHHC-----
17712 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhcHHHHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC-----
17713 Confidence 344555556666777888888888888876533221111 12355666666666667788888888877765422
17714
17715
17716 Q NP_000290.2 325 TRRQNGI--REAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
17717 Q Consensus 325 ll~~~IL--~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
17718 ...++ +.+...+. +.++.++..++.++..++..
17719 T Consensus 133 --~~~~~~~~~l~~~l~-~~~~~~r~~~~~~l~~l~~~ 167 (240)
17720 T 4QMI_B 133 --MKEWLEGEDLSEELK-KENPFLRQELLGWLAEKLPT 167 (240)
17721 T ss_dssp --SHHHHSSSHHHHHHT-SCCHHHHHHHHHHHHHHGGG
17722 T ss_pred --hhHhccHHHHHHHHh-cCCHHHHHHHHHHHHHHHHh
17723 Confidence 11244 55566665 55677888888888877653
17724
17725
17726 No 451
17727 >4QMJ_A Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG DOMAIN; 2.498A {Homo sapiens}
17728 Probab=75.47 E-value=0.21 Score=43.16 Aligned_cols=107 Identities=13% Similarity=0.065 Sum_probs=67.9 Template_Neff=12.600
17729
17730 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
17731 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
17732 .+++.+...+.+.++.++..++.++..+........... ...+++.+...+.+.+..++..++.++..+.....
17733 T Consensus 59 ~~~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~----- 132 (240)
17734 T 4QMJ_A 59 ELPTALKGRLNDSNKILVQQTLNILQQLAVAMGPNIKQH-VKNLGIPIITVLGDSKNNVRAAALATVNAWAEQTG----- 132 (240)
17735 T ss_dssp THHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHGGGGGGG-CCCCCHHHHHGGGCSSHHHHHHHHHHHHHHHHHHC-----
17736 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhcHHHHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC-----
17737 Confidence 344555556666777888888888888876533221111 12355666666666667788888888877765422
17738
17739
17740 Q NP_000290.2 325 TRRQNGI--REAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
17741 Q Consensus 325 ll~~~IL--~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
17742 ...++ +.+...+. +.++.++..++.++..++..
17743 T Consensus 133 --~~~~~~~~~l~~~l~-~~~~~~r~~~~~~l~~l~~~ 167 (240)
17744 T 4QMJ_A 133 --MKEWLEGEDLSEELK-KENPFLRQELLGWLAEKLPT 167 (240)
17745 T ss_dssp --SHHHHSSSHHHHHHH-SSCHHHHHHHHHHHHHHGGG
17746 T ss_pred --hhHhccHHHHHHHHh-cCCHHHHHHHHHHHHHHHHh
17747 Confidence 11244 55566665 55677888888888877653
17748
17749
17750 No 452
17751 >2IX8_A ELONGATION FACTOR 3A; NUCLEOTIDE-BINDING, PROTEIN BIOSYNTHESIS, PHOSPHORYLATION, ELONGATION; 6.0A {SACCHAROMYCES CEREVISIAE}
17752 Probab=75.43 E-value=0.22 Score=54.34 Aligned_cols=153 Identities=11% Similarity=0.112 Sum_probs=91.2 Template_Neff=11.800
17753
17754 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
17755 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
17756 .++.|+..+..+.++.++..++.+|..++..... .... .-..+++.|..++.+.+..++..|+.+|..++...
17757 T Consensus 128 ~l~~l~~~l~~~~~~~vr~~al~~L~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 201 (976)
17758 T 2IX8_A 128 LLPHLTNAIVETNKWQEKIAILAAFSAMVDAAKD-----QVAL-RMPELIPVLSETMWDTKKEVKAAATAAMTKATETVD 201 (976)
17759 T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHSHH-----HHHH-HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHSTTCC
17760 T ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH-----hHHh-hchhHHHHHHHhhcCCCHHHHHHHHHHHHHHHHhcC
17761 Confidence 4556666662135667778888888888754221 1111 12356777778887778888888888888877531
17762
17763
17764 Q NP_000290.2 627 -LL-H----RVMG-----------------------------NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
17765 Q Consensus 627 -e~-~----~ll~-----------------------------~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
17766 .. . .++. ..+++.+...+.+ .++.++..++.+|..++..
17767 T Consensus 202 ~~~~~~~~~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~~~l~~------~~~~vr~~a~~~L~~l~~~ 275 (976)
17768 T 2IX8_A 202 NKDIERFIPSLIQCIADPTEVPETVHLLGATTFVAEVTPATLSIMVPLLSRGLNE------RETGIKRKSAVIIDNMCKL 275 (976)
17769 T ss_dssp SSTTCCCHHHHHHHHHCGGGHHHHHHHCSCTTCCSCCCHHHHHHHHHHHHHHHTS------SSHHHHHHHHHHHHHHHTT
17770 T ss_pred cHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhccCCchhHHHHHHHHHccCCC------CChhHHHHHHHHHHHHHHH
17771 Confidence 00 0 0000 0233344444443 3567888888888888764
17772
17773
17774 Q NP_000290.2 672 QPQLAK-QYFSSSMLNNIINLCRSSAS-PKAAEAARLLLSDMWS 713 (747)
17775 Q Consensus 672 s~e~~~-~Lve~giL~~Ll~LL~s~~d-~eVr~aAL~aLsnL~~ 713 (747)
17776 .+.... .-....+++.|...+.+. + +.++..++.+|..++.
17777 T Consensus 276 ~~~~~~~~~~~~~~~~~l~~~l~d~-~~~~vr~~a~~~l~~l~~ 318 (976)
17778 T 2IX8_A 276 VEDPQVIAPFLGKLLPGLKSNFATI-ADPEAREVTLRALKTLRR 318 (976)
17779 T ss_dssp CCCHHHHHHHHTTTHHHHHHHHHHC-CCHHHHHHHHHHHHHHHH
17780 T ss_pred cCCHHHHHHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHH
17781 Confidence 211110 001123566677777665 5 7888899999988865
17782
17783
17784 No 453
17785 >5XAH_A Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
17786 Probab=75.38 E-value=0.21 Score=46.90 Aligned_cols=162 Identities=12% Similarity=0.072 Sum_probs=86.9 Template_Neff=12.900
17787
17788 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSG--------MSQLIGLKEKGLPQIARLLQS-GNSDVVRSGASL 618 (747)
17789 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~--------~~~~llie~giI~~Ll~LL~s-~d~eVr~~AL~a 618 (747)
17790 +++.++..+. +.++.++..++.+|..++..... ... ..... .-..+++.+...+.+ .++.++..++.+
17791 T Consensus 33 i~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 109 (416)
17792 T 5XAH_A 33 VFEEVFKLLE-CPHLNVRKAAHEALGQFCCALHK-ACQSCPSEPNTAALQA-ALARVVPSYMQAVNRERERQVVMAVLEA 109 (416)
17793 T ss_dssp HHHHHHGGGS-CSCHHHHHHHHHHHHHHHHHHHH-HHTTSCCHHHHHHHHH-HHHHHHHHHHHHHTTCCCHHHHHHHHHH
17794 T ss_pred HHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH-HhccCCCCCCcHHHHH-HHHHHHHHHHHHHhhccHHHHHHHHHHH
17795 Confidence 4566667776 46778888999999888764211 000 00000 112455666666655 567788889999
17796
17797
17798 Q NP_000290.2 619 LSNMSRHPLLH-R---VMGNQVFPEVTRLLTSHTG--------------NTSNSEDILSSACYTVRNLMASQ-PQLAKQY 679 (747)
17799 Q Consensus 619 LsnLa~~~e~~-~---ll~~giI~~Ll~LL~s~s~--------------~~~~d~eVr~~Al~aLsnLa~~s-~e~~~~L 679 (747)
17800 |..++...... . .....+++.+...+..... ....++.++..++.++..++... +.....+
17801 T Consensus 110 l~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~ 189 (416)
17802 T 5XAH_A 110 LTGVLRSCGTLTLKPPGRLAELCGVLKAVLQRKTACQDTDEEEEEEDDDQAEYDAMLLEHAGEAIPALAAAAGGDSFAPF 189 (416)
17803 T ss_dssp HHHHHHHTTHHHHCSTTHHHHHHHHHHHHHTTCSTTC-------------CHHHHHHHHHHHHHHHHHHHHHTSTTTHHH
17804 T ss_pred HHHHHHHhcccccCCccHHHHHHHHHHHHHhccchhcCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHhCccchHHH
17805 Confidence 98887652111 0 1112345555555543100 00004567778888888887642 1111111
17806
17807
17808 Q NP_000290.2 680 FSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
17809 Q Consensus 680 ve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
17810 + ..+++.+...+....+..++..++.++..++.
17811 T Consensus 190 ~-~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~ 222 (416)
17812 T 5XAH_A 190 F-AGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQ 222 (416)
17813 T ss_dssp H-HHHHHHHHHTTSSSSCHHHHHHHHHHHHHHHH
17814 T ss_pred H-HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
17815 Confidence 1 13455555555433135666777777776664
17816
17817
17818 No 454
17819 >5XAH_C Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
17820 Probab=75.38 E-value=0.21 Score=46.90 Aligned_cols=162 Identities=12% Similarity=0.072 Sum_probs=86.9 Template_Neff=12.900
17821
17822 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSG--------MSQLIGLKEKGLPQIARLLQS-GNSDVVRSGASL 618 (747)
17823 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~--------~~~~llie~giI~~Ll~LL~s-~d~eVr~~AL~a 618 (747)
17824 +++.++..+. +.++.++..++.+|..++..... ... ..... .-..+++.+...+.+ .++.++..++.+
17825 T Consensus 33 i~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 109 (416)
17826 T 5XAH_C 33 VFEEVFKLLE-CPHLNVRKAAHEALGQFCCALHK-ACQSCPSEPNTAALQA-ALARVVPSYMQAVNRERERQVVMAVLEA 109 (416)
17827 T ss_dssp HHHHHHHGGG-SSCHHHHHHHHHHHHHHHHHHHH-HHHHSCCHHHHHHHHH-HHHHHHHHHHHHHHHCCCHHHHHHHHHH
17828 T ss_pred HHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH-HhccCCCCCCcHHHHH-HHHHHHHHHHHHHhhccHHHHHHHHHHH
17829 Confidence 4566667776 46778888999999888764211 000 00000 112455666666655 567788889999
17830
17831
17832 Q NP_000290.2 619 LSNMSRHPLLH-R---VMGNQVFPEVTRLLTSHTG--------------NTSNSEDILSSACYTVRNLMASQ-PQLAKQY 679 (747)
17833 Q Consensus 619 LsnLa~~~e~~-~---ll~~giI~~Ll~LL~s~s~--------------~~~~d~eVr~~Al~aLsnLa~~s-~e~~~~L 679 (747)
17834 |..++...... . .....+++.+...+..... ....++.++..++.++..++... +.....+
17835 T Consensus 110 l~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~ 189 (416)
17836 T 5XAH_C 110 LTGVLRSCGTLTLKPPGRLAELCGVLKAVLQRKTACQDTDEEEEEEDDDQAEYDAMLLEHAGEAIPALAAAAGGDSFAPF 189 (416)
17837 T ss_dssp HHHHHHHHGGGGSCSTTHHHHHHHHHHHHHHTCSTTTC-----------CTTHHHHHHHHHHTHHHHHHHHHTSTTTHHH
17838 T ss_pred HHHHHHHhcccccCCccHHHHHHHHHHHHHhccchhcCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHhCccchHHH
17839 Confidence 98887652111 0 1112345555555543100 00004567778888888887642 1111111
17840
17841
17842 Q NP_000290.2 680 FSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
17843 Q Consensus 680 ve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
17844 + ..+++.+...+....+..++..++.++..++.
17845 T Consensus 190 ~-~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~ 222 (416)
17846 T 5XAH_C 190 F-AGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQ 222 (416)
17847 T ss_dssp H-HHHHHHHHHTTSTTSCHHHHHHHHHHHHHHHH
17848 T ss_pred H-HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
17849 Confidence 1 13455555555433135666777777776664
17850
17851
17852 No 455
17853 >5H2V_A Importin subunit beta-3, Ubiquitin-like-specific protease; nuclear import, PROTEIN TRANSPORT-HYDROLASE complex; 2.8A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
17854 Probab=75.07 E-value=0.22 Score=53.62 Aligned_cols=154 Identities=16% Similarity=0.115 Sum_probs=91.6 Template_Neff=13.000
17855
17856 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
17857 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
17858 .++.+...+. +.++.++..++.+|..++..... .... .-..+++.+...+.+.++.++..++.++..++...
17859 T Consensus 357 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 429 (1078)
17860 T 5H2V_A 357 LFQYLQQMIT-STEWRERFAAMMALSSAAEGCAD-----VLIG-EIPKILDMVIPLINDPHPRVQYGCCNVLGQISTDFS 429 (1078)
17861 T ss_dssp HHHHHHHHTT-CSCHHHHHHHHHHHHHHTTTTHH-----HHTT-SHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTT
17862 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhccHH-----HHHh-hHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhcc
17863 Confidence 4555555565 35677888888888888764321 1111 11356666777777777889999999999988652
17864
17865
17866 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
17867 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
17868 .. .......+++.+...+.+. .++.++..++.+|..++...........-..++..+...+.+. ++.++..++
17869 T Consensus 430 ~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~ 503 (1078)
17870 T 5H2V_A 430 PFIQRTAHDRILPALISKLTSE-----CTSRVQTHAAAALVNFSEFASKDILEPYLDSLLTNLLVLLQSN-KLYVQEQAL 503 (1078)
17871 T ss_dssp THHHHHHHHHHHHHHHHTTSTT-----SCHHHHHHHHHHHHHHHTTCCHHHHGGGHHHHHHHHHHHTTCS-SHHHHHHHH
17872 T ss_pred HHHHHHHHHhHHHHHHHHcccC-----CCHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHhCC-CHHHHHHHH
17873 Confidence 11 1111123555555555431 2567788888888888764321110011123455666666554 567777777
17874
17875
17876 Q NP_000290.2 706 LLLSDMWSS 714 (747)
17877 Q Consensus 706 ~aLsnL~~~ 714 (747)
17878 .++..++..
17879 T Consensus 504 ~~l~~l~~~ 512 (1078)
17880 T 5H2V_A 504 TTIAFIAEA 512 (1078)
17881 T ss_dssp HHHHHHHHH
17882 T ss_pred HHHHHHHHH
17883 Confidence 777776653
17884
17885
17886 No 456
17887 >6OWT_A AP-2 complex subunit alpha, AP-2; AP, HIV, Nef, trafficking, Protein;{Rattus norvegicus}
17888 Probab=74.95 E-value=0.24 Score=54.59 Aligned_cols=140 Identities=16% Similarity=0.153 Sum_probs=90.7 Template_Neff=11.000
17889
17890 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
17891 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
17892 +++.++.++. +.+...+..+..++..+...... ....++..|...+.+.++.++..|+.+|+++.....
17893 T Consensus 75 ~~~~l~~ll~-s~~~~~r~~~~~~l~~l~~~~~~----------~~~~ii~~l~~~l~~~~~~vr~~Al~~l~~~~~~~~ 143 (939)
17894 T 6OWT_A 75 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE----------LIRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 143 (939)
17895 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHccCChH----------HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCHHH
17896 Confidence 3455666776 46667777777777777653221 112456667777777888899999999888764311
17897
17898
17899 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
17900 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
17901 ...+++.+..++ .+ .++.++..++.+|..+....+... .....++.|..++.+. +..++..++
17902 T Consensus 144 -----~~~l~~~l~~~l~~~~------~~~~vR~~a~~~L~~l~~~~~~~~---~~~~~~~~l~~lL~d~-~~~vr~~a~ 208 (939)
17903 T 6OWT_A 144 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDLV---PMGDWTSRVVHLLNDQ-HLGVVTAAT 208 (939)
17904 T ss_pred -----HHHHHHHHHHHHcCCC------CCHHHHHHHHHHHHHHHHHCchhc---ChhhHHHHHHHHhcCC-CHHHHHHHH
17905 Confidence 112444555555 33 367889999999999876433221 1234567777777765 677888888
17906
17907
17908 Q NP_000290.2 706 LLLSDMWS 713 (747)
17909 Q Consensus 706 ~aLsnL~~ 713 (747)
17910 .+|..+..
17911 T Consensus 209 ~~L~~l~~ 216 (939)
17912 T 6OWT_A 209 SLITTLAQ 216 (939)
17913 T ss_pred HHHHHHHH
17914 Confidence 88877765
17915
17916
17917 No 457
17918 >4G3A_B CLIP-associating protein; TOG domain, HEAT repeat, MAP; HET: GOL; 1.994A {Drosophila melanogaster}
17919 Probab=74.93 E-value=0.22 Score=42.89 Aligned_cols=107 Identities=15% Similarity=0.166 Sum_probs=71.3 Template_Neff=12.600
17920
17921 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIA-RLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
17922 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll-~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
17923 .++.++..+. +.+..++..++.+|..+...... ....+++.+. .++.+.++.++..++.++..++...
17924 T Consensus 91 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~----------~~~~~~~~l~~~~l~~~~~~~r~~a~~~l~~l~~~~ 159 (237)
17925 T 4G3A_B 91 VLPHVIDRLG-DSRDTVREKAQLLLRDLMEHRVL----------PPQALIDKLATSCFKHKNAKVREEFLQTIVNALHEY 159 (237)
17926 T ss_dssp HHHHHHHHHT-CSCHHHHHHHHHHHHHHHHTTSS----------CHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH
17927 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHcCCC----------CHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHh
17928 Confidence 5666777776 35667788888888888753111 0123556666 6777777888999999998887652
17929
17930
17931 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
17932 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
17933 .........+++.+...+.+ .++.++..++.++..+...
17934 T Consensus 160 ~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~ 198 (237)
17935 T 4G3A_B 160 GTQQLSVRVYIPPVCALLGD------PTVNVREAAIQTLVEIYKH 198 (237)
17936 T ss_dssp HHHHCCCGGGHHHHHHHTTC------SSHHHHHHHHHHHHHHHHH
17937 T ss_pred CCccccHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHHHHH
17938 Confidence 11111113456667777765 3678899999999988764
17939
17940
17941 No 458
17942 >4XL5_C Green fluorescent protein, bGFP-A; AlphaRep Scaffold, Complex, EGFP, PROTEIN; HET: CRO; 2.0A {Aequorea victoria}
17943 Probab=74.58 E-value=0.23 Score=43.80 Aligned_cols=121 Identities=12% Similarity=0.165 Sum_probs=73.5 Template_Neff=12.400
17944
17945 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
17946 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
17947 .++.+...+. +.++.++..++.++..+... ..++.+...+.+.++.++..++.+|..+...
17948 T Consensus 139 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~----------------~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~-- 199 (263)
17949 T 4XL5_C 139 AVEPLIKALK-DEDPWVRLTAARALGQIGDE----------------RAVEPLIKALKDEDASVRKAAAVALGQIGDE-- 199 (263)
17950 T ss_dssp GHHHHHHHTT-CSSHHHHHHHHHHHHHHCCG----------------GGHHHHHHHTTCSSHHHHHHHHHHHHHHCCG--
17951 T ss_pred hHHHHHHHhh-CCCHHHHHHHHHHHHhhCCH----------------HHHHHHHHHhcCCCHHHHHHHHHHHHHhCCh--
17952 Confidence 4455666666 35667777777777655431 2234455566666677788888877766431
17953
17954
17955 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
17956 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
17957 ..++.+..++.+ .+..++..++.+|..+... ...+.+..++.+. ++.++..++.+
17958 T Consensus 200 -------~~~~~l~~~l~~------~~~~~~~~a~~~l~~~~~~-----------~~~~~l~~~~~~~-~~~vr~~a~~~ 254 (263)
17959 T 4XL5_C 200 -------RAVEPLIKALKD------EDEYVRQRAASALGKIGGE-----------RVRAAMEKLAEPA-PGFARKVAVNY 254 (263)
17960 T ss_dssp -------GGHHHHHHHTTC------SSHHHHHHHHHHHHHHCHH-----------HHHHHHHHHTTTC-CHHHHHHHHHH
17961 T ss_pred -------hhHHHHHHHhcC------CCHHHHHHHHHHHHhhCcH-----------HHHHHHHHHhcCC-CcHHHHHHHHH
17962 Confidence 234455555554 2566777888888776542 2334444555544 66788888888
17963
17964
17965 Q NP_000290.2 708 LSDMW 712 (747)
17966 Q Consensus 708 LsnL~ 712 (747)
17967 |..+.
17968 T Consensus 255 l~~~~ 259 (263)
17969 T 4XL5_C 255 LETHK 259 (263)
17970 T ss_dssp HHHCC
17971 T ss_pred HHHHH
17972 Confidence 77654
17973
17974
17975 No 459
17976 >4FDD_A Transportin-1, RNA-binding protein FUS; HEAT repeats, Karyopherin, nuclear import; 2.3A {Homo sapiens}
17977 Probab=74.48 E-value=0.23 Score=51.35 Aligned_cols=155 Identities=9% Similarity=0.106 Sum_probs=92.6 Template_Neff=13.300
17978
17979 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIG--LKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
17980 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~ll--ie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
17981 .++.+...+. +.++.++..++.+|..+...... ......+ .-..+++.+...+.+.++.++..++.+|..++..
17982 T Consensus 129 ~~~~l~~~l~-~~~~~~~~~al~~l~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 204 (852)
17983 T 4FDD_A 129 LLPKLCSLLD-SEDYNTCEGAFGALQKICEDSAE---ILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIIS 204 (852)
17984 T ss_dssp HHHHHHHHHS-CSSHHHHHHHHHHHHHHHHHHTT---HHHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTT
17985 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHh---hcchhhccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
17986 Confidence 3455555565 35667777888888877753210 0000000 1134566677777777788899999999888765
17987
17988
17989 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
17990 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
17991 ... .......+++.+...+.+ .++.++..++.++..+....+....... ..+++.+...+.+. ++.++..+
17992 T Consensus 205 ~~~~~~~~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~v~~~a 276 (852)
17993 T 4FDD_A 205 RTQALMLHIDSFIENLFALAGD------EEPEVRKNVCRALVMLLEVRMDRLLPHM-HNIVEYMLQRTQDQ-DENVALEA 276 (852)
17994 T ss_dssp TCHHHHTSHHHHHHHHHHHHTC------CCHHHHHHHHHHHHHHHHHCHHHHGGGH-HHHHHHHHHHHTCS-SHHHHHHH
17995 T ss_pred hHHHHHHhHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHcHHHHHHhH-HHHHHHHHHhcCCC-CHHHHHHH
17996 Confidence 211 111112355556666654 3567888899999888765332211111 23456666666655 67788888
17997
17998
17999 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
18000 Q Consensus 705 L~aLsnL~~~ 714 (747)
18001 +.+|..++..
18002 T Consensus 277 ~~~l~~l~~~ 286 (852)
18003 T 4FDD_A 277 CEFWLTLAEQ 286 (852)
18004 T ss_dssp HHHHHHHTTS
18005 T ss_pred HHHHHHHhcC
18006 Confidence 8888887754
18007
18008
18009 No 460
18010 >4D4Z_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE, EIF-5A, HYPUSINE; HET: B3P, GOL; 1.7A {HOMO SAPIENS}
18011 Probab=74.40 E-value=0.23 Score=44.22 Aligned_cols=124 Identities=11% Similarity=0.101 Sum_probs=69.5 Template_Neff=12.700
18012
18013 Q NP_000290.2 546 SDAIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
18014 Q Consensus 546 ~G~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
18015 ...++.|...+. +.+ +.++..++.+|..+.. ...++.+...+.+.++.++..++.+|..+.
18016 T Consensus 9 ~~~~~~l~~~l~-~~~~~~~~r~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~ 71 (294)
18017 T 4D4Z_A 9 EQEVDAIGQTLV-DPKQPLQARFRALFTLRGLGG----------------PGAIAWISQAFDDDSALLKHELAYCLGQMQ 71 (294)
18018 T ss_dssp HHHHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCS----------------HHHHHHHHHGGGCSCHHHHHHHHHHHHHHT
18019 T ss_pred HHHHHHHHHHHc-CCCCCHHHHHHHHHHHHhhcC----------------hhHHHHHHHHhCCCCHHHHHHHHHHHHhcC
18020 Confidence 345666777776 344 4577777777766532 123445556666667777888877777664
18021
18022
18023 Q NP_000290.2 624 RHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
18024 Q Consensus 624 ~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
18025 .. ..++.+..++.+. ..++.++..++.+|..+... ..++.+...+.+. ++.++..
18026 T Consensus 72 ~~---------~~~~~l~~~l~~~----~~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~v~~~ 126 (294)
18027 T 4D4Z_A 72 DA---------RAIPMLVDVLQDT----RQEPMVRHEAGEALGAIGDP-----------EVLEILKQYSSDP-VIEVAET 126 (294)
18028 T ss_dssp CG---------GGHHHHHHHHHCT----TSCHHHHHHHHHHHHHHCCG-----------GGHHHHHHHTTCS-SHHHHHH
18029 T ss_pred Cc---------chHHHHHHHhhCC----CCCHHHHHHHHHHHHHhCCH-----------HHHHHHHHHccCC-CchHHHH
18030 Confidence 31 2334455555441 01456777777777766431 1233444445444 5556666
18031
18032
18033 Q NP_000290.2 704 ARLLLSDM 711 (747)
18034 Q Consensus 704 AL~aLsnL 711 (747)
18035 ++.++..+
18036 T Consensus 127 a~~~l~~~ 134 (294)
18037 T 4D4Z_A 127 CQLAVRRL 134 (294)
18038 T ss_dssp HHHHHHHH
18039 T ss_pred HHHHHHHH
18040 Confidence 65555544
18041
18042
18043 No 461
18044 >4D50_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE; HET: GAI; 1.7A {HOMO SAPIENS}
18045 Probab=74.40 E-value=0.23 Score=44.22 Aligned_cols=124 Identities=11% Similarity=0.101 Sum_probs=69.5 Template_Neff=12.700
18046
18047 Q NP_000290.2 546 SDAIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
18048 Q Consensus 546 ~G~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
18049 ...++.|...+. +.+ +.++..++.+|..+.. ...++.+...+.+.++.++..++.+|..+.
18050 T Consensus 9 ~~~~~~l~~~l~-~~~~~~~~r~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~ 71 (294)
18051 T 4D50_A 9 EQEVDAIGQTLV-DPKQPLQARFRALFTLRGLGG----------------PGAIAWISQAFDDDSALLKHELAYCLGQMQ 71 (294)
18052 T ss_dssp HHHHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCS----------------HHHHHHHHHGGGSSCHHHHHHHHHHHHHHT
18053 T ss_pred HHHHHHHHHHHc-CCCCCHHHHHHHHHHHHhhcC----------------hhHHHHHHHHhCCCCHHHHHHHHHHHHhcC
18054 Confidence 345666777776 344 4577777777766532 123445556666667777888877777664
18055
18056
18057 Q NP_000290.2 624 RHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
18058 Q Consensus 624 ~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
18059 .. ..++.+..++.+. ..++.++..++.+|..+... ..++.+...+.+. ++.++..
18060 T Consensus 72 ~~---------~~~~~l~~~l~~~----~~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~v~~~ 126 (294)
18061 T 4D50_A 72 DA---------RAIPMLVDVLQDT----RQEPMVRHEAGEALGAIGDP-----------EVLEILKQYSSDP-VIEVAET 126 (294)
18062 T ss_dssp CG---------GGHHHHHHHHHCT----TSCHHHHHHHHHHHHHHCCG-----------GGHHHHHHHTTCS-SHHHHHH
18063 T ss_pred Cc---------chHHHHHHHhhCC----CCCHHHHHHHHHHHHHhCCH-----------HHHHHHHHHccCC-CchHHHH
18064 Confidence 31 2334455555441 01456777777777766431 1233444445444 5556666
18065
18066
18067 Q NP_000290.2 704 ARLLLSDM 711 (747)
18068 Q Consensus 704 AL~aLsnL 711 (747)
18069 ++.++..+
18070 T Consensus 127 a~~~l~~~ 134 (294)
18071 T 4D50_A 127 CQLAVRRL 134 (294)
18072 T ss_dssp HHHHHHHH
18073 T ss_pred HHHHHHHH
18074 Confidence 65555544
18075
18076
18077 No 462
18078 >6QH5_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
18079 Probab=74.19 E-value=0.24 Score=50.25 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=49.1 Template_Neff=12.200
18080
18081 Q NP_000290.2 548 AIRTYLNLM--GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
18082 Q Consensus 548 ~I~~LL~LL--~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
18083 .++.+...+ . +.++.++..++.+|..+....+. .......++.+..++.+.++.++..++.+|..+...
18084 T Consensus 147 l~~~l~~~l~~~-~~~~~vr~~a~~~L~~l~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~L~~l~~~ 217 (621)
18085 T 6QH5_A 147 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRTSPD--------LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 217 (621)
18086 T ss_pred HHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHhChH--------HccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
18087 Confidence 355566666 5 46778888999999988764221 111245677788888888888999999999888764
18088
18089
18090 No 463
18091 >5LPH_B Centrosomal protein of 104 kDa; TOG domain, HEAT repeat, Tubulin; HET: MSE; 2.25A {Homo sapiens}
18092 Probab=74.03 E-value=0.26 Score=45.88 Aligned_cols=155 Identities=10% Similarity=0.057 Sum_probs=88.9 Template_Neff=10.900
18093
18094 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLM---SSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
18095 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~---s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
18096 ++.+...+. +.+..++..++.++..++...... ... .... .-..+++.|+..+.+.++.++..+..+|..++..
18097 T Consensus 94 ~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~~~~~~~~-~~~~-~l~~ll~~ll~~l~d~~~~vr~~a~~~l~~l~~~ 170 (288)
18098 T 5LPH_B 94 VFLVRRAIK-DIVTSVFQASLKLLKMIITQYIPKHKLSKL-ETAH-CVERTIPVLLTRTGDSSARLRVTAANFIQEMALF 170 (288)
18099 T ss_pred HHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHcccCCCCHH-HHHH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHcC
18100 Confidence 444555565 466778888888888776532000 000 0011 1234667777777777788888899888888765
18101
18102
18103 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
18104 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
18105 ..... ...++..+...+... .++.++..++.+|..++...........-..+++.+...+.+. +..+|..+.
18106 T Consensus 171 ~~~~~--~~~v~~~l~~~l~~~-----~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~i~~~l~~~l~~~-~~~VR~~a~ 242 (288)
18107 T 5LPH_B 171 KEVKS--LQIIPSYLVQPLKAN-----SSVHLAMSQMGLLARLLKDLGTGSSGFTIDNVMKFSVSALEHR-VYEVRETAV 242 (288)
18108 T ss_pred CCCCc--hhhHHHHHhhccccC-----CCHHHHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHhCCC-CHHHHHHHH
18109 Confidence 21100 011223332333321 2466777788888877654322111111224567777777766 789999999
18110
18111
18112 Q NP_000290.2 706 LLLSDMWSS 714 (747)
18113 Q Consensus 706 ~aLsnL~~~ 714 (747)
18114 .++..+...
18115 T Consensus 243 ~~l~~l~~~ 251 (288)
18116 T 5LPH_B 243 RIILDMYRQ 251 (288)
18117 T ss_pred HHHHHHHHH
18118 Confidence 998887653
18119
18120
18121 No 464
18122 >1QBK_B STRUCTURE OF THE KARYOPHERIN BETA2-RAN; HEAT REPEATS, NUCLEAR TRANSPORT PROTEIN; HET: GNP; 3.0A {Homo sapiens} SCOP: a.118.1.1
18123 Probab=73.90 E-value=0.24 Score=51.58 Aligned_cols=156 Identities=9% Similarity=0.104 Sum_probs=93.2 Template_Neff=13.200
18124
18125 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLI--GLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
18126 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~l--lie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
18127 .++.+...+. +.++.++..++.+|..++..... ...... -.-..+++.+...+.+.++.++..++.+|..+...
18128 T Consensus 129 ~~~~l~~~l~-~~~~~~~~~al~~l~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 204 (890)
18129 T 1QBK_B 129 LLPKLCSLLD-SEDYNTCEGAFGALQKICEDSAE---ILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIIS 204 (890)
18130 T ss_pred HHHHHHHHhc-CCChhHHHHHHHHHHHHHHHHHH---hcchhhccHhHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
18131 Confidence 4555666665 35667777888888887754221 000000 01134566677777777788899999999988765
18132
18133
18134 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
18135 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
18136 ... .......+++.+...+.+ .+..++..++.+|..++...+....... ..+++.+...+.+. ++.++..+
18137 T Consensus 205 ~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~v~~~a 276 (890)
18138 T 1QBK_B 205 RTQALMLHIDSFTENLFALAGD------EEPEVRKNVCRALVMLLEVRMDRLLPHM-HNIVEYMLQRTQDQ-DENVALEA 276 (890)
18139 T ss_pred hcHHHHHcHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHhCHHHHHHhH-HHHHHHHHHHhcCC-CHHHHHHH
18140 Confidence 211 111112345555555554 2567788888888888765332221111 23456666666655 67788888
18141
18142
18143 Q NP_000290.2 705 RLLLSDMWSSK 715 (747)
18144 Q Consensus 705 L~aLsnL~~~~ 715 (747)
18145 +.++..+....
18146 T Consensus 277 ~~~l~~l~~~~ 287 (890)
18147 T 1QBK_B 277 CEFWLTLAEQP 287 (890)
18148 T ss_pred HHHHHHHhcCh
18149 Confidence 88888887653
18150
18151
18152 No 465
18153 >3W3W_A Importin subunit beta-3, Protein STE12; HEAT repeat, nuclear import, PROTEIN; 2.2A {Saccharomyces cerevisiae}
18154 Probab=73.86 E-value=0.24 Score=53.17 Aligned_cols=153 Identities=16% Similarity=0.154 Sum_probs=90.7 Template_Neff=13.000
18155
18156 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
18157 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
18158 .++.+...+. +.++.++..++.+|..++..... .... .-..+++.+...+.+.++.++..++.++..++.. .
18159 T Consensus 357 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 429 (1078)
18160 T 3W3W_A 357 LFQYLQQMIT-STEWRERFAAMMALSSAAEGCAD-----VLIG-EIPKILDMVIPLINDPHPRVQYGCCNVLGQISTDFS 429 (1078)
18161 T ss_dssp HHHHHHHHHT-CSCHHHHHHHHHHHHHHTTTTHH-----HHTT-CHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTT
18162 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhccHH-----HHHh-hHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcc
18163 Confidence 4455555555 35677888888888888764221 1111 1135666677777777788999999999998865 1
18164
18165
18166 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
18167 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
18168 .. .......+++.+...+.+. .+..++..++.+|..++..... ..... -..++..+...+.+. +..++..+
18169 T Consensus 430 ~~~~~~~~~~~~~~l~~~l~~~-----~~~~~r~~a~~~l~~l~~~~~~~~~~~~-~~~i~~~l~~~l~~~-~~~~~~~~ 502 (1078)
18170 T 3W3W_A 430 PFIQRTAHDRILPALISKLTSE-----CTSRVQTHAAAALVNFSEFASKDILEPY-LDSLLTNLLVLLQSN-KLYVQEQA 502 (1078)
18171 T ss_dssp THHHHHHHHHHHHHHHHHTSTT-----SCHHHHHHHHHHHHHHHHTCCHHHHGGG-HHHHHHHHHHHHTCS-SHHHHHHH
18172 T ss_pred HHHHHHHHHHHHHHHHHHcccC-----CCHHHHHHHHHHHHHHHhcCChhhHHHH-HHHHHHHHHHHHhcC-CHHHHHHH
18173 Confidence 11 1011123555555555431 2567788888888888764321 11111 123455666666544 56677777
18174
18175
18176 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
18177 Q Consensus 705 L~aLsnL~~~ 714 (747)
18178 +.++..++..
18179 T Consensus 503 ~~~l~~l~~~ 512 (1078)
18180 T 3W3W_A 503 LTTIAFIAEA 512 (1078)
18181 T ss_dssp HHHHHHHHHH
18182 T ss_pred HHHHHHHHHH
18183 Confidence 7777776643
18184
18185
18186 No 466
18187 >1IBR_B RAN IMPORTIN BETA SUBUNIT; SMALL GTPASE NUCLEAR TRANSPORT; HET: GNP; 2.3A {Homo sapiens} SCOP: a.118.1.1
18188 Probab=73.63 E-value=0.25 Score=47.09 Aligned_cols=158 Identities=12% Similarity=0.052 Sum_probs=89.8 Template_Neff=12.900
18189
18190 Q NP_000290.2 547 DAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSS------G-MSQLIGLKEKGLPQIARLLQSGNSDVVRSGASL 618 (747)
18191 Q Consensus 547 G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~------~-~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~a 618 (747)
18192 +.++.++.++.+. .++.++..|+.+|.++...... .. . .....-....+.+.++..+.+. +.++..++.+
18193 T Consensus 35 ~~~~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~-~~~~~~~~~~ 112 (462)
18194 T 1IBR_B 35 TFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDP-DIKAQYQQRWLAIDANARREVKNYVLQTLGTE-TYRPSSASQC 112 (462)
18195 T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSH-HHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCC-CSSSCSHHHH
18196 T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcCCH-HHHHHHHHhHhcCCHHHHHHHHHHHHHHHCCC-CCChhHHHHH
18197 Confidence 4566677777621 3567888888888887653210 00 0 0000001123445555555442 3457777788
18198
18199
18200 Q NP_000290.2 619 LSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNS--EDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
18201 Q Consensus 619 LsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d--~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
18202 ++.++...... .....+++.+...+.+ .+ +.++..++.+|..+...............+++.+...+.+.
18203 T Consensus 113 l~~l~~~~~~~-~~~~~~~~~l~~~l~~------~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 184 (462)
18204 T 1IBR_B 113 VAGIACAEIPV-NQWPELIPQLVANVTN------PNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKE- 184 (462)
18205 T ss_dssp HHHHHHHHGGG-TCCTTHHHHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTT-
18206 T ss_pred HHHHHhhcCCh-hhcccHHHHHHHHhhC------CCCchHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC-
18207 Confidence 88777541110 0112356666666665 23 67888899999888764322111111224567777777765
18208
18209
18210 Q NP_000290.2 697 S--PKAAEAARLLLSDMWSS 714 (747)
18211 Q Consensus 697 d--~eVr~aAL~aLsnL~~~ 714 (747)
18212 + ..++..++.++..++..
18213 T Consensus 185 ~~~~~vr~~a~~~l~~l~~~ 204 (462)
18214 T 1IBR_B 185 EPSNNVKLAATNALLNSLEF 204 (462)
18215 T ss_dssp CCCHHHHHHHHHHHHHHTTT
18216 T ss_pred CCCHHHHHHHHHHHHHHHHH
18217 Confidence 4 78889999999888654
18218
18219
18220 No 467
18221 >5VCH_A Kap123; Bidding yeast karyopherin, 23 HEAT; HET: MSE; 2.35A {Kluyveromyces lactis}
18222 Probab=73.42 E-value=0.26 Score=53.37 Aligned_cols=153 Identities=15% Similarity=0.124 Sum_probs=92.7 Template_Neff=12.900
18223
18224 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
18225 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
18226 .++.+...+. +.++.++..++.+|..++..... ..... -..+++.+...+.+.++.++..++.++..++...
18227 T Consensus 361 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 433 (1116)
18228 T 5VCH_A 361 IIEHLPTMLS-SSNPFERRSILLAISVLVTGSPD-----YTLSQ-FDKIIPATVTGLKDSEAVVQLAALKCIVQLSTNLQ 433 (1116)
18229 T ss_dssp HHHHHHHHHH-CSCHHHHHHHHHHHHHHTTTCHH-----HHHHT-HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSH
18230 T ss_pred HHHHHHHHhh-CCCHHHHHHHHHHHHHHHhcCHH-----HHHHh-HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcH
18231 Confidence 4555566665 35677788888888888764321 11111 1356677777777777889999999999888652
18232
18233
18234 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINLCRS-SASPKAAEAA 704 (747)
18235 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~LL~s-~~d~eVr~aA 704 (747)
18236 .........+++.+...+... .+..++..++.+|..++..... ...... ..+++.+...+.+ . ++.++..+
18237 T Consensus 434 ~~~~~~~~~~~~~l~~~l~~~-----~~~~v~~~a~~~l~~l~~~~~~~~~~~~~-~~~~~~l~~~l~~~~-~~~~~~~~ 506 (1116)
18238 T 5VCH_A 434 DEVARYHEQYLPLVIDIIDSA-----KHVVIYKYATLALDGLLEFIAHNDIIKYL-DPLMNKLFQMLETQQ-SPKLRAAI 506 (1116)
18239 T ss_dssp HHHHTTHHHHHHHHHHHHHTC-----CSHHHHHHHHHHHHHHHHTSCHHHHHHHH-HHHHHHHHHHHHHCC-CHHHHHHH
18240 T ss_pred HHHHHHHHHHHHHHHHHhccC-----CCHHHHHHHHHHHHHHHhhCCHhhHHHHH-HHHHHHHHHHHhcCC-CHHHHHHH
18241 Confidence 111111123555566665541 2567788888888888764222 111111 2356666666665 3 56777778
18242
18243
18244 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
18245 Q Consensus 705 L~aLsnL~~~ 714 (747)
18246 +.++..++..
18247 T Consensus 507 ~~~l~~l~~~ 516 (1116)
18248 T 5VCH_A 507 VSAIGSCAFA 516 (1116)
18249 T ss_dssp HHHHHHHHHH
18250 T ss_pred HHHHHHHHHH
18251 Confidence 8888777653
18252
18253
18254 No 468
18255 >6QH7_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: SEP; 3.4A {Rattus norvegicus}
18256 Probab=73.36 E-value=0.26 Score=49.97 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=49.2 Template_Neff=12.200
18257
18258 Q NP_000290.2 548 AIRTYLNLM--GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
18259 Q Consensus 548 ~I~~LL~LL--~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
18260 .++.+...+ . +.++.++..++.+|..+....+. .......++.|..++.+.++.++..++.+|..+...
18261 T Consensus 147 l~~~l~~~l~~~-~~~~~vr~~a~~~L~~~~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 217 (621)
18262 T 6QH7_A 147 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRTSPD--------LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 217 (621)
18263 T ss_dssp HTTHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHCGG--------GCCCCTTHHHHHHGGGCSSHHHHHHHHHHHHHHHTT
18264 T ss_pred HHhhHHHHHHcC-CCCHHHHHHHHHHHHHHHHHChh--------hcCccchHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
18265 Confidence 455566666 5 46778888999999988764221 111245677788888888888999999999888764
18266
18267
18268 No 469
18269 >2JKT_A AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ALTERNATIVE SPLICING, PHOSPHOPROTEIN, PHOSPHORYLATION, PROTEIN; HET: SEP, SO4; 3.4A {MUS MUSCULUS}
18270 Probab=73.28 E-value=0.27 Score=49.85 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=49.0 Template_Neff=12.300
18271
18272 Q NP_000290.2 548 AIRTYLNLM--GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
18273 Q Consensus 548 ~I~~LL~LL--~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
18274 .++.+...+ . +.++.++..++.+|..+....+. .......++.|..++.+.++.++..++.+|..+...
18275 T Consensus 147 l~~~l~~~l~~~-~~~~~vr~~a~~~L~~~~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 217 (623)
18276 T 2JKT_A 147 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRTSPD--------LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 217 (623)
18277 T ss_dssp HTTHHHHHHHCT-TSCHHHHHHHHHHHHHHHHHCTT--------TCCCCTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTT
18278 T ss_pred HHHhHHHHHHcC-CCCHHHHHHHHHHHHHHHHHChh--------hcCccchHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
18279 Confidence 345566666 5 46778888999999888764221 111245677888888888888999999999888764
18280
18281
18282 No 470
18283 >1GCJ_B IMPORTIN-BETA; HEAT REPEAT MOTIF, NUCLEAR PORE-TARGETING; HET: MSE; 2.6A {Mus musculus} SCOP: a.118.1.1
18284 Probab=73.02 E-value=0.27 Score=46.99 Aligned_cols=158 Identities=12% Similarity=0.055 Sum_probs=87.6 Template_Neff=12.800
18285
18286 Q NP_000290.2 547 DAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSS------G-MSQLIGLKEKGLPQIARLLQSGNSDVVRSGASL 618 (747)
18287 Q Consensus 547 G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~------~-~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~a 618 (747)
18288 +.+..++..+.++ .+..++..|+.+|.++...... .. . .....-....+.+.|+..+.+. ..++..++.+
18289 T Consensus 41 ~~~~~l~~~l~~~~~~~~~r~~a~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~l~~~l~~~-~~~r~~~~~~ 118 (460)
18290 T 1GCJ_B 41 TFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDP-DIKAQYQQRWLAIDANARREVKNYVLQTLGTE-TYRPSSASQC 118 (460)
18291 T ss_dssp HHHHHHHHHHSCTTSCHHHHHHHHHHHHTTTCCSSH-HHHHHHHHHHHHSCHHHHHHHHHHHHHHTTCC-CSSSCHHHHH
18292 T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHcCC-CCChhHHHHH
18293 Confidence 3455666666521 2456777777888876643110 00 0 0000001233455566666543 3477778888
18294
18295
18296 Q NP_000290.2 619 LSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNS--EDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
18297 Q Consensus 619 LsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d--~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
18298 +..++...... .....+++.+...+.+ .+ +.++..++.+|..+...............+++.+...+.+.
18299 T Consensus 119 l~~l~~~~~~~-~~~~~~~~~l~~~l~~------~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 190 (460)
18300 T 1GCJ_B 119 VAGIACAEIPV-SQWPELIPQLVANVTN------PNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKE- 190 (460)
18301 T ss_dssp HHHHHHHHGGG-TCCTTHHHHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHCTT-
18302 T ss_pred HHHHHHHhCCc-cccchHHHHHHHHhhC------CCCcHHHHHHHHHHHHHHhhhCCHHHhHHHHHHHHHHHHHHHhCC-
18303 Confidence 88777541111 0112356666666665 23 67888899999888764221111111224566777777655
18304
18305
18306 Q NP_000290.2 697 S--PKAAEAARLLLSDMWSS 714 (747)
18307 Q Consensus 697 d--~eVr~aAL~aLsnL~~~ 714 (747)
18308 + ..++..++.++..+...
18309 T Consensus 191 ~~~~~vr~~a~~~l~~~~~~ 210 (460)
18310 T 1GCJ_B 191 EPSNNVKLAATNALLNSLEF 210 (460)
18311 T ss_dssp CSCHHHHHHHHHHHHHHTTT
18312 T ss_pred CCCHHHHHHHHHHHHHHHHH
18313 Confidence 4 78888888888887653
18314
18315
18316 No 471
18317 >1OYZ_A X-RAY STRUCTURE OF YB61_HAEIN NORTHEAST; STRUCTURAL GENOMICS, PSI, Protein Structure; 2.1A {Escherichia coli} SCOP: a.118.1.16
18318 Probab=72.96 E-value=0.27 Score=43.42 Aligned_cols=121 Identities=14% Similarity=0.056 Sum_probs=74.4 Template_Neff=12.700
18319
18320 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
18321 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
18322 ..++.+...+. +.++.++..++.++..+.... ...++.+...+.+.++.++..++.+|..+...
18323 T Consensus 159 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~--------------~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~- 222 (280)
18324 T 1OYZ_A 159 ATIPLLINLLK-DPNGDVRNWAAFAININKYDN--------------SDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDK- 222 (280)
18325 T ss_dssp CCHHHHHHHHT-CSSHHHHHHHHHHHHHHTCCC--------------HHHHHHHHHHTTCSCHHHHHHHHHHHHHTTCG-
18326 T ss_pred hhHHHHHHHHc-CCCHHHHHHHHHHHHhhcCCC--------------hHHHHHHHHHhcCCCHHHHHHHHHHHhccCCh-
18327 Confidence 34566677776 356677777777776553321 13455566667777778888888888776532
18328
18329
18330 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
18331 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
18332 ..++.+...+.+ +.++..++.+|..+... ..++.|...+.+..++.++..++.
18333 T Consensus 223 --------~~~~~l~~~l~~--------~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~~~~~vr~~a~~ 275 (280)
18334 T 1OYZ_A 223 --------RVLSVLCDELKK--------NTVYDDIIEAAGELGDK-----------TLLPVLDTMLYKFDDNEIITSAID 275 (280)
18335 T ss_dssp --------GGHHHHHHHHTS--------SSCCHHHHHHHHHHCCG-----------GGHHHHHHHHTTSSCCHHHHHHHH
18336 T ss_pred --------hHHHHHHHHhCC--------ccHHHHHHHHHHHhcch-----------hHHHHHHHHHhcCCCHHHHHHHHH
18337 Confidence 234444455543 25677777777776531 245566666665226677888877
18338
18339
18340 Q NP_000290.2 707 LLSD 710 (747)
18341 Q Consensus 707 aLsn 710 (747)
18342 +|..
18343 T Consensus 276 ~l~~ 279 (280)
18344 T 1OYZ_A 276 KLKR 279 (280)
18345 T ss_dssp HHTC
18346 T ss_pred HHhc
18347 Confidence 7764
18348
18349
18350 No 472
18351 >2JKT_A AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ALTERNATIVE SPLICING, PHOSPHOPROTEIN, PHOSPHORYLATION, PROTEIN; HET: SEP, SO4; 3.4A {MUS MUSCULUS}
18352 Probab=72.80 E-value=0.28 Score=49.69 Aligned_cols=67 Identities=12% Similarity=0.101 Sum_probs=35.9 Template_Neff=12.300
18353
18354 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNMS 623 (747)
18355 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsnLa 623 (747)
18356 .++.+..++. +.+..++..++.+|..+...... ... -...++.++..+. +.++.++..++.+|..+.
18357 T Consensus 330 ~~~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~------~~~--~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~ 397 (623)
18358 T 2JKT_A 330 ACNQLGQFLQ-HRETNLRYLALESMCTLASSEFS------HEA--VKTHIETVINALKTERDVSVRQRAVDLLYAMC 397 (623)
18359 T ss_dssp HHHHHHHHHH-SSCSHHHHHHHHHHHHHTTCSSS------CSG--GGGGHHHHHHHHHHCCSHHHHHHHHHHHHTTC
18360 T ss_pred HHHHHHHHhh-CCCchHHHHHHHHHHHHHcCcCC------HHH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc
18361 Confidence 3455556665 35566677777777766643210 011 1123445555555 555666666666666653
18362
18363
18364 No 473
18365 >5VE8_B Kap123, Histone H3; Bidding yeast karyopherin, 23 HEAT; HET: MSE; 2.7A {Kluyveromyces lactis}
18366 Probab=72.66 E-value=0.27 Score=53.10 Aligned_cols=153 Identities=15% Similarity=0.129 Sum_probs=92.5 Template_Neff=12.900
18367
18368 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
18369 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
18370 .++.+...+. +.++.++..++.+|..++..... ..... -..+++.+...+.+.++.++..++.++..++....
18371 T Consensus 361 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 433 (1116)
18372 T 5VE8_B 361 IIEHLPTMLS-SSNPFERRSILLAISVLVTGSPD-----YTLSQ-FDKIIPATVTGLKDSEAVVQLAALKCIVQLSTNLQ 433 (1116)
18373 T ss_dssp HHHTHHHHHH-CSCHHHHHHHHHHHHHHHHHCHH-----HHHHT-HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHT
18374 T ss_pred HHHHHHHHhh-CCCHHHHHHHHHHHHHHHhCCHH-----HHHHh-HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcH
18375 Confidence 4555555665 35677788888888888764321 11111 13566777777777788899999999999886521
18376
18377
18378 Q NP_000290.2 628 -LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINLCRS-SASPKAAEAA 704 (747)
18379 Q Consensus 628 -~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~LL~s-~~d~eVr~aA 704 (747)
18380 ........+++.+...+... .+..++..++.+|..++...+. ...... ..+++.+...+.+ . ++.++..+
18381 T Consensus 434 ~~~~~~~~~~~~~l~~~l~~~-----~~~~v~~~a~~~l~~l~~~~~~~~~~~~~-~~~~~~l~~~l~~~~-~~~~~~~~ 506 (1116)
18382 T 5VE8_B 434 DEVARYHEQYLPLVIDIIDSA-----KHVVIYKYATLALDGLLEFIAHNDIIKYL-DPLMNKLFQMLETQQ-SPKLRAAI 506 (1116)
18383 T ss_dssp HHHHTTHHHHHHHHHHHHHTC-----CSHHHHHHHHHHHHHHHHTSCHHHHHHHH-HHHHHHHHHHHHHCC-CHHHHHHH
18384 T ss_pred HHHHHHHHHHHHHHHHHhccC-----CCHHHHHHHHHHHHHHHhhcCHhhHHHHH-HHHHHHHHHHHhcCC-CHHHHHHH
18385 Confidence 11111123555666665541 2567788888888888764222 111111 2356666666665 3 56777778
18386
18387
18388 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
18389 Q Consensus 705 L~aLsnL~~~ 714 (747)
18390 +.++..++..
18391 T Consensus 507 ~~~l~~l~~~ 516 (1116)
18392 T 5VE8_B 507 VSAIGSCAFA 516 (1116)
18393 T ss_dssp HHHHHHHHHH
18394 T ss_pred HHHHHHHHHH
18395 Confidence 8888777653
18396
18397
18398 No 474
18399 >4ZV6_A AlphaRep-7, Octarellin V.1; synthetic gene, artificial protein, Rossmann-like; 2.22A {synthetic construct}
18400 Probab=71.73 E-value=0.3 Score=43.65 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=18.6 Template_Neff=12.500
18401
18402 Q NP_000290.2 685 LNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
18403 Q Consensus 685 L~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
18404 ++.+...+.+. ++.++..++.++..+...
18405 T Consensus 140 ~~~l~~~l~~~-~~~~r~~a~~~l~~~~~~ 168 (294)
18406 T 4ZV6_A 140 VEPLIKALKDE-DPYVRMAAAYALGKIGDE 168 (294)
18407 T ss_pred HHHHHHHhCCC-CHHHHHHHHHHHhhhCCH
18408 Confidence 34455555554 667788888888776543
18409
18410
18411 No 475
18412 >6BZX_A alpha-Rep, Octarellin V.1; protein design, artificial protein, DE; 3.107A {synthetic construct}
18413 Probab=71.39 E-value=0.31 Score=43.56 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=18.5 Template_Neff=12.500
18414
18415 Q NP_000290.2 685 LNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
18416 Q Consensus 685 L~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
18417 ++.+...+.+. ++.++..++.++..+...
18418 T Consensus 140 ~~~l~~~l~~~-~~~~r~~a~~~l~~~~~~ 168 (294)
18419 T 6BZX_A 140 VEPLIKALKDE-DPYVRMAAAYALGKIGDE 168 (294)
18420 T ss_dssp HHHHHHHTTCS-SHHHHHHHHHHHHHHTCG
18421 T ss_pred HHHHHHHhcCC-CHHHHHHHHHHHHHHcch
18422 Confidence 34455555554 667788888887776543
18423
18424
18425 No 476
18426 >5IFE_C Splicing factor 3B subunit 5; pre-mRNA splicing, U2 snRNP, essential; 3.1A {Homo sapiens}
18427 Probab=70.42 E-value=0.38 Score=55.84 Aligned_cols=154 Identities=9% Similarity=0.047 Sum_probs=91.7 Template_Neff=9.800
18428
18429 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
18430 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
18431 +++.|...+.+..++.++..++.+|..++..... .... .-..+++.|...+.+.+..++..++.+|..++...
18432 T Consensus 644 ll~~L~~~l~s~~~~~~r~~al~~L~~l~~~~~~-----~~~~-~l~~ll~~L~~~L~d~~~~VR~~a~~~L~~l~~~~~ 717 (1304)
18433 T 5IFE_C 644 LLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGC-----AILP-HLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAAT 717 (1304)
18434 T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhh-----hchh-hHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCC
18435 Confidence 4455555555222367788888888888753221 0111 11345666777777777889999999999988652
18436
18437
18438 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
18439 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
18440 .. ...+ ..+++.|+..+.+ ....++..++.+|..++..............++..|...+.+. +..++..++
18441 T Consensus 718 ~~~~~~~-~~ll~~Ll~~l~~------~~~~v~~~~l~aL~~l~~~~~~~~~~~~~~~ll~~L~~~l~~~-~~~vr~~al 789 (1304)
18442 T 5IFE_C 718 PYGIESF-DSVLKPLWKGIRQ------HRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP-DEEMKKIVL 789 (1304)
18443 T ss_pred HHHHHHH-HHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHhcCHHHhhhHHHHHHHHHHHHhCCC-CHHHHHHHH
18444 Confidence 11 1111 2345666666654 2456677788888877653221111111124566666777655 677888888
18445
18446
18447 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
18448 Q Consensus 706 ~aLsnL~~~~ 715 (747)
18449 .+|..++...
18450 T Consensus 790 ~~L~~l~~~~ 799 (1304)
18451 T 5IFE_C 790 KVVKQCCGTD 799 (1304)
18452 T ss_pred HHHHHHHhcc
18453 Confidence 8888877543
18454
18455
18456 No 477
18457 >6AHD_1 Pre-mRNA-processing-splicing factor 8, Thioredoxin-like protein; Spliceosome, SPLICING; HET: IHP, GTP; 3.8A {Homo sapiens}
18458 Probab=70.42 E-value=0.38 Score=55.84 Aligned_cols=154 Identities=9% Similarity=0.047 Sum_probs=91.7 Template_Neff=9.800
18459
18460 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
18461 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
18462 +++.|...+.+..++.++..++.+|..++..... .... .-..+++.|...+.+.+..++..++.+|..++...
18463 T Consensus 644 ll~~L~~~l~s~~~~~~r~~al~~L~~l~~~~~~-----~~~~-~l~~ll~~L~~~L~d~~~~VR~~a~~~L~~l~~~~~ 717 (1304)
18464 T 6AHD_1 644 LLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGC-----AILP-HLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAAT 717 (1304)
18465 T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhh-----hchh-hHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCC
18466 Confidence 4455555555222367788888888888753221 0111 11345666777777777889999999999988652
18467
18468
18469 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
18470 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
18471 .. ...+ ..+++.|+..+.+ ....++..++.+|..++..............++..|...+.+. +..++..++
18472 T Consensus 718 ~~~~~~~-~~ll~~Ll~~l~~------~~~~v~~~~l~aL~~l~~~~~~~~~~~~~~~ll~~L~~~l~~~-~~~vr~~al 789 (1304)
18473 T 6AHD_1 718 PYGIESF-DSVLKPLWKGIRQ------HRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP-DEEMKKIVL 789 (1304)
18474 T ss_pred HHHHHHH-HHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHhcCHHHhhhHHHHHHHHHHHHhCCC-CHHHHHHHH
18475 Confidence 11 1111 2345666666654 2456677788888877653221111111124566666777655 677888888
18476
18477
18478 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
18479 Q Consensus 706 ~aLsnL~~~~ 715 (747)
18480 .+|..++...
18481 T Consensus 790 ~~L~~l~~~~ 799 (1304)
18482 T 6AHD_1 790 KVVKQCCGTD 799 (1304)
18483 T ss_pred HHHHHHHhcc
18484 Confidence 8888877543
18485
18486
18487 No 478
18488 >2QK2_A LP04448p; Mini spindles, Msps, XMAP215, Dis1; 2.1A {Drosophila melanogaster}
18489 Probab=70.35 E-value=0.34 Score=41.59 Aligned_cols=113 Identities=7% Similarity=-0.008 Sum_probs=66.2 Template_Neff=12.700
18490
18491 Q NP_000290.2 243 SGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLL-RSPNQNVQQAAAGALRNLVFRSTTN 321 (747)
18492 Q Consensus 243 ~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL-~s~d~eVr~~AL~aLs~La~~~~~~ 321 (747)
18493 ...+++.+...+.+.++.++..++..+..+....+....... ..+++.+...+ .+.++.++..++.++..+.......
18494 T Consensus 13 ~~~l~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~~ 91 (242)
18495 T 2QK2_A 13 LSKMPKDFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGEY-GALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKR 91 (242)
18496 T ss_dssp GGGSCTTHHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCCC-HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGG
18497 T ss_pred hhhCCHHHHHHHhccchHHHHHHHHHHHHHHhhCcccccchH-HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHhhHh
18498 Confidence 344555666667777788888999988888764332111111 23566666667 6667788888888888877543322
18499
18500
18501 Q NP_000290.2 322 KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
18502 Q Consensus 322 ~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
18503 .... ...+++.+...+. +.+..++..+..++..+.
18504 T Consensus 92 ~~~~-~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~ 126 (242)
18505 T 2QK2_A 92 FSNY-ASACVPSLLEKFK-EKKPNVVTALREAIDAIY 126 (242)
18506 T ss_dssp GHHH-HHHHHHHHHHGGG-CCCHHHHHHHHHHHHHHH
18507 T ss_pred HHHH-HHhHHHHHHHHHh-cCCHHHHHHHHHHHHHHH
18508 Confidence 1111 1234555555554 334455555555555544
18509
18510
18511 No 479
18512 >6MZG_E Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: GTP, GDP; 3.208A {Sus scrofa}
18513 Probab=70.02 E-value=0.35 Score=47.53 Aligned_cols=71 Identities=15% Similarity=0.238 Sum_probs=44.3 Template_Neff=12.700
18514
18515 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQ---LIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
18516 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~---~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
18517 ++.++..+. +.++.++..++.+|..++..... . .. .. ....+++.+..++.+.++.++..++.+|..+...
18518 T Consensus 138 ~~~l~~~l~-~~~~~vr~~~~~~l~~l~~~~~~---~-~~~~~~~-~~~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 211 (554)
18519 T 6MZG_E 138 VNLMLPSLS-NKLPRLVSSCVKCLATIIEEFGF---I-NVSDINI-LLSEILEPLPKLSSHADRNVRSETMNLILQIYKW 211 (554)
18520 T ss_dssp HHHHSGGGG-CSCHHHHHHHHHHHHHHHHHTCS---C-SCSCHHH-HHHHHHSSHHHHTTCSSHHHHHHHHHHHHHHHHH
18521 T ss_pred HHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhCC---C-ccccccc-cHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
18522 Confidence 444555555 35667777888888877653221 0 00 00 1235667777777777788888888888877654
18523
18524
18525 No 480
18526 >6QH7_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: SEP; 3.4A {Rattus norvegicus}
18527 Probab=69.91 E-value=0.36 Score=48.86 Aligned_cols=100 Identities=18% Similarity=0.054 Sum_probs=56.7 Template_Neff=12.200
18528
18529 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
18530 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
18531 ++.+...+.+.++.++..++.++..+........ ..++..+...+.+.++.++..++.++..+.... .
18532 T Consensus 76 ~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~-----~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~-------~ 143 (621)
18533 T 6QH7_A 76 HMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELI-----RLINNAIKNDLASRNPTFMGLALHCIANVGSRE-------M 143 (621)
18534 T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHSCCCCHHHH-----HHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCHH-------H
18535 T ss_pred HHHHHHHHcCCCccHHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCHH-------H
18536 Confidence 3344455555666677777777776654322111 123444555555666777777777777665321 0
18537
18538
18539 Q NP_000290.2 327 RQNGIREAVSLL--RRTGNAEIQKQLTGLLWNLSS 359 (747)
18540 Q Consensus 327 ~~~IL~~Ll~lL--~ss~d~eVr~~AL~aLsnLas 359 (747)
18541 ...++..+...+ . +.++.++..++.++..+..
18542 T Consensus 144 ~~~l~~~l~~~l~~~-~~~~~vr~~a~~~L~~~~~ 177 (621)
18543 T 6QH7_A 144 AEAFAGEIPKILVAG-DTMDSVKQSAALCLLRLYR 177 (621)
18544 T ss_dssp HHHHTTHHHHHHTTS-CCCHHHHHHHHHHHHHHHH
18545 T ss_pred HHHHHhhHHHHHHcC-CCCHHHHHHHHHHHHHHHH
18546 Confidence 113444455555 4 4566777788888777765
18547
18548
18549 No 481
18550 >1UKL_A Importin beta-1 subunit/Sterol regulatory element; Transcription factor, Nuclear transport factor; HET: MSE; 3.0A {Mus musculus} SCOP: a.118.1.1
18551 Probab=69.90 E-value=0.35 Score=50.26 Aligned_cols=154 Identities=11% Similarity=0.064 Sum_probs=87.3 Template_Neff=13.100
18552
18553 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
18554 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
18555 .++.+...+. +.+ +.++..++.+|..+...... . .... ....+++.+...+.+.+ +.++..++.++..+.
18556 T Consensus 129 l~~~l~~~l~-~~~~~~~~~~~al~~l~~l~~~~~~---~-~~~~-~~~~l~~~l~~~l~~~~~~~~vr~~a~~~l~~~~ 202 (876)
18557 T 1UKL_A 129 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (876)
18558 T ss_dssp SHHHHHHHHH-STTCCHHHHHHHHHHHHHHHHHSCS---T-TTSS-SCHHHHHHHHHTTSTTCSCHHHHHHHHHHHHHHG
18559 T ss_pred HHHHHHHHhh-CCCCCHHHHHHHHHHHHHHhccCCH---H-HHHH-HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
18560 Confidence 3455555565 233 56777788888777653221 0 0001 12346666777776655 778888888888876
18561
18562
18563 Q NP_000290.2 624 RH-PLL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
18564 Q Consensus 624 ~~-~e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
18565 .. ... . ......++..+..++.+ .++.++..++.+|..+....+..........+++.+...+.+. ++.+
18566 T Consensus 203 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~l~~~l~~~l~~~-~~~v 275 (876)
18567 T 1UKL_A 203 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 275 (876)
18568 T ss_dssp GGCHHHHHSHHHHHHHHHHHHHHTTS------SCHHHHHHHHHHHHHHHTTCGGGGHHHCCCCCHHHHHHHHHCS-CHHH
18569 T ss_pred HHhHHhcCCHHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHHHHHHHHHhHHhchHHHHHHHHHHhhCC-CHHH
18570 Confidence 54 111 0 01112233334444443 3577888899999888765333222122223456666666655 6778
18571
18572
18573 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
18574 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
18575 +..++.++..+...
18576 T Consensus 276 ~~~a~~~l~~l~~~ 289 (876)
18577 T 1UKL_A 276 ALQGIEFWSNVCDE 289 (876)
18578 T ss_dssp HHHHHHHHHHHHHH
18579 T ss_pred HHHHHHHHHHHHHH
18580 Confidence 88888888777653
18581
18582
18583 No 482
18584 >6EMK_C Serine/threonine-protein kinase TOR2 (E.C.2.7.1.67,2.7.11.1), Target; target of rapamycin, torc2, FRB; 8.0A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
18585 Probab=69.88 E-value=0.38 Score=58.82 Aligned_cols=136 Identities=10% Similarity=0.088 Sum_probs=72.9 Template_Neff=11.300
18586
18587 Q NP_000290.2 562 DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEV 640 (747)
18588 Q Consensus 562 ~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~L 640 (747)
18589 +.++..++.+|..++..... . .... -..+++.|...+.+....++..+..++..+...... ...+ ..+++.+
18590 T Consensus 1016 ~~vr~~a~~~l~~l~~~~~~---~-~~~~--~~~ll~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~l-~~i~~~l 1088 (2474)
18591 T 6EMK_C 1016 IKLQITIISVIESISKALEG---E-FKRF--VPETLTFFLDILENDQSNKRIVPIRILKSLVTFGPNLEDYS-HLIMPIV 1088 (2474)
18592 T ss_dssp CCCCCCCSSCCCCCCSSCSC---C-SCCC--CCCCCTTHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC-CCCTTHH
18593 T ss_pred hHHHHHHHHHHHHHHHHhhH---h-HHHH--HHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHhhhhHHHHH-HHHHHHH
18594 Confidence 34555666666666543221 0 0111 134556666666655445555555565555533111 1111 2244555
18595
18596
18597 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
18598 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
18599 +..+.. .++.++..++.+|..++..... .. ....++..+...+.+. ++.++..++.+|..++..
18600 T Consensus 1089 ~~~l~~------~~~~vr~~a~~~l~~l~~~~~~--~~-~~~~i~~~l~~~l~~~-~~~vr~~a~~~l~~l~~~ 1152 (2474)
18601 T 6EMK_C 1089 VRMTEY------SAGSLKKISIITLGRLAKNINL--SE-MSSRIVQALVRILNNG-DRELTKATMNTLSLLLLQ 1152 (2474)
18602 T ss_dssp HHCCCC------CCCCCTTTTTCCCCCCCCCCCC--CC-CCCCCCCCCCSCCCCC-CCCSSHHHHTTTCCGGGC
18603 T ss_pred HHHhcC------CCccHHHHHHHHHHHHHHhCCh--HH-HHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHH
18604 Confidence 555554 2567888888888888754221 11 1123566666666654 667788888888777653
18605
18606
18607 No 483
18608 >4XL5_C Green fluorescent protein, bGFP-A; AlphaRep Scaffold, Complex, EGFP, PROTEIN; HET: CRO; 2.0A {Aequorea victoria}
18609 Probab=69.87 E-value=0.36 Score=42.43 Aligned_cols=49 Identities=10% Similarity=0.082 Sum_probs=29.3 Template_Neff=12.400
18610
18611 Q NP_000290.2 654 SEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
18612 Q Consensus 654 d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
18613 ++.++..++.++..+.. ...++.+..++.+. ++.++..++.++..+...
18614 T Consensus 120 ~~~~~~~a~~~l~~~~~-----------~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~ 168 (263)
18615 T 4XL5_C 120 DPWVRLTAARALGEIGD-----------ERAVEPLIKALKDE-DPWVRLTAARALGQIGDE 168 (263)
18616 T ss_dssp SHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCS-SHHHHHHHHHHHHHHCCG
18617 T ss_pred CHHHHHHHHHHHHHHCC-----------hhhHHHHHHHhhCC-CHHHHHHHHHHHHhhCCH
18618 Confidence 34455555555554432 12345555666655 678888888888877653
18619
18620
18621 No 484
18622 >4D4Z_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE, EIF-5A, HYPUSINE; HET: B3P, GOL; 1.7A {HOMO SAPIENS}
18623 Probab=69.81 E-value=0.36 Score=42.88 Aligned_cols=127 Identities=10% Similarity=0.093 Sum_probs=78.7 Template_Neff=12.700
18624
18625 Q NP_000290.2 547 DAIRTYLNLMGKSKKDA--TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
18626 Q Consensus 547 G~I~~LL~LL~ss~d~e--Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
18627 ..++.|...+. +.+.. ++..++.+|..+.. ...++.+...+.+.++.++..++.+|..+..
18628 T Consensus 161 ~~~~~l~~~l~-~~~~~~~~r~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~ 223 (294)
18629 T 4D4Z_A 161 RDVGRLREALL-DESRPLFERYRAMFALRNAGG----------------EEAALALAEGLHCGSALFRHEVGYVLGQLQH 223 (294)
18630 T ss_dssp CCHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCH----------------HHHHHHHHHGGGSSCHHHHHHHHHHHHHHCC
18631 T ss_pred HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHcCC----------------HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC
18632 Confidence 34566667776 34433 66677777665532 1234455666667777888888888877653
18633
18634
18635 Q NP_000290.2 625 HPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
18636 Q Consensus 625 ~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
18637 . ..++.+...+.+. ..++.++..++.+|+.+... ..++.|..++.+. ++.++..+
18638 T Consensus 224 ~---------~~~~~l~~~l~~~----~~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a 278 (294)
18639 T 4D4Z_A 224 E---------AAVPQLAAALARC----TENPMVRHECAEALGAIARP-----------ACLAALQAHADDP-ERVVRESC 278 (294)
18640 T ss_dssp G---------GGHHHHHHHHHCT----TSCHHHHHHHHHHHHHHCCH-----------HHHHHHHHHTTCS-SHHHHHHH
18641 T ss_pred h---------hHHHHHHHHHHhC----CCCHHHHHHHHHHHHHhccH-----------HHHHHHHHHhcCC-ChHHHHHH
18642 Confidence 2 2344455555520 02567888888888876531 2455666667655 67788888
18643
18644
18645 Q NP_000290.2 705 RLLLSDMWSSK 715 (747)
18646 Q Consensus 705 L~aLsnL~~~~ 715 (747)
18647 +.+|..+....
18648 T Consensus 279 ~~~l~~~~~~~ 289 (294)
18649 T 4D4Z_A 279 EVALDMYEHET 289 (294)
18650 T ss_dssp HHHHHHHHHC-
18651 T ss_pred HHHHHHHHhhc
18652 Confidence 88888776443
18653
18654
18655 No 485
18656 >4D50_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE; HET: GAI; 1.7A {HOMO SAPIENS}
18657 Probab=69.81 E-value=0.36 Score=42.88 Aligned_cols=127 Identities=10% Similarity=0.093 Sum_probs=79.0 Template_Neff=12.700
18658
18659 Q NP_000290.2 547 DAIRTYLNLMGKSKKDA--TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
18660 Q Consensus 547 G~I~~LL~LL~ss~d~e--Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
18661 ..++.|...+. +.+.. ++..++.+|..+.. ...++.+...+.+.++.++..++.+|..+..
18662 T Consensus 161 ~~~~~l~~~l~-~~~~~~~~r~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~ 223 (294)
18663 T 4D50_A 161 RDVGRLREALL-DESRPLFERYRAMFALRNAGG----------------EEAALALAEGLHCGSALFRHEVGYVLGQLQH 223 (294)
18664 T ss_dssp CCHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCS----------------HHHHHHHHHGGGSSCHHHHHHHHHHHHHHCC
18665 T ss_pred HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHcCC----------------HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC
18666 Confidence 34566667776 34433 66677777665532 1234455666667777888888888877653
18667
18668
18669 Q NP_000290.2 625 HPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
18670 Q Consensus 625 ~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
18671 . ..++.+...+.+. ..++.++..++.+|+.+... ..++.|..++.+. ++.++..+
18672 T Consensus 224 ~---------~~~~~l~~~l~~~----~~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a 278 (294)
18673 T 4D50_A 224 E---------AAVPQLAAALARC----TENPMVRHECAEALGAIARP-----------ACLAALQAHADDP-ERVVRESC 278 (294)
18674 T ss_dssp G---------GGHHHHHHHHHCT----TSCHHHHHHHHHHHHHHCCH-----------HHHHHHHHTTTCS-CHHHHHHH
18675 T ss_pred h---------hHHHHHHHHHHhC----CCCHHHHHHHHHHHHHhccH-----------HHHHHHHHHhcCC-ChHHHHHH
18676 Confidence 2 2344455555520 02567888888888876531 2455666667655 67788888
18677
18678
18679 Q NP_000290.2 705 RLLLSDMWSSK 715 (747)
18680 Q Consensus 705 L~aLsnL~~~~ 715 (747)
18681 +.+|..+....
18682 T Consensus 279 ~~~l~~~~~~~ 289 (294)
18683 T 4D50_A 279 EVALDMYEHET 289 (294)
18684 T ss_dssp HHHHHHHHHHH
18685 T ss_pred HHHHHHHHhhc
18686 Confidence 88888776443
18687
18688
18689 No 486
18690 >6QH5_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
18691 Probab=69.69 E-value=0.37 Score=48.79 Aligned_cols=67 Identities=12% Similarity=0.101 Sum_probs=37.3 Template_Neff=12.200
18692
18693 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNMS 623 (747)
18694 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsnLa 623 (747)
18695 .++.+..++. +.++.++..++.+|..+...... ... -...++.+...+. +.++.++..++.+|..+.
18696 T Consensus 330 ~~~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~------~~~--~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~ 397 (621)
18697 T 6QH5_A 330 ACNQLGQFLQ-HRETNLRYLALESMCTLASSEFS------HEA--VKTHIETVINALKTERDVSVRQRAVDLLYAMC 397 (621)
18698 T ss_pred HHHHHHHHHh-CCCHHHHHHHHHHHHHHHhcCCC------hhH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc
18699 Confidence 4555666665 35666777777777777653110 111 1224445555555 555666666666666653
18700
18701
18702 No 487
18703 >4XL5_C Green fluorescent protein, bGFP-A; AlphaRep Scaffold, Complex, EGFP, PROTEIN; HET: CRO; 2.0A {Aequorea victoria}
18704 Probab=69.51 E-value=0.37 Score=42.33 Aligned_cols=88 Identities=10% Similarity=0.162 Sum_probs=47.9 Template_Neff=12.400
18705
18706 Q NP_000290.2 600 IARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQY 679 (747)
18707 Q Consensus 600 Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~L 679 (747)
18708 +..++.+.++.++..++.++..+.. ...++.+...+.+ .++.++..++.+|..+..
18709 T Consensus 143 l~~~l~~~~~~vr~~a~~~l~~~~~---------~~~~~~l~~~l~~------~~~~~r~~a~~~l~~~~~--------- 198 (263)
18710 T 4XL5_C 143 LIKALKDEDPWVRLTAARALGQIGD---------ERAVEPLIKALKD------EDASVRKAAAVALGQIGD--------- 198 (263)
18711 T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHCC---------GGGHHHHHHHTTC------SSHHHHHHHHHHHHHHCC---------
18712 T ss_pred HHHHhhCCCHHHHHHHHHHHHhhCC---------HHHHHHHHHHhcC------CCHHHHHHHHHHHHHhCC---------
18713 Confidence 3344444444555555555444432 1223344444444 245566667666666542
18714
18715
18716 Q NP_000290.2 680 FSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
18717 Q Consensus 680 ve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
18718 ...++.+..++.+. +..++..++.++..+...
18719 T Consensus 199 --~~~~~~l~~~l~~~-~~~~~~~a~~~l~~~~~~ 230 (263)
18720 T 4XL5_C 199 --ERAVEPLIKALKDE-DEYVRQRAASALGKIGGE 230 (263)
18721 T ss_dssp --GGGHHHHHHHTTCS-SHHHHHHHHHHHHHHCHH
18722 T ss_pred --hhhHHHHHHHhcCC-CHHHHHHHHHHHHhhCcH
18723 Confidence 12345566666655 677888888888887753
18724
18725
18726 No 488
18727 >6LTJ_L Histone H3.2, Histone H4, Histone; Chromatin remodeler, Complex, GENE REGULATION; 3.7A {Xenopus laevis}
18728 Probab=69.20 E-value=0.52 Score=55.12 Aligned_cols=106 Identities=11% Similarity=0.124 Sum_probs=60.8 Template_Neff=5.100
18729
18730 Q NP_000290.2 609 SDVVRSGASLLSNMSRHPLL---HRVMGNQVFPEVTRLLTSHTGNTSNSE----------DILSSACYTVRNLMASQPQL 675 (747)
18731 Q Consensus 609 ~eVr~~AL~aLsnLa~~~e~---~~ll~~giI~~Ll~LL~s~s~~~~~d~----------eVr~~Al~aLsnLa~~s~e~ 675 (747)
18732 ..+++.++.+|.||+...+. ...+...++..|+.++...... ..++ ..+..|+.+|+.|+.. +.+
18733 T Consensus 1064 ~~LRenaLviLaNIAg~LdLs~~~e~I~~~ild~LLhwlv~~sa~-a~Dp~~~~~~~~~lSp~~lALEaLsKLsv~-d~N 1141 (1295)
18734 T 6LTJ_L 1064 EMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAE-AQDPFSTLGPNAVLSPQRLVLETLSKLSIQ-DNN 1141 (1295)
18735 T ss_dssp HHHHHHHHHHHHHHGGGCCCSSSCHHHHHHHHHHHHHHHHCCSSS-SSSCCTTSCTTCCCCHHHHHHHHHHHHHTS-HHH
18736 T ss_pred HHHHHHHHHHHHHHHcccCCCCCChHhHHHHHHHHHHHHcCcChh-cCChhhccCCCCCCCHHHHHHHHHHHHhCC-Cch
18737 Confidence 35667788889998876221 1111112455555544321000 0011 1234589999999874 555
18738
18739
18740 Q NP_000290.2 676 AKQYFSSS-------MLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
18741 Q Consensus 676 ~~~Lve~g-------iL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
18742 ...++... ++..|+.+|....+..+++.++.+|.+|+...+
18743 T Consensus 1142 ~dlLlat~p~srle~Ll~~LV~lL~~~ed~~lrE~AL~lL~~Ls~~~~ 1189 (1295)
18744 T 6LTJ_L 1142 VDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDS 1189 (1295)
18745 T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHCH
18746 T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCH
18747 Confidence 55555433 566667777644245678899999999987543
18748
18749
18750 No 489
18751 >5WLC_LM rpS18_uS13, rpS4_eS4, rpS5_uS7, rpS6_eS6, rpS7_eS7; Ribosome assembly, RIBOSOME; 3.8A {Saccharomyces cerevisiae BY4741}
18752 Probab=69.09 E-value=0.44 Score=57.42 Aligned_cols=153 Identities=6% Similarity=-0.058 Sum_probs=85.4 Template_Neff=9.300
18753
18754 Q NP_000290.2 548 AIRTYLNLMGKS-----KKDATLEACAGALQNLTASKGLMSSGMSQL-IGLKEKGLPQIARLLQSGNSDVVRSGASLLSN 621 (747)
18755 Q Consensus 548 ~I~~LL~LL~ss-----~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~-llie~giI~~Ll~LL~s~d~eVr~~AL~aLsn 621 (747)
18756 +++.++..+... .+..++..++.+|..++..... ..... .. -..+++.|...+......++..++.++..
18757 T Consensus 1597 ll~~l~~~L~~~~~~~~~~~~v~~~al~~L~~l~~~~~~---~~~~~~~~-~~~il~~L~~~L~~~~~~v~~~al~~L~~ 1672 (1769)
18758 T 5WLC_LM 1597 LLEPVDMLLKRFISKDMENVNLRRLVINSLTSSLKFDRD---EYWKSTSR-FELISVSLVNQLSNIENSIGKYLVKAIGA 1672 (1769)
18759 T ss_pred HHHHHHHHHHHhcCCchhcHHHHHHHHHHHHHHHhhCCc---ccccCHhH-HHHHHHHHHHHHHccchHHHHHHHHHHHH
18760 Confidence 455555555421 1356677888888887764221 00000 11 13456666666666556677778888888
18761
18762
18763 Q NP_000290.2 622 MSRH-PLLHRVMGNQVFPEVTRLLTSHTGNTSN-SEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPK 699 (747)
18764 Q Consensus 622 La~~-~e~~~ll~~giI~~Ll~LL~s~s~~~~~-d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~e 699 (747)
18765 ++.. ....... ..+.+.++..+.+ . +..++..++.++..+..........+. ..+++.+.+.+.+. ++.
18766 T Consensus 1673 L~~~~~~~~~~~-~~l~~~ll~~l~~------~~~~~vR~~al~~L~~l~~~~g~~~~~~l-~~il~~L~e~Led~-~~~ 1743 (1769)
18767 T 5WLC_LM 1673 LASNNSGVDEHN-QILNKLIVEHMKA------SCSSNEKLWAIRAMKLIYSKIGESWLVLL-PQLVPVIAELLEDD-DEE 1743 (1769)
18768 T ss_pred HHHhccCChHHH-HHHHHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHChhHHHhH-hHHHHHHHHHccCC-CHH
18769 Confidence 7653 1111111 1133344444433 2 567788888898888765332211111 24567777777765 677
18770
18771
18772 Q NP_000290.2 700 AAEAA-RLLLSDMWS 713 (747)
18773 Q Consensus 700 Vr~aA-L~aLsnL~~ 713 (747)
18774 ++..+ ..++..+..
18775 T Consensus 1744 Vr~~a~~~~l~~L~~ 1758 (1769)
18776 T 5WLC_LM 1744 IEREVRTGLVKVVEN 1758 (1769)
18777 T ss_pred HHHHHHHHHHHHHHH
18778 Confidence 88888 777776654
18779
18780
18781 No 490
18782 >5YVI_A Transportin-1, RNA-binding protein FUS; Importin family, PROTEIN TRANSPORT, PROTEIN; 2.9A {Homo sapiens}
18783 Probab=69.07 E-value=0.37 Score=49.71 Aligned_cols=155 Identities=9% Similarity=0.106 Sum_probs=91.1 Template_Neff=13.300
18784
18785 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIG--LKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
18786 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~ll--ie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
18787 .++.+...+. +.++.++..++.+|..++..... ......+ .-..+++.+...+.+.++.++..++.+|..++..
18788 T Consensus 131 ~~~~l~~~l~-~~~~~~~~~~l~~l~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 206 (868)
18789 T 5YVI_A 131 LLPKLCSLLD-SEDYNTCEGAFGALQKICEDSAE---ILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIIS 206 (868)
18790 T ss_dssp HHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHHTT---CSCC--CCSTHHHHHHHHGGGGGCSSHHHHHHHHHHHHTTTTT
18791 T ss_pred HHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHhh---hcchhhccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
18792 Confidence 4555666665 35667777888888887754211 0000000 0134566677777777788888999999888765
18793
18794
18795 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
18796 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
18797 ... .......+++.+...+.+ .+..++..++.+|..++........... ..+++.+...+.+. ++.++..+
18798 T Consensus 207 ~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~v~~~~ 278 (868)
18799 T 5YVI_A 207 RTQALMLHIDSFIENLFALAGD------EEPEVRKNVCRALVMLLEVRMDRLLPHM-HNIVEYMLQRTQDQ-DENVALEA 278 (868)
18800 T ss_dssp TCHHHHTTHHHHHHHHHHTTTC------SSHHHHHHHHHHHHHHHHHCHHHHGGGH-HHHHHHHHHHHTCS-SHHHHHHH
18801 T ss_pred chHHHHHhHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHcHHHHHHhH-HHHHHHHHHHccCC-CHHHHHHH
18802 Confidence 211 111112345555555544 2567788888888888764322111111 23456666666655 67788888
18803
18804
18805 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
18806 Q Consensus 705 L~aLsnL~~~ 714 (747)
18807 +.++..++..
18808 T Consensus 279 ~~~l~~l~~~ 288 (868)
18809 T 5YVI_A 279 CEFWLTLAEQ 288 (868)
18810 T ss_dssp HHHHHHHHHS
18811 T ss_pred HHHHHHHhcC
18812 Confidence 8888887764
18813
18814
18815 No 491
18816 >3VWA_A Cytoplasmic export protein 1; tRNA, nuclear export, HEAT repeat; 2.2A {Saccharomyces cerevisiae}
18817 Probab=68.93 E-value=0.42 Score=49.31 Aligned_cols=111 Identities=9% Similarity=0.051 Sum_probs=80.6 Template_Neff=10.600
18818
18819 Q NP_000290.2 594 EKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP 673 (747)
18820 Q Consensus 594 ~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~ 673 (747)
18821 ..+++.+..++.+.++.++..++..|..++.... .......+++.+...+.+ .+..++..++.+|..++...+
18822 T Consensus 340 ~~~~~~l~~ll~~~~~~vR~~~~~~l~~~~~~~~-~~~~~~~~~~~l~~~l~d------~~~~vr~~a~~~l~~l~~~~~ 412 (560)
18823 T 3VWA_A 340 VGFNDLITQSFKLPDRQVRFLLLIYLPKLIGPLS-KSEISSRIYPHFIQGLTD------SDATLRLQTLKTIPCIVSCLT 412 (560)
18824 T ss_dssp TTHHHHHHHHHHCCCHHHHHHHHHHHHHHBTTBC-HHHCCCCCHHHHHHGGGC------SSHHHHHHHHHHHHHHGGGCC
18825 T ss_pred cchHHHHHHHcCCCCHHHHHHHHHhHHHHhccCC-HHHHHhchHHHHHHHhcC------CCHHHHHHHHHHHHHHHhhCC
18826 Confidence 4577888888888888999999999888876411 112234567777777766 367889999999999886432
18827
18828
18829 Q NP_000290.2 674 QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
18830 Q Consensus 674 e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
18831 .. .....+++.+..++.+. ++.++..++.+|..++...
18832 T Consensus 413 ~~---~~~~~ll~~l~~~l~d~-~~~vR~~a~~~l~~i~~~~ 450 (560)
18833 T 3VWA_A 413 ER---QLNNELLRFLAKTQVDS-DVEIRTWTVIIISKISTIL 450 (560)
18834 T ss_dssp HH---CCCCCCHHHHHHHTTCS-SHHHHHHHHHHHHHHGGGS
18835 T ss_pred HH---HHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHh
18836 Confidence 11 22345677888888766 7899999999999887544
18837
18838
18839 No 492
18840 >3VWA_B Cytoplasmic export protein 1; tRNA, nuclear export, HEAT repeat; HET: MSE; 2.2A {Saccharomyces cerevisiae}
18841 Probab=68.86 E-value=0.42 Score=49.21 Aligned_cols=111 Identities=9% Similarity=0.062 Sum_probs=80.6 Template_Neff=10.700
18842
18843 Q NP_000290.2 594 EKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP 673 (747)
18844 Q Consensus 594 ~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~ 673 (747)
18845 ..+++.+..++.+.++.++..++..|..++.... .......+++.++..+.+ .++.++..++.+|..++...+
18846 T Consensus 340 ~~~~~~l~~l~~~~~~~vr~~~~~~l~~~~~~~~-~~~~~~~~l~~l~~~l~d------~~~~vr~~a~~~l~~l~~~~~ 412 (560)
18847 T 3VWA_B 340 VGFNDLITQSFKLPDRQVRFLLLIYLPKLIGPLS-KSEISSRIYPHFIQGLTD------SDATLRLQTLKTIPCIVSCLT 412 (560)
18848 T ss_dssp TTHHHHHHHHHHCCCHHHHHHHHHHHHHHBTTBC-HHHCCCCCHHHHHHGGGC------SCHHHHHHHHHHHHHHGGGSC
18849 T ss_pred cchHHHHHHHcCCCcHHHHHHHHHhHHHHhhhCC-HHHHhhchHHHHHHHhcC------CCHHHHHHHHHHHHHHHhhCC
18850 Confidence 4577888888888888899999998888876421 112234567777777776 368899999999999886422
18851
18852
18853 Q NP_000290.2 674 QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
18854 Q Consensus 674 e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
18855 . ......+++.|..++.+. ++.++..++.+|..++...
18856 T Consensus 413 ~---~~~~~~ll~~l~~~l~d~-~~~vR~~a~~~l~~i~~~~ 450 (560)
18857 T 3VWA_B 413 E---RQLNNELLRFLAKTQVDS-DVEIRTWTVIIISKISTIL 450 (560)
18858 T ss_dssp H---HCCCCCHHHHHHHHTTCS-SHHHHHHHHHHHHHHHTTS
18859 T ss_pred H---HHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHh
18860 Confidence 1 122335678888888776 7899999999999887643
18861
18862
18863 No 493
18864 >3C5W_A PP2A A subunit, PP2A C; methylesterase, phosphatase, PP2A, HYDROLASE; 2.8A {Homo sapiens}
18865 Probab=68.82 E-value=0.38 Score=40.27 Aligned_cols=109 Identities=12% Similarity=0.007 Sum_probs=69.9 Template_Neff=13.200
18866
18867 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
18868 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
18869 ..++.+...+.+.++.++..++..+..+....... .....+++.+...+.+.++.++..++.++..+.......
18870 T Consensus 7 ~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~vr~~~~~~l~~l~~~~~~~--- 80 (232)
18871 T 3C5W_A 7 YPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVE---RLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVE--- 80 (232)
18872 T ss_dssp SHHHHHHHHHTCSSHHHHHHHHTTHHHHHHHHCSS---HCCCCCHHHHHHHTTCSSHHHHHHHHTTHHHHHHHHCGG---
18873 T ss_pred cHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhChH---HHHHhHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhCHH---
18874 Confidence 44556666777777888888888888876543211 112345666666677777788888888888776543211
18875
18876
18877 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
18878 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
18879 .....+++.+...+. +.++.++..++.++..+...
18880 T Consensus 81 ~~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 115 (232)
18881 T 3C5W_A 81 FFDEKLNSLCMAWLV-DHVYAIREAATSNLKKLVEK 115 (232)
18882 T ss_dssp GTTTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHH
18883 T ss_pred HHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHH
18884 Confidence 112235555666665 45677888888888877754
18885
18886
18887 No 494
18888 >4K92_B CLIP-associating protein 1; HEAT-Repeat TOG domain, Regulator of; HET: MSE; 2.005A {Homo sapiens}
18889 Probab=68.63 E-value=0.41 Score=43.13 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=66.8 Template_Neff=11.700
18890
18891 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
18892 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
18893 ..+++.++..+.+.+..++..++.++..+..... ...+++.+...+.+.++.++..++.++..++........
18894 T Consensus 129 ~~~l~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~-------~~~~~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~~~~~~ 201 (273)
18895 T 4K92_B 129 EAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTH-------IPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 201 (273)
18896 T ss_dssp HHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHCC-------CTTHHHHHHGGGGCSCHHHHHHHHHHHHHHHHHSCHHHH
18897 T ss_pred HHHHHHHHHHCccccHHHHHHHHHHHHHHHHhCC-------CchHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhH
18898 Confidence 3445555555555566677777777777765321 123455555666666677888888888877754322100
18899
18900
18901 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
18902 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
18903 ......+++.+...+. +.+..++..++.++..+...
18904 T Consensus 202 ~~~~~~i~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~ 237 (273)
18905 T 4K92_B 202 ERHISVLAETIKKGIH-DADSEARIEARKCYWGFHSH 237 (273)
18906 T ss_dssp TTCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHH
18907 T ss_pred HHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHH
18908 Confidence 1112345566666665 55778888888888888764
18909
18910
18911 No 495
18912 >6MQ7_B CLIP-associating protein 1; microtubule binding protein, STRUCTURAL PROTEIN; 1.78A {Homo sapiens}
18913 Probab=68.63 E-value=0.41 Score=43.13 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=66.8 Template_Neff=11.700
18914
18915 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
18916 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
18917 ..+++.++..+.+.+..++..++.++..+..... ...+++.+...+.+.++.++..++.++..++........
18918 T Consensus 129 ~~~l~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~-------~~~~~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~~~~~~ 201 (273)
18919 T 6MQ7_B 129 EAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTH-------IPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 201 (273)
18920 T ss_dssp HHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHCC-------CGGGHHHHHHGGGCSCHHHHHHHHHHHHHHHHHSCGGGT
18921 T ss_pred HHHHHHHHHHCccccHHHHHHHHHHHHHHHHhCC-------CchHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhH
18922 Confidence 3445555555555566677777777777765321 123455555666666677888888888877754322100
18923
18924
18925 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
18926 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
18927 ......+++.+...+. +.+..++..++.++..+...
18928 T Consensus 202 ~~~~~~i~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~ 237 (273)
18929 T 6MQ7_B 202 ERHISVLAETIKKGIH-DADSEARIEARKCYWGFHSH 237 (273)
18930 T ss_dssp TTCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHH
18931 T ss_pred HHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHH
18932 Confidence 1112345566666665 55778888888888888764
18933
18934
18935 No 496
18936 >4LAC_A Serine/threonine-protein phosphatase 2A activator (E.C.5.2.1.8); PP2A, PTPA, protein phosphatase, signaling; HET: AGS, MES; 2.82A {Homo sapiens}
18937 Probab=68.25 E-value=0.41 Score=41.40 Aligned_cols=109 Identities=7% Similarity=-0.006 Sum_probs=68.9 Template_Neff=12.800
18938
18939 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
18940 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
18941 .+++.+...+.+.++.++..++.++..+...... ......+++.+...+.+.+..++..++.++..+.......
18942 T Consensus 111 ~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~--- 184 (258)
18943 T 4LAC_A 111 KLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGK---EWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQD--- 184 (258)
18944 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCh---hHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHHcCCCC---
18945 Confidence 3455556666666778888888888887654322 1112345566666666667778888888888776543221
18946
18947
18948 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
18949 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
18950 .....+++.+...+. +.++.++..++.++..+...
18951 T Consensus 185 ~~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 219 (258)
18952 T 4LAC_A 185 ITTKHMLPTVLRMAG-DPVANVRFNVAKSLQKIGPI 219 (258)
18953 T ss_pred ccHhhHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHH
18954 Confidence 112345566666665 55677888888888887653
18955
18956
18957 No 497
18958 >6MQ5_A CLIP-associating protein 1; Microtubule Plus End Binding, STRUCTURAL; HET: MSE; 2.146A {Homo sapiens}
18959 Probab=68.04 E-value=0.43 Score=42.33 Aligned_cols=108 Identities=10% Similarity=0.048 Sum_probs=65.9 Template_Neff=11.900
18960
18961 Q NP_000290.2 245 LTIPKAV-QYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
18962 Q Consensus 245 ~iL~~Ll-~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
18963 .++..+. .++.+.++.++..++.++..+........... ...+++.+...+.+.+..++..+..++..+......
18964 T Consensus 49 ~~~~~l~~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~--- 124 (257)
18965 T 6MQ5_A 49 KLVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQ-IGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQAAN--- 124 (257)
18966 T ss_dssp HHHHHCCCCCTTCSSHHHHHHHHHHHHHHHHHHGGGGHHH-HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHTSC---
18967 T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhHHHHHHH-HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHccC---
18968 Confidence 3444444 44556677788888888888876433221111 134566666666666677788888888777643211
18969
18970
18971 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
18972 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
18973 ...+++.+...+. ..++.++..++.++..+...
18974 T Consensus 125 ---~~~~~~~l~~~l~-~~~~~~r~~~l~~l~~l~~~ 157 (257)
18975 T 6MQ5_A 125 ---PQYVWDRMLGGFK-HKNFRTREGICLCLIATLNA 157 (257)
18976 T ss_dssp ---HHHHHHTTGGGGG-BSSHHHHHHHHHHHHHHHHH
18977 T ss_pred ---hHHHHHHHhhhcC-CCCHHHHHHHHHHHHHHHHH
18978 Confidence 1234555555564 45677888888888877653
18979
18980
18981 No 498
18982 >2QK1_A Protein STU2; stu2, Stu2p, XMAP215, Dis1, TOG; 1.7A {Saccharomyces cerevisiae}
18983 Probab=67.88 E-value=0.42 Score=40.93 Aligned_cols=116 Identities=3% Similarity=-0.016 Sum_probs=68.4 Template_Neff=12.900
18984
18985 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTN-- 321 (747)
18986 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~-- 321 (747)
18987 ..+++.+...+.+.+..++..++.++..+...............+++.+...+.+.++.++..++.++..++......
18988 T Consensus 103 ~~~~~~l~~~l~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~~~~~l~~~~~~~~~~~~ 182 (249)
18989 T 2QK1_A 103 SLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYS 182 (249)
18990 T ss_dssp HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSH
18991 T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhChhcccCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhccccch
18992 Confidence 345556666666666777888888888776543210000111245566666666667778888888888776543310
18993
18994
18995 Q NP_000290.2 322 -KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
18996 Q Consensus 322 -~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
18997 ........+++.+...+. +.++.++..++.++..+...
18998 T Consensus 183 ~~~~~~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 221 (249)
18999 T 2QK1_A 183 TLQRYLKDEVVPIVIQIVN-DTQPAIRTIGFESFAILIKI 221 (249)
19000 T ss_dssp HHHHHCCCCCHHHHHHHHT-CSSHHHHHHHHHHHHHHHHH
19001 T ss_pred hhhHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHH
19002 Confidence 000111235555666665 55677888888888877653
19003
19004
19005 No 499
19006 >4D4Z_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE, EIF-5A, HYPUSINE; HET: B3P, GOL; 1.7A {HOMO SAPIENS}
19007 Probab=67.63 E-value=0.43 Score=42.31 Aligned_cols=60 Identities=10% Similarity=0.123 Sum_probs=34.5 Template_Neff=12.700
19008
19009 Q NP_000290.2 547 DAIRTYLNLMGKSK--KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
19010 Q Consensus 547 G~I~~LL~LL~ss~--d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
19011 ..++.|...+. +. ++.++..++.+|..+... ..++.+...+.+.++.++..++.+|..+.
19012 T Consensus 74 ~~~~~l~~~l~-~~~~~~~vr~~a~~~l~~~~~~----------------~~~~~l~~~l~~~~~~v~~~a~~~l~~~~ 135 (294)
19013 T 4D4Z_A 74 RAIPMLVDVLQ-DTRQEPMVRHEAGEALGAIGDP----------------EVLEILKQYSSDPVIEVAETCQLAVRRLE 135 (294)
19014 T ss_dssp GGHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCCG----------------GGHHHHHHHTTCSSHHHHHHHHHHHHHHH
19015 T ss_pred chHHHHHHHhh-CCCCCHHHHHHHHHHHHHhCCH----------------HHHHHHHHHccCCCchHHHHHHHHHHHHH
19016 Confidence 34556666666 34 566777777776655421 12334455555556666666666666553
19017
19018
19019 No 500
19020 >4D50_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE; HET: GAI; 1.7A {HOMO SAPIENS}
19021 Probab=67.63 E-value=0.43 Score=42.31 Aligned_cols=60 Identities=10% Similarity=0.123 Sum_probs=34.5 Template_Neff=12.700
19022
19023 Q NP_000290.2 547 DAIRTYLNLMGKSK--KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
19024 Q Consensus 547 G~I~~LL~LL~ss~--d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
19025 ..++.|...+. +. ++.++..++.+|..+... ..++.+...+.+.++.++..++.+|..+.
19026 T Consensus 74 ~~~~~l~~~l~-~~~~~~~vr~~a~~~l~~~~~~----------------~~~~~l~~~l~~~~~~v~~~a~~~l~~~~ 135 (294)
19027 T 4D50_A 74 RAIPMLVDVLQ-DTRQEPMVRHEAGEALGAIGDP----------------EVLEILKQYSSDPVIEVAETCQLAVRRLE 135 (294)
19028 T ss_dssp GGHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCCG----------------GGHHHHHHHTTCSSHHHHHHHHHHHHHHH
19029 T ss_pred chHHHHHHHhh-CCCCCHHHHHHHHHHHHHhCCH----------------HHHHHHHHHccCCCchHHHHHHHHHHHHH
19030 Confidence 34556666666 34 566777777776655421 12334455555556666666666666553
19031
19032
19033 Query NP_000548.2
19034 Match_columns 501
19035 No_of_seqs 1691 out of 7065
19036 Neff 7.55495
19037 Searched_HMMs 400
19038 Date Sat Jul 25 00:10:29 2020
19039 Command /home/guerler/hh-suite/build/bin/hhblits -i /home/guerler/human/fasta/NP_00/NP_000548.2.fasta -d /home/guerler/pdb70/pdb70 -o /home/guerler/human/hhr/NP_00/NP_000548.2.hhr
19040
19041 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
19042 1 5FFO_H Integrin alpha-V, Integ 100.0 2.3E-42 2.1E-46 353.3 0.0 315 143-501 24-363 (363)
19043 2 3RJR_C Transforming growth fac 100.0 3.4E-42 3.1E-46 351.8 0.0 315 143-501 24-363 (363)
19044 3 5VQF_C Transforming growth fac 100.0 3.4E-42 3.2E-46 351.8 0.0 315 143-501 24-363 (363)
19045 4 5NTU_A Growth/differentiation 100.0 9.5E-42 8.8E-46 343.8 0.0 309 142-501 17-335 (335)
19046 5 5HLY_A Inhibin beta A chain; G 100.0 3E-39 2.7E-43 332.7 0.0 307 142-501 40-383 (383)
19047 6 6SF3_B Serine/threonine-protei 99.8 1.5E-26 1.3E-30 194.7 0.0 105 397-501 4-108 (108)
19048 7 4MPL_A Growth/differentiation 99.8 2.3E-26 2E-30 196.3 0.0 106 396-501 10-116 (116)
19049 8 6Z3J_B Growth/differentiation 99.8 2.6E-26 2.3E-30 196.2 0.0 107 395-501 11-117 (117)
19050 9 5I05_A Growth/differentiation 99.8 4E-26 3.5E-30 192.9 0.0 106 396-501 4-110 (110)
19051 10 4N1D_A Bone morphogenetic prot 99.8 4.5E-26 3.9E-30 194.5 0.0 106 396-501 11-116 (116)
19052 11 2QCQ_B Bone morphogenetic prot 99.8 5.7E-26 5E-30 191.9 0.0 105 397-501 5-110 (110)
19053 12 1LXI_A BONE MORPHOGENETIC PROT 99.8 9E-26 7.8E-30 198.7 0.0 111 391-501 29-139 (139)
19054 13 6OMN_G Bone morphogenetic prot 99.8 9.8E-26 8.7E-30 189.8 0.0 105 396-501 4-108 (108)
19055 14 2R53_A Bone morphogenetic prot 99.8 9.9E-26 8.7E-30 192.3 0.0 106 396-501 11-116 (116)
19056 15 2R53_B Bone morphogenetic prot 99.8 9.9E-26 8.7E-30 192.3 0.0 106 396-501 11-116 (116)
19057 16 1REU_A bone morphogenetic prot 99.8 1.1E-25 1E-29 187.7 0.0 102 399-501 2-103 (103)
19058 17 1M4U_L Bone Morphogenetic Prot 99.8 1.2E-25 1.1E-29 197.8 0.0 111 391-501 29-139 (139)
19059 18 2H62_B Bone morphogenetic prot 99.8 2.1E-25 1.9E-29 189.6 0.0 105 396-501 10-114 (114)
19060 19 6Q2J_B Growth/differentiation 99.8 3.8E-25 3.2E-29 193.7 0.0 102 396-501 34-135 (135)
19061 20 1KTZ_A TRANSFORMING GROWTH FAC 99.8 7.5E-25 6.6E-29 185.6 0.0 102 395-501 10-112 (112)
19062 21 5TY4_B TGF-beta receptor type- 99.8 9.9E-25 8.8E-29 179.9 0.0 96 400-500 1-97 (97)
19063 22 5VT2_B Growth/differentiation 99.8 1.1E-24 9.5E-29 184.6 0.0 102 396-501 11-112 (112)
19064 23 5VZ3_A Growth/differentiation 99.8 1.1E-24 9.5E-29 184.6 0.0 102 396-501 11-112 (112)
19065 24 2ARP_A Inhibin beta A chain, F 99.8 1.3E-24 1.2E-28 184.9 0.0 105 397-501 8-116 (116)
19066 25 2ARV_A Inhibin beta A chain; h 99.8 1.3E-24 1.2E-28 184.9 0.0 105 397-501 8-116 (116)
19067 26 2P6A_B Activin A, Follistatin 99.8 1.3E-24 1.2E-28 184.9 0.0 105 397-501 8-116 (116)
19068 27 2TGI_A TRANSFORMING GROWTH FAC 99.8 1.5E-24 1.3E-28 183.7 0.0 101 396-501 11-112 (112)
19069 28 3HH2_B Growth/differentiation 99.8 2.4E-24 2.1E-28 181.5 0.0 99 396-501 11-109 (109)
19070 29 5F3B_C RK35 Chimeric antibody 99.8 2.4E-24 2.1E-28 181.5 0.0 99 396-501 11-109 (109)
19071 30 3KFD_D Transforming growth fac 99.8 3.7E-24 3.2E-28 181.3 0.0 102 395-501 10-112 (112)
19072 31 5E4G_A Growth/differentiation 99.8 1.2E-23 1.1E-27 177.0 0.0 99 396-501 11-109 (109)
19073 32 5NMZ_B Neurturin; cystine knot 99.7 2.2E-22 1.9E-26 167.0 0.0 93 397-501 4-101 (101)
19074 33 5NMZ_C Neurturin; cystine knot 99.7 2.2E-22 1.9E-26 167.0 0.0 93 397-501 4-101 (101)
19075 34 2GH0_C artemin, GDNF family re 99.7 2.9E-22 2.6E-26 166.0 0.0 95 398-501 2-100 (101)
19076 35 5MR4_B Neurturin, GDNF family 99.7 4.4E-22 3.9E-26 165.4 0.0 94 396-501 4-102 (102)
19077 36 2V5E_B GDNF FAMILY RECEPTOR AL 99.7 7.4E-22 6.6E-26 163.6 0.0 93 397-501 5-101 (101)
19078 37 2ASK_B artemin; Glial cell der 99.7 9.1E-22 8E-26 166.6 0.0 94 396-501 12-112 (113)
19079 38 3FUB_D GDNF family receptor al 99.7 9.6E-22 8.1E-26 171.2 0.0 96 394-501 35-134 (134)
19080 39 1AGQ_C GLIAL CELL-DERIVED NEUR 99.7 2.2E-21 1.8E-25 169.0 0.0 95 395-501 37-135 (135)
19081 40 5TX2_A Transforming growth fac 99.7 2.9E-21 2.5E-25 157.7 0.0 81 396-501 12-93 (93)
19082 41 5TX4_B TGF-beta receptor type- 99.7 3E-21 2.6E-25 157.3 0.0 81 396-501 11-92 (92)
19083 42 2GYZ_A neurotrophic factor art 99.6 1.4E-19 1.2E-23 150.9 0.0 89 399-497 1-97 (105)
19084 43 6Q2S_B Ubiquitin-like protein 99.5 2.9E-18 2.5E-22 163.2 0.0 93 397-501 135-234 (235)
19085 44 6GFF_E Transforming growth fac 98.9 1.1E-13 1E-17 131.1 0.0 158 143-316 22-193 (249)
19086 45 6GFF_G Transforming growth fac 98.9 1.1E-13 1E-17 131.2 0.0 158 143-316 22-193 (249)
19087 46 5HLZ_E Inhibin beta A chain; G 98.7 1.8E-12 1.6E-16 124.5 0.0 155 143-317 41-227 (270)
19088 47 4YCG_B pro-BMP9 prodomain, hum 98.7 3.5E-12 3.2E-16 124.4 0.0 152 143-316 41-208 (296)
19089 48 4YCI_B mouse pro-BMP9 prodomai 98.7 3.5E-12 3.2E-16 124.4 0.0 152 143-316 41-208 (296)
19090 49 4NT5_A von Willebrand factor; 75.7 0.27 2.4E-05 38.0 0.0 65 422-501 37-101 (107)
19091 50 2KD3_A Sclerostin; Protein, an 73.5 0.35 3E-05 38.0 0.0 73 419-501 39-112 (113)
19092 51 4YU8_A Neuroblastoma suppresso 70.0 0.48 4.1E-05 38.5 0.0 88 398-501 32-120 (139)
19093 52 2K8P_A Sclerostin; WNT SIGNALL 66.7 0.66 5.3E-05 39.9 0.0 74 419-501 71-144 (189)
19094 53 4JPH_D Gremlin-2; Cystine knot 65.1 0.72 6E-05 37.9 0.0 88 398-501 51-138 (148)
19095 54 4X1J_B Neuroblastoma suppresso 64.2 0.74 6.5E-05 35.8 0.0 88 398-501 17-105 (116)
19096 55 5AEJ_A GREMLIN-1; SIGNALING PR 62.6 0.87 7.2E-05 37.6 0.0 87 397-501 59-147 (152)
19097 56 5HK5_G Gremlin-2, Growth/diffe 61.9 0.91 7.6E-05 37.2 0.0 86 398-501 50-137 (147)
19098 57 5BPU_A Frizzled-4; Wnt signall 57.8 1.2 0.0001 35.0 0.0 72 422-501 37-108 (122)
19099 58 5BQ8_C Norrin; Wnt signalling 54.0 1.5 0.00013 34.3 0.0 93 398-501 16-108 (122)
19100 59 5BQE_A Frizzled-4; Wnt signall 54.0 1.5 0.00013 34.3 0.0 93 398-501 16-108 (122)
19101
19102 No 1
19103 >5FFO_H Integrin alpha-V, Integrin beta-6, Transforming; Integrin, TGF-beta, CELL ADHESION; HET: MAN, NAG, BMA; 3.49A {Homo sapiens}
19104 Probab=100.00 E-value=2.3e-42 Score=353.27 Aligned_cols=315 Identities=24% Similarity=0.379 Sum_probs=194.7 Template_Neff=9.300
19105
19106 Q NP_000548.2 143 SFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGG----N--SSVKLEAGLANTITSFIDKGQDDRG-P 215 (501)
19107 Q Consensus 143 ~qIL~kLGL~~~P~~~~~~~~~~~~~~p~~MldLY~~~~~~~~~~~----~--~~~~~~~~~~n~Vrsf~~~~~~~~~-~ 215 (501)
19108 .+||++|||+++|+.+.. .+.+++++|++||+.+........ . ..+.+.....++++++......... .
19109 T Consensus 24 ~~IL~~LgL~~~P~~~~~----~~~~~p~~m~~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~~ 99 (363)
19110 T 5FFO_H 24 GQILSKLRLASPPSQGEV----PPGPLPEAVLALYNSTRDRVAGESAEPEPEPEADYYAKEVTRVLMVETHNEIYDKFKQ 99 (363)
19111 T ss_dssp HHHHHHTTCSSCCCSSSS----CSSCCCHHHHHHHHHHSCCCCC--------CCSSSSCEEEEEEECBCTTSSSTTTTCC
19112 T ss_pred HHHHHHcCCCCCCCCCCC----CCCCCCHHHHHHHHHHHhhccCCCCCCCCCCcccceeeeEEEEEEeecCccccccccc
19113 Confidence 689999999999987642 223568999999998765431100 0 0011222234556666533221100 1
19114
19115
19116 Q NP_000548.2 216 VVRKQRYVFDISA----LEK-DGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPAALLDVRSVPGLDGSG 290 (501)
19117 Q Consensus 216 ~~~~~~l~FnlSs----i~~-e~V~~AeLrLy~~~~~~~~~~~~~~~~~~~~v~Vy~~~~~~~~~~ll~s~~v~~~~~~g 290 (501)
19118 ......++|++++ ++. +.|.+|+||||+..... ...|.||..... ....+++++.+.....++
19119 T Consensus 100 ~~~~~~~~F~is~~~~~~~~~~~v~~AeLrl~~~~~~~-----------~~~v~iy~~~~~-~~~~~~~~~~~~~~~~~~ 167 (363)
19120 T 5FFO_H 100 STHSIYMFFQTSELREAVPEPVLLSRAELRLLRLKLKV-----------EQHVELYQKYSQ-NSWRYLSNRLLAPSDSPE 167 (363)
19121 T ss_dssp BTTEEEEEECSTTHHHHSCSGGGEEEEEEECCBCCCCS-----------CCEEEEEEEETT-TEEEEEEEEECCCCSSCC
19122 T ss_pred ccceEEEEEechhccccCCCchhhcHhhhHhhcCccCc-----------cEEEEEEEecCc-ccceeeEeEEeCCCCCCC
19123 Confidence 2345678999997 433 57999999999887532 345677765421 111233333221234579
19124
19125
19126 Q NP_000548.2 291 WEVFDIWKLFRNFKNSA--QLCLELEAWERG----RAVDLRGLGFDR------AARQVHEKALFLVFGRTKKRDLFFNEI 358 (501)
19127 Q Consensus 291 Wv~fDVT~aV~~Wl~~~--nlgL~V~~~~~~----~~~~v~~~~~~~------~~~~~~~~ppLLv~~~~~~~~~~~~~~ 358 (501)
19128 |+.||||.+|+.|+.++ ++||.|.+.... ....+...++.. .......+|+|++++.+....
19129 T Consensus 168 W~~fdVt~~v~~W~~~~~~n~gl~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lv~~~~~~~~~------ 241 (363)
19130 T 5FFO_H 168 WLSFDVTGVVRQWLSRGGEIEGFRLSAHCSCDSRDNTLQVDINGFTTGRRGDLATIHGMNRPFLLLMATPLERA------ 241 (363)
19131 T ss_dssp CCEEECHHHHHHHHHSCCSCEEEEEEECCBTTTTBCCCCCCBSCCTTTCCSSGGGGGGTTCCEEEEEECCTTTC------
19132 T ss_pred eEEEEcHHHHHHHHHcCCccccEEEEEEecCCCCCCceeeeeccccCCcccchhhccccCCcEEEEEeCchHHH------
19133 Confidence 99999999999999997 788886554311 111110101100 011124566666666432210
19134
19135
19136 Q NP_000548.2 359 KARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFK-DMGWDDWIIAPLEYEAFHCEGLCEFPL 437 (501)
19137 Q Consensus 359 ~~~~~~~~~~~~~~~~~~r~~rr~~~~~~~~~~~~~~~~~~Cc~~~l~V~F~-dlGW~~wIiaP~~~~a~yC~G~C~~~~ 437 (501)
19138 . ..+.+++ ||+. + ...+.......||+++++|+|+ ||||+ |||+|++|+||||.|.|+++.
19139 T Consensus 242 ----~--------~~~~~r~-rr~~---~-~~~~~~~~~~~Cc~~~l~V~F~~~lgw~-~iiaP~~~~a~~C~G~C~~~~ 303 (363)
19140 T 5FFO_H 242 ----Q--------HLQSSRH-RRAL---D-TNYCFSSTEKNCCVRQLYIDFRKDLGWK-WIHEPKGYHANFCLGPCPYIW 303 (363)
19141 T ss_dssp ----C-------------------------------CCSSSSEEECCCBCHHHHTCCC-SEEECCCBCCCEEECCCCCSC
19142 T ss_pred ----H--------hhhHHhh-Hhhc---c-cCCCCCCCcccceeeEEEEEccHHhCCc-eeeCCCeEEeeeccCCCCCcc
19143 Confidence 0 0000111 1110 1 1122233467899999999996 99998 999999999999999999997
19144
19145
19146 Q NP_000548.2 438 RSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19147 Q Consensus 438 ~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19148 .. +++|+.++++++...+..++.|||+|++|++|+|||+|++ .++++.++||+|++|||+
19149 T Consensus 304 ~~---~t~ha~i~~~~~~~~~~~~~~~CC~P~~~~~l~ily~d~~-~~~~~~~~~m~v~~CgC~ 363 (363)
19150 T 5FFO_H 304 SL---DTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGR-KPKVEQLSNMIVRSCKCS 363 (363)
19151 T ss_dssp SC---C-----CCSSCTTTCSSCCSSCCEEECCEEEEEEEECC-C-CCEEEEEEEEEECCEEEC
19152 T ss_pred cc---cccHHHHHHHHHhhCCCCCCCCCcccceeceeeEEEEeCC-eeEEEEecCcEEeccCCC
19153 Confidence 63 5688988888776555568999999999999999999987 588999999999999995
19154
19155
19156 No 2
19157 >3RJR_C Transforming growth factor beta-1; TGF beta, activation, integrin, Cytokine; HET: NAG; 3.05A {Sus scrofa}
19158 Probab=100.00 E-value=3.4e-42 Score=351.82 Aligned_cols=315 Identities=24% Similarity=0.389 Sum_probs=198.8 Template_Neff=9.400
19159
19160 Q NP_000548.2 143 SFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGG----NS--SVKLEAGLANTITSFIDKGQDDRG-P 215 (501)
19161 Q Consensus 143 ~qIL~kLGL~~~P~~~~~~~~~~~~~~p~~MldLY~~~~~~~~~~~----~~--~~~~~~~~~n~Vrsf~~~~~~~~~-~ 215 (501)
19162 .+||++|||+++|+.... .+.+++++|++||+.+........ .. .+.+......+++++......... .
19163 T Consensus 24 ~~IL~~LgL~~~P~~~~~----~~~~~p~~m~~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (363)
19164 T 3RJR_C 24 GQILSKLRLASPPSQGDV----PPGPLPEAVLALYNSTRDRVAGESVEPEPEPEADYYAKEVTRVLMVESGNQIYDKFKG 99 (363)
19165 T ss_pred HHHHHHcCCCCCCCCCCC----CCCCCCHHHHHHHHhhcccccCCcCCCCCCCcccccchhccceEeecCCcccccccCC
19166 Confidence 689999999999987641 223568999999997654321100 00 001111122333333221110000 1
19167
19168
19169 Q NP_000548.2 216 VVRKQRYVFDISAL----EK-DGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPAALLDVRSVPGLDGSG 290 (501)
19170 Q Consensus 216 ~~~~~~l~FnlSsi----~~-e~V~~AeLrLy~~~~~~~~~~~~~~~~~~~~v~Vy~~~~~~~~~~ll~s~~v~~~~~~g 290 (501)
19171 ......+.|+++++ +. +.|.+|+||||+..... ...+.||..... ....++.++.+.....++
19172 T Consensus 100 ~~~~~~~~F~~s~~~~~~~~~~~v~~AeL~l~~~~~~~-----------~~~v~iy~~~~~-~~~~~~~~~~~~~~~~~g 167 (363)
19173 T 3RJR_C 100 TPHSLYMLFNTSELREAVPEPVLLSRAELRLLRLKLKV-----------EQHVELYQKYSQ-DSWRYLSNRLLAPSDSPE 167 (363)
19174 T ss_pred CccEEEEEEEcccCCCCCCcchhceEEEEEEEeCCCCC-----------CceEEEEEecCh-hheeEEEEEEeccCCCCc
19175 Confidence 13466899999974 22 47999999999887542 235667754321 111233333221234579
19176
19177
19178 Q NP_000548.2 291 WEVFDIWKLFRNFKNSA--QLCLELEAWER--G--RAVDLRGLGFDR------AARQVHEKALFLVFGRTKKRDLFFNEI 358 (501)
19179 Q Consensus 291 Wv~fDVT~aV~~Wl~~~--nlgL~V~~~~~--~--~~~~v~~~~~~~------~~~~~~~~ppLLv~~~~~~~~~~~~~~ 358 (501)
19180 |+.|||+.+|+.|+.++ ++||.|.+... . ..+.+...++.. .......+|+|++++.+....
19181 T Consensus 168 W~~fdVt~~v~~W~~~~~~n~gl~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lv~~~~~~~~~------ 241 (363)
19182 T 3RJR_C 168 WLSFDVTGVVRQWLTRREAIEGFRLSAHCSCDSKDNTLHVEINGFNSGRRGDLATIHGMNRPFLLLMATPLERA------ 241 (363)
19183 T ss_pred EEEEECHHHHHHHHhCCcccCcEEEEEEEccCCCCceeeEEEccccCCCcCCcccccccCCCEEEEEEcCCccc------
19184 Confidence 99999999999999997 78888655321 1 111111001100 001124566666666432210
19185
19186
19187 Q NP_000548.2 359 KARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFK-DMGWDDWIIAPLEYEAFHCEGLCEFPL 437 (501)
19188 Q Consensus 359 ~~~~~~~~~~~~~~~~~~r~~rr~~~~~~~~~~~~~~~~~~Cc~~~l~V~F~-dlGW~~wIiaP~~~~a~yC~G~C~~~~ 437 (501)
19189 ...+.++ +||+. + ...+.......||+++++|+|+ ||||+ |||+|++|+||||.|.|+++.
19190 T Consensus 242 ------------~~~~~~r-~rr~~---~-~~~~~~~~~~~Ccr~~l~V~F~~~lgW~-wIiaP~~y~a~~C~G~C~~~~ 303 (363)
19191 T 3RJR_C 242 ------------QHLHSSR-HRRAL---D-TNYCFSSTEKNCCVRQLYIDFRKDLGWK-WIHEPKGYHANFCLGPCPYIW 303 (363)
19192 T ss_pred ------------ccccccc-ccccC---C-CCCCCCCCCCcccceeEEEecchhhCCc-eEecCCeEEeeeecccCCCCC
19193 Confidence 0000011 11110 1 1122223467899999999997 99997 999999999999999999997
19194
19195
19196 Q NP_000548.2 438 RSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19197 Q Consensus 438 ~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19198 .. .++|+.++++++...+..++.|||+|++|++|+|||+|++ ++++++++||+|++|||+
19199 T Consensus 304 ~~---~t~ha~i~~~~~~~~~~~~~~pCC~P~~~~~l~ily~d~~-~~~~~~~~~mvv~~CgC~ 363 (363)
19200 T 3RJR_C 304 SL---DTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGR-KPKVEQLSNMIVRSCKCS 363 (363)
19201 T ss_pred CC---cCcHHHHHHHHHhcCCCCCCCCcccccccCceEEEEEcCC-cEEEEEeCCeEEeeccCC
19202 Confidence 63 5689999988876555578999999999999999999987 588999999999999995
19203
19204
19205 No 3
19206 >5VQF_C Transforming growth factor beta-1; pro-complex, latency, homodimer, PROTEIN BINDING; HET: NAG, BMA; 2.9A {Sus scrofa}
19207 Probab=100.00 E-value=3.4e-42 Score=351.78 Aligned_cols=315 Identities=24% Similarity=0.389 Sum_probs=197.2 Template_Neff=9.400
19208
19209 Q NP_000548.2 143 SFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGG----NS--SVKLEAGLANTITSFIDKGQDDRG-P 215 (501)
19210 Q Consensus 143 ~qIL~kLGL~~~P~~~~~~~~~~~~~~p~~MldLY~~~~~~~~~~~----~~--~~~~~~~~~n~Vrsf~~~~~~~~~-~ 215 (501)
19211 .+||++|||+++|++... .+.+++++|++||+.+........ .. .+.+.....++++++......... .
19212 T Consensus 24 ~~IL~~LgL~~~P~~~~~----~~~~~p~~m~~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (363)
19213 T 5VQF_C 24 GQILSKLRLASPPSQGDV----PPGPLPEAVLALYNSTRDRVAGESVEPEPEPEADYYAKEVTRVLMVESGNQIYDKFKG 99 (363)
19214 T ss_dssp HHHHHHTTCSSCCCCTTC----CCSCCCHHHHHHHHHHHCCCBCC-------CCCCSSCEEEEEEECCCSSSSTTTSSTT
19215 T ss_pred HHHHHHcCCCCCCCCCCC----CCCCCCHHHHHHHHHHhhhcCCCCCCCCCCChhhheeeEEEEEEEeecCCceecccCC
19216 Confidence 689999999999987641 223568999999997655421100 00 001111122333333221110000 1
19217
19218
19219 Q NP_000548.2 216 VVRKQRYVFDISAL----EK-DGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPAALLDVRSVPGLDGSG 290 (501)
19220 Q Consensus 216 ~~~~~~l~FnlSsi----~~-e~V~~AeLrLy~~~~~~~~~~~~~~~~~~~~v~Vy~~~~~~~~~~ll~s~~v~~~~~~g 290 (501)
19221 ......+.|+++++ +. +.|.+|+||||+..... ...+.||..... ....++.++.+.....++
19222 T Consensus 100 ~~~~~~l~F~~s~~~~~~~~~~~v~~AeL~l~~~~~~~-----------~~~v~iy~~~~~-~~~~~~~~~~~~~~~~~g 167 (363)
19223 T 5VQF_C 100 TPHSLYMLFNTSELREAVPEPVLLSRAELRLLRLKLKV-----------EQHVELYQKYSQ-DSWRYLSNRLLAPSDSPE 167 (363)
19224 T ss_dssp CTTEEEEEEEHHHHHHHCSSGGGEEEEEEEEEECCCSS-----------CEEEEEEEECSS-SCEEEEEEEEECCCSSCE
19225 T ss_pred CCCeEEEEEEhhhccccCCCccceeeeEEEEEEcCCcc-----------ceEEEEEEecCc-ccceeEEeEEeCCCCCCC
19226 Confidence 13466899999974 22 47999999999887542 245667754321 111233333221234579
19227
19228
19229 Q NP_000548.2 291 WEVFDIWKLFRNFKNSA--QLCLELEAWER--G--RAVDLRGLGFDR------AARQVHEKALFLVFGRTKKRDLFFNEI 358 (501)
19230 Q Consensus 291 Wv~fDVT~aV~~Wl~~~--nlgL~V~~~~~--~--~~~~v~~~~~~~------~~~~~~~~ppLLv~~~~~~~~~~~~~~ 358 (501)
19231 |+.|||+.+|+.|+.++ +++|.|.+... . ..+.+...++.. .......+|+|++++.+....
19232 T Consensus 168 W~~fdvt~~v~~W~~~~~~n~gl~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lvi~~~~~~~~------ 241 (363)
19233 T 5VQF_C 168 WLSFDVTGVVRQWLTRREAIEGFRLSAHCSCDSKDNTLHVEINGFNSGRRGDLATIHGMNRPFLLLMATPLERA------ 241 (363)
19234 T ss_dssp EEEEECHHHHHHHHHCCCSEEEEEEEECEEEEEETTEEEEEEC------CCCSBCCSSTTCCEEEEEECCSTTT------
19235 T ss_pred eEEEEcHHHHHHHHhhchhcCCEEEEEEeecCCCCCceeeEEccccCCCccchhhccccCCcEEEEEEChhHHh------
19236 Confidence 99999999999999997 78888655321 1 111111001100 001124566666666432110
19237
19238
19239 Q NP_000548.2 359 KARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFK-DMGWDDWIIAPLEYEAFHCEGLCEFPL 437 (501)
19240 Q Consensus 359 ~~~~~~~~~~~~~~~~~~r~~rr~~~~~~~~~~~~~~~~~~Cc~~~l~V~F~-dlGW~~wIiaP~~~~a~yC~G~C~~~~ 437 (501)
19241 ...+.++ +||+. . ...+.......||+++++|+|+ ||||| |||+|++|+||||.|.|+++.
19242 T Consensus 242 ------------~~~~~~r-~rr~~---~-~~~~~~~~~~~Ccr~~l~V~F~~~lgWd-wIiaP~~y~a~~C~G~C~~~~ 303 (363)
19243 T 5VQF_C 242 ------------QHLHSSR-HRRAL---D-TNYCFSSTEKNCCVRQLYIDFRKDLGWK-WIHEPKGYHANFCLGPCPYIW 303 (363)
19244 T ss_dssp ------------CC---------CE---E-HHHHTTSCCSSSEEECCEEETTTTTCCC-CEEECSEEECCEEECCCCCTT
19245 T ss_pred ------------hccchhh-hhhcc---C-cCccCCCCCccceeeEEEEEcchhhCCc-eeeCCCeEEeEeecCCCCCcC
19246 Confidence 0000011 11110 1 1122223467899999999997 99997 999999999999999999997
19247
19248
19249 Q NP_000548.2 438 RSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19250 Q Consensus 438 ~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19251 .. .++|+.++++++...+..++.|||+|++|++|+|||+|++ +++++.++||+|++|||+
19252 T Consensus 304 ~~---~t~ha~v~~~~~~~~~~~~~~pCC~P~~~~~l~ily~d~~-~~~~~~~~~miv~~CgC~ 363 (363)
19253 T 5VQF_C 304 SL---DTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGR-KPKVEQLSNMIVRSCKCS 363 (363)
19254 T ss_dssp TS---CSCCHHHHTGGGGCCGGGSSSCCEEESSEEEEEEEEEETT-EEEEEEEEEEEECEEEEC
19255 T ss_pred Cc---cccHHHHHHHHHhcCCCCCCCCCccCcccceeeEEEEECC-eeEEEEecCcEEeccCCC
19256 Confidence 63 5689999988876555578999999999999999999987 588999999999999995
19257
19258
19259 No 4
19260 >5NTU_A Growth/differentiation factor 8; growth factor, signalling protein, TGFbeta; HET: EDO; 2.58A {Homo sapiens}
19261 Probab=100.00 E-value=9.5e-42 Score=343.78 Aligned_cols=309 Identities=22% Similarity=0.402 Sum_probs=196.1 Template_Neff=9.900
19262
19263 Q NP_000548.2 142 SSFLLKKAREPGPPREPKEPFR-P-PPITPHEYMLSLYRTLSDADRKGGNSSVKLEAGLANTITSFIDKGQDDRGPVVRK 219 (501)
19264 Q Consensus 142 ~~qIL~kLGL~~~P~~~~~~~~-~-~~~~~p~~MldLY~~~~~~~~~~~~~~~~~~~~~~n~Vrsf~~~~~~~~~~~~~~ 219 (501)
19265 -.+||++|||+++|++....++ . +..+++++|+++|+.+....... ...++++...+++|++|..............
19266 T Consensus 17 k~~IL~~LgL~~~P~~~~~~~~~~~~~~~~~~~l~~~y~~~~~~~~~~-~~~~~~~~~~~~~v~~f~~~~~~~~~~~~~~ 95 (335)
19267 T 5NTU_A 17 KIQILSKLRLETAPNISKDVIRQLLPKAPPLRELIDQYDVQRDDSSDG-SLEDDDYHATTETIITMPTESDFLMQVDGKP 95 (335)
19268 T ss_pred HHHHHHHcCCCCCCCCCCCCCcccCCCCCchHHHHHHHhhccCCCCCC-CCcccchhcccceEEEeccCCCcccCCCCCC
19269 Confidence 4689999999999998763110 0 11225799999999765432110 0011223345567888865432210001245
19270
19271
19272 Q NP_000548.2 220 QRYVFDISALEK-DGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGR---QPAALLDVRSVP-GLDGSGWEVF 294 (501)
19273 Q Consensus 220 ~~l~FnlSsi~~-e~V~~AeLrLy~~~~~~~~~~~~~~~~~~~~v~Vy~~~~~~---~~~~ll~s~~v~-~~~~~gWv~f 294 (501)
19274 ..++|+++++.. +.|.+|+||||+...... ....+.||...... .....+....+. ....++|++|
19275 T Consensus 96 ~~~~F~ls~~~~~~~v~~AeL~l~~~~~~~~---------~~~~v~vy~v~~~~~~~~~~~~~~~~~~~~~~~~~gW~~f 166 (335)
19276 T 5NTU_A 96 KCCFFKFSSKIQYNKVVKAQLWIYLRPVETP---------TTVFVQILRLIKPMKDGTRYTGIRSLKLDMNPGTGIWQSI 166 (335)
19277 T ss_pred eEEEEECCCCCCCcceeEEEEEEEECCCCCC---------CeEEEEEEEEEccCcCCceeeeeeEEEEEccCCCCcEEEE
19278 Confidence 678999997654 589999999999875431 13456666543210 000011111111 1234699999
19279
19280
19281 Q NP_000548.2 295 DIWKLFRNFKNSA--QLCLELEAWERG-RAVDLRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKARSGQDDKTVYE 371 (501)
19282 Q Consensus 295 DVT~aV~~Wl~~~--nlgL~V~~~~~~-~~~~v~~~~~~~~~~~~~~~ppLLv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (501)
19283 |||.+|++|+.++ ++||.|.+...+ ....+ .+.... ....+|+|++++.+..
19284 T Consensus 167 dVt~~v~~W~~~~~~n~gl~v~~~~~~~~~~~~---~~~~~~-~~~~~P~Lvi~~~~~~--------------------- 221 (335)
19285 T 5NTU_A 167 DVKTVLQNWLAAPASNLGIEIKALDENGHDLAV---TFPGPG-EDGLNPFLEVKVTDTP--------------------- 221 (335)
19286 T ss_pred EcHHHHHHHHHCCccCceEEEEEEeCCCCeEee---ecCCCC-CcccCcEEEEEecCCC---------------------
19287 Confidence 9999999999986 789988775432 11111 111111 1234555555542110
19288
19289
19290 Q NP_000548.2 372 YLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQT 451 (501)
19291 Q Consensus 372 ~~~~~r~~rr~~~~~~~~~~~~~~~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~ 451 (501)
19292 .++ +|. ....|........||+++++|+|+||||+ |||+|++|+||||.|.|+++.... ++|+.
19293 T Consensus 222 ----~~~-~r~----~~~~~~~~~~~~~Ccr~~l~V~F~~igW~-wIiaP~~y~a~~C~G~C~~~~~~~---~~~~~--- 285 (335)
19294 T 5NTU_A 222 ----KRS-RRD----FGLDCDEHSTESRCCRYPLTVDFEAFGWD-WIIAPKRYKANYCSGECEFVFLAA---YPHTH--- 285 (335)
19295 T ss_pred ----ccc-ccc----CCCCCCCCCCCCCceeeEEEEEHHHcCCc-eeecCCeEEeEeeCccCCCCcccc---CCCch---
19296 Confidence 111 111 10123233357899999999999999998 999999999999999999998642 24442
19297
19298
19299 Q NP_000548.2 452 LMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19300 Q Consensus 452 ~~~~~~~~~~~~pCC~P~~~~~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19301 +++...+...+.|||+|++|++|+|||+|++++++++.++||+|++|||+
19302 T Consensus 286 ~~~~~~~~~~~~pCC~P~~~~~l~ily~~~~~~i~~~~~~~mvv~~CgC~ 335 (335)
19303 T 5NTU_A 286 LVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCGCS 335 (335)
19304 T ss_pred hHhccCCCCCCCCcccceeccceEEEEECCCCCEEEEEeCCceeeccccC
19305 Confidence 23333333578999999999999999999887889999999999999995
19306
19307
19308 No 5
19309 >5HLY_A Inhibin beta A chain; Growth factor, Precursor, Signalling, Signaling; HET: MSE; 2.302A {Homo sapiens}
19310 Probab=100.00 E-value=3e-39 Score=332.69 Aligned_cols=307 Identities=21% Similarity=0.407 Sum_probs=167.2 Template_Neff=8.800
19311
19312 Q NP_000548.2 142 SSFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKG------GN----SSVKLEAGLANTITSFIDKGQD 211 (501)
19313 Q Consensus 142 ~~qIL~kLGL~~~P~~~~~~~~~~~~~~p~~MldLY~~~~~~~~~~------~~----~~~~~~~~~~n~Vrsf~~~~~~ 211 (501)
19314 =.+||++|||+++|+++.. . +.+..+..+|+.+....... .+ .+.+.+...++.|+.|....
19315 T Consensus 40 K~~IL~kLgL~~~P~~~~~----~--p~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ii~f~~~~-- 111 (383)
19316 T 5HLY_A 40 KKHILNMLHLKKRPDVTQP----V--PKAALLNAIRKLHVGKVGENGYVEIEDDIGRRAEMNELMEQTSEIITFAESG-- 111 (383)
19317 T ss_dssp HHHHHHHTTCSSCCCCCCC----S--CHHHHHHHHHHTTSEEECGGGCEEETTCHHHHHHHHHHHHTEEEEEEECEEC--
19318 T ss_pred HHHHHHHcCCCCCCCCCCC----C--CCHHHHHHHHHhhcCCCCCCCcccccCCCCCCCCccccccceeEEEEECcCC--
19319 Confidence 3689999999999998752 1 11222234565443211000 00 00112223456666665432
19320
19321
19322 Q NP_000548.2 212 DRGPVVRKQRYVFDISALE-K-DGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGR----------------- 272 (501)
19323 Q Consensus 212 ~~~~~~~~~~l~FnlSsi~-~-e~V~~AeLrLy~~~~~~~~~~~~~~~~~~~~v~Vy~~~~~~----------------- 272 (501)
19324 .....++|++++.+ . +.|.+||||||+....... ......|.||......
19325 T Consensus 112 -----~~~~~l~F~iS~~~~~~~~V~~AeL~l~~~~~~~~~------~~~~~~V~vy~~~~~~~~~~~~~~~~~~~~~~~ 180 (383)
19326 T 5HLY_A 112 -----TARKTLHFEISKEGSDLSVVERAEVWLFLKVPKANR------TRTKVTIRLFQQQKHPQGSLDTGEEAEEVGLKG 180 (383)
19327 T ss_dssp -----SSTTEEEEHCCE-------EEEEEEEEEEECS----------------------------------SC----CEC
19328 T ss_pred -----CCeEEEEEEcCCCCCCcceeEEEEEEEEecCCCCCC------CCceEEEEEEEEecCCCCCCCCcchhHhhcCCc
19329 Confidence 13567899999754 2 4699999999998764320 1124567777543210
19330
19331
19332 Q NP_000548.2 273 -QPAALLDVRSVPGLDGSGWEVFDIWKLFRNFKNSA--QLCLELEAWERGR-AVDLRGLGFDRAARQVHEKALFLVFGRT 348 (501)
19333 Q Consensus 273 -~~~~ll~s~~v~~~~~~gWv~fDVT~aV~~Wl~~~--nlgL~V~~~~~~~-~~~v~~~~~~~~~~~~~~~ppLLv~~~~ 348 (501)
19334 ....++.++.+ ....++|++||||.+|+.|+.++ +++|.|.+..... ...+ ...........+|+|++++.+
19335 T Consensus 181 ~~~~~l~~s~~i-~~~~~gWi~fdVt~~V~~Wl~~~~~n~gl~v~~~~~~~~~~~l---~~~~~~~~~~~~P~Lvi~~~~ 256 (383)
19336 T 5HLY_A 181 ERSELLLSEKVV-DARKSTWHVFPVSSSIQRLLDQGKSSLDVRIACEQCQESGASL---VLLGEEKEQSHRPFLMLQARQ 256 (383)
19337 T ss_dssp CEEEEEEEEEEE-ECSSCEEEEEECHHHHHHHHHTTCCEEEEEEECTTTTTTTCEE---ECSCCGGGGGGCCEEEEEEEC
19338 T ss_pred ccceEEEEEEEE-eCCCCcEEEEEcHHHHHHHHhCCccCcceEEEEEcCCCCCceE---EEecCCCccccccEEEEEEcC
19339 Confidence 00112333333 23457999999999999999987 7888877653221 1101 000011112356666666532
19340
19341
19342 Q NP_000548.2 349 KKRDLFFNEIKARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFH 428 (501)
19343 Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~rr~~~~~~~~~~~~~~~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~y 428 (501)
19344 ... . +++++++ . ..| ......||+++++|+|+||||++|||+|++|+|+|
19345 T Consensus 257 ~~~----------------------~-~~rr~~~----~-~~~--~~~~~~Cc~~~~~V~F~~lgw~~wIiaP~~y~a~~ 306 (383)
19346 T 5HLY_A 257 SED----------------------H-PHRRRRR----G-LEC--DGKVNICCKKQFFVSFKDIGWNDWIIAPSGYHANY 306 (383)
19347 T ss_dssp C-------------------------------------C-CBC--SSCSSBCEEECCEEETTTTTCTTTEEECSEEECCE
19348 T ss_pred ccc----------------------c-ccccccc----C-CCC--CCCCcccccceeeecHHHhCCcceeecCCEEEcee
19349 Confidence 110 0 0111111 0 112 12468999999999999999988999999999999
19350
19351
19352 Q NP_000548.2 429 CEGLCEFPLRSHLE--PTNHAVIQTLMNS--MDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19353 Q Consensus 429 C~G~C~~~~~~~~~--~~~h~~i~~~~~~--~~~~~~~~pCC~P~~~~~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19354 |.|.|+.+.....+ .++|+.+...+.. ..+...+.|||+|++|++++|||+|++++++++.++||+|++|||+
19355 T Consensus 307 C~G~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pCC~P~~~~~l~ily~~~~~~i~~~~~~~mvv~~CgC~ 383 (383)
19356 T 5HLY_A 307 CEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPTKLRPMSMLYYDDGQNIIKKDIQNMIVEECGCS 383 (383)
19357 T ss_dssp EESBCC---------C---SCCC---------------CCCEEEEEEEEEEEEEES-SSCEEEEEEEEEEEEEEEEC
19358 T ss_pred ecccCCCCCCCCCCCcccHHHHHHHHHHhcCCCCCcCCCCcccccccCceEEEEEcCCCcEEEEEeCCcEEeecccC
19359 Confidence 99999998653211 1235433332211 1123568999999999999999999987889999999999999995
19360
19361
19362 No 6
19363 >6SF3_B Serine/threonine-protein kinase receptor R3 (E.C.2.7.11.30); BMP10, ALK1, complex, signalling, TGFbeta; 2.3000067422A {Homo sapiens}
19364 Probab=99.85 E-value=1.5e-26 Score=194.74 Aligned_cols=105 Identities=48% Similarity=1.049 Sum_probs=89.1 Template_Neff=8.600
19365
19366 Q NP_000548.2 397 KARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISI 476 (501)
19367 Q Consensus 397 ~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~i 476 (501)
19368 ...||+++++|+|+||||++|||+|++|+++||.|.|..+....++.++|+.++.+++...+.....|||+|++|++++|
19369 T Consensus 4 ~~~C~~~~~~V~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~t~h~~~~~~~~~~~~~~~~~~CC~P~~~~~l~i 83 (108)
19370 T 6SF3_B 4 GNYCKRTPLYIDFKEIGWDSWIIAPPGYEAYECRGVCNYPLAEHLTPTKHAIIQALVHLKNSQKASKACCVPTKLEPISI 83 (108)
19371 T ss_dssp -CBSEEECCEEETTTTTGGGTEEECSEEECCEEESBBCSSCCGGGCCCHHHHHHHHHHHHCTTTSCCBCEEEEEEEEEEE
19372 T ss_pred CCcceEEEeEeeHHHhCCCceeeCCCceeceeeccccCCCCCCCCCCCchHHHHHHHHhhCccccCCCcccceecCceEE
19373 Confidence 56899999999999999988999999999999999999987643334578877776654434467899999999999999
19374
19375
19376 Q NP_000548.2 477 LFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19377 Q Consensus 477 ly~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19378 ||+++++.++.+.++||+|++|||+
19379 T Consensus 84 l~~~~~~~~~~~~~~~~~v~~C~C~ 108 (108)
19380 T 6SF3_B 84 LYLDKGVVTYKFKYEGMAVSECGCR 108 (108)
19381 T ss_dssp EEEETTEEEEEEEEEEEEEEEEEEC
19382 T ss_pred EEEECCeeEEEEEECCeEEeecccC
19383 Confidence 9999875555678999999999995
19384
19385
19386 No 7
19387 >4MPL_A Growth/differentiation factor 2; growth factor/cytokine, CYTOKINE; 1.9A {Homo sapiens}
19388 Probab=99.84 E-value=2.3e-26 Score=196.32 Aligned_cols=106 Identities=50% Similarity=1.028 Sum_probs=90.4 Template_Neff=7.900
19389
19390 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19391 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19392 ....||+++++|+|+||||++|||+|++|+++||.|.|..+.....+.++|++++.+++...+.....|||+|++|++++
19393 T Consensus 10 ~~~~C~~~~l~V~F~dlgw~~~Ii~P~~~~~~yC~G~C~~~~~~~~~~t~ha~i~~~~~~~~~~~~~~~CC~P~~~~~l~ 89 (116)
19394 T 4MPL_A 10 AGSHCQKTSLRVNFEDIGWDSWIIAPKEYEAYECKGGCFFPLADDVTPTKHAIVQTLVHLKFPTKVGKACCVPTKLSPIS 89 (116)
19395 T ss_dssp CCCCCEEECCEEETTTTTCTTTEEECSEEECCEEESCCCSSCCTTCCCCHHHHHHHHHHHHSTTTSCCCCEEEEEEEEEE
19396 T ss_pred CCCCCEEEEEEEeHHHhCCCCCeeCCCeeEeEEEcccCCCCCCCCCCCCchHHHHHHHhhcCCccCCCCceeeeEecCeE
19397 Confidence 35789999999999999998899999999999999999998765333457787777665443446789999999999999
19398
19399
19400 Q NP_000548.2 476 ILFIDSANNVVYK-QYEDMVVESCGCR 501 (501)
19401 Q Consensus 476 ily~d~~~~~~~~-~~~~mvv~~CgC~ 501 (501)
19402 |||+++++.++++ .++||+|++|+|+
19403 T Consensus 90 ily~~~~~~~~~~~~~~~mvv~~CgC~ 116 (116)
19404 T 4MPL_A 90 VLYKDDMGVPTLKYHYEGMSVAECGCR 116 (116)
19405 T ss_dssp EEEECSSSCEEEEEEEEEEEEEEEEEC
19406 T ss_pred EEEECCCCcEEEEEEECCeEEeccccC
19407 Confidence 9999988666666 8999999999995
19408
19409
19410 No 8
19411 >6Z3J_B Growth/differentiation factor 5, RGM domain; Repulsive Guidance Molecule, RGM, Bone; HET: SO4, GOL, NAG, EDO; 1.65A {Homo sapiens}
19412 Probab=99.84 E-value=2.6e-26 Score=196.21 Aligned_cols=107 Identities=98% Similarity=1.618 Sum_probs=92.0 Template_Neff=8.300
19413
19414 Q NP_000548.2 395 NLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPI 474 (501)
19415 Q Consensus 395 ~~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l 474 (501)
19416 .....||+++++|+|+||||++|||+|++|+++||.|.|..+.....+.++|+.++.+++...+.....|||+|++|+++
19417 T Consensus 11 ~~~~~Cc~~~~~V~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~t~h~~i~~~~~~~~~~~~~~~cC~P~~~~~l 90 (117)
19418 T 6Z3J_B 11 NLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPI 90 (117)
19419 T ss_dssp -CCCBSEEECCEEETTTTTGGGTEEECSEEECCEEESBCCSSCCGGGCCCHHHHHHHHHHHHCTTTSCCCCEEEEEEEEE
19420 T ss_pred CCCCcceeEEEEEeHHHcCCCccEEcCCeeeceeeeecCCCCccccCCCChHHHHHHHHHhcCCCCCCCCcccceeecce
19421 Confidence 34789999999999999999889999999999999999999876433345788777766544445678999999999999
19422
19423
19424 Q NP_000548.2 475 SILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19425 Q Consensus 475 ~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19426 +|+|+++++.++++.++||+|++|||+
19427 T Consensus 91 ~ily~~~~~~~~~~~~~~~~v~~CgC~ 117 (117)
19428 T 6Z3J_B 91 SILFIDSANNVVKKDYEDMVVESCGCR 117 (117)
19429 T ss_dssp EEEEECTTSCEEEEEEEEEEEEEEEEC
19430 T ss_pred EEEEEcCCCcEEEEEECCeEEeeccCC
19431 Confidence 999999877788999999999999995
19432
19433
19434 No 9
19435 >5I05_A Growth/differentiation factor 2; GROWTH DIFFERENTIATION FACTOR 2, CELL; HET: GOL; 1.87A {Homo sapiens}
19436 Probab=99.84 E-value=4e-26 Score=192.88 Aligned_cols=106 Identities=50% Similarity=1.028 Sum_probs=90.1 Template_Neff=8.400
19437
19438 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19439 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19440 ....||+++++|+|+||||++|||+|++|+++||.|.|..+....++.++|+.++.+++...+.....|||+|++|++++
19441 T Consensus 4 ~~~~C~~~~~~V~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~CC~P~~~~~l~ 83 (110)
19442 T 5I05_A 4 AGSHCQKTSLRVNFEDIGWDSWIIAPKEYEAYECKGGCFFPLADDVTPTKHAIVQTLVHLKFPTKVGKACCVPTKLSPIS 83 (110)
19443 T ss_dssp CCCBSEEECCEEETTTTTCTTTEEECSEEECCEEESBCCSSCCGGGCCCHHHHHHHHHHHHCTTTSCCCCEEEEEEEEEE
19444 T ss_pred CCCcceeEEEEEeHHHhCCCCcEeCCCccccEeecCCCCCCCCCCCCCChhHHHHHHHhhcCCCCCCCcccceeeecceE
19445 Confidence 35789999999999999998899999999999999999998764333457777776655443456789999999999999
19446
19447
19448 Q NP_000548.2 476 ILFIDSANNVVYK-QYEDMVVESCGCR 501 (501)
19449 Q Consensus 476 ily~d~~~~~~~~-~~~~mvv~~CgC~ 501 (501)
19450 |||+|++++++++ .++||+|++|||+
19451 T Consensus 84 il~~~~~~~~~~~~~~~dm~v~~CgC~ 110 (110)
19452 T 5I05_A 84 VLYKDDMGVPTLKYHYEGMSVAECGCR 110 (110)
19453 T ss_dssp EEEECTTSCEEEEEEEEEEEEEEEEEC
19454 T ss_pred EEEECCCCcEEEEEEeCCeEEeecccC
19455 Confidence 9999998766666 8999999999995
19456
19457
19458 No 10
19459 >4N1D_A Bone morphogenetic protein 2; Cytokine, Signaling Protein; 1.912A {Homo sapiens}
19460 Probab=99.84 E-value=4.5e-26 Score=194.45 Aligned_cols=106 Identities=52% Similarity=1.077 Sum_probs=90.5 Template_Neff=8.300
19461
19462 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19463 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19464 ....||+++++|+|+||||++|||+|++|+++||.|.|..+.....+.++|+.++.+++...+.....|||+|++|++++
19465 T Consensus 11 ~~~~Cc~~~~~v~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~t~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 90 (116)
19466 T 4N1D_A 11 LKSSCKRHPLYVDFNLIGWGSWIIYPKQYNAYRCEGECPNPVGEEFHPTNHAYIQSLLKRYQPHRVPSTCCVPTELSAIS 90 (116)
19467 T ss_dssp -C-BSEEECCEEETTTTTCTTTEEECSEEECCEEESBCCSSCCGGGCCCHHHHHHHHHHHHCTTTSCCCCEEEEEEEEEE
19468 T ss_pred CCCcceeEEEEEEHHHhCCCCCEeCCCeeeceeeeEeCCCCCccCCCCChhHHHHHHHHhcCCCCCCCCceecceecceE
19469 Confidence 46789999999999999998899999999999999999988764333457887777765444446789999999999999
19470
19471
19472 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19473 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19474 |+|+++++.++++.++||+|.+|||+
19475 T Consensus 91 il~~~~~~~~~~~~~~~~~v~~C~C~ 116 (116)
19476 T 4N1D_A 91 MLYLDENEKVVLKNYQDMVVEGCGCR 116 (116)
19477 T ss_dssp EEEECTTCCEEEEEEEEEEEEEEEEC
19478 T ss_pred EEEECCCCcEEEEEeCCeEEeccccC
19479 Confidence 99999877788999999999999995
19480
19481
19482 No 11
19483 >2QCQ_B Bone morphogenetic protein 3; BMP, TGF-beta, SIGNALING PROTEIN; 2.21A {Homo sapiens}
19484 Probab=99.83 E-value=5.7e-26 Score=191.87 Aligned_cols=105 Identities=46% Similarity=1.054 Sum_probs=89.3 Template_Neff=8.500
19485
19486 Q NP_000548.2 397 KARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMD-PESTPPTCCVPTRLSPIS 475 (501)
19487 Q Consensus 397 ~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~-~~~~~~pCC~P~~~~~l~ 475 (501)
19488 ...||+++++|+|+||||++|||+|++|+++||.|+|..+.....+.++|+.++.+++... ......|||+|++|++++
19489 T Consensus 5 ~~~Cc~~~~~v~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~CC~P~~~~~l~ 84 (110)
19490 T 2QCQ_B 5 PRNCARRYLKVDFADIGWSEWIISPKSFDAYYCSGACQFPMPKSLKPSNHATIQSIVRAVGVVPGIPEPCCVPEKMSSLS 84 (110)
19491 T ss_dssp CSBSEEECCEEEGGGTTCTTTEEECSEEECCEEECBCCSSCCGGGCCCHHHHHHHHHHHSSCSTTCCCCCEEESSEEEEE
19492 T ss_pred CCcceeeEEEEeHHHhCCCcceeCCCeecceeeceeCCCCCCccCCCCcHHHHHHHHHHhCCCCCCCCCceeeEEeCceE
19493 Confidence 4689999999999999998899999999999999999998754333457777777655332 134679999999999999
19494
19495
19496 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19497 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19498 |||++++++++++.++||+|++|||+
19499 T Consensus 85 il~~~~~~~~~~~~l~~~~v~~CgC~ 110 (110)
19500 T 2QCQ_B 85 ILFFDENKNVVLKVYPNMTVESCACR 110 (110)
19501 T ss_dssp EEEECTTCCEEEEEEEEEEECCEEEC
19502 T ss_pred EEEEcCCCcEEEEEECCeEEeccccC
19503 Confidence 99999887788899999999999995
19504
19505
19506 No 12
19507 >1LXI_A BONE MORPHOGENETIC PROTEIN 7; Cystine-knot growth factor, HORMONE-GROWTH FACTOR; HET: NAG; 2.0A {Homo sapiens} SCOP: g.17.1.2
19508 Probab=99.83 E-value=9e-26 Score=198.70 Aligned_cols=111 Identities=48% Similarity=1.063 Sum_probs=90.2 Template_Neff=7.500
19509
19510 Q NP_000548.2 391 RPSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTR 470 (501)
19511 Q Consensus 391 ~~~~~~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~ 470 (501)
19512 +........||+++++|+|++|||++|||+|++|+++||.|.|..+.....+.++|++++.+++...+.....|||+|++
19513 T Consensus 29 ~~~~~~~~~C~~~~~~V~f~~igw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~t~h~~i~~l~~~~~~~~~~~~CC~P~~ 108 (139)
19514 T 1LXI_A 29 NSSSDQRQACKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMNATNHAIVQTLVHFINPETVPKPCCAPTQ 108 (139)
19515 T ss_dssp -------CBSEEECCEEEHHHHTCTTTEEECSEEECCEEESBCCSSCCGGGCCCHHHHHHHHHHHHCTTTCCCCCEEEEE
19516 T ss_pred cCCccccccceeeeeeccHHHhCCCCceecCCceeeeEecccCCCCcccccCCCHHHHHHHHHHhhCCCCCCCCceeeee
19517 Confidence 33445678999999999999999988999999999999999999887543234577777776654434467899999999
19518
19519
19520 Q NP_000548.2 471 LSPISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19521 Q Consensus 471 ~~~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19522 |++++|||+++++.++++.++||+|++|||+
19523 T Consensus 109 ~~~l~ily~d~~~~i~~~~l~~mvv~~CgC~ 139 (139)
19524 T 1LXI_A 109 LNAISVLYFDDSSNVILKKYRNMVVRACGCH 139 (139)
19525 T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEEEEEEC
19526 T ss_pred eCceEEEEECCCCCEEEEEEcCeEEecccCC
19527 Confidence 9999999999877788999999999999995
19528
19529
19530 No 13
19531 >6OMN_G Bone morphogenetic protein 2; BMP, Bone Mophogenetic Protein, CYTOKINE; HET: BMA, MAN, NAG; 2.68A {Homo sapiens}
19532 Probab=99.83 E-value=9.8e-26 Score=189.80 Aligned_cols=105 Identities=57% Similarity=1.165 Sum_probs=89.4 Template_Neff=8.400
19533
19534 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19535 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19536 ....||+++++|+|+||||++|||+|++|+++||.|.|..+.....+.++|+.++.+++... ...+.|||+|++|++++
19537 T Consensus 4 ~~~~Cc~~~~~V~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~~~h~~~~~~~~~~~-~~~~~~CC~P~~~~~l~ 82 (108)
19538 T 6OMN_G 4 LKSSCKRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVN-SKIPKACCVPTELSAIS 82 (108)
19539 T ss_pred CCCCcEEEEeEEehHHcCCCccEECCCeeeeEEEcccCCCCCccccCCCchHHHHHHHhcCC-CCCCCCceeEEeeCceE
19540 Confidence 35789999999999999998899999999999999999988654333456777776654432 35689999999999999
19541
19542
19543 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19544 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19545 |||+++++.++++.++||+|++|||+
19546 T Consensus 83 ily~~~~~~~~~~~~~~m~v~~CgC~ 108 (108)
19547 T 6OMN_G 83 MLYLDENEKVVLKNYQDMVVEGCGCR 108 (108)
19548 T ss_pred EEEECCCCcEEEEEeCCeEEeccccC
19549 Confidence 99999877788999999999999995
19550
19551
19552 No 14
19553 >2R53_A Bone morphogenetic protein 6; BMP6, Vgr, TGF-beta ligand, Chondrogenesis; HET: MPD; 2.1A {Homo sapiens}
19554 Probab=99.83 E-value=9.9e-26 Score=192.30 Aligned_cols=106 Identities=49% Similarity=1.068 Sum_probs=89.6 Template_Neff=8.200
19555
19556 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19557 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19558 ....||+++++|+|+||||++|||+|++|+++||.|.|..+.....+.++|+.++.+++.........|||+|++|++++
19559 T Consensus 11 ~~~~C~~~~~~V~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~CC~P~~~~~l~ 90 (116)
19560 T 2R53_A 11 RLKACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLNAHMNATNHAIVQTLVHLMNPEYVPKPCCAPTKLNAIS 90 (116)
19561 T ss_dssp CSSBSEEECCEEEGGGTTCTTTEEECSEEECCEEECBCCSSCCTTTTSCHHHHHHHHHHHHCTTTSCCCCEEEEEEEEEE
19562 T ss_pred ccCceEEEEEEEeHHHhCCCCcEecCCeEEeEEeceeCCCCCccccCCChHHHHHHHHHhcCCccCCCCeeeeeecCCeE
19563 Confidence 36799999999999999998799999999999999999998654323456777666554433345789999999999999
19564
19565
19566 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19567 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19568 |+|+++++.+++++++||+|++|||.
19569 T Consensus 91 il~~~~~~~~~~~~l~~~~v~~C~C~ 116 (116)
19570 T 2R53_A 91 VLYFDDNSNVILKKYRNMVVRACGCH 116 (116)
19571 T ss_dssp EEEECTTCCEEEEEEEEEEEEEEEEC
19572 T ss_pred EEEECCCCcEEEEEEcCeEEecccCC
19573 Confidence 99999877788899999999999995
19574
19575
19576 No 15
19577 >2R53_B Bone morphogenetic protein 6; BMP6, Vgr, TGF-beta ligand, Chondrogenesis; HET: MPD; 2.1A {Homo sapiens}
19578 Probab=99.83 E-value=9.9e-26 Score=192.30 Aligned_cols=106 Identities=49% Similarity=1.068 Sum_probs=89.6 Template_Neff=8.200
19579
19580 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19581 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19582 ....||+++++|+|+||||++|||+|++|+++||.|.|..+.....+.++|+.++.+++.........|||+|++|++++
19583 T Consensus 11 ~~~~C~~~~~~V~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~CC~P~~~~~l~ 90 (116)
19584 T 2R53_B 11 RLKACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLNAHMNATNHAIVQTLVHLMNPEYVPKPCCAPTKLNAIS 90 (116)
19585 T ss_dssp CSSBSEEECCEEEHHHHTCTTTEEECSEEECCEEESBCCSSCCGGGCCCHHHHHHHHHHHHCTTTSCCCCEEEEEEEEEE
19586 T ss_pred ccCceEEEEEEEeHHHhCCCCcEecCCeEEeEEeceeCCCCCccccCCChHHHHHHHHHhcCCccCCCCeeeeeecCCeE
19587 Confidence 36799999999999999998799999999999999999998654323456777666554433345789999999999999
19588
19589
19590 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19591 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19592 |+|+++++.+++++++||+|++|||.
19593 T Consensus 91 il~~~~~~~~~~~~l~~~~v~~C~C~ 116 (116)
19594 T 2R53_B 91 VLYFDDNSNVILKKYRNMVVRACGCH 116 (116)
19595 T ss_dssp EEEECTTSCEEEEEEEEEEEEEEEEC
19596 T ss_pred EEEECCCCcEEEEEEcCeEEecccCC
19597 Confidence 99999877788899999999999995
19598
19599
19600 No 16
19601 >1REU_A bone morphogenetic protein 2; TGF-beta fold, HORMONE-GROWTH FACTOR COMPLEX; HET: MPD; 2.65A {Homo sapiens} SCOP: g.17.1.2
19602 Probab=99.83 E-value=1.1e-25 Score=187.67 Aligned_cols=102 Identities=56% Similarity=1.151 Sum_probs=87.5 Template_Neff=8.600
19603
19604 Q NP_000548.2 399 RCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILF 478 (501)
19605 Q Consensus 399 ~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ily 478 (501)
19606 .||+++++|+|+||||++|||+|++|+++||.|.|..+.....+.++|+.++.+++... ...+.|||+|++|++++|||
19607 T Consensus 2 ~C~~~~~~V~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~cC~P~~~~~l~ily 80 (103)
19608 T 1REU_A 2 SCKRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPPADHLNSTNHAIVQTLVNSVN-SKIPKACCVPTELSAISMLY 80 (103)
19609 T ss_dssp BSEEECCEEETTTTTCTTTCCBCSEEECCEEECBCCSSCCSSSCBCHHHHHHHHHHHHC-SSSCCCCEEEEEEEEEEEEE
19610 T ss_pred CceEEEeEecHHHcCCCCcEeCCCeecceEEeeeCCCCCcccCCCChhHHHHHHHhhcC-CCCCCccceeeEeCceEEEE
19611 Confidence 69999999999999998899999999999999999998754333456777776654332 35689999999999999999
19612
19613
19614 Q NP_000548.2 479 IDSANNVVYKQYEDMVVESCGCR 501 (501)
19615 Q Consensus 479 ~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19616 ++++++++++.++||+|++|||+
19617 T Consensus 81 ~~~~~~~~~~~~~~~~v~~CgC~ 103 (103)
19618 T 1REU_A 81 LDENEKVVLKNYQDMVVEGCGCR 103 (103)
19619 T ss_dssp ECTTCCEEEEEEEEEEEEEEEEC
19620 T ss_pred EcCCCcEEEEEeCCeEEeccccC
19621 Confidence 99877788999999999999995
19622
19623
19624 No 17
19625 >1M4U_L Bone Morphogenetic Protein-7/Noggin; NOGGIN, BMP ANTAGONIST, BMP-7, BONE; HET: NAG; 2.42A {Homo sapiens} SCOP: g.17.1.2
19626 Probab=99.82 E-value=1.2e-25 Score=197.81 Aligned_cols=111 Identities=48% Similarity=1.063 Sum_probs=88.2 Template_Neff=7.500
19627
19628 Q NP_000548.2 391 RPSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTR 470 (501)
19629 Q Consensus 391 ~~~~~~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~ 470 (501)
19630 +........||+++++|+|++|||++|||+|++|+++||.|.|..+.....+.++|++++.+++...+.....|||+|++
19631 T Consensus 29 ~~~~~~~~~C~~~~~~V~f~~igw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~t~h~~l~~l~~~~~~~~~~~pCC~P~~ 108 (139)
19632 T 1M4U_L 29 NSSSDQRQACKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMNATNHAIVQTLVHFINPETVPKPCCAPTQ 108 (139)
19633 T ss_dssp ---------SEEECCEEESGGGTCTTTEEECSEEECCEEECBCCSSEEGGGCCCHHHHHHHHHHHHCTTSSCCCCEEEEE
19634 T ss_pred ccCCCCCCcccceecccCHHHhCCCCceecCCeecceeecccCCCCCccccCCCHHHHHHHHHHhcCCCCCCCCceeeee
19635 Confidence 33445678999999999999999988999999999999999999887533234577777776654434467899999999
19636
19637
19638 Q NP_000548.2 471 LSPISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19639 Q Consensus 471 ~~~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19640 |++++|||+++++.++++.++||+|++|||+
19641 T Consensus 109 ~~~l~ily~d~~~~i~~~~l~~mvv~~CgC~ 139 (139)
19642 T 1M4U_L 109 LNAISVLYFDDSSNVILKKYRNMVVRACGCH 139 (139)
19643 T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEEEEEES
19644 T ss_pred cCCeEEEEECCCCCEEEEEECCeEEeccccC
19645 Confidence 9999999999877788999999999999995
19646
19647
19648 No 18
19649 >2H62_B Bone morphogenetic protein 2, Bone; TGF-beta superfamily, ligand-receptor complex, HORMONE-GROWTH; 1.85A {Homo sapiens} SCOP: g.17.1.2
19650 Probab=99.82 E-value=2.1e-25 Score=189.59 Aligned_cols=105 Identities=57% Similarity=1.165 Sum_probs=88.7 Template_Neff=8.300
19651
19652 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19653 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19654 ....||+++++|+|++|||++|||+|++|+++||.|.|..+.....+.++|+.++.+++... .....|||+|++|++++
19655 T Consensus 10 ~~~~C~~~~~~V~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~t~h~~~~~~~~~~~-~~~~~~CC~P~~~~~l~ 88 (114)
19656 T 2H62_B 10 LKSSCKRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVN-SKIPKACCVPTELSAIS 88 (114)
19657 T ss_dssp --CBSEEECCEEEGGGTTCTTTEEECSEEECCEEECBCCSSCCGGGCCCHHHHHHHHHHHHC-TTSCCCCEEEEEEEEEE
19658 T ss_pred ccCcceEEEEEEehHHcCCCCcEeCCCeeeceEEeeeCCCCCccccCCCchHHHHHHHHhcC-CCCCCccceeeEeCceE
19659 Confidence 46789999999999999998899999999999999999988754333456777776654332 35689999999999999
19660
19661
19662 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19663 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19664 |+|+|++++++++.++||+|++|+|+
19665 T Consensus 89 ily~~~~~~~~~~~~~~~~v~~C~C~ 114 (114)
19666 T 2H62_B 89 MLYLDENEKVVLKNYQDMVVEGCGCR 114 (114)
19667 T ss_dssp EEEEETTTEEEEEEEEEEEEEEEEEC
19668 T ss_pred EEEECCCCcEEEEEeCCeEEeccccC
19669 Confidence 99999877788999999999999995
19670
19671
19672 No 19
19673 >6Q2J_B Growth/differentiation factor 15, GDNF family; RET, receptor tyrosine kinase, cryo-EM; HET: NAG; 4.1A {Homo sapiens}
19674 Probab=99.81 E-value=3.8e-25 Score=193.68 Aligned_cols=102 Identities=27% Similarity=0.754 Sum_probs=85.9 Template_Neff=7.400
19675
19676 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19677 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19678 ....|++++++|+|+||||++|||+|++|+++||.|.|..+... .++|+.++.+++...+..+..|||+|++|++++
19679 T Consensus 34 ~~~cC~~~~~~V~F~dlGw~~wIi~P~~~~~~~C~G~C~~~~~~---~t~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 110 (135)
19680 T 6Q2J_B 34 PGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGACPSQFRA---ANMHAQIKTSLHRLKPDTVPAPCCVPASYNPMV 110 (135)
19681 T ss_pred CcCcceeEEEEEeHHHcCCCCcEECCCeEEeEEecccCCCCCCC---CChHHHHHHHHHhcCCCCCCCCceeeeeecceE
19682 Confidence 34445458999999999997799999999999999999988753 346777777665444456789999999999999
19683
19684
19685 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19686 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19687 |+|++++ .++++.++||+|++|||+
19688 T Consensus 111 ily~~~~-~i~~~~l~dmvv~~CgC~ 135 (135)
19689 T 6Q2J_B 111 LIQKTDT-GVSLQTYDDLLAKDCHCI 135 (135)
19690 T ss_pred EEEECCC-eEEEEEECCeEEeccccC
19691 Confidence 9998874 788899999999999995
19692
19693
19694 No 20
19695 >1KTZ_A TRANSFORMING GROWTH FACTOR BETA 3/TGF-beta; CYTOKINE-RECEPTOR COMPLEX, CYTOKINE-CYTOKINE RECEPTOR COMPLEX; 2.15A {Homo sapiens} SCOP: g.17.1.2
19696 Probab=99.80 E-value=7.5e-25 Score=185.60 Aligned_cols=102 Identities=35% Similarity=0.837 Sum_probs=76.2 Template_Neff=8.200
19697
19698 Q NP_000548.2 395 NLKARCSRKALHVNFK-DMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSP 473 (501)
19699 Q Consensus 395 ~~~~~Cc~~~l~V~F~-dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~ 473 (501)
19700 .....||+++++|+|+ +|||+ |||+|++|+++||.|.|..+... .++|+.++.+++...+...+.|||+|++|++
19701 T Consensus 10 ~~~~~Cc~~~~~V~f~~~lgw~-~Ii~P~~~~~~~C~G~C~~~~~~---~~~h~~~~~~~~~~~~~~~~~~CC~P~~~~~ 85 (112)
19702 T 1KTZ_A 10 NLEENCCVRPLYIDFRQDLGWK-WVHEPKGYYANFCSGPCPYLRSA---DTTHSTVLGLYNTLNPEASASPCCVPQDLEP 85 (112)
19703 T ss_dssp ---CCCEEECCEEECCCCCCCC-CEEECSEEECCEEECCCCSSCCC---------------------CCCCCEEECCEEE
19704 T ss_pred cccCCcEEEEEEEECchhcCCC-eeeCCCeeeeeeeeecCCCCCCC---CCChHHHHHHHHhcCcccCCCCcccceecCc
19705 Confidence 3478999999999999 99998 99999999999999999998753 3578877776654444567899999999999
19706
19707
19708 Q NP_000548.2 474 ISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19709 Q Consensus 474 l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19710 ++|||++++ .++++.++||+|++|||+
19711 T Consensus 86 l~ily~~~~-~~~~~~~~~miv~~CgC~ 112 (112)
19712 T 1KTZ_A 86 LTILYYVGR-TPKVEQLSNMVVKSCKCS 112 (112)
19713 T ss_dssp EEEEEEETT-EEEEEEEEEEEECCEEEC
19714 T ss_pred eEEEEEeCC-eeEEEEecCeEEeeCcCC
19715 Confidence 999999987 577899999999999995
19716
19717
19718 No 21
19719 >5TY4_B TGF-beta receptor type-2 (E.C. 2.7.11.30); TRANSFERASE; 2.9A {Homo sapiens}
19720 Probab=99.80 E-value=9.9e-25 Score=179.89 Aligned_cols=96 Identities=34% Similarity=0.853 Sum_probs=84.4 Template_Neff=8.500
19721
19722 Q NP_000548.2 400 CSRKALHVNFK-DMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILF 478 (501)
19723 Q Consensus 400 Cc~~~l~V~F~-dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ily 478 (501)
19724 ||+++++|+|+ ++||+ |||+|++|+++||.|.|..+... .++|+.++.+++...+.....|||+|++|++++|+|
19725 T Consensus 1 Cc~~~~~v~f~~~lgw~-~Ii~P~~~~~~~C~G~C~~~~~~---~~~h~~i~~~~~~~~~~~~~~~CC~P~~~~~l~il~ 76 (97)
19726 T 5TY4_B 1 CCLRPLYIDFRKDLGWK-WIHEPKGYNANFCAGACPYLWSS---DTQHSRVLSLYNTINPEASASPCCVSQDLEPLTIVY 76 (97)
19727 T ss_pred CeEEEEEEECccccCCC-ceeCCCcccCeeeceeCCCCCCC---CccHHHHHHHHHhcCcccCCCCceeceeccceeEEE
19728 Confidence 89999999997 99998 99999999999999999988653 457888777765444445789999999999999999
19729
19730
19731 Q NP_000548.2 479 IDSANNVVYKQYEDMVVESCGC 500 (501)
19732 Q Consensus 479 ~d~~~~~~~~~~~~mvv~~CgC 500 (501)
19733 ++++ +++++.++||+|++|||
19734 T Consensus 77 ~~~~-~~~~~~~~~m~v~~CgC 97 (97)
19735 T 5TY4_B 77 YVGR-KPKVEQLSNMIVKSCKC 97 (97)
19736 T ss_pred EeCC-ceEEEEecCeEEeeCCC
19737 Confidence 9987 57889999999999999
19738
19739
19740 No 22
19741 >5VT2_B Growth/differentiation factor 15; TGF-beta family, SIGNALING PROTEIN; HET: EDO; 2.3A {Homo sapiens}
19742 Probab=99.80 E-value=1.1e-24 Score=184.58 Aligned_cols=102 Identities=27% Similarity=0.753 Sum_probs=87.2 Template_Neff=8.300
19743
19744 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19745 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19746 ....|++++++|+|+||||++|||+|++|+++||.|.|..+... .++|+.++.+++...+.....|||+|++|++++
19747 T Consensus 11 ~~~~C~~~~~~V~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~---~~~h~~i~~~~~~~~~~~~~~~CC~P~~~~~l~ 87 (112)
19748 T 5VT2_B 11 PGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGACPSQFRA---ANMHAQIKTSLHRLKPDTVPAPCCVPASYNPMV 87 (112)
19749 T ss_dssp TTCBSEEEEEEEEHHHHTCTTTEEECSEEEEEEEESBCCTTSSB---CSHHHHHHHHHHHHCTTTSCCCCEEEEEEEEEE
19750 T ss_pred CCCcceEEEEEEeHHHhCCCccEECCCeeeceeeeeeCCCCCCc---ccchHHHHHHHHhcCCCCCCCCceecceecceE
19751 Confidence 34455569999999999998899999999999999999998753 457888877765544556789999999999999
19752
19753
19754 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19755 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19756 |+|+++ +.+++++++||+|++|||.
19757 T Consensus 88 il~~~~-~~~~~~~~~~m~v~~C~C~ 112 (112)
19758 T 5VT2_B 88 LIQKTD-TGVSLQTYDDLLAKDCHCI 112 (112)
19759 T ss_dssp EEEECS-SSEEEEEEEEEEEEEEEEC
19760 T ss_pred EEEEcC-CeEEEEEeCCeEEecCCcC
19761 Confidence 999887 4788999999999999995
19762
19763
19764 No 23
19765 >5VZ3_A Growth/differentiation factor 15; Growth Factor, SIGNALING PROTEIN; 1.97A {Homo sapiens}
19766 Probab=99.80 E-value=1.1e-24 Score=184.58 Aligned_cols=102 Identities=27% Similarity=0.753 Sum_probs=87.2 Template_Neff=8.300
19767
19768 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19769 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19770 ....|++++++|+|+||||++|||+|++|+++||.|.|..+... .++|+.++.+++...+.....|||+|++|++++
19771 T Consensus 11 ~~~~C~~~~~~V~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~---~~~h~~i~~~~~~~~~~~~~~~CC~P~~~~~l~ 87 (112)
19772 T 5VZ3_A 11 PGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGACPSQFRA---ANMHAQIKTSLHRLKPDTVPAPCCVPASYNPMV 87 (112)
19773 T ss_dssp SSSBSEEEEEEEEHHHHTCTTTEEECSEEEEEEEESBCCTTSSB---CSHHHHHHHHHHHHCTTTSCCCCEEEEEEEEEE
19774 T ss_pred CCCcceEEEEEEeHHHhCCCccEECCCeeeceeeeeeCCCCCCc---ccchHHHHHHHHhcCCCCCCCCceecceecceE
19775 Confidence 34455569999999999998899999999999999999998753 457888877765544556789999999999999
19776
19777
19778 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19779 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19780 |+|+++ +.+++++++||+|++|||.
19781 T Consensus 88 il~~~~-~~~~~~~~~~m~v~~C~C~ 112 (112)
19782 T 5VZ3_A 88 LIQKTD-TGVSLQTYDDLLAKDCHCI 112 (112)
19783 T ss_dssp EEEECS-SSEEEEEEEEEEEEEEEEC
19784 T ss_pred EEEEcC-CeEEEEEeCCeEEecCCcC
19785 Confidence 999887 4788999999999999995
19786
19787
19788 No 24
19789 >2ARP_A Inhibin beta A chain, Follistatin; cystine knot, disulfide rich, egf; HET: GOL, 1PG; 2.0A {Homo sapiens} SCOP: g.17.1.2
19790 Probab=99.79 E-value=1.3e-24 Score=184.92 Aligned_cols=105 Identities=38% Similarity=0.831 Sum_probs=81.5 Template_Neff=8.700
19791
19792 Q NP_000548.2 397 KARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHL--EPTNHAVIQTLMNS--MDPESTPPTCCVPTRLS 472 (501)
19793 Q Consensus 397 ~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~--~~~~h~~i~~~~~~--~~~~~~~~pCC~P~~~~ 472 (501)
19794 ...||++.++|+|++|||++|||+|++|+++||.|.|..+..... ..++|+.++.++.. ..+.....|||+|++|+
19795 T Consensus 8 ~~~C~~~~~~v~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~CC~P~~~~ 87 (116)
19796 T 2ARP_A 8 VNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPTKLR 87 (116)
19797 T ss_dssp -CCSEEECCEEEHHHHTCTTTEEECSEEECCEEESCCCC-CCHHH----H----HHHHTTSTTCSSCCCCCCCEEEEEEE
19798 T ss_pred cccceeEEEEEeHHHcCCccceeCCCceeCceeeeeCCCCcCcCCCCCcchHHHHHHHHHhhCCCCCcCCCCcccccccC
19799 Confidence 678999999999999999889999999999999999998865321 12456655554321 12335679999999999
19800
19801
19802 Q NP_000548.2 473 PISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19803 Q Consensus 473 ~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19804 +++|+|++++++++++.++||+|++|||+
19805 T Consensus 88 ~l~il~~~~~~~~~~~~~~~m~v~~CgC~ 116 (116)
19806 T 2ARP_A 88 PMSMLYYDDGQNIIKKDIQNMIVEECGCS 116 (116)
19807 T ss_dssp EEEEEEEC-TTCEEEEEEEEEEEEEEEEC
19808 T ss_pred ceEEEEEcCCCcEEEEEeCCeEEeecccC
19809 Confidence 99999999877788999999999999995
19810
19811
19812 No 25
19813 >2ARV_A Inhibin beta A chain; homodimer, cystine knot, disulfide linked; HET: 1PG, SO4, GOL; 2.0A {Homo sapiens} SCOP: g.17.1.2
19814 Probab=99.79 E-value=1.3e-24 Score=184.92 Aligned_cols=105 Identities=38% Similarity=0.831 Sum_probs=86.7 Template_Neff=8.700
19815
19816 Q NP_000548.2 397 KARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHL--EPTNHAVIQTLMNS--MDPESTPPTCCVPTRLS 472 (501)
19817 Q Consensus 397 ~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~--~~~~h~~i~~~~~~--~~~~~~~~pCC~P~~~~ 472 (501)
19818 ...||++.++|+|++|||++|||+|++|+++||.|.|+.+..... +.++|+.++.++.. ..+.....|||+|++|+
19819 T Consensus 8 ~~~C~~~~~~v~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~CC~P~~~~ 87 (116)
19820 T 2ARV_A 8 VNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPTKLR 87 (116)
19821 T ss_dssp CCBSEEECCEEETTTTTCTTTEEECSEEECCEEESBCCGGGTTEETTEECHHHHHHHHHHHTTCTTTTTSCCCEEEEEEE
19822 T ss_pred cccceeEEEEEeHHHcCCccceeCCCeEeCeeeEEECCCCCCCCCCCCcchHHHHHHHHHhcCCCCccCCCCccccceec
19823 Confidence 678999999999999999889999999999999999998865321 12456655554321 12335679999999999
19824
19825
19826 Q NP_000548.2 473 PISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19827 Q Consensus 473 ~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19828 +++|||++++++++++.++||+|++|||+
19829 T Consensus 88 ~l~il~~~~~~~~~~~~~~~m~v~~CgC~ 116 (116)
19830 T 2ARV_A 88 PMSMLYYDDGQNIIKKDIQNMIVEECGCS 116 (116)
19831 T ss_dssp EEEEEEEETTTEEEEEEEEEEEEEEEEEC
19832 T ss_pred cEEEEEEeCCCeEEEEEeCCeEEeeccCC
19833 Confidence 99999999877788999999999999995
19834
19835
19836 No 26
19837 >2P6A_B Activin A, Follistatin 315; Follistatin, Activin,Inhibin, TGF-beta, SIGNALING PROTEIN; 3.4A {Homo sapiens} SCOP: g.17.1.2
19838 Probab=99.79 E-value=1.3e-24 Score=184.92 Aligned_cols=105 Identities=38% Similarity=0.831 Sum_probs=86.7 Template_Neff=8.700
19839
19840 Q NP_000548.2 397 KARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHL--EPTNHAVIQTLMNS--MDPESTPPTCCVPTRLS 472 (501)
19841 Q Consensus 397 ~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~--~~~~h~~i~~~~~~--~~~~~~~~pCC~P~~~~ 472 (501)
19842 ...||++.++|+|++|||++|||+|++|+++||.|.|+.+..... +.++|+.++.++.. ..+.....|||+|++|+
19843 T Consensus 8 ~~~C~~~~~~v~f~~lgw~~~Ii~P~~~~~~~C~G~C~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~CC~P~~~~ 87 (116)
19844 T 2P6A_B 8 VNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSCCVPTKLR 87 (116)
19845 T ss_pred cccceeEEEEEeHHHcCCccceeCCCeEeCeeeEEECCCCCCCCCCCCcchHHHHHHHHHhcCCCCccCCCCccccceec
19846 Confidence 678999999999999999889999999999999999998865321 12456655554321 12335679999999999
19847
19848
19849 Q NP_000548.2 473 PISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19850 Q Consensus 473 ~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19851 +++|||++++++++++.++||+|++|||+
19852 T Consensus 88 ~l~il~~~~~~~~~~~~~~~m~v~~CgC~ 116 (116)
19853 T 2P6A_B 88 PMSMLYYDDGQNIIKKDIQNMIVEECGCS 116 (116)
19854 T ss_pred cEEEEEEeCCCeEEEEEeCCeEEeeccCC
19855 Confidence 99999999877788999999999999995
19856
19857
19858 No 27
19859 >2TGI_A TRANSFORMING GROWTH FACTOR-BETA TWO (TGF-B2); GROWTH FACTOR; 1.8A {Homo sapiens} SCOP: g.17.1.2
19860 Probab=99.79 E-value=1.5e-24 Score=183.69 Aligned_cols=101 Identities=35% Similarity=0.828 Sum_probs=88.1 Template_Neff=8.200
19861
19862 Q NP_000548.2 396 LKARCSRKALHVNFK-DMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPI 474 (501)
19863 Q Consensus 396 ~~~~Cc~~~l~V~F~-dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l 474 (501)
19864 ....||+++++|+|+ +|||+ |||+|++|+++||.|.|..+... .++|+.++.+++...+.....|||+|++|+++
19865 T Consensus 11 ~~~~Cc~~~~~V~f~~~lgw~-~Ii~P~~~~~~~C~G~C~~~~~~---~~~h~~~~~~~~~~~~~~~~~~CC~P~~~~~l 86 (112)
19866 T 2TGI_A 11 VQDNCCLRPLYIDFKRDLGWK-WIHEPKGYNANFCAGACPYLWSS---DTQHSRVLSLYNTINPEASASPCCVSQDLEPL 86 (112)
19867 T ss_dssp CCSBSEEECCEEECCCCCCCT-TEEECSEEECCEEECBCCTTSSB---CSHHHHHHHHHHHHCGGGCCCCCEEECSEEEE
19868 T ss_pred CCCCcEEEEEEEECchhhCCc-eeeCCCeEeceeecccCCCCCCC---cccHHHHHHHHHhcCcccCCCCceeceeecce
19869 Confidence 478999999999999 99998 99999999999999999988653 34677777766544444678999999999999
19870
19871
19872 Q NP_000548.2 475 SILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19873 Q Consensus 475 ~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19874 +|||++++ +++++.++||+|++|||+
19875 T Consensus 87 ~il~~~~~-~~~~~~~~~m~v~~CgC~ 112 (112)
19876 T 2TGI_A 87 TILYYIGK-TPKIEQLSNMIVKSCKCS 112 (112)
19877 T ss_dssp EEEEEETT-EEEEEEEEEEEECCEEEC
19878 T ss_pred EEEEEeCC-ceEEEEeCCeEEEeCCCC
19879 Confidence 99999986 578899999999999995
19880
19881
19882 No 28
19883 >3HH2_B Growth/differentiation factor 8, Follistatin; protein-protein complex, TB domain, cystine; HET: PO4, CIT; 2.15A {Mus musculus}
19884 Probab=99.79 E-value=2.4e-24 Score=181.50 Aligned_cols=99 Identities=39% Similarity=0.949 Sum_probs=82.7 Template_Neff=8.200
19885
19886 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19887 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19888 ....||+++++|+|++|||+ |||+|++|+++||.|.|..+.... .+|+. +++...+.....|||+|++|++++
19889 T Consensus 11 ~~~~C~~~~~~V~f~~lgw~-~Ii~P~~~~~~~C~G~C~~~~~~~---~~~~~---l~~~~~~~~~~~~CC~P~~~~~l~ 83 (109)
19890 T 3HH2_B 11 TESRCCRYPLTVDFEAFGWD-WIIAPKRYKANYCSGECEFVFLQK---YPHTH---LVHQANPRGSAGPCCTPTKMSPIN 83 (109)
19891 T ss_dssp CCCBSEEECCEEEHHHHTCT-TEEECSEEECCEEECBCCTTTTBC---CHHHH---HHHHHCCTTCCCCCEEEEEEEEEE
19892 T ss_pred CCCceeeeEEEEehHHhCCc-eEECCCeeeceEeceeCCCccccc---CCcce---ehhhcCCCCCCCCCccceeeCCeE
19893 Confidence 46799999999999999998 999999999999999999987542 13332 222222235689999999999999
19894
19895
19896 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19897 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19898 |+|++++++++++.++||+|++|||+
19899 T Consensus 84 il~~~~~~~~~~~~~~~m~v~~CgC~ 109 (109)
19900 T 3HH2_B 84 MLYFNGKEQIIYGKIPAMVVDRCGCS 109 (109)
19901 T ss_dssp EEEECTTCCEEEEEEEEEEEEEEEEC
19902 T ss_pred EEEEcCCCeEEEEEeCCeEEecccCC
19903 Confidence 99999877788999999999999995
19904
19905
19906 No 29
19907 >5F3B_C RK35 Chimeric antibody heavy chain; myostatin, antibody, complex, Signaling Protein-Immune; HET: GOL; 1.76A {Mus musculus}
19908 Probab=99.79 E-value=2.4e-24 Score=181.50 Aligned_cols=99 Identities=39% Similarity=0.949 Sum_probs=82.7 Template_Neff=8.200
19909
19910 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19911 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19912 ....||+++++|+|++|||+ |||+|++|+++||.|.|..+.... .+|+. +++...+.....|||+|++|++++
19913 T Consensus 11 ~~~~C~~~~~~V~f~~lgw~-~Ii~P~~~~~~~C~G~C~~~~~~~---~~~~~---l~~~~~~~~~~~~CC~P~~~~~l~ 83 (109)
19914 T 5F3B_C 11 TESRCCRYPLTVDFEAFGWD-WIIAPKRYKANYCSGECEFVFLQK---YPHTH---LVHQANPRGSAGPCCTPTKMSPIN 83 (109)
19915 T ss_pred CCCceeeeEEEEehHHhCCc-eEECCCeeeceEeceeCCCccccc---CCcce---ehhhcCCCCCCCCCccceeeCCeE
19916 Confidence 46799999999999999998 999999999999999999987542 13332 222222235689999999999999
19917
19918
19919 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19920 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19921 |+|++++++++++.++||+|++|||+
19922 T Consensus 84 il~~~~~~~~~~~~~~~m~v~~CgC~ 109 (109)
19923 T 5F3B_C 84 MLYFNGKEQIIYGKIPAMVVDRCGCS 109 (109)
19924 T ss_pred EEEEcCCCeEEEEEeCCeEEecccCC
19925 Confidence 99999877788999999999999995
19926
19927
19928 No 30
19929 >3KFD_D Transforming growth factor beta-1, TGF-beta; TGF-beta, TGF-b1, TGF-beta receptor type-1; 2.995A {Homo sapiens}
19930 Probab=99.78 E-value=3.7e-24 Score=181.25 Aligned_cols=102 Identities=30% Similarity=0.731 Sum_probs=87.9 Template_Neff=8.300
19931
19932 Q NP_000548.2 395 NLKARCSRKALHVNFK-DMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSP 473 (501)
19933 Q Consensus 395 ~~~~~Cc~~~l~V~F~-dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~ 473 (501)
19934 .....||+++++|+|+ +|||+ |||+|++|+++||.|.|..+... .++|+.++.+++...+..+..|||+|++|++
19935 T Consensus 10 ~~~~~C~~~~~~v~f~~~lg~~-~Ii~P~~~~~~~C~G~C~~~~~~---~~~~~~~~~~~~~~~~~~~~~~CC~P~~~~~ 85 (112)
19936 T 3KFD_D 10 STEKNCCVRQLYIDFRKDLGWK-WIHEPKGYHANFCLGPCPYIWSL---DTQYSKVLALYNQHNPGASAAPCCVPQALEP 85 (112)
19937 T ss_pred CCCCCcEEEEEEEECccccCCc-eeeCCCeEEeeeeceeCCCCCCC---cccHHHHHHHHHhhCCCCCCCCccccccccc
19938 Confidence 3477899999999998 99998 99999999999999999988653 3467777766654444467899999999999
19939
19940
19941 Q NP_000548.2 474 ISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19942 Q Consensus 474 l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19943 ++|+|++++ +++++.++||+|++|||+
19944 T Consensus 86 l~ily~~~~-~~~~~~~~~m~v~~CgC~ 112 (112)
19945 T 3KFD_D 86 LPIVYYVGR-KPKVEQLSNMIVRSCKCS 112 (112)
19946 T ss_pred eeEEEEeCC-eEEEEEeCCeEEEecCCC
19947 Confidence 999999987 577899999999999995
19948
19949
19950 No 31
19951 >5E4G_A Growth/differentiation factor 11; Bone morphogenetic protein 11, BMP-11; HET: PG4; 1.5A {Homo sapiens}
19952 Probab=99.76 E-value=1.2e-23 Score=177.01 Aligned_cols=99 Identities=37% Similarity=0.939 Sum_probs=83.0 Template_Neff=8.400
19953
19954 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPIS 475 (501)
19955 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ 475 (501)
19956 ....||+++++|+|+||||+ |||+|++|+++||.|+|..+.... .+|+.+ +....+..++.|||+|++|++++
19957 T Consensus 11 ~~~~C~~~~~~V~f~~lgw~-~Ii~P~~~~~~~C~G~C~~~~~~~---~~~~~l---~~~~~~~~~~~~cC~P~~~~~l~ 83 (109)
19958 T 5E4G_A 11 SESRCCRYPLTVDFEAFGWD-WIIAPKRYKANYCSGQCEYMFMQK---YPHTHL---VQQANPRGSAGPCCTPTKMSPIN 83 (109)
19959 T ss_dssp CCCBSEEECCEEETTTTTCT-TEEECSEEECCEEECBCCTTTTCS---STHHHH---HHHHCCTTCCCCCEEEEEEEEEE
19960 T ss_pred CcCceEeEEEEEehHHcCCc-eEeCCCeeeceeecccCCcccccc---CCchHH---HHhcCCCCCCCCCccceeeccEE
19961 Confidence 47799999999999999998 999999999999999999987532 133322 11122345789999999999999
19962
19963
19964 Q NP_000548.2 476 ILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19965 Q Consensus 476 ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19966 |+|++++++++++.++||+|++|||+
19967 T Consensus 84 il~~~~~~~~~~~~~~d~~v~~C~C~ 109 (109)
19968 T 5E4G_A 84 MLYFNDKQQIIYGKIPGMVVDRCGCS 109 (109)
19969 T ss_dssp EEEECSSSCEEEEEEEEEEEEEEEEC
19970 T ss_pred EEEEcCCCeEEEEEeCCeEEeeccCC
19971 Confidence 99999887888999999999999995
19972
19973
19974 No 32
19975 >5NMZ_B Neurturin; cystine knot, neurotrophic factor, GFL; HET: GOL; 1.6A {Homo sapiens}
19976 Probab=99.71 E-value=2.2e-22 Score=166.98 Aligned_cols=93 Identities=22% Similarity=0.465 Sum_probs=76.9 Template_Neff=8.300
19977
19978 Q NP_000548.2 397 KARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNH-AVIQTLMNSMD---PESTPPTCCVPTRLS 472 (501)
19979 Q Consensus 397 ~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h-~~i~~~~~~~~---~~~~~~pCC~P~~~~ 472 (501)
19980 ...||+++++|+|+||||+ | |+|++|+++||.|.|..+.. +| +.++.+++... +.....|||+|++|+
19981 T Consensus 4 ~~~C~~~~~~v~f~dlgw~-~-i~P~~~~~~~C~G~C~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~CC~P~~~~ 75 (101)
19982 T 5NMZ_B 4 ARPCGLRELEVRVSELGLG-Y-ASDETVLFRYCAGACEAAAR------VYDLGLRRLRQRRRLRRERVRAQPCCRPTAYE 75 (101)
19983 T ss_dssp CCBSEEEEEEEEGGGGTSS-C-CCCCEEEEEEEECBCGGGCC------HHHHHHHHHHTTTCSTTCCBCCSCCEEEEEEC
19984 T ss_pred CCCccceEEEEeHHHcCCe-e-ecCCeEECeeeceeCCchhh------chHHHHHHHHHhhhhhccccCCCCceeeeeec
19985 Confidence 5689999999999999999 8 89999999999999999864 23 33444433322 246789999999999
19986
19987
19988 Q NP_000548.2 473 -PISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
19989 Q Consensus 473 -~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
19990 +++ |+|++ ++++.++||+|++|||+
19991 T Consensus 76 ~~l~--y~d~~--~~~~~~~~m~v~~CgC~ 101 (101)
19992 T 5NMZ_B 76 DEVS--FLDAH--SRYHTVHELSARECACV 101 (101)
19993 T ss_dssp SEEE--EECTT--CCEEEEESCSEEEEEEC
19994 T ss_pred CceE--eecCC--cEEEEeCCeeeecccCC
19995 Confidence 999 77764 78899999999999995
19996
19997
19998 No 33
19999 >5NMZ_C Neurturin; cystine knot, neurotrophic factor, GFL; HET: GOL; 1.6A {Homo sapiens}
20000 Probab=99.71 E-value=2.2e-22 Score=166.98 Aligned_cols=93 Identities=22% Similarity=0.465 Sum_probs=76.9 Template_Neff=8.300
20001
20002 Q NP_000548.2 397 KARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNH-AVIQTLMNSMD---PESTPPTCCVPTRLS 472 (501)
20003 Q Consensus 397 ~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h-~~i~~~~~~~~---~~~~~~pCC~P~~~~ 472 (501)
20004 ...||+++++|+|+||||+ | |+|++|+++||.|.|..+.. +| +.++.+++... +.....|||+|++|+
20005 T Consensus 4 ~~~C~~~~~~v~f~dlgw~-~-i~P~~~~~~~C~G~C~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~CC~P~~~~ 75 (101)
20006 T 5NMZ_C 4 ARPCGLRELEVRVSELGLG-Y-ASDETVLFRYCAGACEAAAR------VYDLGLRRLRQRRRLRRERVRAQPCCRPTAYE 75 (101)
20007 T ss_dssp CCBSEEEEEEEEGGGGTSS-S-CCCCEEEEEEEECBCCTTSC------HHHHHHHHHHHTTCSTTCCCCCSCCEEEEEEC
20008 T ss_pred CCCccceEEEEeHHHcCCe-e-ecCCeEECeeeceeCCchhh------chHHHHHHHHHhhhhhccccCCCCceeeeeec
20009 Confidence 5689999999999999999 8 89999999999999999864 23 33444433322 246789999999999
20010
20011
20012 Q NP_000548.2 473 -PISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20013 Q Consensus 473 -~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20014 +++ |+|++ ++++.++||+|++|||+
20015 T Consensus 76 ~~l~--y~d~~--~~~~~~~~m~v~~CgC~ 101 (101)
20016 T 5NMZ_C 76 DEVS--FLDAH--SRYHTVHELSARECACV 101 (101)
20017 T ss_dssp SCEE--EECTT--SCEEEESSCSEEEEEEC
20018 T ss_pred CceE--eecCC--cEEEEeCCeeeecccCC
20019 Confidence 999 77764 78899999999999995
20020
20021
20022 No 34
20023 >2GH0_C artemin, GDNF family receptor alpha-3; cystine-knot, helix bundle, HORMONE-GROWTH FACTOR; HET: BMA, NAG, MAN; 1.92A {Homo sapiens}
20024 Probab=99.71 E-value=2.9e-22 Score=166.00 Aligned_cols=95 Identities=19% Similarity=0.418 Sum_probs=77.9 Template_Neff=8.600
20025
20026 Q NP_000548.2 398 ARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMD----PESTPPTCCVPTRLSP 473 (501)
20027 Q Consensus 398 ~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~----~~~~~~pCC~P~~~~~ 473 (501)
20028 ..||+++++|+|+||||++||| ++|+++||.|.|+.+.... .+.|+.++.++ ... ....+.|||+|++|++
20029 T Consensus 2 ~~C~~~~~~V~f~dlgw~~~I~--~~~~~~~C~G~C~~~~~~~--~~~~~~l~~~~-~~~~~~~~~~~~~~CC~P~~~~~ 76 (101)
20030 T 2GH0_C 2 PGCRLRSQLVPVRALGLGHRSD--ELVRFRFCSGSCRRARSPH--DLSLASLLGAG-ALRPPPGSRPVSQPCCRPTRYEA 76 (101)
20031 T ss_pred CCCcceEEEEeHHHcCCCcccC--cEEecceeeeeCCCCCCCc--cchHHHHHHcc-cCCCCCCCCCCCCCceeeeeecc
20032 Confidence 4799999999999999988988 9999999999999987642 23455554443 111 1357899999999999
20033
20034
20035 Q NP_000548.2 474 ISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20036 Q Consensus 474 l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20037 ++|||+++ +++.++||+|++|||+
20038 T Consensus 77 l~il~~~~----~~~~~~~m~v~~CgC~ 100 (101)
20039 T 2GH0_C 77 VSFMDVNS----TWRTVDRLSATACGCL 100 (101)
20040 T ss_pred eEEEEeCC----eeEEEcceEeeccccc
20041 Confidence 99999875 5789999999999995
20042
20043
20044 No 35
20045 >5MR4_B Neurturin, GDNF family receptor alpha-2; Complex, Signalling, Receptor, signaling protein; 2.4A {Homo sapiens}
20046 Probab=99.70 E-value=4.4e-22 Score=165.39 Aligned_cols=94 Identities=21% Similarity=0.445 Sum_probs=76.5 Template_Neff=8.200
20047
20048 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNH-AVIQTLMNSMD---PESTPPTCCVPTRL 471 (501)
20049 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h-~~i~~~~~~~~---~~~~~~pCC~P~~~ 471 (501)
20050 ....||+++++|+|+||||+ | |+|++|+++||.|.|+.+.. +| +.++.++.... +.....|||+|++|
20051 T Consensus 4 ~~~~C~~~~~~v~f~dlgw~-~-i~P~~~~~~~C~G~C~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~CC~P~~~ 75 (102)
20052 T 5MR4_B 4 GARPCGLRELEVRVSELGLG-Y-ASDETVLFRYCAGACEAAAR------VYDLGLRRLRQRRRLRRERVRAQPCCRPTAY 75 (102)
20053 T ss_dssp -CCBSEEEEEEEEGGGGSSS-C-CCCCEEEEEEEESBCCSCCC------HHHHHHHHHHHTTCSTTCCCCCSCCEEEEEE
20054 T ss_pred CCCCceeeEEEEEHHHcCCc-e-eCCCeEECeeeceeCCchhc------chHHHHHHHHHhhhhhccccCCCCceeeeee
20055 Confidence 35789999999999999998 7 89999999999999999864 23 33333333222 24678999999999
20056
20057
20058 Q NP_000548.2 472 S-PISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20059 Q Consensus 472 ~-~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20060 + +++ |+|++ ++++.++||+|++|||+
20061 T Consensus 76 ~~~l~--y~d~~--~~~~~~~~m~v~~CgC~ 102 (102)
20062 T 5MR4_B 76 EDEVS--FLDAH--SRYHTVHELSARECACV 102 (102)
20063 T ss_dssp CCEEE--EECTT--SCEEEEESCSEEEEEEC
20064 T ss_pred cCceE--eecCC--cEEEEECCeeeccccCC
20065 Confidence 9 999 77764 78999999999999995
20066
20067
20068 No 36
20069 >2V5E_B GDNF FAMILY RECEPTOR ALPHA-1, GLIAL; RECEPTOR-GLYCOPROTEIN COMPLEX, CELL MEMBRANE, GROWTH; HET: NAG, EDO, SCR; 2.35A {RATTUS NORVEGICUS}
20070 Probab=99.69 E-value=7.4e-22 Score=163.65 Aligned_cols=93 Identities=24% Similarity=0.547 Sum_probs=77.2 Template_Neff=8.400
20071
20072 Q NP_000548.2 397 KARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNH-AVIQTLMNSMD--PESTPPTCCVPTRLS- 472 (501)
20073 Q Consensus 397 ~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h-~~i~~~~~~~~--~~~~~~pCC~P~~~~- 472 (501)
20074 ...||+++++|+|+||||+ | |+|++|+++||.|.|+.+.. +| +.++.+++... +..+..|||+|++|+
20075 T Consensus 5 ~~~C~~~~~~V~f~~lgw~-~-i~P~~~~~~~C~G~C~~~~~------~h~~~~~~l~~~~~~~~~~~~~~CC~P~~~~~ 76 (101)
20076 T 2V5E_B 5 NRGCVLTAIHLNVTDLGLG-Y-ETKEELIFRYCSGSCDAAET------TYDKILKNLSRNRRLVSDKVGQACCRPIAFDD 76 (101)
20077 T ss_dssp TTTCEEEEEEEEGGGGCSS-C-CCSCEEEEEEEESCCCSCCS------HHHHHHHHHHHTTSSSSSSTTCCCEEEEEECC
20078 T ss_pred CCcceeeEEEEEHHHcCCc-c-cCCCeEECceecEeCCCCCC------cHHHHHHHHHhccCCCcccCCCCeEEeeEecC
20079 Confidence 5689999999999999998 7 89999999999999999842 45 44554443321 345789999999999
20080
20081
20082 Q NP_000548.2 473 PISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20083 Q Consensus 473 ~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20084 +++ |+|++ ++++.++||+|++|||+
20085 T Consensus 77 ~l~--y~d~~--~~~~~~~~m~v~~CgC~ 101 (101)
20086 T 2V5E_B 77 DLS--FLDDN--LVYHILRKHSAKRCGCI 101 (101)
20087 T ss_dssp CEE--EECTT--SCEEEECSCSEEEEEEC
20088 T ss_pred ceE--EecCC--EEEEEecCcEecccccC
20089 Confidence 999 77775 57899999999999995
20090
20091
20092 No 37
20093 >2ASK_B artemin; Glial cell derived family ligand; HET: SO4; 1.55A {Homo sapiens}
20094 Probab=99.69 E-value=9.1e-22 Score=166.60 Aligned_cols=94 Identities=20% Similarity=0.467 Sum_probs=77.2 Template_Neff=8.000
20095
20096 Q NP_000548.2 396 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNH-AVIQTLMNSMD------PESTPPTCCVP 468 (501)
20097 Q Consensus 396 ~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h-~~i~~~~~~~~------~~~~~~pCC~P 468 (501)
20098 ....||+++++|+|+||||+ | |+|++|+++||.|.|..+. ++| +.++.+++... ......|||+|
20099 T Consensus 12 ~~~~Cc~~~~~V~F~dlgw~-~-i~P~~~~~~~C~G~C~~~~------~~h~~~~~~l~~~~~~~~~~~~~~~~~~CC~P 83 (113)
20100 T 2ASK_B 12 GARGCRLRSQLVPVRALGLG-H-RSDELVRFRFCSGSCRRAR------SPHDLSLASLLGAGALRPPPGSRPVSQPCCRP 83 (113)
20101 T ss_dssp -CCBSEEEEEEEEGGGGSSS-C-CBSSEEEEEEEECBCGGGC------CHHHHHHHHHHHTTCSCCCSSSCCCCSCEEEE
20102 T ss_pred CCCCceeEEEEEEHHHcCCC-c-cCCCeEECceEeeeCCCCC------CCcHHHHHHHHHccCCCCCCCCCCCCCCceee
20103 Confidence 46799999999999999998 6 7999999999999999983 245 45555554332 23578999999
20104
20105
20106 Q NP_000548.2 469 TRLSPISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20107 Q Consensus 469 ~~~~~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20108 ++|++++ |+|++ +++++++||+|++|||.
20109 T Consensus 84 ~~~~~l~--y~d~~--~~~~~l~~miv~~CgC~ 112 (113)
20110 T 2ASK_B 84 TRYEAVS--FMDVN--STWRTVDRLSATACGCL 112 (113)
20111 T ss_dssp EEEEEEE--EEBTT--SCEEEEEEEEEEEEEEE
20112 T ss_pred eEeceee--eecCC--cEEEEECCeEEeccccc
20113 Confidence 9999877 77775 67899999999999995
20114
20115
20116 No 38
20117 >3FUB_D GDNF family receptor alpha-1, Glial; GFRALPHA1, ALL ALPHA GDNF, CYSTINE; HET: NAG, EDO; 2.35A {Rattus norvegicus}
20118 Probab=99.69 E-value=9.6e-22 Score=171.18 Aligned_cols=96 Identities=24% Similarity=0.517 Sum_probs=80.0 Template_Neff=6.800
20119
20120 Q NP_000548.2 394 KNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNH-AVIQTLMNSM--DPESTPPTCCVPTR 470 (501)
20121 Q Consensus 394 ~~~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h-~~i~~~~~~~--~~~~~~~pCC~P~~ 470 (501)
20122 ......||++.++|+|+||||+ | |+|++|+++||.|.|.++. ++| ++++.+++.. .+..+..|||+|++
20123 T Consensus 35 ~~~~~~Ccr~~l~V~F~dlGw~-~-iaP~~f~~~~C~G~C~~~~------t~h~~~l~~l~~~~~~~~~~~~~pCCvP~~ 106 (134)
20124 T 3FUB_D 35 RGKNRGCVLTAIHLNVTDLGLG-Y-ETKEELIFRYCSGSCDAAE------TTYDKILKNLSRNRRLVSDKVGQACCRPIA 106 (134)
20125 T ss_pred CCCCCcceEEEEEEeHHHcCCC-c-cCCCeEEeEEeeCCCCCCc------chHHHHHHHHHHcCCCCCCCCCCCeeeeeE
20126 Confidence 3457899999999999999998 6 5999999999999999982 356 5666665543 12357899999999
20127
20128
20129 Q NP_000548.2 471 LS-PISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20130 Q Consensus 471 ~~-~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20131 |+ +++ |++++ + ++++++||+|++|||.
20132 T Consensus 107 ~~~~l~--y~d~~-~-~~~~l~~mvv~~CgC~ 134 (134)
20133 T 3FUB_D 107 FDDDLS--FLDDN-L-VYHILRKHSAKRCGCI 134 (134)
20134 T ss_pred eCCcee--EECCC-c-eEEEEcCeEEecccCC
20135 Confidence 99 988 77776 4 7899999999999995
20136
20137
20138 No 39
20139 >1AGQ_C GLIAL CELL-DERIVED NEUROTROPHIC FACTOR; GROWTH FACTOR, NEUROTROPHIC FACTOR, CYSTINE; 1.9A {Rattus norvegicus} SCOP: g.17.1.2
20140 Probab=99.67 E-value=2.2e-21 Score=169.01 Aligned_cols=95 Identities=26% Similarity=0.544 Sum_probs=76.0 Template_Neff=6.700
20141
20142 Q NP_000548.2 395 NLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNH-AVIQTLMNSMD--PESTPPTCCVPTRL 471 (501)
20143 Q Consensus 395 ~~~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h-~~i~~~~~~~~--~~~~~~pCC~P~~~ 471 (501)
20144 .....||++.++|+|+||||+ | |+|.+|+++||.|.|.++. ++| ++++.+++... +..+..|||+|++|
20145 T Consensus 37 ~~~~~Cc~~~l~V~F~dlGW~-i-iaP~~~~~~~C~G~C~~~~------t~h~~~l~~l~~~~~~~~~~~~~pCCvP~~~ 108 (135)
20146 T 1AGQ_C 37 GKNRGCVLTAIHLNVTDLGLG-Y-ETKEELIFRYCSGSCEAAE------TMYDKILKNLSRSRRLTSDKVGQACCRPVAF 108 (135)
20147 T ss_dssp ----CCEEEEEEEEGGGGCSC-C-CCCCEEEEEEEESCCCCCC------SHHHHHHHHHHHTTCC----CCCCCEEEEEE
20148 T ss_pred CCCCCceEEEEEEEHHHcCCC-c-cCCCeEEeEEecCCCCCCc------chHHHHHHHHHhhcCCCCcccCCCeeeeeee
20149 Confidence 457899999999999999998 5 8999999999999999972 367 66666655432 33578999999999
20150
20151
20152 Q NP_000548.2 472 S-PISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20153 Q Consensus 472 ~-~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20154 + +++ |++++ +++++++||+|++|||.
20155 T Consensus 109 ~~~l~--y~d~~--~~~~~l~dmiv~~CgC~ 135 (135)
20156 T 1AGQ_C 109 DDDLS--FLDDS--LVYHILRKHSAKRCGCI 135 (135)
20157 T ss_dssp CCCEE--EECSS--SCEEEECSCSEEEEEEC
20158 T ss_pred cCCee--eecCC--eEEEEEcCeEEecccCC
20159 Confidence 9 999 77765 47899999999999995
20160
20161
20162 No 40
20163 >5TX2_A Transforming growth factor beta-2; Growth factor, CYTOKINE; 1.82A {Mus musculus}
20164 Probab=99.66 E-value=2.9e-21 Score=157.69 Aligned_cols=81 Identities=33% Similarity=0.827 Sum_probs=74.0 Template_Neff=7.400
20165
20166 Q NP_000548.2 396 LKARCSRKALHVNFK-DMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPI 474 (501)
20167 Q Consensus 396 ~~~~Cc~~~l~V~F~-dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l 474 (501)
20168 ....||+++++|+|+ ||||+ |||+|++|+++||.|.|..+. .+.+||+|++|+++
20169 T Consensus 12 ~~~~C~~~~~~v~f~~dlgw~-~Ii~P~~~~~~~C~G~C~~~~-----------------------~~~~CC~P~~~~~l 67 (93)
20170 T 5TX2_A 12 VQDNCCLRPLYIDFKRDLGWK-WIHEPKGYNANFCAGACPYRA-----------------------SKSPSCVSQDLEPL 67 (93)
20171 T ss_dssp CCSBSEEECCEEEHHHHHCCC-SEEECSEEECCEEECBCCCCS-----------------------SSCCCEEECCEEEE
20172 T ss_pred CCCCcEEEEEEEECchhcCCC-cEeCCCeEEcEEecccCCCCC-----------------------CCCCCceeceecce
20173 Confidence 478999999999999 99998 999999999999999998751 25799999999999
20174
20175
20176 Q NP_000548.2 475 SILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20177 Q Consensus 475 ~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20178 +|||++++ +++++.++||+|++|||+
20179 T Consensus 68 ~il~~~~~-~~~~~~l~~~~v~~CgC~ 93 (93)
20180 T 5TX2_A 68 TILYYIGN-TPKIEQLSNMIVKSCKCS 93 (93)
20181 T ss_dssp EEEEEETT-EEEEEEEEEEEECEEEEC
20182 T ss_pred EEEEEeCC-eEEEEEEcCcEEecCccC
20183 Confidence 99999986 578999999999999995
20184
20185
20186 No 41
20187 >5TX4_B TGF-beta receptor type-2 (E.C.2.7.11.30), Transforming; TGF-beta, TGF-beta type II receptor; 1.876A {Homo sapiens}
20188 Probab=99.66 E-value=3e-21 Score=157.29 Aligned_cols=81 Identities=31% Similarity=0.818 Sum_probs=74.3 Template_Neff=7.500
20189
20190 Q NP_000548.2 396 LKARCSRKALHVNFK-DMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPI 474 (501)
20191 Q Consensus 396 ~~~~Cc~~~l~V~F~-dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l 474 (501)
20192 ....||+++++|+|+ +|||+ |||+|++|+++||.|.|..+. .+.|||+|++|+++
20193 T Consensus 11 ~~~~C~~~~~~v~f~~~lgw~-~Ii~P~~~~~~~C~G~C~~~~-----------------------~~~~CC~P~~~~~~ 66 (92)
20194 T 5TX4_B 11 VQDNCCLRPLYIDFRKDLGWK-WIHEPKGYNANFCAGACPYRA-----------------------SKSPSCVSQDLEPL 66 (92)
20195 T ss_pred CCCCcEEEEEEEECchhcCCC-ceeCCCeEEcEEeeccCCCCC-----------------------CCCCceeccccCce
20196 Confidence 467999999999998 99998 999999999999999998752 25799999999999
20197
20198
20199 Q NP_000548.2 475 SILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20200 Q Consensus 475 ~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20201 +|||++++ +++++.++||+|++|+|+
20202 T Consensus 67 ~il~~~~~-~i~~~~~~~~~v~~C~C~ 92 (92)
20203 T 5TX4_B 67 TIVYYVGR-KPKVEQLSNMIVKSCKCS 92 (92)
20204 T ss_pred eEEEEeCC-eeEEEEEcCeEEecCCCC
20205 Confidence 99999987 678999999999999995
20206
20207
20208 No 42
20209 >2GYZ_A neurotrophic factor artemin isoform 3; neurotrophic factor, cystine-knot, HORMONE-GROWTH FACTOR; 1.76A {Homo sapiens}
20210 Probab=99.57 E-value=1.4e-19 Score=150.88 Aligned_cols=89 Identities=18% Similarity=0.342 Sum_probs=71.6 Template_Neff=7.300
20211
20212 Q NP_000548.2 399 RCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNH-AVIQTLMNSMD------PESTPPTCCVPTRL 471 (501)
20213 Q Consensus 399 ~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h-~~i~~~~~~~~------~~~~~~pCC~P~~~ 471 (501)
20214 .||+++++|+|+||||+ ||+|++|+++||.|+|..+.. ++ +.++.++.... +.....|||+|++|
20215 T Consensus 1 ~Cc~~~l~V~F~dlGw~--IiaP~~~~a~yC~G~C~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~pCC~P~~~ 72 (105)
20216 T 2GYZ_A 1 GCRLRSQLVPVRALGLG--HRSDELVRFRFCSGSCRRARS------PHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRY 72 (105)
20217 T ss_dssp CCEEEEEEEEGGGGSSS--CCCSSEEEEEEEESCCGGGCC------HHHHHHHHHHHTTCSCCCSSSCCCSSCCCEEEEE
20218 T ss_pred CCeeEEEEEeHHHcCCc--cccCCceeceEEeccCCCCCC------chHHHHHHHHHhcCCCCCCCCCCCCCCeeeeeee
20219 Confidence 49999999999999998 899999999999999999853 22 23323332221 24578999999999
20220
20221
20222 Q NP_000548.2 472 SPISILFIDSA-NNVVYKQYEDMVVES 497 (501)
20223 Q Consensus 472 ~~l~ily~d~~-~~~~~~~~~~mvv~~ 497 (501)
20224 ++++ |+|++ +.+++++++||+|..
20225 T Consensus 73 ~~l~--y~d~~~~~i~~~~lp~m~~~~ 97 (105)
20226 T 2GYZ_A 73 EAVS--FMDVNSTWRTVDRLSATACGC 97 (105)
20227 T ss_dssp EEEE--EECTTSCEEEEEEEEEEEEEC
20228 T ss_pred ceee--EEeCCCCeEEEEEeccceeec
20229 Confidence 9999 88876 578899999999875
20230
20231
20232 No 43
20233 >6Q2S_B Ubiquitin-like protein SMT3,Artemin, GDNF family; RET, receptor tyrosine kinase, cryo-EM; HET: NAG; 3.8A {Saccharomyces cerevisiae}
20234 Probab=99.47 E-value=2.9e-18 Score=163.18 Aligned_cols=93 Identities=20% Similarity=0.483 Sum_probs=77.2 Template_Neff=8.400
20235
20236 Q NP_000548.2 397 KARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNH-AVIQTLMNSMD------PESTPPTCCVPT 469 (501)
20237 Q Consensus 397 ~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h-~~i~~~~~~~~------~~~~~~pCC~P~ 469 (501)
20238 ...||++.++|+|++|||+ ||+|.+|+++||.|.|..+. ++| +.++.+++... ......|||+|+
20239 T Consensus 135 ~~~C~~~~~~V~f~~lgw~--ii~P~~~~~~~C~G~C~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~CC~P~ 206 (235)
20240 T 6Q2S_B 135 ARGCRLRSQLVPVRALGLG--HRSDELVRFRFCSGSCRRAR------SPHDLSLASLLGAGALRPPPGSRPVSQPCCRPT 206 (235)
20241 T ss_pred CceeeeecCccchHHcCCe--eecCCeEECccccCCCCCCC------CCHHHHHHHHHHcCCCCCCCCCCCCCCCccCce
20242 Confidence 5789999999999999998 58999999999999999983 255 45555554332 135789999999
20243
20244
20245 Q NP_000548.2 470 RLSPISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20246 Q Consensus 470 ~~~~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20247 +|++++ |++++ +++++++||+|++|||+
20248 T Consensus 207 ~~~~l~--y~~~~--~~~~~~~~m~v~~CgC~ 234 (235)
20249 T 6Q2S_B 207 RYEAVS--FMDVN--STWRTVDRLSATACGCL 234 (235)
20250 T ss_pred ecCeee--eecCC--eEEEEeCCcEEeccccc
20251 Confidence 999988 77764 67899999999999995
20252
20253
20254 No 44
20255 >6GFF_E Transforming growth factor beta-1, Leucine-rich; GARP, TGF-B1, Activation, Treg, IMMUNE; HET: BMA, MAN, NAG; 3.1A {Mus musculus}
20256 Probab=98.95 E-value=1.1e-13 Score=131.10 Aligned_cols=158 Identities=22% Similarity=0.234 Sum_probs=101.3 Template_Neff=9.700
20257
20258 Q NP_000548.2 143 SFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGN------SSVKLEAGLANTITSFIDKGQDDRG-P 215 (501)
20259 Q Consensus 143 ~qIL~kLGL~~~P~~~~~~~~~~~~~~p~~MldLY~~~~~~~~~~~~------~~~~~~~~~~n~Vrsf~~~~~~~~~-~ 215 (501)
20260 .+||++|||+++|+++.. .+.+++++|++||+.+......... ..+.+....+++|++|......... .
20261 T Consensus 22 ~~IL~~Lgl~~~P~~~~~----~~~~~p~~m~~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~~ 97 (249)
20262 T 6GFF_E 22 GQILSKLRLASPPSQGEV----PPGPLPEAVLALYNSTRDRVAGESAEPEPEPEADYYAKEVTRVLMVETHNEIYDKFKQ 97 (249)
20263 T ss_pred HHHHHHcCCCCCCCCCCC----CCCCccHHHHHHHHhhhccccCCCCCcccCCcccchhcccceeeeecCCCCCCCcccC
20264 Confidence 689999999999998651 1245689999999987665321100 0111223456788888654332100 1
20265
20266
20267 Q NP_000548.2 216 VVRKQRYVFDISALE----K-DGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPAALLDVRSVPGLDGSG 290 (501)
20268 Q Consensus 216 ~~~~~~l~FnlSsi~----~-e~V~~AeLrLy~~~~~~~~~~~~~~~~~~~~v~Vy~~~~~~~~~~ll~s~~v~~~~~~g 290 (501)
20269 ......+.|++++++ . +.|.+|+||||+..... ...|.||...... ...++..+.+.....++
20270 T Consensus 98 ~~~~~~l~F~ls~~~~~~~~~~~v~~AeL~l~~~~~~~-----------~~~v~iy~~~~~~-~~~~l~~~~v~~~~~~~ 165 (249)
20271 T 6GFF_E 98 STHSIYMFFNTSELREAVPEPVLLSRAELRLLRLKLKV-----------EQHVELYQKYSNN-SWRYLSNRLLAPSDSPE 165 (249)
20272 T ss_pred CCCcEEEEEecccCCCCCCCccceEEEEEEEEeCCCCC-----------cEEEEEEEecCCC-ceeEEEEEEeecCCCCc
20273 Confidence 234677999999742 2 47999999999987642 3566777643210 11123333221234579
20274
20275
20276 Q NP_000548.2 291 WEVFDIWKLFRNFKNSA--QLCLELEAW 316 (501)
20277 Q Consensus 291 Wv~fDVT~aV~~Wl~~~--nlgL~V~~~ 316 (501)
20278 |+.||||.+|+.|+.++ +++|.|.+.
20279 T Consensus 166 W~~~dvt~~v~~W~~~~~~n~gl~v~v~ 193 (249)
20280 T 6GFF_E 166 WLSFDVTGVVRQWLSRGGEIEGFRLSAH 193 (249)
20281 T ss_pred eEEEEcHHHHHHHHhCCcccceEEEEEE
20282 Confidence 99999999999999986 788886554
20283
20284
20285 No 45
20286 >6GFF_G Transforming growth factor beta-1, Leucine-rich; GARP, TGF-B1, Activation, Treg, IMMUNE; HET: MAN, NAG, BMA; 3.1A {Mus musculus}
20287 Probab=98.95 E-value=1.1e-13 Score=131.18 Aligned_cols=158 Identities=22% Similarity=0.234 Sum_probs=101.5 Template_Neff=9.600
20288
20289 Q NP_000548.2 143 SFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGN------SSVKLEAGLANTITSFIDKGQDDRG-P 215 (501)
20290 Q Consensus 143 ~qIL~kLGL~~~P~~~~~~~~~~~~~~p~~MldLY~~~~~~~~~~~~------~~~~~~~~~~n~Vrsf~~~~~~~~~-~ 215 (501)
20291 .+||++|||+++|++... .+.+++++|++||+.+......... ..+.+....+++|++|......... .
20292 T Consensus 22 ~~IL~~LgL~~~P~~~~~----~~~~~p~~m~~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~~ 97 (249)
20293 T 6GFF_G 22 GQILSKLRLASPPSQGEV----PPGPLPEAVLALYNSTRDRVAGESAEPEPEPEADYYAKEVTRVLMVETHNEIYDKFKQ 97 (249)
20294 T ss_dssp HHHHHHTTCSSCCCSTTC----CSSSCCHHHHHHHHHHHSCCCCC-------CGGGTSCEEEEEEECCCCCCCCHHHSCC
20295 T ss_pred HHHHHHcCCCCCCCCCCC----CCCCChHHHHHHHHHHHhhccCCCCCCCCCChhhhhhheeEeeEEeeccccccccccc
20296 Confidence 689999999999998651 2235689999999987655321100 0111223456788887654332100 1
20297
20298
20299 Q NP_000548.2 216 VVRKQRYVFDISALE----K-DGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPAALLDVRSVPGLDGSG 290 (501)
20300 Q Consensus 216 ~~~~~~l~FnlSsi~----~-e~V~~AeLrLy~~~~~~~~~~~~~~~~~~~~v~Vy~~~~~~~~~~ll~s~~v~~~~~~g 290 (501)
20301 ......+.|++++++ . +.|.+|+||||+..... ...|.||...... ...++..+.+.....++
20302 T Consensus 98 ~~~~~~l~F~ls~~~~~~~~~~~v~~AeL~l~~~~~~~-----------~~~v~iy~~~~~~-~~~~l~~~~v~~~~~~~ 165 (249)
20303 T 6GFF_G 98 STHSIYMFFNTSELREAVPEPVLLSRAELRLLRLKLKV-----------EQHVELYQKYSNN-SWRYLSNRLLAPSDSPE 165 (249)
20304 T ss_dssp CTTEEEEEEEHHHHHHHSSSGGGEEEEEEEEEECCBSS-----------CEEEEEEECCSSS-CCEEEEEEEECCBSSCE
20305 T ss_pred CCCcEEEEeehHHhhccCCCcceEEEEEEEEEEcCCCc-----------eEEEEEEEecCCC-ceeEeEEEEeCCCCCCC
20306 Confidence 234677999999752 2 47999999999987642 3567777643210 11123333221234579
20307
20308
20309 Q NP_000548.2 291 WEVFDIWKLFRNFKNSA--QLCLELEAW 316 (501)
20310 Q Consensus 291 Wv~fDVT~aV~~Wl~~~--nlgL~V~~~ 316 (501)
20311 |+.||||.+|+.|+.++ +++|.|.+.
20312 T Consensus 166 W~~~dVt~~v~~W~~~~~~n~~l~v~v~ 193 (249)
20313 T 6GFF_G 166 WLSFDVTGVVRQWLSRGGEIEGFRLSAH 193 (249)
20314 T ss_dssp EEEEECHHHHHHHHHSCCSEEEEEEEEC
20315 T ss_pred eEEEEhHHHHHHHHHcCCCccCEEEEEE
20316 Confidence 99999999999999987 788886554
20317
20318
20319 No 46
20320 >5HLZ_E Inhibin beta A chain; Growth factor, Precursor, Signalling, Signaling; 2.851A {Homo sapiens}
20321 Probab=98.74 E-value=1.8e-12 Score=124.55 Aligned_cols=155 Identities=15% Similarity=0.223 Sum_probs=99.6 Template_Neff=9.000
20322
20323 Q NP_000548.2 143 SFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGG------N----SSVKLEAGLANTITSFIDKGQDD 212 (501)
20324 Q Consensus 143 ~qIL~kLGL~~~P~~~~~~~~~~~~~~p~~MldLY~~~~~~~~~~~------~----~~~~~~~~~~n~Vrsf~~~~~~~ 212 (501)
20325 .+||++|||+.+|+++.. .+ .+++|++||+.+........ + ..++.....+++|++|.+.+.
20326 T Consensus 41 ~~IL~~LGl~~~P~~~~~----~~--~p~~M~~LY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~sf~~~~~-- 112 (270)
20327 T 5HLZ_E 41 KHILNMLHLKKRPDVTQP----VP--KAALLNAIRKLHVGKVGENGYVEIEDDIGRRAEMNELMEQTSEIITFAESGT-- 112 (270)
20328 T ss_pred HHHHHHcCCCCCCCCCCC----CC--hHHHHHHHHHhhcCcccCCCceeccccccchhhhhhhhcceEEEEEEecCCC--
20329 Confidence 689999999999998651 11 38999999998765442100 0 001123345678888876532
20330
20331
20332 Q NP_000548.2 213 RGPVVRKQRYVFDISA-LEK-DGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGR------------------ 272 (501)
20333 Q Consensus 213 ~~~~~~~~~l~FnlSs-i~~-e~V~~AeLrLy~~~~~~~~~~~~~~~~~~~~v~Vy~~~~~~------------------ 272 (501)
20334 ....+.|+++. .+. +.|.+|+||||+....... ......+.||......
20335 T Consensus 113 -----~~~~l~F~~s~~~~~~~~v~~AeL~l~~~~~~~~~------~~~~~~i~vy~~~~~~~~~~~~~~~~~~~g~~~~ 181 (270)
20336 T 5HLZ_E 113 -----ARKTLHFEISKEGSDLSVVERAEVWLFLKVPKANR------TRTKVTIRLFQQQKHPQGSLDTGEEAEEVGLKGE 181 (270)
20337 T ss_pred -----ccEEEEEEecCCCCCceeEEEEEEEEEEeCCCcCC------CcceEEEEEEEEeeCCCCCCCCCchhhhhcCCcc
20338 Confidence 34578999987 433 4699999999998764310 1124566777543210
20339
20340
20341 Q NP_000548.2 273 QPAALLDVRSVPGLDGSGWEVFDIWKLFRNFKNSA--QLCLELEAWE 317 (501)
20342 Q Consensus 273 ~~~~ll~s~~v~~~~~~gWv~fDVT~aV~~Wl~~~--nlgL~V~~~~ 317 (501)
20343 ....++.++.+ .....+|++|||+.+|+.|+..+ +++|.|.+..
20344 T Consensus 182 ~~~~ll~s~~v-~~~~~gW~~fdVt~~v~~W~~~~~~n~gl~v~~~~ 227 (270)
20345 T 5HLZ_E 182 RSELLLSEKVV-DARKSTWHVFPVSSSIQRLLDQGKSSLDVRIACEQ 227 (270)
20346 T ss_pred ceEEEEEEEEe-ecCCCceEEEEChHHHHHHHHcCCCCeeEEEEEEe
20347 Confidence 01112333333 23457999999999999999986 7898887754
20348
20349
20350 No 47
20351 >4YCG_B pro-BMP9 prodomain, human BMP9 growth; pro-BMP complex, morphogen, transforming growth; HET: NAG, ZN; 3.3A {Mus musculus}
20352 Probab=98.69 E-value=3.5e-12 Score=124.35 Aligned_cols=152 Identities=18% Similarity=0.323 Sum_probs=81.5 Template_Neff=8.500
20353
20354 Q NP_000548.2 143 SFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGNSSVKLEAGLANTITSFIDKGQDDRG----PVVR 218 (501)
20355 Q Consensus 143 ~qIL~kLGL~~~P~~~~~~~~~~~~~~p~~MldLY~~~~~~~~~~~~~~~~~~~~~~n~Vrsf~~~~~~~~~----~~~~ 218 (501)
20356 .+||++|||.++|++... ...+++||++||+.+...... ...+++|++|.+....... ....
20357 T Consensus 41 ~~IL~~LgL~~~P~~~~~-----~~~~p~yMl~LY~~~~~~~~~---------~~~~ntvRsf~~~~~~~~~~~~~~~~~ 106 (296)
20358 T 4YCG_B 41 VDFLRSLNLSGIPSQDKT-----RAEPPQYMIDLYNRYTTDKSS---------TPASNIVRSFSVEDAISTAATEDFPFQ 106 (296)
20359 T ss_dssp -------------------------CCCHHHHHHHHHHHHCTTS---------CCSCSEEEEEECCEEEEECCCSSSCSE
20360 T ss_pred HHHHHHCCCCCCCCCCCC-----CCCCCHHHHHHHHHhhcCCCC---------CCCccceeeeehhhhcccccCCCCCCC
20361 Confidence 589999999999997641 124589999999987655321 1245677777654332110 0124
20362
20363
20364 Q NP_000548.2 219 KQRYVFDISALEK-DGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQ-------PAALLDVRSVPGLDGSG 290 (501)
20365 Q Consensus 219 ~~~l~FnlSsi~~-e~V~~AeLrLy~~~~~~~~~~~~~~~~~~~~v~Vy~~~~~~~-------~~~ll~s~~v~~~~~~g 290 (501)
20366 ...+.|+++ ++. +.|..|+||||+........ .......|.||....... ...++... .....+
20367 T Consensus 107 ~~~L~F~lS-~p~~e~v~~AeLrl~~~~~~~~~~----~~~~~~~V~Vy~v~~~~~~~~~~~~~~~lL~~~---~~~~~g 178 (296)
20368 T 4YCG_B 107 KHILIFNIS-IPRHEQITRAELRLYVSCQNDVDS----THGLEGSMVVYDVLEDSETWDQATGTKTFLVSQ---DIRDEG 178 (296)
20369 T ss_dssp EEEEECCCC-CCTTEEEEEEEEEEEEEECSCTTG----GGCCCEEEEEEEEEECCSSCSSSSSEEEEEEEE---EECSSE
20370 T ss_pred cEEEEEEEe-cCchhceEEEEEEEEeecCCCccC----CCCcEEEEEEEEeccccccccccCCcEEEEEEE---EcCCCe
20371 Confidence 567899998 653 68999999999887643110 011245677776432100 01112222 234579
20372
20373
20374 Q NP_000548.2 291 WEVFDIWKLFRNFKNSA----QLCLELEAW 316 (501)
20375 Q Consensus 291 Wv~fDVT~aV~~Wl~~~----nlgL~V~~~ 316 (501)
20376 |+.||||.+|+.|+.++ +++|+|.+.
20377 T Consensus 179 W~~fDVT~~V~~W~~~~~~~~~~gL~v~~~ 208 (296)
20378 T 4YCG_B 179 WETLEVSSAVKRWVRADSTTNKNKLEVTVQ 208 (296)
20379 T ss_dssp EEEEECHHHHHHHHSCCSSSCCSEEEEEEE
20380 T ss_pred eEEEEhHHHHHHHHHCCCCCCCceEEEEEE
20381 Confidence 99999999999999985 478887664
20382
20383
20384 No 48
20385 >4YCI_B mouse pro-BMP9 prodomain, pro-BMP9 growth; pro-BMP complex, morphogen, transforming growth; HET: ZN, NAG; 3.25A {Mus musculus}
20386 Probab=98.69 E-value=3.5e-12 Score=124.35 Aligned_cols=152 Identities=18% Similarity=0.323 Sum_probs=81.5 Template_Neff=8.500
20387
20388 Q NP_000548.2 143 SFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGNSSVKLEAGLANTITSFIDKGQDDRG----PVVR 218 (501)
20389 Q Consensus 143 ~qIL~kLGL~~~P~~~~~~~~~~~~~~p~~MldLY~~~~~~~~~~~~~~~~~~~~~~n~Vrsf~~~~~~~~~----~~~~ 218 (501)
20390 .+||++|||.++|++... ...+++||++||+.+...... ...+++|++|.+....... ....
20391 T Consensus 41 ~~IL~~LgL~~~P~~~~~-----~~~~p~yMl~LY~~~~~~~~~---------~~~~ntvRsf~~~~~~~~~~~~~~~~~ 106 (296)
20392 T 4YCI_B 41 VDFLRSLNLSGIPSQDKT-----RAEPPQYMIDLYNRYTTDKSS---------TPASNIVRSFSVEDAISTAATEDFPFQ 106 (296)
20393 T ss_dssp -------------------------CCCHHHHHHHHHHHHCTTS---------CCSCSEEEEEECCEEEEECCCSSSCSE
20394 T ss_pred HHHHHHCCCCCCCCCCCC-----CCCCCHHHHHHHHHhhcCCCC---------CCCccceeeeehhhhcccccCCCCCCC
20395 Confidence 589999999999997641 124589999999987655321 1245677777654332110 0124
20396
20397
20398 Q NP_000548.2 219 KQRYVFDISALEK-DGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQ-------PAALLDVRSVPGLDGSG 290 (501)
20399 Q Consensus 219 ~~~l~FnlSsi~~-e~V~~AeLrLy~~~~~~~~~~~~~~~~~~~~v~Vy~~~~~~~-------~~~ll~s~~v~~~~~~g 290 (501)
20400 ...+.|+++ ++. +.|..|+||||+........ .......|.||....... ...++... .....+
20401 T Consensus 107 ~~~L~F~lS-~p~~e~v~~AeLrl~~~~~~~~~~----~~~~~~~V~Vy~v~~~~~~~~~~~~~~~lL~~~---~~~~~g 178 (296)
20402 T 4YCI_B 107 KHILIFNIS-IPRHEQITRAELRLYVSCQNDVDS----THGLEGSMVVYDVLEDSETWDQATGTKTFLVSQ---DIRDEG 178 (296)
20403 T ss_dssp EEEEECCCC-CCTTEEEEEEEEEEEEEECSCTTC----TTCCCEEEEEEEEEECCSSCSTTSSEEEEEEEE---EECSSE
20404 T ss_pred cEEEEEEEe-cCchhceEEEEEEEEeecCCCccC----CCCcEEEEEEEEeccccccccccCCcEEEEEEE---EcCCCe
20405 Confidence 567899998 653 68999999999887643110 011245677776432100 01112222 234579
20406
20407
20408 Q NP_000548.2 291 WEVFDIWKLFRNFKNSA----QLCLELEAW 316 (501)
20409 Q Consensus 291 Wv~fDVT~aV~~Wl~~~----nlgL~V~~~ 316 (501)
20410 |+.||||.+|+.|+.++ +++|+|.+.
20411 T Consensus 179 W~~fDVT~~V~~W~~~~~~~~~~gL~v~~~ 208 (296)
20412 T 4YCI_B 179 WETLEVSSAVKRWVRADSTTNKNKLEVTVQ 208 (296)
20413 T ss_dssp EEEEECHHHHHHHHSCTTSSCCSEEEEEEE
20414 T ss_pred eEEEEhHHHHHHHHHCCCCCCCceEEEEEE
20415 Confidence 99999999999999985 478887664
20416
20417
20418 No 49
20419 >4NT5_A von Willebrand factor; cystine knot, dimerization of VWF; HET: SO4, NAG; 3.281A {Homo sapiens}
20420 Probab=75.72 E-value=0.27 Score=37.97 Aligned_cols=65 Identities=22% Similarity=0.456 Sum_probs=39.6 Template_Neff=7.800
20421
20422 Q NP_000548.2 422 LEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20423 Q Consensus 422 ~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20424 ..+..++|.|.|...... +... . .....-.||.|.++....|...=.+|.. ..+.=+++.+|+|.
20425 T Consensus 37 ~~v~~~~C~G~C~S~~~~-----~~~~--~------~~~~~c~CC~p~~~~~~~v~L~C~~g~~--~~~~~~~i~~C~C~ 101 (107)
20426 T 4NT5_A 37 VEVDIHYCQGKCASKAMY-----SIDI--N------DVQDQCSCCSPTRTEPMQVALHCTNGSV--VYHEVLNAMECKCS 101 (107)
20427 T ss_dssp SCEEEEECCCBCCEEEEE-----ETTT--T------EEEEEEEEEEESSEEEEEEEEECTTSCE--EEEEEEEECCEEEE
20428 T ss_pred eeeeceEEeEeecCceee-----cCCc--c------ceEeecCcccCeEeEeEEEEEECCCCCE--EEEEEEeeeeceEE
20429 Confidence 567889999999875321 1100 0 0123578999999987776444333332 23344678899994
20430
20431
20432 No 50
20433 >2KD3_A Sclerostin; Protein, antagonist of CYTOKINE, PROTEIN; NMR {Mus musculus}
20434 Probab=73.48 E-value=0.35 Score=38.01 Aligned_cols=73 Identities=15% Similarity=0.291 Sum_probs=40.9 Template_Neff=6.600
20435
20436 Q NP_000548.2 419 IAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANN-VVYKQYEDMVVES 497 (501)
20437 Q Consensus 419 iaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ily~d~~~~-~~~~~~~~mvv~~ 497 (501)
20438 ++.+.+...+|.|.|....... ...... ... . ......||.|.++....|.+.=.+|. .+ ...-+.|.+
20439 T Consensus 39 ~S~~~v~~~~C~G~C~s~s~~~---~~~~~~-~~~-~---~~~~c~CC~p~~t~~r~V~l~C~dG~~~~--~~~~~~V~~ 108 (113)
20440 T 2KD3_A 39 RSAKPVTELVCSGQCGPARLLP---NAIGRV-KWW-R---PNGPDFRCIPDRYRAQRVQLLCPGGAAPR--SRKVRLVAS 108 (113)
20441 T ss_dssp EECCCCCBCCCCCCCSCCCCCC---CCTTCC-SSS-C---SSCCCCCCEEEEEEEEEEEEECTTSEE------EEEEEEE
20442 T ss_pred eeCCccccceeeeeCCCCccCC---cccCCC-Ccc-c---ccCCCccccCceeEEEEEEEECCCCCeeE--EEEeEEEee
20443 Confidence 4456678889999998653210 000000 000 0 12357899999999877655433342 22 334468899
20444
20445
20446 Q NP_000548.2 498 CGCR 501 (501)
20447 Q Consensus 498 CgC~ 501 (501)
20448 |+|.
20449 T Consensus 109 C~C~ 112 (113)
20450 T 2KD3_A 109 CKCK 112 (113)
20451 T ss_dssp EECC
20452 T ss_pred cccC
20453 Confidence 9994
20454
20455
20456 No 51
20457 >4YU8_A Neuroblastoma suppressor of tumorigenicity 1; BMP Binding Protein, NBL1 DAN; HET: NAG; 1.8A {Homo sapiens}
20458 Probab=70.00 E-value=0.48 Score=38.53 Aligned_cols=88 Identities=13% Similarity=0.121 Sum_probs=41.4 Template_Neff=7.100
20459
20460 Q NP_000548.2 398 ARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISIL 477 (501)
20461 Q Consensus 398 ~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~il 477 (501)
20462 ..|....+...+..=| - . +..+..++|.|.|....... ... ... .....-.||.|.++....|-
20463 T Consensus 32 ~~C~~~~~~~~I~~~g---C-~-s~~V~~~~C~G~C~S~s~~~----~~~---~~~----~~~~~CsCC~p~~~~~~~V~ 95 (139)
20464 T 4YU8_A 32 AWCEAKNITQIVGHSG---C-E-AKSIQNRACLGQCFSYSVPN----TFP---QST----ESLVHCDSCMPAQSMWEIVT 95 (139)
20465 T ss_dssp CEEEEEEEEEEECCTT---S-C-CEEEEEEEEEEECCC------------------------------EEEEEEEEEEEE
20466 T ss_pred CccEEEeeEEEEecCC---c-e-eeeeecceeeceecccccCC----CCC---CCc----cceeecCcccCeEEEEEEEE
20467 Confidence 3566555444443211 1 2 25678899999998753210 000 000 01123469999999977664
20468
20469
20470 Q NP_000548.2 478 FIDSANNV-VYKQYEDMVVESCGCR 501 (501)
20471 Q Consensus 478 y~d~~~~~-~~~~~~~mvv~~CgC~ 501 (501)
20472 ..=.++.. ....+.=..+.+|+|.
20473 T Consensus 96 L~C~~g~~~~~~~~~~~~v~sC~C~ 120 (139)
20474 T 4YU8_A 96 LECPGHEEVPRVDKLVEKILHCSCQ 120 (139)
20475 T ss_dssp EECTTCSSSCEEEEEEEEEEEEEEC
20476 T ss_pred EeCCCCCCcccEEEEEEeeeecccc
20477 Confidence 33233322 0022333478999995
20478
20479
20480 No 52
20481 >2K8P_A Sclerostin; WNT SIGNALLING PATHWAY, BONE FORMATION; NMR {Homo sapiens}
20482 Probab=66.67 E-value=0.66 Score=39.89 Aligned_cols=74 Identities=18% Similarity=0.288 Sum_probs=43.0 Template_Neff=5.300
20483
20484 Q NP_000548.2 419 IAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESC 498 (501)
20485 Q Consensus 419 iaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ily~d~~~~~~~~~~~~mvv~~C 498 (501)
20486 .+.+.+...+|.|.|...... .+.. -...... ......||+|.+.....|-+.=.+|. ....+.-|+|.+|
20487 T Consensus 71 ~S~kpV~~~~C~G~C~~~s~~----~~~~-~~~k~~~---~~~~~~CC~P~rTrtrrV~f~C~DGt-~t~~~~v~~V~sC 141 (189)
20488 T 2K8P_A 71 RSAKPVTELVCSGQCGPARLL----PNAI-GRGKWWR---PSGPDFRCIPDRYRAQRVQLLCPGGE-APRARKVRLVASC 141 (189)
20489 T ss_dssp EESSCEEEEEECCCCCCCCCC----SSCC-CSSCCCS---CCCCCCCCEECCEEEEEEEEECCTTS-CCEEEEEEEECCE
20490 T ss_pred ecCCceeeeEEeeeCCCcccC----CCcc-cCCCccC---CCCCCCCCCCCeeEEEEEEEECCCCC-cceeEEeeEeeeC
20491 Confidence 556777889999999864321 0100 0000001 12357899999988766655434342 0123345789999
20492
20493
20494 Q NP_000548.2 499 GCR 501 (501)
20495 Q Consensus 499 gC~ 501 (501)
20496 +|.
20497 T Consensus 142 kCk 144 (189)
20498 T 2K8P_A 142 KCK 144 (189)
20499 T ss_dssp ECC
20500 T ss_pred CCc
20501 Confidence 994
20502
20503
20504 No 53
20505 >4JPH_D Gremlin-2; Cystine knot, DAN domain, CAN; HET: GSH, GOL, CIT; 2.25A {Mus musculus}
20506 Probab=65.08 E-value=0.72 Score=37.91 Aligned_cols=88 Identities=14% Similarity=0.239 Sum_probs=48.1 Template_Neff=6.700
20507
20508 Q NP_000548.2 398 ARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISIL 477 (501)
20509 Q Consensus 398 ~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~il 477 (501)
20510 ..|....+...+..=|= .+ ..+..++|.|.|....... ....... ....-.||.|.++....|.
20511 T Consensus 51 ~~C~~~~~~q~I~~~gC----~s-~~V~~~~C~G~C~S~s~p~----~~~~~~~-------~~~~CsCC~p~~~~~~~V~ 114 (148)
20512 T 4JPH_D 51 DWCKTQPLRQTVSEEGC----RS-RTILNRFCYGQCNSFYIPR----HVKKEED-------SFQSCAFCKPQRVTSVIVE 114 (148)
20513 T ss_dssp CEEEEEEEEEEECCTTS----CC-EEEEEEEEEEEEEEEEEEC----CCSSSCC-------EEEEEEEEEEEEEEEEEEE
20514 T ss_pred CceeeEeceEEEccCCc----ee-eeEEeceeeeecCcccccc----cCCCccc-------cccccCcccCeEEEEEEEE
20515 Confidence 45776666555442221 22 4678899999998643210 0000000 1234689999999976664
20516
20517
20518 Q NP_000548.2 478 FIDSANNVVYKQYEDMVVESCGCR 501 (501)
20519 Q Consensus 478 y~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20520 ..=.++.-......=..|.+|+|.
20521 T Consensus 115 L~C~~g~~~~~~~~v~~V~sC~C~ 138 (148)
20522 T 4JPH_D 115 LECPGLDPPFRIKKIQKVKHCRCM 138 (148)
20523 T ss_dssp ECCTTSSSSCEEEEEEEEEEEEEE
20524 T ss_pred EeCCCCCCCceEEEEEeeeeCcee
20525 Confidence 332222211122334588999995
20526
20527
20528 No 54
20529 >4X1J_B Neuroblastoma suppressor of tumorigenicity 1; BMP antagonist, DAN family, Cystine-knot; HET: NAG; 2.5A {Homo sapiens}
20530 Probab=64.18 E-value=0.74 Score=35.85 Aligned_cols=88 Identities=13% Similarity=0.131 Sum_probs=46.1 Template_Neff=7.700
20531
20532 Q NP_000548.2 398 ARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISIL 477 (501)
20533 Q Consensus 398 ~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~il 477 (501)
20534 ..|....+...+..=|= .+..+..++|.|.|....... ... ... .....-.||.|.++....|.
20535 T Consensus 17 ~~C~~~~~~~~i~~~gC-----~s~~i~~~~C~G~C~S~~~~~----~~~---~~~----~~~~~C~CC~p~~~~~~~V~ 80 (116)
20536 T 4X1J_B 17 AWCEAKNITQIVGHSGC-----EAKSIQNRACLGQCFSYSVPN----TFP---QST----ESLVHCDSCMPAQSMWEIVT 80 (116)
20537 T ss_dssp CEEEEEEEEEEECCTTS-----CCEEEEEEEEEEEEEEEECC------------------CTTEEEEEEEEEEEEEEEEE
20538 T ss_pred CccEEEEeEEEEccCCc-----cceeEecceEeeeeeeeeecC----CCC---CCC----cceeecCCccceEEEEEEEE
20539 Confidence 35666555444432111 123578899999998643210 000 000 01234579999999987764
20540
20541
20542 Q NP_000548.2 478 FIDSANNV-VYKQYEDMVVESCGCR 501 (501)
20543 Q Consensus 478 y~d~~~~~-~~~~~~~mvv~~CgC~ 501 (501)
20544 ..=.++.- ......=.++.+|+|.
20545 T Consensus 81 L~C~~g~~~~~~~~~~~~v~~C~C~ 105 (116)
20546 T 4X1J_B 81 LECPGHEEVPRVDKLVEKILHCSCQ 105 (116)
20547 T ss_dssp EECTTCSSSSEEEEEEEEEEEEEEE
20548 T ss_pred EECCCCCCCccEEEEEEeeEecccc
20549 Confidence 43233322 1122333478999995
20550
20551
20552 No 55
20553 >5AEJ_A GREMLIN-1; SIGNALING PROTEIN, SIGNALING, GREMLIN, GROWTH; HET: SO4; 1.904A {HOMO SAPIENS}
20554 Probab=62.64 E-value=0.87 Score=37.64 Aligned_cols=87 Identities=15% Similarity=0.248 Sum_probs=48.6 Template_Neff=6.100
20555
20556 Q NP_000548.2 397 KARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISI 476 (501)
20557 Q Consensus 397 ~~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~i 476 (501)
20558 ...|....+...+..=|= . +..+..++|.|.|...... ... . .. . .....-.||.|.++....|
20559 T Consensus 59 ~~~C~~~~~~q~I~~~gC----~-S~~V~~~~C~G~C~S~s~p-----s~~-~-~~---~-~~~~~CsCC~p~~s~~~~V 122 (152)
20560 T 5AEJ_A 59 RDWCKTQPLKQTIHEEGC----N-SRTIINRFCYGQCNSFYIP-----RHI-R-KE---E-GSFQSCSFCKPKKFTTMMV 122 (152)
20561 T ss_dssp CCEEEEEEEEEEECCTTS----C-CEEEEEEEEEEEEEEEEEE-----EEE-T-TE---E-EEEEEEEEEEEEEEEEEEE
20562 T ss_pred CCceeeeeceeEEccCCc----e-eceEEeeeceeecccCeec-----ccc-c-cc---C-CceeecCcccceEEEEEEE
20563 Confidence 456877766555542221 2 2568899999999864321 100 0 00 0 0122467999999987666
20564
20565
20566 Q NP_000548.2 477 LFIDSANNV--VYKQYEDMVVESCGCR 501 (501)
20567 Q Consensus 477 ly~d~~~~~--~~~~~~~mvv~~CgC~ 501 (501)
20568 ...=.++.. +.+.+ ..+.+|.|.
20569 T Consensus 123 ~L~Cpdg~~~~~~~~v--~~V~sC~C~ 147 (152)
20570 T 5AEJ_A 123 TLNCPELQPPTKKKRV--TRVKQCRCI 147 (152)
20571 T ss_dssp EEECTTSSSSEEEEEE--EEEEEEEEE
20572 T ss_pred EEECCCCCCCceEEEE--EeceeceeE
20573 Confidence 333222322 23333 578999995
20574
20575
20576 No 56
20577 >5HK5_G Gremlin-2, Growth/differentiation factor 5; DAN-family, Bone Morphogenetic Proteins, CYTOKINE; 2.9A {Mus musculus}
20578 Probab=61.90 E-value=0.91 Score=37.23 Aligned_cols=86 Identities=15% Similarity=0.240 Sum_probs=46.5 Template_Neff=6.600
20579
20580 Q NP_000548.2 398 ARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISIL 477 (501)
20581 Q Consensus 398 ~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~il 477 (501)
20582 ..|....+...+..=|= .+ ..+..++|.|.|....... ....... ....-.||.|.++....|.
20583 T Consensus 50 ~~C~~~~~~q~I~~~gC----~s-~~V~~~~C~G~C~S~s~ps----~~~~~~~-------~~~~CsCC~p~~~~~~~V~ 113 (147)
20584 T 5HK5_G 50 DWCKTQPLRQTVSEEGC----RS-RTILNRFCYGQCNSFYIPR----HVKKEED-------SFQSCAFCKPQRVTSVIVE 113 (147)
20585 T ss_pred CceeeEeceEEEccCCc----ee-eeEEeceeeeecCcccccc----cCCCccc-------cccccCcccCeEEEEEEEE
20586 Confidence 35665555544432121 22 4578899999998643210 0000000 1234679999999976663
20587
20588
20589 Q NP_000548.2 478 FIDSANNV--VYKQYEDMVVESCGCR 501 (501)
20590 Q Consensus 478 y~d~~~~~--~~~~~~~mvv~~CgC~ 501 (501)
20591 ..=.++.. +.+. =.+|.+|+|.
20592 T Consensus 114 L~C~dg~~~~~~~~--~~~V~sC~C~ 137 (147)
20593 T 5HK5_G 114 LECPGLDPPFRIKK--IQKVKHCRCM 137 (147)
20594 T ss_pred EeCCCCCCCceEEE--EEeeeeCcee
20595 Confidence 33222221 2333 3578999994
20596
20597
20598 No 57
20599 >5BPU_A Frizzled-4; Wnt signalling pathway, Norrie disease; HET: GGL; 2.4A {Homo sapiens}
20600 Probab=57.82 E-value=1.2 Score=34.98 Aligned_cols=72 Identities=21% Similarity=0.280 Sum_probs=38.3 Template_Neff=7.700
20601
20602 Q NP_000548.2 422 LEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR 501 (501)
20603 Q Consensus 422 ~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~ily~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20604 ..+..++|.|.|....... ........ ........-.||.|.++....+...=.++..+. ..-.++.+|.|.
20605 T Consensus 37 ~~v~~~~C~G~C~S~~~~~----p~~~~~~~--~~~~~~~~C~CC~p~~~~~~~v~l~C~~g~~~~--~~~~~i~~C~C~ 108 (122)
20606 T 5BPU_A 37 KMVLLARCEGHCSQASRSE----PLVSFSTV--LKQPFRSSCHCCRPQTSKLKALRLRCSGGMRLT--ATYRYILSCHCE 108 (122)
20607 T ss_pred CcEeceeeeccccceeecC----CCcccCCC--CCCcceeeeecCcCeEeEEEEEEEECCCCCeEE--EEEEEEEeceee
20608 Confidence 6678899999998753200 00000000 000012345899999988766533323332222 333478899994
20609
20610
20611 No 58
20612 >5BQ8_C Norrin; Wnt signalling pathway, Norrie disease; HET: MLY; 2.0A {Homo sapiens}
20613 Probab=53.96 E-value=1.5 Score=34.27 Aligned_cols=93 Identities=19% Similarity=0.268 Sum_probs=46.5 Template_Neff=7.800
20614
20615 Q NP_000548.2 398 ARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISIL 477 (501)
20616 Q Consensus 398 ~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~il 477 (501)
20617 ..|....+...+..=.. .- .. ..+..++|.|.|....... ........ ........-.||.|.++....|.
20618 T Consensus 16 ~~C~~~~~~~~i~~~~~-gC-~s-~~v~~~~C~G~C~S~~~~~----p~~~~~~~--~~~~~~~~C~CC~p~~~~~~~V~ 86 (122)
20619 T 5BQ8_C 16 RRCMRHHYVDSISHPLY-KC-SS-KMVLLARCEGHCSQASRSE----PLVSFSTV--LKQPFRSSCHCCRPQTSKLKALR 86 (122)
20620 T ss_dssp TSSEEEEEEEEECCSSS-CB-CC-EEEEEEEEEECCSSCEEEE----ECCEETTB--CCCSEEEECEEEEEEEEEEEEEE
20621 T ss_pred CCeEEEeeEEEEEcCCC-Cc-ee-ceeEeeeEEEecccceecC----CccccCCC--CCCCceeEceecCCeEeEEEEEE
20622 Confidence 45666555444432100 11 22 6678899999998753200 00000000 00001234589999998876653
20623
20624
20625 Q NP_000548.2 478 FIDSANNVVYKQYEDMVVESCGCR 501 (501)
20626 Q Consensus 478 y~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20627 ..=.++..+ ...-+++.+|.|.
20628 T Consensus 87 l~C~~g~~~--~~~~~~i~~C~C~ 108 (122)
20629 T 5BQ8_C 87 LRCSGGMRL--TATYRYILSCHCE 108 (122)
20630 T ss_dssp EEETTTEEE--EEEEEEEEEEEEE
20631 T ss_pred EECCCCceE--EEEEEEEEeceee
20632 Confidence 332333322 2334578999994
20633
20634
20635 No 59
20636 >5BQE_A Frizzled-4; Wnt signalling pathway, Norrie disease; HET: MLY, NAG, PG0; 2.3A {Homo sapiens}
20637 Probab=53.96 E-value=1.5 Score=34.27 Aligned_cols=93 Identities=19% Similarity=0.268 Sum_probs=46.5 Template_Neff=7.800
20638
20639 Q NP_000548.2 398 ARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISIL 477 (501)
20640 Q Consensus 398 ~~Cc~~~l~V~F~dlGW~~wIiaP~~~~a~yC~G~C~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~pCC~P~~~~~l~il 477 (501)
20641 ..|....+...+..=.. .- .. ..+..++|.|.|....... ........ ........-.||.|.++....|.
20642 T Consensus 16 ~~C~~~~~~~~i~~~~~-gC-~s-~~v~~~~C~G~C~S~~~~~----p~~~~~~~--~~~~~~~~C~CC~p~~~~~~~V~ 86 (122)
20643 T 5BQE_A 16 RRCMRHHYVDSISHPLY-KC-SS-KMVLLARCEGHCSQASRSE----PLVSFSTV--LKQPFRSSCHCCRPQTSKLKALR 86 (122)
20644 T ss_dssp TSSEEEEEEEEECCSSS-CB-CC-EEEEEEEEEECCSSCEEEE----ECCBCSSS--CSSCEEEECEEEEEEEEEEEEEE
20645 T ss_pred CCeEEEeeEEEEEcCCC-Cc-ee-ceeEeeeEEEecccceecC----CccccCCC--CCCCceeEceecCCeEeEEEEEE
20646 Confidence 45666555444432100 11 22 6678899999998753200 00000000 00001234589999998876653
20647
20648
20649 Q NP_000548.2 478 FIDSANNVVYKQYEDMVVESCGCR 501 (501)
20650 Q Consensus 478 y~d~~~~~~~~~~~~mvv~~CgC~ 501 (501)
20651 ..=.++..+ ...-+++.+|.|.
20652 T Consensus 87 l~C~~g~~~--~~~~~~i~~C~C~ 108 (122)
20653 T 5BQE_A 87 LRCSGGMRL--TATYRYILSCHCE 108 (122)
20654 T ss_dssp EEBSSSCEE--EEEEEEEEEEEEE
20655 T ss_pred EECCCCceE--EEEEEEEEeceee
20656 Confidence 332333322 2334578999994
20657
20658
20659 Query NP_000836.2
20660 Match_columns 908
20661 No_of_seqs 3628 out of 54127
20662 Neff 10.7604
20663 Searched_HMMs 7012
20664 Date Sun Jul 26 14:02:06 2020
20665 Command /home/guerler/hh-suite/build/bin/hhblits -i /home/guerler/human/fasta/NP_00/NP_000836.2.fasta -d /home/guerler/pdb70/pdb70 -o /home/guerler/human/hhr/NP_00/NP_000836.2.hhr
20666
20667 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
20668 1 6N4X_A Metabotropic glutamate 100.0 2.5E-77 1.8E-81 724.0 0.0 801 35-855 30-845 (877)
20669 2 6N52_B Metabotropic glutamate 100.0 1.2E-76 8.4E-81 718.1 0.0 803 34-856 29-846 (871)
20670 3 6N51_B Metabotropic glutamate 100.0 6.7E-76 4.8E-80 706.5 0.0 786 37-842 4-804 (804)
20671 4 6W2Y_A Gamma-aminobutyric acid 100.0 3.8E-66 2.8E-70 620.7 0.0 685 36-853 22-734 (829)
20672 5 6W2X_B Gamma-aminobutyric acid 100.0 8.6E-65 6.2E-69 611.4 0.0 678 36-852 13-725 (908)
20673 6 6UO8_A Gamma-aminobutyric acid 100.0 9.3E-65 6.7E-69 605.5 0.0 682 42-856 3-712 (762)
20674 7 6UO8_B Gamma-aminobutyric acid 100.0 2.2E-64 1.6E-68 602.9 0.0 675 39-852 9-718 (779)
20675 8 7C7Q_A Gamma-aminobutyric acid 100.0 3.4E-62 2.5E-66 592.4 0.0 685 40-855 166-876 (879)
20676 9 2E4U_A Metabotropic glutamate 100.0 1.2E-43 8.6E-48 406.8 0.0 535 40-584 9-553 (555)
20677 10 2E4X_B Metabotropic glutamate 100.0 1.2E-43 8.6E-48 406.8 0.0 535 40-584 9-553 (555)
20678 11 6N50_A Metabotropic glutamate 100.0 4.1E-43 3E-47 405.6 0.0 536 36-576 42-589 (596)
20679 12 6N4Y_C Metabotropic glutamate 100.0 4.4E-43 3.2E-47 405.3 0.0 536 36-576 42-589 (596)
20680 13 5K5S_B Extracellular calcium-s 100.0 1.3E-42 9.6E-47 402.9 0.0 534 39-580 25-609 (615)
20681 14 5KZQ_A Metabotropic glutamate 100.0 1.7E-42 1.2E-46 398.2 0.0 529 38-580 24-564 (570)
20682 15 5K5T_A Extracellular calcium-s 100.0 2.4E-42 1.8E-46 400.9 0.0 534 39-580 25-609 (615)
20683 16 6FFH_A Metabotropic glutamate 100.0 9.6E-38 6.9E-42 309.0 0.0 266 573-852 4-431 (444)
20684 17 6FFI_A Metabotropic glutamate 100.0 9.6E-38 6.9E-42 309.0 0.0 266 573-852 4-431 (444)
20685 18 4OR2_B Chimera of Soluble cyto 100.0 1.8E-37 1.3E-41 330.2 0.0 271 570-854 108-380 (389)
20686 19 6BT5_B Metabotropic glutamate 99.9 2.3E-27 1.7E-31 265.1 0.0 468 40-507 4-471 (479)
20687 20 6BSZ_A Metabotropic glutamate 99.9 3.3E-27 2.4E-31 263.8 0.0 468 40-507 4-471 (479)
20688 21 3KS9_B Metabotropic glutamate 99.8 1.4E-26 1E-30 259.8 0.0 465 37-506 9-489 (496)
20689 22 4XAR_A Metabotropic glutamate 99.8 1.6E-26 1.2E-30 260.6 0.0 462 37-506 32-503 (517)
20690 23 6B7H_A Metabotropic glutamate 99.8 1.6E-26 1.2E-30 260.6 0.0 462 37-506 32-503 (517)
20691 24 1EWK_B METABOTROPIC GLUTAMATE 99.8 1.8E-26 1.3E-30 258.4 0.0 464 38-506 5-484 (490)
20692 25 1EWT_A METABOTROPIC GLUTAMATE 99.8 1.8E-26 1.3E-30 258.4 0.0 464 38-506 5-484 (490)
20693 26 5C5C_A Metabotropic glutamate 99.8 2E-26 1.4E-30 257.7 0.0 468 38-505 9-480 (481)
20694 27 3SM9_A Metabotropic glutamate 99.8 2.4E-26 1.7E-30 256.8 0.0 459 40-506 8-476 (479)
20695 28 4XAQ_A Metabotropic glutamate 99.8 9.3E-26 6.8E-30 253.4 0.0 453 40-506 28-491 (503)
20696 29 5CNI_A Metabotropic glutamate 99.8 9.3E-26 6.8E-30 253.4 0.0 453 40-506 28-491 (503)
20697 30 5CNJ_A Metabotropic glutamate 99.8 1.1E-25 7.8E-30 252.8 0.0 454 39-506 27-491 (503)
20698 31 5FBK_A Extracellular calcium-s 99.8 3.8E-25 2.8E-29 252.0 0.0 460 40-507 53-560 (568)
20699 32 5FBK_B Extracellular calcium-s 99.8 4.7E-25 3.4E-29 251.3 0.0 460 40-507 53-560 (568)
20700 33 1DP4_A ATRIAL NATRIURETIC PEPT 99.8 2.8E-24 2E-28 236.6 0.0 369 44-494 1-397 (435)
20701 34 1DP4_C ATRIAL NATRIURETIC PEPT 99.8 2.8E-24 2E-28 236.6 0.0 369 44-494 1-397 (435)
20702 35 5X2M_A Taste receptor, type 1, 99.8 4.3E-24 3.1E-28 237.0 0.0 419 35-494 4-432 (461)
20703 36 5X2N_C Taste receptor, type 1, 99.8 4.3E-24 3.1E-28 237.0 0.0 419 35-494 4-432 (461)
20704 37 5X2M_B Taste receptor, type 1, 99.8 1.5E-23 1.1E-27 233.8 0.0 440 39-512 12-470 (478)
20705 38 5X2N_B Taste receptor, type 1, 99.8 1.5E-23 1.1E-27 233.8 0.0 440 39-512 12-470 (478)
20706 39 5X2N_D Taste receptor, type 1, 99.8 1.5E-23 1.1E-27 233.8 0.0 440 39-512 12-470 (478)
20707 40 1JDN_A ATRIAL NATRIURETIC PEPT 99.8 2E-23 1.4E-27 230.1 0.0 372 41-494 5-395 (441)
20708 41 1JDP_A ATRIAL NATRIURETIC PEPT 99.8 2E-23 1.4E-27 230.1 0.0 372 41-494 5-395 (441)
20709 42 4F11_A Gamma-aminobutyric acid 99.7 2E-22 1.4E-26 221.5 0.0 391 39-506 8-419 (433)
20710 43 4MS4_B Gamma-aminobutyric acid 99.7 2E-22 1.4E-26 221.5 0.0 391 39-506 8-419 (433)
20711 44 4MQE_A Gamma-aminobutyric acid 99.7 2E-21 1.4E-25 212.4 0.0 376 43-494 3-392 (420)
20712 45 4MS4_A Gamma-aminobutyric acid 99.7 2E-21 1.4E-25 212.4 0.0 376 43-494 3-392 (420)
20713 46 3Q41_C Glutamate [NMDA] recept 99.7 4.8E-21 3.4E-25 206.5 0.0 348 42-507 3-364 (384)
20714 47 5KC8_A Glutamate receptor iono 99.6 9.9E-21 7.1E-25 207.4 0.0 378 42-495 3-403 (429)
20715 48 3OM0_A Glutamate receptor, ion 99.6 2.1E-20 1.5E-24 201.9 0.0 370 43-495 2-376 (393)
20716 49 3QLU_B Glutamate receptor, ion 99.6 2.1E-20 1.5E-24 201.9 0.0 370 43-495 2-376 (393)
20717 50 5FWY_B GLUTAMATE RECEPTOR 2, G 99.6 2.4E-20 1.7E-24 201.4 0.0 372 43-505 3-385 (390)
20718 51 6FPJ_A Glutamate receptor 3; l 99.6 2.4E-20 1.7E-24 201.4 0.0 372 43-505 3-385 (390)
20719 52 3H5L_A putative Branched-chain 99.6 2.8E-20 2.1E-24 203.0 0.0 363 40-493 9-385 (419)
20720 53 3H5L_B putative Branched-chain 99.6 2.8E-20 2.1E-24 203.0 0.0 363 40-493 9-385 (419)
20721 54 5KCA_A Cerebellin-1,Cerebellin 99.6 4.6E-20 3.3E-24 221.1 0.0 382 40-496 452-855 (878)
20722 55 4XFK_A BrovA.17370.a; transpor 99.6 5.4E-20 3.9E-24 199.1 0.0 355 43-493 9-374 (399)
20723 56 5KC9_A Glutamate receptor iono 99.6 5.6E-20 4.1E-24 201.2 0.0 372 42-495 3-402 (428)
20724 57 6JFY_A Glutamate receptor iono 99.6 1.1E-19 7.8E-24 216.7 0.0 373 43-494 2-380 (809)
20725 58 4GPA_A Glutamate receptor 4; P 99.6 1.1E-19 7.9E-24 196.1 0.0 361 43-496 3-374 (389)
20726 59 5EWM_A NMDA glutamate receptor 99.6 1.2E-19 8.4E-24 195.9 0.0 351 43-507 2-383 (390)
20727 60 3H6G_A Glutamate receptor, ion 99.6 1.2E-19 8.7E-24 196.1 0.0 373 43-495 2-378 (395)
20728 61 3H6G_B Glutamate receptor, ion 99.6 1.2E-19 8.7E-24 196.1 0.0 373 43-495 2-378 (395)
20729 62 6JFY_B Glutamate receptor iono 99.6 1.2E-19 8.9E-24 216.1 0.0 373 43-494 2-380 (809)
20730 63 5L2E_B Cerebellin-1; Synapse P 99.6 1.3E-19 9.3E-24 211.8 0.0 379 42-495 2-402 (688)
20731 64 3QEK_B NMDA glutamate receptor 99.6 1.3E-19 9.4E-24 195.1 0.0 349 43-505 3-382 (384)
20732 65 6LU9_D Glutamate receptor iono 99.6 1.3E-19 9.6E-24 218.0 0.0 374 44-494 2-399 (877)
20733 66 1USG_A LEUCINE-SPECIFIC BINDIN 99.6 2.1E-19 1.5E-23 190.1 0.0 335 44-477 1-337 (346)
20734 67 3IP6_A ABC transporter, substr 99.6 2.6E-19 1.9E-23 190.4 0.0 349 44-493 1-351 (356)
20735 68 3IPC_A ABC transporter, substr 99.6 2.7E-19 2E-23 190.1 0.0 348 45-493 2-351 (356)
20736 69 4EYG_B Twin-arginine transloca 99.5 3.1E-19 2.3E-23 190.7 0.0 356 42-494 3-360 (368)
20737 70 4EYK_A Twin-arginine transloca 99.5 3.1E-19 2.3E-23 190.7 0.0 356 42-494 3-360 (368)
20738 71 3HUT_A putative branched-chain 99.5 4E-19 2.9E-23 189.0 0.0 350 43-493 2-353 (358)
20739 72 5KUH_C Glutamate receptor iono 99.5 4.1E-19 3E-23 210.0 0.0 372 43-495 2-378 (757)
20740 73 4EVQ_A Putative ABC transporte 99.5 4.1E-19 3E-23 190.4 0.0 352 39-491 10-361 (375)
20741 74 4EVQ_B Putative ABC transporte 99.5 4.1E-19 3E-23 190.4 0.0 352 39-491 10-361 (375)
20742 75 4N0Q_B Leu/Ile/Val-binding pro 99.5 4.2E-19 3E-23 188.6 0.0 336 43-477 8-346 (354)
20743 76 4N0Q_C Leu/Ile/Val-binding pro 99.5 4.2E-19 3E-23 188.6 0.0 336 43-477 8-346 (354)
20744 77 3SAJ_C Glutamate receptor 1; R 99.5 4.5E-19 3.3E-23 190.7 0.0 357 41-495 6-372 (384)
20745 78 6E7R_B Glutamate receptor iono 99.5 6E-19 4.4E-23 188.1 0.0 348 44-505 2-361 (363)
20746 79 6E7S_D Glutamate receptor iono 99.5 6E-19 4.4E-23 188.1 0.0 348 44-505 2-361 (363)
20747 80 3HSY_B Glutamate receptor 2; G 99.5 6.1E-19 4.5E-23 188.9 0.0 357 44-495 1-369 (376)
20748 81 3SAJ_B Glutamate receptor 1; R 99.5 6.5E-19 4.7E-23 189.5 0.0 357 41-495 6-372 (384)
20749 82 3N6V_D Glutamate receptor 2; A 99.5 6.9E-19 5E-23 188.4 0.0 355 46-495 1-367 (374)
20750 83 4GNR_A ABC transporter substra 99.5 7E-19 5.1E-23 186.7 0.0 347 41-492 3-352 (353)
20751 84 3N0X_A Possible substrate bind 99.5 7.4E-19 5.3E-23 188.3 0.0 348 43-494 2-355 (374)
20752 85 6KSP_B Glutamate receptor iono 99.5 7.5E-19 5.4E-23 210.7 0.0 372 44-494 2-398 (856)
20753 86 3N6V_B Glutamate receptor 2; A 99.5 8.3E-19 6E-23 187.8 0.0 355 46-495 1-367 (374)
20754 87 1Z17_A Leu/Ile/Val-binding pro 99.5 8.4E-19 6.1E-23 185.2 0.0 333 45-478 2-336 (344)
20755 88 4RU0_B Putative branched-chain 99.5 1E-18 7.4E-23 192.3 0.0 370 40-494 28-416 (447)
20756 89 5EWM_D NMDA glutamate receptor 99.5 1E-18 7.5E-23 186.3 0.0 349 43-505 2-362 (364)
20757 90 4MLC_A Extracellular ligand-bi 99.5 1.1E-18 7.8E-23 185.4 0.0 346 40-489 5-355 (356)
20758 91 4Q6B_A Extracellular ligand-bi 99.5 1.1E-18 7.8E-23 185.4 0.0 346 40-489 5-355 (356)
20759 92 3TD9_A Branched chain amino ac 99.5 1.1E-18 8.1E-23 186.2 0.0 347 43-494 14-363 (366)
20760 93 3N0W_B ABC branched chain amin 99.5 1.7E-18 1.2E-22 185.8 0.0 350 42-493 3-354 (379)
20761 94 1PEA_A AMIDASE OPERON, ACETAMI 99.5 1.8E-18 1.3E-22 186.1 0.0 354 42-493 4-359 (385)
20762 95 1QO0_B AMIC, AMIR; BINDING PRO 99.5 1.8E-18 1.3E-22 186.1 0.0 354 42-493 4-359 (385)
20763 96 4KV7_A Probable leucine/isoleu 99.5 1.9E-18 1.4E-22 185.5 0.0 349 38-477 10-366 (381)
20764 97 4OBB_B Amino acid/amide ABC tr 99.5 2E-18 1.5E-22 186.4 0.0 362 39-492 27-392 (395)
20765 98 4RV5_B Amino acid/amide ABC tr 99.5 2E-18 1.5E-22 186.4 0.0 362 39-492 27-392 (395)
20766 99 3I45_A Twin-arginine transloca 99.5 2.3E-18 1.6E-22 185.4 0.0 355 43-494 3-360 (387)
20767 100 4F06_A Extracellular ligand-bi 99.5 2.9E-18 2.1E-22 183.2 0.0 356 42-492 2-361 (371)
20768 101 4N03_A ABC-type branched-chain 99.5 4.8E-18 3.5E-22 184.1 0.0 356 40-494 28-392 (405)
20769 102 4M88_A Extracellular ligand-bi 99.5 4.9E-18 3.5E-22 180.4 0.0 343 43-477 2-350 (357)
20770 103 3I09_B Periplasmic branched-ch 99.5 6.2E-18 4.5E-22 181.0 0.0 347 43-492 2-349 (375)
20771 104 5TQ0_B NMDA glutamate receptor 99.4 6.5E-18 4.7E-22 179.7 0.0 343 46-505 1-358 (360)
20772 105 5TPW_B NMDA glutamate receptor 99.4 6.5E-18 4.7E-22 179.7 0.0 343 46-505 1-358 (360)
20773 106 4MAA_A Putative branched-chain 99.4 9.1E-18 6.6E-22 181.7 0.0 352 40-494 29-383 (403)
20774 107 5L1B_D Glutamate receptor 2; T 99.4 1.1E-17 8.2E-22 198.8 0.0 356 44-494 1-368 (803)
20775 108 4TLL_D GluN1/GluN2B; Neurotran 99.4 1.3E-17 9.1E-22 199.0 0.0 340 40-494 5-358 (824)
20776 109 4TLM_D GluN1/GluN2B; neurotran 99.4 1.3E-17 9.1E-22 199.0 0.0 340 40-494 5-358 (824)
20777 110 4EYQ_A Extracellular ligand-bi 99.4 1.8E-17 1.3E-21 176.2 0.0 348 41-477 3-354 (362)
20778 111 3LKB_B Probable branched-chain 99.4 1.9E-17 1.4E-21 178.4 0.0 360 42-494 4-375 (392)
20779 112 4F8J_A Putative branched-chain 99.4 2.8E-17 2E-21 174.7 0.0 348 41-477 3-354 (362)
20780 113 4U4G_D GluA2*; Ionotropic glut 99.4 2.9E-17 2.1E-21 195.8 0.0 356 44-494 1-368 (822)
20781 114 6PEQ_D Glutamate receptor 2, P 99.4 3.4E-17 2.4E-21 196.9 0.0 360 40-494 21-392 (889)
20782 115 3UK0_A Extracellular ligand-bi 99.4 3.5E-17 2.6E-21 173.9 0.0 348 41-477 3-354 (362)
20783 116 4TLL_C GluN1/GluN2B; Neurotran 99.4 3.6E-17 2.6E-21 194.8 0.0 349 43-507 3-363 (823)
20784 117 4TLM_C GluN1/GluN2B; neurotran 99.4 3.6E-17 2.6E-21 194.8 0.0 349 43-507 3-363 (823)
20785 118 4MPT_B Putative leu/ile/val-bi 99.4 3.6E-17 2.6E-21 175.3 0.0 354 42-477 3-367 (380)
20786 119 4ZPJ_A Extracellular ligand-bi 99.4 5.1E-17 3.7E-21 177.0 0.0 346 39-476 48-399 (423)
20787 120 6DLZ_B Glutamate receptor 2,Vo 99.4 5.2E-17 3.7E-21 198.5 0.0 356 44-494 1-368 (1031)
20788 121 3EAF_A ABC transporter, substr 99.4 6.6E-17 4.8E-21 174.0 0.0 362 43-494 2-372 (391)
20789 122 5UOW_C N-methyl-D-aspartate re 99.4 6.8E-17 4.9E-21 192.2 0.0 336 43-494 2-348 (814)
20790 123 3LOP_A Substrate binding perip 99.4 7.1E-17 5.1E-21 171.9 0.0 352 43-492 3-360 (364)
20791 124 5IOV_B GluN1, GLY-GLY-GLU-GLU; 99.4 7.4E-17 5.4E-21 192.2 0.0 341 39-494 23-377 (825)
20792 125 5WEO_A Glutamate receptor 2,Vo 99.3 1.3E-16 9.5E-21 195.0 0.0 356 44-494 1-368 (1034)
20793 126 4DQD_A Extracellular ligand-bi 99.3 1.9E-16 1.4E-20 168.3 0.0 348 43-477 2-355 (363)
20794 127 3SG0_A Extracellular ligand-bi 99.3 3.9E-16 2.8E-20 167.4 0.0 350 41-477 23-378 (386)
20795 128 5ERE_A Extracellular ligand-bi 99.3 4.6E-16 3.3E-20 176.6 0.0 327 45-494 1-327 (568)
20796 129 3CKM_A Uncharacterized protein 99.2 3.7E-15 2.7E-19 155.6 0.0 322 44-493 1-324 (327)
20797 130 5VBG_A Penicillin-binding prot 98.9 1.6E-13 1.2E-17 154.3 0.0 215 40-311 219-434 (543)
20798 131 5KCN_A Penicillin-binding prot 98.9 1.6E-13 1.2E-17 154.2 0.0 215 40-311 219-434 (543)
20799 132 4PYR_A Putative branched-chain 98.9 1.7E-13 1.2E-17 141.2 0.0 204 45-311 1-205 (305)
20800 133 4YLE_A Simple sugar transport 97.8 1.5E-08 1.1E-12 103.5 0.0 224 40-308 27-256 (316)
20801 134 4RK1_B Ribose transcriptional 97.7 2.9E-08 2.1E-12 99.2 0.0 204 42-300 4-209 (280)
20802 135 4RK1_D Ribose transcriptional 97.7 2.9E-08 2.1E-12 99.2 0.0 204 42-300 4-209 (280)
20803 136 3BRQ_A HTH-type transcriptiona 97.6 3.8E-08 2.7E-12 99.3 0.0 208 41-300 15-225 (296)
20804 137 3BRQ_B HTH-type transcriptiona 97.6 3.8E-08 2.7E-12 99.3 0.0 208 41-300 15-225 (296)
20805 138 5DTE_B Monosaccharide-transpor 97.6 5.2E-08 3.8E-12 99.3 0.0 222 41-308 22-249 (311)
20806 139 3KSM_B ABC-type sugar transpor 97.6 5.5E-08 4E-12 96.9 0.0 212 46-308 1-220 (276)
20807 140 3KSM_A ABC-type sugar transpor 97.6 5.5E-08 4E-12 96.9 0.0 212 46-308 1-220 (276)
20808 141 4RSM_A Periplasmic binding pro 97.6 5.6E-08 4.1E-12 99.9 0.0 213 40-308 7-226 (327)
20809 142 6HBD_B ABC transporter peripla 97.6 5.7E-08 4.1E-12 99.4 0.0 211 39-300 11-230 (320)
20810 143 4JOQ_A ABC ribose transporter, 97.6 6.4E-08 4.6E-12 97.7 0.0 218 42-308 4-226 (297)
20811 144 4JOQ_B ABC ribose transporter, 97.6 6.4E-08 4.6E-12 97.7 0.0 218 42-308 4-226 (297)
20812 145 5HSG_A Putative ABC transporte 97.5 7E-08 5.1E-12 98.2 0.0 214 41-308 21-243 (310)
20813 146 2O20_B Catabolite control prot 97.5 8.3E-08 6E-12 98.8 0.0 203 42-300 60-264 (332)
20814 147 2O20_F Catabolite control prot 97.5 8.3E-08 6E-12 98.8 0.0 203 42-300 60-264 (332)
20815 148 4YO7_A Sugar ABC transporter ( 97.5 8.5E-08 6.2E-12 98.4 0.0 216 40-308 40-261 (326)
20816 149 6GQ0_A Putative sugar binding 97.5 9.5E-08 6.9E-12 97.6 0.0 220 35-308 20-246 (318)
20817 150 6GT9_C Putative sugar binding 97.5 9.5E-08 6.9E-12 97.6 0.0 220 35-308 20-246 (318)
20818 151 1GUB_A D-ALLOSE-BINDING PERIPL 97.5 1E-07 7.3E-12 95.6 0.0 218 45-308 1-226 (288)
20819 152 1GUD_B D-ALLOSE-BINDING PERIPL 97.5 1E-07 7.3E-12 95.6 0.0 218 45-308 1-226 (288)
20820 153 1DBQ_B PURINE REPRESSOR; TRANS 97.5 1.1E-07 7.8E-12 95.4 0.0 205 42-300 4-212 (289)
20821 154 4RK0_D LacI family sugar-bindi 97.5 1.2E-07 8.7E-12 94.2 0.0 198 42-300 4-203 (274)
20822 155 3DBI_A SUGAR-BINDING TRANSCRIP 97.4 1.3E-07 9.1E-12 97.6 0.0 207 42-300 58-267 (338)
20823 156 3DBI_C SUGAR-BINDING TRANSCRIP 97.4 1.3E-07 9.1E-12 97.6 0.0 207 42-300 58-267 (338)
20824 157 3EGC_F putative ribose operon 97.4 1.5E-07 1.1E-11 94.6 0.0 205 41-300 4-211 (291)
20825 158 4KZK_A L-arabinose-binding pro 97.4 1.6E-07 1.1E-11 96.8 0.0 218 40-308 31-265 (337)
20826 159 3O1I_C Sensor protein TorS (E. 97.4 1.6E-07 1.1E-11 95.1 0.0 216 43-308 3-226 (304)
20827 160 3O1I_D Sensor protein TorS (E. 97.4 1.6E-07 1.1E-11 95.1 0.0 216 43-308 3-226 (304)
20828 161 3O1J_C Sensor protein TorS (E. 97.4 1.6E-07 1.1E-11 95.1 0.0 216 43-308 3-226 (304)
20829 162 4YHS_A ABC TRANSPORTER SOLUTE 97.4 1.6E-07 1.1E-11 97.7 0.0 215 40-308 53-276 (354)
20830 163 3CLK_B Transcription regulator 97.4 1.6E-07 1.2E-11 94.3 0.0 205 41-300 4-210 (290)
20831 164 2RGY_A Transcriptional regulat 97.4 1.6E-07 1.2E-11 94.2 0.0 208 41-300 4-214 (290)
20832 165 6HB0_A ABC transporter peripla 97.4 1.8E-07 1.3E-11 95.7 0.0 211 39-300 13-232 (322)
20833 166 1SXG_D Glucose-resistance amyl 97.4 1.8E-07 1.3E-11 93.2 0.0 204 42-300 5-212 (280)
20834 167 2NZV_G Catabolite control prot 97.4 1.8E-07 1.3E-11 93.2 0.0 204 42-300 5-212 (280)
20835 168 4RS3_A ABC transporter, carboh 97.4 1.9E-07 1.4E-11 95.7 0.0 213 40-308 7-226 (327)
20836 169 5OCP_A Periplasmic binding pro 97.4 2E-07 1.5E-11 94.3 0.0 203 47-300 2-212 (302)
20837 170 3BIL_A Probable LacI-family tr 97.4 2.1E-07 1.5E-11 96.4 0.0 202 42-300 63-266 (348)
20838 171 3O74_A Fructose transport syst 97.3 2.3E-07 1.6E-11 91.9 0.0 200 45-300 2-205 (272)
20839 172 3O74_B Fructose transport syst 97.3 2.3E-07 1.6E-11 91.9 0.0 200 45-300 2-205 (272)
20840 173 4Z0N_A Periplasmic Solute Bind 97.3 2.3E-07 1.7E-11 95.6 0.0 222 40-309 26-265 (337)
20841 174 4PE6_B solute binding protein; 97.3 2.3E-07 1.7E-11 95.8 0.0 210 40-299 13-228 (341)
20842 175 2X7X_A SENSOR PROTEIN (E.C.2.7 97.3 2.4E-07 1.7E-11 95.0 0.0 213 42-308 3-221 (325)
20843 176 2X7X_B SENSOR PROTEIN (E.C.2.7 97.3 2.4E-07 1.7E-11 95.0 0.0 213 42-308 3-221 (325)
20844 177 4RXM_A Possible sugar ABC supe 97.3 2.4E-07 1.8E-11 92.9 0.0 205 43-300 2-213 (292)
20845 178 2HSG_A Glucose-resistance amyl 97.3 2.5E-07 1.8E-11 95.1 0.0 204 42-300 57-264 (332)
20846 179 1ZHH_A Autoinducer 2-binding p 97.3 2.5E-07 1.8E-11 95.7 0.0 220 42-308 42-268 (344)
20847 180 5ULB_A Putative sugar ABC tran 97.3 2.6E-07 1.9E-11 95.1 0.0 217 38-308 12-237 (337)
20848 181 2FEP_A Catabolite control prot 97.3 2.7E-07 1.9E-11 92.6 0.0 206 40-300 11-220 (289)
20849 182 2IKS_A DNA-binding transcripti 97.3 2.7E-07 2E-11 92.6 0.0 204 41-300 16-222 (293)
20850 183 3D8U_A PurR transcriptional re 97.3 2.7E-07 2E-11 91.5 0.0 202 44-300 2-206 (275)
20851 184 3D8U_B PurR transcriptional re 97.3 2.7E-07 2E-11 91.5 0.0 202 44-300 2-206 (275)
20852 185 1JHZ_B PURINE NUCLEOTIDE SYNTH 97.3 2.7E-07 2E-11 92.4 0.0 206 41-300 3-212 (289)
20853 186 2P9H_A Lactose operon represso 97.3 2.8E-07 2.1E-11 91.0 0.0 199 46-300 1-202 (269)
20854 187 2PAF_B Lactose operon represso 97.3 2.8E-07 2.1E-11 91.0 0.0 199 46-300 1-202 (269)
20855 188 3K4H_A putative transcriptiona 97.3 2.9E-07 2.1E-11 92.4 0.0 210 42-300 5-217 (292)
20856 189 4RXT_A Sugar ABC transporter; 97.3 3E-07 2.1E-11 92.8 0.0 213 43-308 2-226 (299)
20857 190 4ZJP_A solute binding protein; 97.3 3E-07 2.2E-11 92.3 0.0 206 38-299 17-229 (292)
20858 191 2VK2_A ABC TRANSPORTER PERIPLA 97.3 3.2E-07 2.3E-11 92.9 0.0 205 45-300 2-216 (306)
20859 192 1JFT_A PURINE NUCLEOTIDE SYNTH 97.3 3.2E-07 2.3E-11 94.5 0.0 206 41-300 54-263 (340)
20860 193 3BRS_B Periplasmic binding pro 97.3 3.3E-07 2.4E-11 91.8 0.0 215 43-308 3-223 (289)
20861 194 4RK4_A Transcriptional regulat 97.3 3.4E-07 2.4E-11 91.3 0.0 205 41-300 5-216 (283)
20862 195 4RK5_A Transcriptional regulat 97.3 3.4E-07 2.4E-11 91.3 0.0 205 41-300 5-216 (283)
20863 196 2QU7_B Putative transcriptiona 97.3 3.6E-07 2.6E-11 91.5 0.0 200 42-300 5-212 (288)
20864 197 4IRX_B Sugar ABC transporter, 97.3 3.7E-07 2.7E-11 91.8 0.0 208 41-300 4-219 (296)
20865 198 4RY9_A Periplasmic binding pro 97.2 3.9E-07 2.8E-11 91.9 0.0 205 42-300 4-223 (302)
20866 199 3G1W_A Sugar ABC transporter; 97.2 4E-07 2.9E-11 92.1 0.0 213 43-308 2-220 (305)
20867 200 3G1W_B Sugar ABC transporter; 97.2 4E-07 2.9E-11 92.1 0.0 213 43-308 2-220 (305)
20868 201 5XSD_B Periplasmic binding pro 97.2 4.3E-07 3.1E-11 91.9 0.0 217 40-309 13-235 (306)
20869 202 5DKV_A ABC transporter substra 97.2 4.3E-07 3.1E-11 92.8 0.0 219 42-308 24-253 (324)
20870 203 1ZVV_B Glucose-resistance amyl 97.2 4.3E-07 3.2E-11 93.1 0.0 204 42-300 57-264 (332)
20871 204 4KQ9_A Ribose ABC transporter, 97.2 4.6E-07 3.3E-11 91.2 0.0 205 42-299 4-214 (299)
20872 205 5XSS_A Periplasmic binding pro 97.2 4.8E-07 3.5E-11 92.1 0.0 217 39-308 22-244 (316)
20873 206 4YR7_A LuxP; PROTEIN-LIGAND CO 97.2 5.1E-07 3.7E-11 93.2 0.0 222 42-308 43-269 (345)
20874 207 2IOY_A Periplasmic sugar-bindi 97.2 5.3E-07 3.8E-11 90.0 0.0 208 46-308 2-215 (283)
20875 208 1TLF_C TRYPTIC CORE FRAGMENT O 97.2 5.3E-07 3.8E-11 91.0 0.0 200 45-300 2-204 (301)
20876 209 3OQO_C Catabolite control prot 97.2 5.3E-07 3.8E-11 92.8 0.0 204 42-300 57-264 (339)
20877 210 4RK6_A Glucose-resistance amyl 97.2 5.4E-07 3.9E-11 90.0 0.0 205 40-300 5-214 (287)
20878 211 4RK7_B Glucose-resistance amyl 97.2 5.4E-07 3.9E-11 90.0 0.0 205 40-300 5-214 (287)
20879 212 4RWE_A Sugar-binding transport 97.2 6E-07 4.3E-11 90.0 0.0 213 43-308 3-220 (292)
20880 213 3GV0_A Transcriptional regulat 97.2 6.1E-07 4.4E-11 89.8 0.0 207 41-300 4-213 (288)
20881 214 5HKO_A ABC transporter, carboh 97.2 6.3E-07 4.6E-11 92.7 0.0 214 40-309 28-248 (348)
20882 215 4RXU_A Periplasmic sugar-bindi 97.2 6.5E-07 4.7E-11 93.4 0.0 153 39-241 24-182 (367)
20883 216 4KMR_A Transcriptional regulat 97.1 6.7E-07 4.9E-11 88.9 0.0 201 44-300 2-208 (280)
20884 217 3L6U_A ABC-TYPE SUGAR TRANSPOR 97.1 6.8E-07 4.9E-11 89.7 0.0 205 42-300 5-220 (293)
20885 218 2DRI_A D-RIBOSE-BINDING PROTEI 97.1 6.8E-07 4.9E-11 88.2 0.0 207 46-308 2-214 (271)
20886 219 3D02_A Putative LACI-type tran 97.1 6.9E-07 5E-11 90.1 0.0 214 43-308 2-222 (303)
20887 220 4WZZ_A ABC TRANSPORTER SOLUTE 97.1 7.2E-07 5.2E-11 93.2 0.0 215 41-308 50-273 (371)
20888 221 1JX6_A LUXP PROTEIN; PROTEIN-L 97.1 7.2E-07 5.2E-11 91.9 0.0 222 42-308 40-266 (342)
20889 222 4WT7_A ABC TRANSPORTER SOLUTE 97.1 7.7E-07 5.5E-11 90.8 0.0 202 42-299 29-242 (321)
20890 223 2RJO_A Twin-arginine transloca 97.1 8.7E-07 6.3E-11 90.9 0.0 217 43-307 3-229 (332)
20891 224 4Y9T_A ABC TRANSPORTER SOLUTE 97.1 8.9E-07 6.5E-11 91.4 0.0 205 42-300 24-239 (346)
20892 225 4RU1_A Monosaccharide ABC tran 97.1 9.1E-07 6.6E-11 89.3 0.0 206 39-299 14-223 (304)
20893 226 4YV7_A ABC TRANSPORTER SOLUTE 97.1 9.4E-07 6.8E-11 90.2 0.0 215 39-309 34-255 (326)
20894 227 2FN9_B ribose ABC transporter, 97.1 1E-06 7.3E-11 88.2 0.0 202 45-299 2-215 (290)
20895 228 4XXH_B PROTEIN (TREHALOSE OPER 97.1 1E-06 7.4E-11 86.1 0.0 192 45-299 2-196 (255)
20896 229 5IX8_B Putative sugar ABC tran 97.0 1.1E-06 8.2E-11 89.4 0.0 208 40-299 10-224 (321)
20897 230 4WUT_A ABC TRANSPORTER SOLUTE 97.0 1.1E-06 8.2E-11 89.0 0.0 222 39-308 17-244 (313)
20898 231 3HCW_A Maltose operon transcri 97.0 1.2E-06 8.5E-11 88.0 0.0 207 42-299 4-216 (295)
20899 232 1JYE_A Lactose Operon Represso 97.0 1.2E-06 9E-11 90.4 0.0 203 42-300 58-263 (349)
20900 233 2PE5_B Lactose operon represso 97.0 1.3E-06 9.2E-11 89.4 0.0 203 42-300 57-262 (330)
20901 234 3C3K_B Alanine racemase (E.C.5 97.0 1.3E-06 9.5E-11 87.1 0.0 203 41-300 4-209 (285)
20902 235 8ABP_A L-ARABINOSE-BINDING PRO 97.0 1.3E-06 9.6E-11 88.1 0.0 214 45-308 2-231 (306)
20903 236 5ABP_A L-ARABINOSE-BINDING PRO 97.0 1.3E-06 9.7E-11 88.1 0.0 214 45-308 2-231 (306)
20904 237 4KVF_A Rhamnose ABC transporte 97.0 1.5E-06 1.1E-10 89.5 0.0 217 39-307 33-257 (342)
20905 238 3EDC_D Lactose operon represso 97.0 1.5E-06 1.1E-10 90.2 0.0 204 41-300 57-263 (360)
20906 239 3KJX_D Transcriptional regulat 97.0 1.6E-06 1.1E-10 89.4 0.0 204 42-300 65-272 (344)
20907 240 3KJX_C Transcriptional regulat 97.0 1.6E-06 1.1E-10 89.4 0.0 204 42-300 65-272 (344)
20908 241 1GLG_A GALACTOSE/GLUCOSE-BINDI 97.0 1.6E-06 1.1E-10 87.7 0.0 217 45-309 2-236 (309)
20909 242 2FVY_A D-galactose-binding per 97.0 1.6E-06 1.1E-10 87.7 0.0 217 45-309 2-236 (309)
20910 243 3M9W_A D-xylose-binding peripl 97.0 1.6E-06 1.2E-10 87.9 0.0 211 45-308 2-221 (313)
20911 244 3MA0_A D-xylose-binding peripl 97.0 1.6E-06 1.2E-10 87.9 0.0 211 45-308 2-221 (313)
20912 245 3MA0_C D-xylose-binding peripl 97.0 1.6E-06 1.2E-10 87.9 0.0 211 45-308 2-221 (313)
20913 246 5IBQ_A Probable ribose ABC tra 97.0 1.6E-06 1.2E-10 87.8 0.0 217 38-308 17-239 (310)
20914 247 3K9C_B Transcriptional regulat 97.0 1.7E-06 1.2E-10 86.5 0.0 201 41-300 8-210 (289)
20915 248 4RY8_B Periplasmic binding pro 97.0 1.7E-06 1.3E-10 88.4 0.0 215 40-308 10-230 (329)
20916 249 4RY8_C Periplasmic binding pro 97.0 1.7E-06 1.3E-10 88.4 0.0 215 40-308 10-230 (329)
20917 250 3ROT_A ABC sugar transporter, 96.9 1.9E-06 1.4E-10 86.6 0.0 205 44-299 2-212 (297)
20918 251 3ROT_B ABC sugar transporter, 96.9 1.9E-06 1.4E-10 86.6 0.0 205 44-299 2-212 (297)
20919 252 5BRA_A Putative periplasmic bi 96.9 1.9E-06 1.4E-10 89.0 0.0 220 37-308 36-262 (350)
20920 253 2H3H_A Sugar ABC transporter, 96.9 1.9E-06 1.4E-10 87.3 0.0 209 45-308 1-215 (313)
20921 254 2H3H_B Sugar ABC transporter, 96.9 1.9E-06 1.4E-10 87.3 0.0 209 45-308 1-215 (313)
20922 255 3GBV_A Putative LacI-family tr 96.9 1.9E-06 1.4E-10 86.8 0.0 155 42-242 5-168 (304)
20923 256 3HUU_A Transcription regulator 96.9 2.3E-06 1.7E-10 86.2 0.0 205 41-299 18-226 (305)
20924 257 3HUU_C Transcription regulator 96.9 2.3E-06 1.7E-10 86.2 0.0 205 41-299 18-226 (305)
20925 258 3KKE_C LacI family Transcripti 96.9 2.5E-06 1.8E-10 85.9 0.0 205 40-300 10-222 (303)
20926 259 3KKE_B LacI family Transcripti 96.9 2.5E-06 1.8E-10 85.9 0.0 205 40-300 10-222 (303)
20927 260 3BBL_A Regulatory protein of L 96.9 2.6E-06 1.9E-10 84.9 0.0 146 145-300 63-213 (287)
20928 261 4PZ0_A sugar ABC transporter, 96.9 2.8E-06 2E-10 86.6 0.0 213 41-307 6-227 (324)
20929 262 4YS6_A ABC TRANSPORTER SOLUTE 96.8 2.8E-06 2E-10 88.1 0.0 217 40-307 31-270 (360)
20930 263 3L49_C ABC sugar (Ribose) tran 96.8 2.9E-06 2.1E-10 84.7 0.0 203 43-299 3-215 (291)
20931 264 3JY6_A Transcriptional regulat 96.8 3E-06 2.1E-10 84.0 0.0 199 42-300 4-206 (276)
20932 265 3JY6_D Transcriptional regulat 96.8 3E-06 2.1E-10 84.0 0.0 199 42-300 4-206 (276)
20933 266 5HQJ_A Periplasmic binding pro 96.8 3E-06 2.2E-10 85.7 0.0 204 40-297 23-232 (311)
20934 267 3EJW_A SmLsrB; Periplasmic bin 96.8 3.3E-06 2.4E-10 85.6 0.0 211 45-308 1-220 (315)
20935 268 3QK7_C Transcriptional regulat 96.8 3.3E-06 2.4E-10 84.5 0.0 207 42-300 3-212 (294)
20936 269 3E3M_D Transcriptional regulat 96.8 3.3E-06 2.4E-10 87.3 0.0 204 42-300 67-275 (355)
20937 270 2WRZ_A L-ARABINOSE-BINDING PER 96.8 3.5E-06 2.5E-10 84.9 0.0 206 45-300 2-222 (306)
20938 271 5BQ3_A Rhamnose ABC transporte 96.8 3.7E-06 2.7E-10 85.9 0.0 218 39-308 21-248 (332)
20939 272 4RY0_A Probable ribose ABC tra 96.8 3.9E-06 2.8E-10 83.6 0.0 211 44-308 2-218 (289)
20940 273 3TB6_A Arabinose metabolism tr 96.7 4.4E-06 3.2E-10 83.7 0.0 206 41-300 11-226 (298)
20941 274 3GYB_A Transcriptional regulat 96.7 5.4E-06 3.9E-10 82.2 0.0 198 43-300 3-201 (280)
20942 275 3GYB_B Transcriptional regulat 96.7 5.4E-06 3.9E-10 82.2 0.0 198 43-300 3-201 (280)
20943 276 5UFH_A LacI-type transcription 96.7 5.9E-06 4.3E-10 85.0 0.0 202 43-300 63-278 (347)
20944 277 3CTP_A Periplasmic binding pro 96.7 6E-06 4.3E-10 84.3 0.0 198 42-300 57-256 (330)
20945 278 3G85_A Transcriptional regulat 96.7 6E-06 4.3E-10 82.3 0.0 204 41-300 7-213 (289)
20946 279 3H5O_B Transcriptional regulat 96.7 6.1E-06 4.4E-10 84.6 0.0 203 42-300 59-264 (339)
20947 280 5YSZ_A Transcriptional regulat 96.6 7.5E-06 5.4E-10 84.8 0.0 148 145-300 143-293 (360)
20948 281 3MIZ_A Putative transcriptiona 96.6 8.6E-06 6.2E-10 81.7 0.0 206 41-300 9-222 (301)
20949 282 1TJY_A sugar transport protein 96.6 9.4E-06 6.8E-10 82.2 0.0 210 44-308 2-221 (316)
20950 283 4O5A_A LacI family transcripti 96.5 9.7E-06 7E-10 83.2 0.0 207 42-300 65-274 (345)
20951 284 3UUG_B Multiple sugar-binding 96.5 1.2E-05 8.5E-10 82.0 0.0 206 44-300 2-229 (330)
20952 285 3LKV_A uncharacterized CONSERV 96.5 1.3E-05 9.7E-10 80.1 0.0 215 41-308 4-226 (302)
20953 286 4KQC_A Periplasmic binding pro 96.4 1.8E-05 1.3E-09 80.1 0.0 209 43-299 2-229 (319)
20954 287 4WWH_A ABC TRANSPORTER SOLUTE 96.4 1.8E-05 1.3E-09 81.9 0.0 210 40-300 30-261 (362)
20955 288 3CS3_A Sugar-binding transcrip 96.4 1.8E-05 1.3E-09 78.0 0.0 194 42-300 5-202 (277)
20956 289 2H0A_A Transcriptional regulat 96.3 2.4E-05 1.7E-09 77.0 0.0 144 145-300 54-205 (276)
20957 290 3E61_B Putative transcriptiona 96.3 2.5E-05 1.8E-09 77.0 0.0 197 41-300 4-202 (277)
20958 291 3E61_A Putative transcriptiona 96.3 2.5E-05 1.8E-09 77.0 0.0 197 41-300 4-202 (277)
20959 292 6HNI_A ABC-type transport syst 96.2 3.4E-05 2.4E-09 77.9 0.0 218 39-307 17-240 (319)
20960 293 6HNJ_A ABC-type transport syst 96.2 3.4E-05 2.4E-09 77.9 0.0 218 39-307 17-240 (319)
20961 294 3H75_A Periplasmic sugar-bindi 96.2 3.8E-05 2.7E-09 78.9 0.0 212 44-300 2-230 (350)
20962 295 4RKQ_A Transcriptional regulat 96.1 4.6E-05 3.3E-09 75.8 0.0 199 40-300 10-216 (294)
20963 296 4RKQ_B Transcriptional regulat 96.1 4.6E-05 3.3E-09 75.8 0.0 199 40-300 10-216 (294)
20964 297 3LFT_A uncharacterized protein 96.0 5.4E-05 3.9E-09 75.1 0.0 202 45-298 2-209 (295)
20965 298 3LFT_B uncharacterized protein 96.0 5.4E-05 3.9E-09 75.1 0.0 202 45-298 2-209 (295)
20966 299 3HS3_B Ribose operon repressor 95.7 0.00012 8.5E-09 72.0 0.0 195 41-300 6-203 (277)
20967 300 3JVD_A Transcriptional regulat 95.7 0.00012 8.9E-09 74.1 0.0 192 43-299 62-255 (333)
20968 301 3JVD_B Transcriptional regulat 95.7 0.00012 8.9E-09 74.1 0.0 192 43-299 62-255 (333)
20969 302 3S99_A Basic membrane lipoprot 95.7 0.00014 9.8E-09 74.7 0.0 216 27-298 9-229 (356)
20970 303 6DSP_B Autoinducer 2-binding p 95.3 0.00028 2E-08 71.9 0.0 221 38-308 14-250 (347)
20971 304 2FQW_A Membrane lipoprotein tm 95.3 0.0003 2.2E-08 70.6 0.0 146 145-300 61-213 (318)
20972 305 2FQX_A Membrane lipoprotein tm 95.3 0.0003 2.2E-08 70.6 0.0 146 145-300 61-213 (318)
20973 306 2FQY_A Membrane lipoprotein tm 95.3 0.0003 2.2E-08 70.6 0.0 146 145-300 61-213 (318)
20974 307 3H5T_A Transcriptional regulat 95.0 0.00053 3.8E-08 70.4 0.0 146 145-300 127-293 (366)
20975 308 6NDI_A Hypothetical Protein CD 94.9 0.00064 4.6E-08 68.6 0.0 144 145-299 119-269 (334)
20976 309 6NDI_B Hypothetical Protein CD 94.9 0.00064 4.6E-08 68.6 0.0 144 145-299 119-269 (334)
20977 310 4IIL_A Membrane lipoprotein Tp 94.8 0.00072 5.2E-08 68.7 0.0 212 40-299 27-252 (346)
20978 311 6PI6_C Atrazine periplasmic bi 94.8 0.00074 5.3E-08 68.9 0.0 206 38-298 17-227 (355)
20979 312 6PII_A Atrazine periplasmic bi 94.8 0.00074 5.3E-08 68.9 0.0 206 38-298 17-227 (355)
20980 313 6RQG_A 46 kDa surface antigen; 94.7 0.00085 6.1E-08 69.0 0.0 92 145-241 76-195 (387)
20981 314 6RUX_C Surface antigen P46; im 94.7 0.00085 6.1E-08 69.0 0.0 92 145-241 76-195 (387)
20982 315 6S3T_T 46 kDa surface antigen, 94.7 0.00085 6.1E-08 69.0 0.0 92 145-241 76-195 (387)
20983 316 4FE4_A Xylose operon regulator 94.6 0.00092 6.7E-08 69.2 0.0 148 145-300 55-208 (392)
20984 317 4FE7_A Xylose operon regulator 94.4 0.0012 8.7E-08 68.9 0.0 205 38-300 18-228 (412)
20985 318 2HQB_A Transcriptional activat 93.5 0.0031 2.3E-07 62.0 0.0 140 145-298 62-204 (296)
20986 319 6SHU_A Basic membrane protein 93.3 0.0039 2.8E-07 63.5 0.0 205 41-298 43-252 (361)
20987 320 4P98_A Basic membrane lipoprot 91.8 0.01 7.4E-07 58.8 0.0 133 145-283 74-210 (317)
20988 321 4PEV_C solute binding protein; 90.2 0.022 1.6E-06 58.9 0.0 145 145-299 110-271 (422)
20989 322 5ER3_A Sugar ABC transporter, 89.0 0.032 2.3E-06 55.7 0.0 91 145-242 237-332 (341)
20990 323 3QI7_A Putative transcriptiona 87.1 0.055 4E-06 54.7 0.0 152 145-300 86-250 (371)
20991 324 6U1N_R Muscarinic acetylcholin 78.8 0.23 1.6E-05 52.2 0.0 34 644-677 99-133 (509)
20992 325 2Z73_A Rhodopsin; Visual pigme 72.8 0.44 3.2E-05 48.8 0.0 33 645-677 105-138 (448)
20993 326 3AYN_A Rhodopsin; transmembran 72.8 0.44 3.2E-05 48.8 0.0 33 645-677 105-138 (448)
20994 327 6P9X_R Guanine nucleotide-bind 69.6 0.58 4.2E-05 47.7 0.0 27 644-670 177-203 (427)
20995 328 5X33_A LTB4 receptor,Lysozyme, 69.1 0.61 4.4E-05 49.0 0.0 18 644-661 87-104 (523)
20996 329 5XSZ_A Lysophosphatidic acid r 67.4 0.7 5E-05 47.6 0.0 34 644-677 96-130 (477)
20997 330 4PXZ_A P2Y purinoceptor 12, So 67.2 0.71 5.1E-05 47.3 0.0 34 644-677 102-136 (466)
20998 331 6IGK_A Endothelin receptor typ 65.7 0.8 5.8E-05 47.5 0.0 34 644-677 108-142 (498)
20999 332 3ODU_A C-X-C chemokine recepto 65.5 0.8 5.8E-05 47.6 0.0 34 644-677 115-149 (502)
21000 333 5T04_A Neurotensin receptor ty 65.0 0.84 6.1E-05 47.6 0.0 16 645-660 107-122 (513)
21001 334 3ODU_B C-X-C chemokine recepto 65.0 0.84 6.1E-05 47.4 0.0 35 644-678 115-150 (502)
21002 335 3OE0_A C-X-C chemokine recepto 61.9 1 7.6E-05 46.5 0.0 34 644-677 115-149 (499)
21003 336 5T1A_A C-C chemokine receptor 60.9 1.1 8.2E-05 46.5 0.0 34 644-677 119-153 (508)
21004 337 6K41_R Guanine nucleotide-bind 60.4 1.2 8.4E-05 46.6 0.0 34 644-677 280-314 (512)
21005 338 6K42_R Guanine nucleotide-bind 60.4 1.2 8.4E-05 46.6 0.0 34 644-677 280-314 (512)
21006 339 5YC8_A Muscarinic acetylcholin 60.1 1.2 8.6E-05 44.6 0.0 18 644-661 94-111 (421)
21007 340 6N4B_R Guanine nucleotide-bind 59.8 1.2 8.8E-05 46.2 0.0 18 587-604 138-155 (495)
21008 341 3VW7_A Chimera of Proteinase-a 59.5 1.2 9E-05 45.6 0.0 34 644-677 89-123 (484)
21009 342 6GPS_A C-C chemokine receptor 59.5 1.2 9E-05 44.6 0.0 23 644-666 108-130 (429)
21010 343 6ME8_A Soluble cytochrome b562 59.0 1.3 9.3E-05 45.2 0.0 26 644-669 185-210 (460)
21011 344 6ME6_A Soluble cytochrome b562 58.3 1.3 9.7E-05 45.1 0.0 34 644-677 185-219 (460)
21012 345 4GRV_A Neurotensin receptor ty 58.1 1.4 9.8E-05 45.8 0.0 33 645-677 107-140 (510)
21013 346 6WWZ_R Guanine nucleotide-bind 57.9 1.4 0.0001 46.3 0.0 33 644-676 259-292 (529)
21014 347 5ZKC_A Muscarinic acetylcholin 57.5 1.4 0.0001 44.0 0.0 34 644-677 94-128 (421)
21015 348 5IU7_A Adenosine receptor A2a, 57.2 1.4 0.0001 44.2 0.0 17 644-660 82-98 (433)
21016 349 5NM4_A Lysozyme C (E.C.3.2.1.1 57.1 1.4 0.0001 44.2 0.0 17 644-660 82-98 (433)
21017 350 5WIU_A D(4) dopamine receptor, 56.4 1.5 0.00011 43.9 0.0 22 644-665 108-129 (422)
21018 351 5WIV_A D(4) dopamine receptor, 56.4 1.5 0.00011 43.9 0.0 22 644-665 108-129 (422)
21019 352 5NDD_A Lysozyme,Proteinase-act 56.3 1.5 0.00011 46.9 0.0 34 644-677 273-307 (619)
21020 353 4IB4_A Human 5-HT2B receptor_B 56.2 1.5 0.00011 43.9 0.0 34 644-677 99-133 (430)
21021 354 6AK3_A Prostaglandin E2 recept 55.3 1.6 0.00012 43.5 0.0 19 644-662 88-106 (418)
21022 355 6AK3_B Prostaglandin E2 recept 55.3 1.6 0.00012 43.5 0.0 19 644-662 88-106 (418)
21023 356 6M9T_A Prostaglandin E2 recept 54.9 1.7 0.00012 45.6 0.0 17 645-661 139-155 (537)
21024 357 5ZKP_A Platelet-activating fac 54.8 1.7 0.00012 44.2 0.0 34 644-677 88-122 (466)
21025 358 5ZKQ_A Platelet-activating fac 54.6 1.7 0.00012 43.7 0.0 18 644-661 88-105 (438)
21026 359 5W0P_C T4 lysozyme-human rhodo 54.4 1.7 0.00012 49.2 0.0 21 644-664 266-286 (906)
21027 360 5W0P_B T4 lysozyme-human rhodo 54.0 1.8 0.00013 49.1 0.0 23 644-666 266-288 (906)
21028 361 6OSA_R Neurotensin receptor ty 53.5 1.8 0.00013 43.5 0.0 16 645-660 158-173 (435)
21029 362 4U14_A Muscarinic acetylcholin 52.9 1.9 0.00014 43.9 0.0 22 644-665 81-102 (460)
21030 363 5TUD_A Chimera protein of 5-hy 52.5 1.9 0.00014 43.7 0.0 34 644-677 115-149 (457)
21031 364 6C1R_B C5a anaphylatoxin chemo 52.2 2 0.00014 43.1 0.0 34 644-677 191-225 (422)
21032 365 6OL9_A Muscarinic acetylcholin 52.1 2 0.00014 44.0 0.0 16 644-659 81-96 (480)
21033 366 6LI0_A G-protein coupled recep 52.1 2 0.00014 43.8 0.0 34 644-677 95-129 (468)
21034 367 4XES_A neurotensin receptor su 51.2 2.1 0.00015 44.6 0.0 33 645-677 107-140 (541)
21035 368 6C1Q_B C5a anaphylatoxin chemo 51.0 2.1 0.00015 42.9 0.0 34 644-677 191-225 (422)
21036 369 3V2Y_A Sphingosine 1-phosphate 50.5 2.2 0.00016 44.4 0.0 33 645-677 132-165 (520)
21037 370 5UIW_A C-C chemokine receptor 50.3 2.2 0.00016 42.2 0.0 19 644-662 99-117 (411)
21038 371 5OLZ_A Adenosine receptor A2a, 50.0 2.3 0.00016 42.6 0.0 16 645-660 84-99 (434)
21039 372 6P9Y_R Guanine nucleotide-bind 49.7 2.3 0.00017 43.8 0.0 30 645-674 219-248 (483)
21040 373 6MXT_A Fusion protein of Lysoz 49.3 2.4 0.00017 43.4 0.0 34 644-677 237-271 (472)
21041 374 6KUX_A alpha2A adrenergic rece 48.9 2.4 0.00017 41.7 0.0 18 644-661 83-100 (395)
21042 375 4U15_B M3-mT4L, Tiotropium; GP 48.4 2.5 0.00018 42.1 0.0 18 644-661 81-98 (418)
21043 376 3EML_A Human Adenosine A2A rec 48.3 2.5 0.00018 43.3 0.0 15 644-658 88-102 (488)
21044 377 6ORV_RP Guanine nucleotide-bin 48.2 2.5 0.00018 43.6 0.0 34 644-677 231-264 (491)
21045 378 3PBL_A D(3) dopamine receptor; 47.8 2.6 0.00019 43.1 0.0 33 645-677 109-142 (481)
21046 379 6CMO_R Soluble cytochrome b562 47.5 2.6 0.00019 42.9 0.0 34 644-677 246-280 (463)
21047 380 6B3J_R Guanine nucleotide-bind 46.4 2.8 0.0002 43.2 0.0 34 644-677 231-264 (491)
21048 381 4LDE_A Lysozyme, Beta-2 adrene 45.1 3 0.00022 42.4 0.0 33 644-676 251-284 (469)
21049 382 5WF5_A Human A2a adenosine rec 44.9 3.1 0.00022 43.0 0.0 13 645-657 105-117 (504)
21050 383 2R4R_A Beta-2 adrenergic recep 44.8 3.1 0.00022 40.1 0.0 17 644-660 102-118 (365)
21051 384 5TGZ_A Cannabinoid receptor 1, 44.8 3.1 0.00022 42.0 0.0 20 585-604 27-46 (452)
21052 385 3RZE_A Histamine H1 receptor/L 44.7 3.1 0.00022 42.0 0.0 18 644-661 77-94 (452)
21053 386 6MEO_B Envelope glycoprotein g 44.7 3.1 0.00023 39.0 0.0 18 644-661 97-114 (313)
21054 387 4ZUD_A Chimera protein of Solu 44.5 3.1 0.00023 41.1 0.0 22 644-665 192-213 (410)
21055 388 4IAR_A Chimera protein of huma 44.4 3.2 0.00023 40.9 0.0 17 644-660 89-105 (401)
21056 389 6D26_A Prostaglandin D2 recept 44.1 3.2 0.00023 42.0 0.0 33 645-677 102-135 (470)
21057 390 6D27_A Prostaglandin D2 recept 44.1 3.2 0.00023 42.0 0.0 33 645-677 102-135 (470)
21058 391 6A93_A 5-hydroxytryptamine rec 43.8 3.3 0.00024 40.2 0.0 18 644-661 78-95 (376)
21059 392 6A94_A 5-hydroxytryptamine rec 43.8 3.3 0.00024 40.2 0.0 18 644-661 78-95 (376)
21060 393 4IAQ_A 5-hydroxytryptamine rec 43.2 3.4 0.00025 40.6 0.0 18 644-661 89-106 (403)
21061 394 6KPG_R Guanine nucleotide-bind 42.9 3.5 0.00025 41.9 0.0 18 586-603 166-183 (469)
21062 395 4MQS_A Muscarinic acetylcholin 42.4 3.5 0.00026 39.4 0.0 18 644-661 109-126 (351)
21063 396 4DJH_B Kappa-type opioid recep 42.3 3.6 0.00026 41.8 0.0 19 644-662 90-108 (480)
21064 397 6OS0_A Type-1 angiotensin II r 42.3 3.6 0.00026 40.8 0.0 34 644-677 104-138 (425)
21065 398 6OS1_A Type-1 angiotensin II r 42.3 3.6 0.00026 40.8 0.0 34 644-677 104-138 (425)
21066 399 6OS2_A Type-1 angiotensin II r 42.3 3.6 0.00026 40.8 0.0 34 644-677 104-138 (425)
21067 400 4YAY_A human Angiotensin Recep 41.9 3.7 0.00027 40.6 0.0 25 644-668 192-216 (414)
21068 401 4N6H_A Soluble cytochrome b562 41.6 3.7 0.00027 40.6 0.0 34 644-677 193-227 (414)
21069 402 6AKX_B Neuropeptide Y receptor 41.4 3.8 0.00027 39.8 0.0 22 644-665 99-120 (381)
21070 403 6D9H_R Guanine nucleotide-bind 40.8 3.9 0.00028 40.0 0.0 16 645-660 132-147 (389)
21071 404 6RZ4_A Cysteinyl leukotriene r 39.9 4.1 0.0003 40.3 0.0 35 644-678 95-130 (423)
21072 405 6RZ5_B Cysteinyl leukotriene r 39.9 4.1 0.0003 40.3 0.0 35 644-678 95-130 (423)
21073 406 5TVN_A 5-hydroxytryptamine rec 39.9 4.1 0.0003 39.9 0.0 34 644-677 84-118 (402)
21074 407 5UZ7_R Guanine nucleotide-bind 39.5 4.3 0.00031 41.9 0.0 27 645-671 224-250 (501)
21075 408 6I9K_A Kumopsin1; Rhodopsin, G 39.0 4.4 0.00032 39.3 0.0 17 645-661 120-136 (380)
21076 409 4XNV_A P2Y purinoceptor 1, Rub 38.7 4.5 0.00032 40.0 0.0 33 645-677 120-153 (421)
21077 410 4XNW_C P2Y purinoceptor 1, Rub 38.7 4.5 0.00032 40.0 0.0 33 645-677 120-153 (421)
21078 411 5WB1_A Envelope protein US28,n 38.1 4.6 0.00033 40.6 0.0 34 644-677 108-142 (458)
21079 412 6LI1_A G-protein coupled recep 38.1 4.6 0.00033 40.5 0.0 34 644-677 95-129 (449)
21080 413 5UNG_B Soluble cytochrome b562 38.1 4.6 0.00033 39.7 0.0 33 644-676 189-222 (411)
21081 414 5UNF_A Soluble cytochrome b562 37.9 4.7 0.00034 39.7 0.0 25 644-668 189-213 (411)
21082 415 6J21_A Substance-P receptor (E 37.8 4.7 0.00034 40.1 0.0 34 644-677 100-134 (441)
21083 416 5ZHP_A Muscarinic acetylcholin 37.7 4.7 0.00034 39.8 0.0 17 644-660 81-97 (418)
21084 417 5NJ6_A Lysozyme,Proteinase-act 37.6 4.7 0.00034 40.1 0.0 34 644-677 91-125 (437)
21085 418 5DSG_B Muscarinic acetylcholin 37.3 4.8 0.00035 39.8 0.0 17 644-660 82-98 (422)
21086 419 4Z36_A Lysophosphatidic Acid R 37.2 4.9 0.00035 40.6 0.0 34 645-678 136-170 (459)
21087 420 6PT0_R Cannabinoid receptor 2, 37.0 4.9 0.00036 38.7 0.0 12 645-656 103-114 (369)
21088 421 6OIJ_R Guanine nucleotide-bind 36.5 5.1 0.00037 38.4 0.0 34 644-677 103-137 (363)
21089 422 4Z35_A Lysophosphatidic Acid R 36.4 5.1 0.00037 40.5 0.0 14 645-658 136-149 (464)
21090 423 6KR8_A beta 2 adrenergic recep 36.4 5.1 0.00037 37.8 0.0 34 644-677 79-113 (336)
21091 424 6IIU_A Soluble cytochrome b562 36.2 5.2 0.00037 40.6 0.0 24 585-608 136-159 (484)
21092 425 6IIV_A Soluble cytochrome b562 36.2 5.2 0.00037 40.6 0.0 24 585-608 136-159 (484)
21093 426 6E3Y_R Calcitonin gene-related 36.1 5.2 0.00038 41.0 0.0 25 644-668 218-242 (490)
21094 427 6UUN_R Guanine nucleotide-bind 36.1 5.2 0.00038 41.0 0.0 25 644-668 218-242 (490)
21095 428 6M1I_A Ribonuclease 3 (E.C.3.1 35.5 5.4 0.00039 39.5 0.0 28 644-671 184-211 (406)
21096 429 4XT1_A US28, CX3CL1, nanobody 35.4 5.4 0.00039 38.3 0.0 35 644-678 108-143 (362)
21097 430 6LW5_A N-formyl peptide recept 35.2 5.5 0.0004 39.6 0.0 18 645-662 200-217 (427)
21098 431 5VBL_B agonist peptide,Rubredo 34.9 5.6 0.00041 39.0 0.0 34 644-677 116-150 (407)
21099 432 5V54_B OB-1 fused 5-HT1b recep 34.7 5.7 0.00041 38.7 0.0 34 644-677 82-116 (395)
21100 433 5WB2_A Envelope protein US28,n 34.2 5.8 0.00042 39.8 0.0 34 644-677 107-141 (460)
21101 434 6IBB_A Succinate receptor 1, N 33.2 6.2 0.00045 37.3 0.0 34 644-677 94-128 (342)
21102 435 4GBR_A Beta-2 adrenergic recep 33.0 6.3 0.00046 36.4 0.0 17 644-660 74-90 (309)
21103 436 6NBF_R Parathyroid hormone/par 32.2 6.7 0.00048 40.0 0.0 29 646-674 253-281 (478)
21104 437 6NBH_R Parathyroid hormone/par 32.2 6.7 0.00048 40.0 0.0 29 646-674 253-281 (478)
21105 438 6LML_R Guanine nucleotide-bind 31.9 6.8 0.00049 39.1 0.0 34 645-678 195-228 (422)
21106 439 6WHC_R Guanine nucleotide-bind 31.8 6.8 0.00049 39.9 0.0 34 645-678 221-254 (477)
21107 440 6LI2_A G-protein coupled recep 31.7 6.8 0.0005 37.6 0.0 34 644-677 95-129 (372)
21108 441 4L6R_A Soluble cytochrome b562 31.2 7.1 0.00051 39.0 0.0 34 645-678 205-238 (425)
21109 442 6KUW_A Alpha-2C adrenergic rec 31.1 7.1 0.00052 39.7 0.0 17 644-660 92-108 (496)
21110 443 4WW3_A BOG; Animals, Decapodif 30.8 7.2 0.00052 36.9 0.0 17 644-660 96-112 (350)
21111 444 6J20_A Substance-P receptor,En 30.6 7.3 0.00053 38.6 0.0 34 644-677 100-134 (441)
21112 445 5YWY_A Prostaglandin E2 recept 30.6 7.3 0.00053 36.5 0.0 34 644-677 88-122 (332)
21113 446 4JKV_A Soluble cytochrome b562 30.3 7.5 0.00054 39.5 0.0 34 644-677 230-263 (475)
21114 447 4N4W_A Smoothened homolog; Hum 30.3 7.5 0.00054 39.5 0.0 34 644-677 230-263 (475)
21115 448 6FJ3_A Parathyroid hormone/par 30.2 7.5 0.00054 41.0 0.0 33 646-678 214-246 (602)
21116 449 5ZBH_A Neuropeptide Y receptor 29.8 7.7 0.00056 39.8 0.0 17 644-660 118-134 (527)
21117 450 6NIY_R Adenosine receptor A1,S 29.6 7.9 0.00057 39.3 0.0 27 645-671 216-242 (474)
21118 451 5XJM_A Type-2 angiotensin II r 29.0 8.1 0.00059 37.9 0.0 34 644-677 80-114 (422)
21119 452 6VMS_R Guanine nucleotide-bind 28.9 8.2 0.00059 38.6 0.0 16 645-660 245-260 (450)
21120 453 6PS2_A Fusion protein of Beta- 28.3 8.5 0.00062 39.4 0.0 34 644-677 126-160 (506)
21121 454 6PB0_R Corticotropin-releasing 28.3 8.6 0.00062 37.3 0.0 28 644-671 161-188 (375)
21122 455 3PDS_A Fusion protein Beta-2 a 28.1 8.7 0.00063 38.5 0.0 33 645-677 79-112 (458)
21123 456 5UEN_B Adenosine receptor A1,S 27.5 9 0.00065 37.5 0.0 16 645-660 78-93 (416)
21124 457 5ZBQ_A Neuropeptide Y Y1 recep 27.3 9.1 0.00066 39.2 0.0 20 644-663 108-127 (525)
21125 458 6RNK_A Succinate receptor 1, N 27.3 9.1 0.00066 36.0 0.0 34 644-677 94-128 (342)
21126 459 5UEN_A Adenosine receptor A1,S 27.1 9.2 0.00067 37.4 0.0 16 645-660 78-93 (416)
21127 460 6PB1_P Corticotropin-releasing 26.9 9.4 0.00068 37.3 0.0 33 644-676 179-211 (387)
21128 461 6OMM_R N-formyl peptide recept 26.6 9.6 0.0007 36.2 0.0 16 645-660 116-131 (363)
21129 462 5N2S_A Adenosine receptor A2a, 26.3 9.8 0.00071 37.6 0.0 15 645-659 184-198 (436)
21130 463 5LWE_A C-C chemokine receptor 25.1 11 0.00077 35.3 0.0 20 644-663 93-112 (331)
21131 464 5ZTY_A G protein coupled recep 24.4 11 0.00081 38.3 0.0 20 585-604 37-56 (500)
21132 465 2KSA_A Substance-P receptor, S 23.6 12 0.00086 35.5 0.0 16 645-660 102-117 (364)
21133 466 5LWE_B C-C chemokine receptor 23.4 12 0.00087 34.9 0.0 18 644-661 93-110 (331)
21134 467 5DHG_B Nociceptin receptor-Cyt 23.4 12 0.00087 36.7 0.0 34 644-677 193-227 (424)
21135 468 5DHH_B GPCR-BRIL Chimera; Noci 23.4 12 0.00087 36.7 0.0 34 644-677 193-227 (424)
21136 469 4DKL_A Mu-type opioid receptor 20.3 15 0.0011 36.5 0.0 17 644-660 85-101 (464)
21137 470 5NX2_A Glucagon-like peptide 1 20.1 16 0.0011 36.1 0.0 33 645-677 204-236 (422)
21138 471 6LN2_A Glucagon-like peptide 1 20.1 16 0.0011 36.9 0.0 35 644-678 199-233 (469)
21139
21140 No 1
21141 >6N4X_A Metabotropic glutamate receptor 5; Cell Surface Receptor, MEMBRANE PROTEIN; HET: NAG; 4.0A {Homo sapiens}
21142 Probab=100.00 E-value=2.5e-77 Score=724.04 Aligned_cols=801 Identities=44% Similarity=0.813 Sum_probs=331.4 Template_Neff=10.300
21143
21144 Q NP_000836.2 35 EYAHSIRVDGDIILGGLFPVHAKGE----RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDT 110 (908)
21145 Q Consensus 35 ~~~~~~~~~~~i~Ig~l~p~~~~~~----~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~ 110 (908)
21146 ........+++++||+++|.++... ....|+......+....+|+++|++++|+++++++|+++++.+.|+++++.
21147 T Consensus 30 ~~~~~~~~~~~i~Ig~l~p~~~~~~~~~~~~~~C~~~~~~~g~~~~~a~~~Av~~iN~~~~~lp~~~l~~~i~Dt~~~~~ 109 (877)
21148 T 6N4X_A 30 ERRVVAHMPGDIIIGALFSVHHQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDPTLLPNITLGCEIRDSCWHSA 109 (877)
21149 T ss_dssp CCCCCEEECCSEEEEEEECCBCCCCSGGGTTTCCCSBCCCCCCCHHHHHHHHHHHHHHCSSSSTTCCEEEEEEECTTSHH
21150 T ss_pred CceEEEEeCCCEEEEEEEecccCCCcccccccCccchhhccCHHHHHHHHHHHHHHhcCCCCCCCCeeeeEEecCCCCHH
21151 Confidence 3444567889999999999987421 124566444445677899999999999998888889999999999998866
21152
21153
21154 Q NP_000836.2 111 YALEQSLTFVQALIEK---DASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNT 187 (908)
21155 Q Consensus 111 ~a~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~ 187 (908)
21156 .+.+.+.+++.+.... ......|...++.+....+++++++|+.++..+..++.++...++|++++.++++.++++.
21157 T Consensus 110 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~aviG~~~s~~~~~~a~~~~~~~ip~is~~~~s~~ls~~~ 189 (877)
21158 T 6N4X_A 110 VALEQSIEFIRDSLISSEEEEGLVRCVDGSSSSFRSKKPIVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKT 189 (877)
21159 T ss_dssp HHHHHHHHHHHHHHHC--------------------CCCEEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTT
21160 T ss_pred HHHHHHHHHHHhhcCCccccccceeccCCCCcccCCCCCeEEEECCCCcHHHHHHHHHHHHhCCCeEeecCCCcccCCcc
21161 Confidence 5555544443321000 0000000000000001124788999998888878888899999999999988877776655
21162
21163
21164 Q NP_000836.2 188 RYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIK 267 (908)
21165 Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~ 267 (908)
21166 .+++++++.|++..+++++++++++++|++|++++++++++....+.+++.+++. ++++.....+..+....++...++
21167 T Consensus 190 ~~p~~~r~~p~~~~~~~al~~~l~~~~w~~v~ii~~~~~~g~~~~~~~~~~~~~~-gi~i~~~~~~~~~~~~~~~~~~l~ 268 (877)
21168 T 6N4X_A 190 LFKYFMRVVPSDAQQARAMVDIVKRYNWTYVSAVHTEGNYGESGMEAFKDMSAKE-GICIAHSYKIYSNAGEQSFDKLLK 268 (877)
21169 T ss_dssp TSTTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEECTTTTHHHHHHHHHHHHHHH-TCEEEEEEECCSSCCSSHHHHHHH
21170 T ss_pred ccCccccCCCCHHHHHHHHHHHHHHcCCcEEEEEEeCCcchHHHHHHHHHHHHHc-CcEEEEEEEecccCChHHHHHHHH
21171 Confidence 6899999999999999999999999999999999987788888888888888775 466543322221112234556666
21172
21173
21174 Q NP_000836.2 268 RLLE-TPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFR 346 (908)
21175 Q Consensus 268 ~l~~-~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 346 (908)
21176 ++++ ..++++|++......+..+++++++.|+.+++.|++.+.|...............+.+.+.......+.|..++.
21177 T Consensus 269 ~l~~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 348 (877)
21178 T 6N4X_A 269 KLTSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFLLLGSDGWADRYDVTDGYQREAVGGITIKLQSPDVKWFDDYYL 348 (877)
21179 T ss_dssp HHHTTTTTCCEEEEECCHHHHHHHHHHHHHTTCSSCSEEEECGGGSSCHHHHTTCHHHHTTCEEEEECCCCCHHHHHHHT
21180 T ss_pred HHHhcCCCceEEEEECChhhHHHHHHHHHHhCCCCcEEEEEecccccCccccCCcccccccceeeeeeCCCCCcHHHHHH
21181 Confidence 6653 126677777766667888999998888754456777665543221100011122333333322222333433332
21182
21183
21184 Q NP_000836.2 347 SRTLANNRRNVWFAEFWEENFGCKLGSHGKR-NSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP 425 (908)
21185 Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~ 425 (908)
21186 ...+.....+.++.++|++.+++........ ..+...|+....... ......++.++|||++++++|++++....+.
21187 T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~~~yDAv~~~a~al~~~~~~~~~ 426 (877)
21188 T 6N4X_A 349 KLRPETNHRNPWFQEFWQHRFQCRLEGFPQENSKYNKTCNSSLTLKT--HHVQDSKMGFVINAIYSMAYGLHNMQMSLCP 426 (877)
21189 T ss_dssp TCCTTTCCSSTTHHHHHHHHTTCCCTTSTTCCSSCCSCCCTTCCTTT--TCCCCTTHHHHHHHHHHHHHHHHHHHHHHSS
21190 T ss_pred hcCcccCCCChHHHHHHHHHcCCcCCCCCccccCCccccCCcceecc--cccccchHHHHHHHHHHHHHHHHHHHhccCC
21191 Confidence 2211112234566777776655432110000 001112322211100 0112346778999999999999998764332
21192
21193
21194 Q NP_000836.2 426 GYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTP-VTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQL-HLKVEDM 502 (908)
21195 Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~-v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~-~~~~~~i 502 (908)
21196 .....|......++..+.+.+++.+|+|.+| + ++||++|++...+.+.+++..+ +...++.||.|+... .++ ..+
21197 T Consensus 427 ~~~~~c~~~~~~~~~~l~~~l~~~~f~G~tG-~~v~Fd~~G~~~~~~~I~~~~~~~~~~~~~~~Vg~~~~~~l~~~-~~~ 504 (877)
21198 T 6N4X_A 427 GYAGLCDAMKPIDGRKLLESLMKTNFTGVSG-DTILFDENGDSPGRYEIMNFKEMGKDYFDYINVGSWDNGELKMD-DDE 504 (877)
21199 T ss_dssp SCSSCCSSSSSCCHHHHHHHHHHCEEECTTS-CEEECCTTSCCCCEEEEEEEEECSSSCEEEEEEEEEETTEEEEC-HHH
21200 T ss_pred CCCCCccccCCCCHHHHHHHHhcCeeecCCC-CEEEeCCCCCCCceeEEEEEEEeCCCeEEEEEEEEEeCCceEec-ccc
21201 Confidence 2112232212234556778888889999988 6 9999999998889999987532 123578999998652 121 246
21202
21203
21204 Q NP_000836.2 503 QWAHREHTHPASVCSLPCKPGERKKTVKG-VPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWHS 581 (908)
21205 Q Consensus 503 ~w~~~~~~~p~s~Cs~~c~~G~~k~~~~~-~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~~~~s~ 581 (908)
21206 .|.+ +...|.+.|+++|++|+++...++ +.|||.|.+|+.++++++..+|..||.+.||+++++.|...+..+..++.
21207 T Consensus 505 ~w~~-~~~~p~s~c~~~C~~G~~~~~~~~~~~cc~~c~~C~~~~~~~~~~~c~~c~~~~~~~~~~~~c~~~~~~~~~~~~ 583 (877)
21208 T 6N4X_A 505 VWSK-KSNIIRSVCSEPCEKGQIKVIRKGEVSCCWTCTPCKENEYVFDEYTCKACQLGSWPTDDLTGCDLIPVQYLRWGD 583 (877)
21209 T ss_dssp HSSS-SSSSCCCCSSCCCCSSSCCCCCCSSCSSCCCCCCCCSSSCCCSSSCC----------------------------
21210 T ss_pred cccc-CCCcceeecCCCCCCCeeEeeeCCcceeceeEecCCCCeEeCCCcccccCCCCeeeCCCCCCCeeccceeccCCC
21211 Confidence 7865 346689999999999998877666 68999999999999998889999999999999999999887788888999
21212
21213
21214 Q NP_000836.2 582 PWAVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFLMIAAPDTIICSFRRVFLGLGMCF 661 (908)
21215 Q Consensus 582 ~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~~~~~~l~G~~l~~~~~~~~~~~~~~~~C~~~~~~~~~gf~l 661 (908)
21216 ++.+++.++++++++++++++++++++|+++.+|++++.|+.++|+|++++|++++++++.|+...|.+|.|++++||++
21217 T Consensus 584 ~~~i~~~~~~~~~i~~~~~~~~~~~~~r~~~~ik~~~~~~~~~~l~g~~l~~~~~~~~~~~~~~~~C~~~~~~~~l~f~l 663 (877)
21218 T 6N4X_A 584 PEPIAAVVFACLGLLATLFVTVVFIIYRDTPVVKSSSRELCYIILAGICLGYLCTFCLIAKPKQIYCYLQRIGIGLSPAM 663 (877)
21219 T ss_dssp --------------------------------------------------------------------------------
21220 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCchhhcCCHHHHHHHHHHHHHHHHHHHHHccCcchhhHHHHHhHHHHHHHH
21221 Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
21222
21223
21224 Q NP_000836.2 662 SYAALLTKTNRIHRIFEQGKKSV--TAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRTLDPEKARGV 739 (908)
21225 Q Consensus 662 ~~~~l~~K~~ri~~if~~~~~~~--~~~~~~~~~~l~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~ 739 (908)
21226 +||+|++|+||++++|.+++.++ ++.++++++.+++++++++++++++++.|+.++|+........ .....
21227 T Consensus 664 ~~~~l~~K~~ri~~if~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~-------~~~~~ 736 (877)
21228 T 6N4X_A 664 SYSALVTKTNRIARILAGSKKKICTKKPRFMSACAQLVIAFILICIQLGIIVALFIMEPPDIMHDYPS-------IREVY 736 (877)
21229 T ss_dssp --------------------------------------------------------------------------------
21230 T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCc-------CceEE
21231 Confidence 99999999999999998765421 1123567777888888899999999999999999876543211 12345
21232
21233
21234 Q NP_000836.2 740 LKCDISDLSLICSLGYSILLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSAEKMYIQTTTLT 819 (908)
21235 Q Consensus 740 ~~C~~~~~~~~~~~~~~~~ll~~~~~la~~~R~~~~~~nes~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (908)
21236 ..|.+.+.+++++++|+++|++++++|||++|++|++|||+|+|++++|+++++|++++++++..... +.+.+
21237 T Consensus 737 ~~C~~~~~~~~~~~~y~~~ll~~~~~la~~~R~~~~~~ne~~~i~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 809 (877)
21238 T 6N4X_A 737 LICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYK-------IITMC 809 (877)
21239 T ss_dssp --------------------------------------------------------------------------------
21240 T ss_pred EEccCCCHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHHHHHHHHHHHcCCch-------HHHHH
21241 Confidence 78998766677899999999999999999999999999999999999999999999999998654322 23666
21242
21243
21244 Q NP_000836.2 820 VSMSLSASVSLGMLYMPKVYIIIFHPEQNVQKRKRS 855 (908)
21245 Q Consensus 820 ~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~~~~ 855 (908)
21246 ++++++++++|+++|+||+|.++++|+++.+.+.+.
21247 T Consensus 810 ~~~~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~~~~ 845 (877)
21248 T 6N4X_A 810 FSVSLSATVALGCMFVPKVYIILAKPERNVRSAFTT 845 (877)
21249 T ss_dssp ------------------------------------
21250 T ss_pred HHHHHHHHHHHHHHHhhhhhHHHhCcccchhhhhee
21251 Confidence 788899999999999999999999999988765333
21252
21253
21254 No 2
21255 >6N52_B Metabotropic glutamate receptor 5; Cell Surface Receptor, MEMBRANE PROTEIN; HET: NAG; 4.0A {Homo sapiens}
21256 Probab=100.00 E-value=1.2e-76 Score=718.13 Aligned_cols=803 Identities=44% Similarity=0.810 Sum_probs=569.0 Template_Neff=10.400
21257
21258 Q NP_000836.2 34 QEYAHSIRVDGDIILGGLFPVHAKGE----RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRD 109 (908)
21259 Q Consensus 34 ~~~~~~~~~~~~i~Ig~l~p~~~~~~----~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~ 109 (908)
21260 ++.......+++++||+++|.++... ....|+......+.....|+++|++++|+++++++|+++++.+.|+++++
21261 T Consensus 29 ~~~~~~~~~~~~i~Ig~l~p~~~~~~~~~~~~~~C~~~~~~~g~~~~~a~~~Av~~iN~~~~~l~~~~l~~~i~Dt~~~~ 108 (871)
21262 T 6N52_B 29 SERRVVAHMPGDIIIGALFSVHHQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDPTLLPNITLGCEIRDSCWHS 108 (871)
21263 T ss_dssp ---CCCEEECCSEEEEEEECCBCCCCGGGTTTTCCCSBCCCCCCHHHHHHHHHHHHHHSCTTSSTTCCEEEEEEECTTSH
21264 T ss_pred CCceEEEEeCCCEEEEEEEeeccCCCcccccccccccccccccHHHHHHHHHHHHHHhcCCCCCCCCeeccEEecCCCCH
21265 Confidence 34445578899999999999987521 13467654444567788999999999999888888999999999999886
21266
21267
21268 Q NP_000836.2 110 TYALEQSLTFVQALIEK---DASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDN 186 (908)
21269 Q Consensus 110 ~~a~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~ 186 (908)
21270 ..+.+.+.+++.+.... ......|...++.+....+++++++|+.++..+.+++.++...++|++++.++++.++++
21271 T Consensus 109 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~aviG~~~s~~~~~~a~~~~~~~ip~is~~~~s~~l~~~ 188 (871)
21272 T 6N52_B 109 AVALEQSIEFIRDSLISSEEEEGLVRCVDGSSSSFRSKKPIVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDK 188 (871)
21273 T ss_dssp HHHHHHHHHHHHHHHHHHHC-------------CCCCCCCEEEEECCSCHHHHHHHHHHHGGGTCCEEESSCCCGGGGCT
21274 T ss_pred HHHHHHHHHHHHhccCCCcccccceeccCCCcccccCCCCeEEEECCCCcHHHHHHHHHHHHhCCCEEeeccCCcccCCc
21275 Confidence 65555544443321000 000000000000000112478899999888877788889999999999998877777665
21276
21277
21278 Q NP_000836.2 187 TRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKII 266 (908)
21279 Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~ 266 (908)
21280 ..+++++++.|++..+++++++++++++|+++++++++++++....+.+++.+++. ++++.....+..+.+..++...+
21281 T Consensus 189 ~~~p~~~r~~p~~~~~~~al~~~l~~~~w~~v~ii~~~~~~g~~~~~~~~~~~~~~-gi~i~~~~~~~~~~~~~~~~~~~ 267 (871)
21282 T 6N52_B 189 TLFKYFMRVVPSDAQQARAMVDIVKRYNWTYVSAVHTEGNYGESGMEAFKDMSAKE-GICIAHSYKIYSNAGEQSFDKLL 267 (871)
21283 T ss_dssp TTCTTEEESSCCSHHHHHHHHHHHHHHTCCEEEEEEESSHHHHHHHHHHHHHHTTT-TCEECCCCEECTTCCHHHHHHHH
21284 T ss_pred cccCcccCCCCCHHHHHHHHHHHHHHcCCcEEEEEEeCCcchHHHHHHHHHHHHHc-CcEEEEEEEEccCCChHHHHHHH
21285 Confidence 56899999999999999999999999999999999987778888888888888775 46654332222111223455666
21286
21287
21288 Q NP_000836.2 267 KRLLE-TPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYF 345 (908)
21289 Q Consensus 267 ~~l~~-~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (908)
21290 +++++ ..+.+++++......+..+++++++.|+.+++.|++.+.|...............+.+.+.......+.|..++
21291 T Consensus 268 ~~l~~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~~~ 347 (871)
21292 T 6N52_B 268 KKLTSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFLLLGSDGWADRYDVTDGYQREAVGGITIKLQSPDVKWFDDYY 347 (871)
21293 T ss_dssp HHHHTTTTTCCEEEEESCHHHHHHHHHHHHHHTCTTTCEEEECGGGSSCTTTTTTCTTTSTTCEEEEECCCCCHHHHHHH
21294 T ss_pred HHHHhcCCCceEEEEECChhhHHHHHHHHHHhCCCCcEEEEEecccccCccccCCchhhcccceeeeecCCCCCcHHHHH
21295 Confidence 66652 12667777766666778899999888876445677766554322110001112233333332222233333333
21296
21297
21298 Q NP_000836.2 346 RSRTLANNRRNVWFAEFWEENFGCKLGSHGKR-NSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLC 424 (908)
21299 Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~ 424 (908)
21300 ....+...+.+.++.++|++.+++........ ..+...|+..+.... ......++.++|||++++++|++++....+
21301 T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~~~yDAv~~~a~al~~~~~~~~ 425 (871)
21302 T 6N52_B 348 LKLRPETNHRNPWFQEFWQHRFQCRLEGFPQENSKYNKTCNSSLTLKT--HHVQDSKMGFVINAIYSMAYGLHNMQMSLC 425 (871)
21303 T ss_dssp HTCCTTTCCSSTTHHHHHHHHSCEECTTSTTCCTTCCEECCTTCCSCT--TCCCCTTHHHHHHHHHHHHHHHHHHHHHHS
21304 T ss_pred HhcCcccCCCChHHHHHHHHHcCCCCCCCCcccccCcccCCCcccccc--ccccchhHHHHHHHHHHHHHHHHHHHhhcC
21305 Confidence 22211122334566777776655432110000 001122332221110 012234677899999999999999876443
21306
21307
21308 Q NP_000836.2 425 PGYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTP-VTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQL-HLKVED 501 (908)
21309 Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~-v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~-~~~~~~ 501 (908)
21310 ......|......++..+.+.+++.+|.|.+| + ++||++|++...+.+.+++..+ +...++.||.|+... .++ ..
21311 T Consensus 426 ~~~~~~c~~~~~~~~~~l~~~l~~~~f~G~tG-~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~~vg~~~~~~l~~~-~~ 503 (871)
21312 T 6N52_B 426 PGYAGLCDAMKPIDGRKLLESLMKTNFTGVSG-DTILFDENGDSPGRYEIMNFKEMGKDYFDYINVGSWDNGELKMD-DD 503 (871)
21313 T ss_dssp TTCSSCCGGGSSCCSHHHHHHHHTCEEECTTC-CEEECCTTCBCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEC-TT
21314 T ss_pred CCCCCCCcccCCCCHHHHHHHHhcCceecCCC-CEEEeCCCCCCCcceEEEEEEEeCCCeEEEEEEEEEeCCceEec-cc
21315 Confidence 22112232222234556778888889999988 6 9999999998889999887532 123578999998652 122 24
21316
21317
21318 Q NP_000836.2 502 MQWAHREHTHPASVCSLPCKPGERKKTVKG-VPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWH 580 (908)
21319 Q Consensus 502 i~w~~~~~~~p~s~Cs~~c~~G~~k~~~~~-~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~~~~s 580 (908)
21320 +.|.+ +...|.+.|+.+|++|+++...++ +.|||.|.+|+.++++++..+|..||.+.||+++++.|...+..+..++
21321 T Consensus 504 ~~w~~-~~~~p~s~cs~~C~~G~~~~~~~~~~~cc~~c~~C~~~~~~~~~~~c~~c~~~~~~~~~~~~c~~~~~~~~~~~ 582 (871)
21322 T 6N52_B 504 EVWSK-KSNIIRSVCSEPCEKGQIKVIRKGEVSCCWTCTPCKENEYVFDEYTCKACQLGSWPTDDLTGCDLIPVQYLRWG 582 (871)
21323 T ss_dssp TSSSS-SCCSCCCCSSCCCCTTTEECCBCSSCSSCBCCEECCTTEEECSSSCEEECCTTEECCTTSSSCEECCCCCCCSS
21324 T ss_pred hhccc-CCCCceeeecCCCCCCeeEeccCCCCeeccCcccCCCCeEeCCCcccccCCCCeecCCCCCCceecceeeccCC
21325 Confidence 67865 346689999999999999887767 6899999999999999988999999999999999999988777888889
21326
21327
21328 Q NP_000836.2 581 SPWAVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFLMIAAPDTIICSFRRVFLGLGMC 660 (908)
21329 Q Consensus 581 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~~~~~~l~G~~l~~~~~~~~~~~~~~~~C~~~~~~~~~gf~ 660 (908)
21330 .++.+++.++++++++++++++++++++|+++++|++++.+++++|+|++++|++++++++.|+...|.+|.|++++||+
21331 T Consensus 583 ~~~~i~~~~~~~~~i~~~~~~~~~~~~~r~~~~i~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~C~~~~~~~~~gf~ 662 (871)
21332 T 6N52_B 583 DPEPIAAVVFACLGLLATLFVTVVFIIYRDTPVVKSSSRELCYIILAGICLGYLCTFCLIAKPKQIYCYLQRIGIGLSPA 662 (871)
21333 T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTTTTTTTCHHHHSSCTTHHHHHHHHHHHHHHHHHHHSSCCCTTHHHHHHHHHHHHHH
21334 T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccCcchhHHHHHHhHHHHHHH
21335 Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
21336
21337
21338 Q NP_000836.2 661 FSYAALLTKTNRIHRIFEQGKKSV--TAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRTLDPEKARG 738 (908)
21339 Q Consensus 661 l~~~~l~~K~~ri~~if~~~~~~~--~~~~~~~~~~l~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~~~~~~~~~~~~ 738 (908)
21340 ++||+|++|+||++++|++.+.++ +..++++.+.+++++++++++++++++.|+.++|+........ ....
21341 T Consensus 663 l~~~~l~~K~~ri~~if~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~p~~~~~~~~~-------~~~~ 735 (871)
21342 T 6N52_B 663 MSYSALVTKTNRIARILAGSKKKICTKKPRFMSACAQLVIAFILICIQLGIIVALFIMEPPDIMHDYPS-------IREV 735 (871)
21343 T ss_dssp HHHHHHHHHHHTCC--------------------CCHHHHHHHHHHHHHHHHHHHHHHSCCCEECCCSS-------SSCC
21344 T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCC-------CceE
21345 Confidence 999999999999999998765421 1123566777888888899999999999999999876533211 1234
21346
21347
21348 Q NP_000836.2 739 VLKCDISDLSLICSLGYSILLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSAEKMYIQTTTL 818 (908)
21349 Q Consensus 739 ~~~C~~~~~~~~~~~~~~~~ll~~~~~la~~~R~~~~~~nes~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (908)
21350 ...|.+.+.+++++++|.++|++++++|||++|++|++|||+|+|++++|+++++|++++++++..... +.+.
21351 T Consensus 736 ~~~C~~~~~~~~~~~~~~~~ll~~~~~la~~~R~~~~~~nE~k~i~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 808 (871)
21352 T 6N52_B 736 YLICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYK-------IITM 808 (871)
21353 T ss_dssp CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCT-------THHH
21354 T ss_pred EEEccCCcHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHHHHHHHHHHhCCCch-------HHHH
21355 Confidence 678998766677899999999999999999999999999999999999999999999999998755322 2366
21356
21357
21358 Q NP_000836.2 819 TVSMSLSASVSLGMLYMPKVYIIIFHPEQNVQKRKRSF 856 (908)
21359 Q Consensus 819 ~~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~~~~~ 856 (908)
21360 ++.++++++++|+++|+||+|.++++|+++.+++.+.+
21361 T Consensus 809 ~~~~~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~~~~~ 846 (871)
21362 T 6N52_B 809 CFSVSLSATVALGCMFVPKVYIILAKPERNVRSAFTTS 846 (871)
21363 T ss_dssp HHHHHHHHHHHHHTTTTTTSCCCCCSGGGC--------
21364 T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhCcccchhhhheec
21365 Confidence 67888999999999999999999999998887664443
21366
21367
21368 No 3
21369 >6N51_B Metabotropic glutamate receptor 5, Nanobody; Cell Surface Receptor, MEMBRANE PROTEIN; HET: NAG, QUS; 4.0A {Homo sapiens}
21370 Probab=100.00 E-value=6.7e-76 Score=706.52 Aligned_cols=786 Identities=44% Similarity=0.821 Sum_probs=571.7 Template_Neff=10.700
21371
21372 Q NP_000836.2 37 AHSIRVDGDIILGGLFPVHAKGE----RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYA 112 (908)
21373 Q Consensus 37 ~~~~~~~~~i~Ig~l~p~~~~~~----~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a 112 (908)
21374 ......+++++||+++|.|+... ....|+......+.+...|+++|++++|+++++++|+++++++.|+++++..+
21375 T Consensus 4 ~~~~~~~~~i~Ig~l~p~~~~~~~~~~~~~~c~~~~~~~g~~~~~a~~~Av~~iN~~~~~l~~~~l~~~~~Dt~~~~~~a 83 (804)
21376 T 6N51_B 4 RVVAHMPGDIIIGALFSVHHQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDPTLLPNITLGCEIRDSCWHSAVA 83 (804)
21377 T ss_pred cceeEecCCEEEEeEeeccCCCCCCCCCCCCcccccCcccHHHHHHHHHHHHHHHcCCCCCCCCeeeEEEEeCCCCHHHH
21378 Confidence 34467788999999999987532 13467754445667789999999999999888888999999999998876555
21379
21380
21381 Q NP_000836.2 113 LEQSLTFVQALIEK---DASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRY 189 (908)
21382 Q Consensus 113 ~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~ 189 (908)
21383 .+.+.+++.+.... ......+...++.+...++++++++|+.++..+..++.+++..++|++++.+.++.++++..+
21384 T Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~aviG~~~s~~~~~~a~~~~~~~ip~is~~~~~~~l~~~~~~ 163 (804)
21385 T 6N51_B 84 LEQSIEFIRDSLISSEEEEGLVRCVDGSSSSFRSKKPIVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLF 163 (804)
21386 T ss_pred HHHHHHHHccCCCCCcccCCceecCCCCccccccCCCceEEEcCCChHHHHHHHHHHHHhCCCccccccCCcccCCcccC
21387 Confidence 44444443210000 000000000000000112578899999888877788889999999999998877776655568
21388
21389
21390 Q NP_000836.2 190 DFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRL 269 (908)
21391 Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l 269 (908)
21392 ++++++.|++..++.++++++++++|+++++++++++++....+.+++.+++. ++++.....+..+.+..++.+.++++
21393 T Consensus 164 ~~~~r~~ps~~~~~~al~~~l~~~~w~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~i~~~~~~~~~~~~~~~~~~~~~l 242 (804)
21394 T 6N51_B 164 KYFMRVVPSDAQQARAMVDIVKRYNWTYVSAVHTEGNYGESGMEAFKDMSAKE-GICIAHSYKIYSNAGEQSFDKLLKKL 242 (804)
21395 T ss_pred CcccccCCCHHHHHHHHHHHHHHhCCcEEEEEEecChhhHHHHHHHHHHHHHc-CcEEEEEEEeCCCCCccchHHHHHHH
21396 Confidence 99999999999999999999988999999999988788888888888888775 46654332222111223455666666
21397
21398
21399 Q NP_000836.2 270 LE-TPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSR 348 (908)
21400 Q Consensus 270 ~~-~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 348 (908)
21401 ++ ..+.+++++......+..+++++++.|+.+++.|++.+.|...............+.+.+.........|..++...
21402 T Consensus 243 ~~~~~~~~vvv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 322 (804)
21403 T 6N51_B 243 TSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFLLLGSDGWADRYDVTDGYQREAVGGITIKLQSPDVKWFDDYYLKL 322 (804)
21404 T ss_pred HhcCCCcEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEeccccCCCCccccchhhhceEEEEeccCCCCCCHHHHHHhC
21405 Confidence 53 12567777666666778899999988876445677665544321110001112223333322222222333332221
21406
21407
21408 Q NP_000836.2 349 TLANNRRNVWFAEFWEENFGCKLGSHGKR-NSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGY 427 (908)
21409 Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~ 427 (908)
21410 .+.....+.++.++|++.+++........ ..+...|+..+.... ......++.++|||++++++|++++..+.+...
21411 T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~~~yDAv~~~a~al~~~~~~~~~~~ 400 (804)
21412 T 6N51_B 323 RPETNHRNPWFQEFWQHRFQCRLEGFPQENSKYNKTCNSSLTLKT--HHVQDSKMGFVINAIYSMAYGLHNMQMSLCPGY 400 (804)
21413 T ss_pred CCCCCCCChHHHHHHHHHcCCCCCCCCCCCCcCCccCCCCccccc--CCCcchhHHHHHHHHHHHHHHHHHHHhccCCCC
21414 Confidence 11112234566677766655432110000 001123332221110 012334677899999999999999876443221
21415
21416
21417 Q NP_000836.2 428 IGLCPRMSTIDGKELLGYIRAVNFNGSAGTP-VTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQL-HLKVEDMQW 504 (908)
21418 Q Consensus 428 ~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~-v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~-~~~~~~i~w 504 (908)
21419 ...|......++..+.+.+++.+|.|.+| . +.||++|++...+.+.+++..+ +...++.||.|+... .++ ..+.|
21420 T Consensus 401 ~~~c~~~~~~~~~~l~~~l~~~~f~G~tG-~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~~vg~~~~~~l~~~-~~~~w 478 (804)
21421 T 6N51_B 401 AGLCDAMKPIDGRKLLESLMKTNFTGVSG-DTILFDENGDSPGRYEIMNFKEMGKDYFDYINVGSWDNGELKMD-DDEVW 478 (804)
21422 T ss_pred CCCCcccCCCCHHHHHHHHhheeeecCCC-CEEEECCCCCcCCeeEEEEEEECCCCcEEEEEEEEEcCCceEEe-ceeec
21423 Confidence 12222212234556778888889999988 6 9999999998889999988532 223578999998652 222 24678
21424
21425
21426 Q NP_000836.2 505 AHREHTHPASVCSLPCKPGERKKTVKG-VPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWHSPW 583 (908)
21427 Q Consensus 505 ~~~~~~~p~s~Cs~~c~~G~~k~~~~~-~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~~~~s~~~ 583 (908)
21428 ..+ ...|.+.|+.+|++|+++...++ +.|||.|.+|+.++++++..+|..||.+++|+++++.|...+..+..+++++
21429 T Consensus 479 ~~~-~~~p~s~cs~~C~~g~~~~~~~~~~~cc~~c~~C~~~~~~~~~~~c~~c~~~~~~~~~~t~c~~~~~~~~~~~~~~ 557 (804)
21430 T 6N51_B 479 SKK-SNIIRSVCSEPCEKGQIKVIRKGEVSCCWTCTPCKENEYVFDEYTCKACQLGSWPTDDLTGCDLIPVQYLRWGDPE 557 (804)
21431 T ss_pred CCC-CCCCCccccCCCCCCceecCCCCCCccceeeeeCCCCcccCCCcceecCCCCCcCCCCCCceeeccchhcCCCcHH
21432 Confidence 652 46689999999999998877666 7899999999999999888999999999999999999988888888999999
21433
21434
21435 Q NP_000836.2 584 AVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFLMIAAPDTIICSFRRVFLGLGMCFSY 663 (908)
21436 Q Consensus 584 ~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~~~~~~l~G~~l~~~~~~~~~~~~~~~~C~~~~~~~~~gf~l~~ 663 (908)
21437 .+++.++++++++++++++++++++|+++.+|++++.+++++|+|++++|++++++++.|+...|.+|.|++++||+++|
21438 T Consensus 558 ~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~l~~ 637 (804)
21439 T 6N51_B 558 PIAAVVFACLGLLATLFVTVVFIIYRDTPVVKSSSRELCYIILAGICLGYLCTFCLIAKPKQIYCYLQRIGIGLSPAMSY 637 (804)
21440 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
21441 Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
21442
21443
21444 Q NP_000836.2 664 AALLTKTNRIHRIFEQGKKSV--TAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRTLDPEKARGVLK 741 (908)
21445 Q Consensus 664 ~~l~~K~~ri~~if~~~~~~~--~~~~~~~~~~l~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 741 (908)
21446 |+|++|+||++++|++++.++ +..++++.+.+++++++++++|+++++.|+.++|+........ ....+..
21447 T Consensus 638 ~~l~~K~~ri~~if~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~-------~~~~~~~ 710 (804)
21448 T 6N51_B 638 SALVTKTNRIARILAGSKKKICTKKPRFMSACAQLVIAFILICIQLGIIVALFIMEPPDIMHDYPS-------IREVYLI 710 (804)
21449 T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC-------CCcEEEE
21450 Confidence 999999999999998765321 1123456677777888889999999999999999876543211 1234668
21451
21452
21453 Q NP_000836.2 742 CDISDLSLICSLGYSILLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSAEKMYIQTTTLTVS 821 (908)
21454 Q Consensus 742 C~~~~~~~~~~~~~~~~ll~~~~~la~~~R~~~~~~nes~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (908)
21455 |...+.+++++++|.++|++++++|||++|++|++|||+|+|++++|+++++|++++++++..... +.+.+++
21456 T Consensus 711 C~~~~~~~~~~~~~~~~ll~~~~~la~~~r~~~~~~~e~~~i~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 783 (804)
21457 T 6N51_B 711 CNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYK-------IITMCFS 783 (804)
21458 T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccHHHHHHHHHHHHHHHHHHHHHHHhCCCch-------HHHHHHH
21459 Confidence 998766677899999999999999999999999999999999999999999999999998765322 2366788
21460
21461
21462 Q NP_000836.2 822 MSLSASVSLGMLYMPKVYIII 842 (908)
21463 Q Consensus 822 i~~~~~~~l~~~f~PK~~~i~ 842 (908)
21464 ++++++++|+++|+||+|.|+
21465 T Consensus 784 ~~~~~~~~l~~~f~Pk~~~i~ 804 (804)
21466 T 6N51_B 784 VSLSATVALGCMFVPKVYIIL 804 (804)
21467 T ss_pred HHHHHHHHHHHHHHhhhhhcC
21468 Confidence 899999999999999999874
21469
21470
21471 No 4
21472 >6W2Y_A Gamma-aminobutyric acid type B receptor; Inhibitor, Homodimer, GPCR, SIGNALING PROTEIN; HET: SGG, L9Q, NAG; 3.2A {Homo sapiens}
21473 Probab=100.00 E-value=3.8e-66 Score=620.75 Aligned_cols=685 Identities=21% Similarity=0.299 Sum_probs=472.4 Template_Neff=10.100
21474
21475 Q NP_000836.2 36 YAHSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQ 115 (908)
21476 Q Consensus 36 ~~~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~ 115 (908)
21477 .......+++++||+++|.++.. ..+.....|+++|++++|+++++++|+++++.+.|+++++..+.+.
21478 T Consensus 22 ~~~~~~~~~~i~IG~l~p~~~~~-----------~~g~~~~~a~~~Av~~iN~~~~il~g~~l~l~~~Dt~~~~~~a~~~ 90 (829)
21479 T 6W2Y_A 22 PPHPSSERRAVYIGALFPMSGGW-----------PGGQACQPAVEMALEDVNSRRDILPDYELKLIHHDSKCDPGQATKY 90 (829)
21480 T ss_dssp ------CCEEEEEEEEECSSSSC-----------CCSTTTHHHHHHHHHHHHHCTTTSTTEEEEEEEEECTTCHHHHHHH
21481 T ss_pred CCCCCCCCceEEEEEEEecCCCC-----------CCcchHHHHHHHHHHHHHhCCCCCCCcEEEEEEecCCCCHHHHHHH
21482 Confidence 34455677899999999998642 1356778999999999999888888999999999998876544433
21483
21484
21485 Q NP_000836.2 116 SLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRV 195 (908)
21486 Q Consensus 116 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~ 195 (908)
21487 +.+++. .+++++++|+.++..+..++.+++.+++|+|+++++++.++++..+++++|+
21488 T Consensus 91 ~~~l~~----------------------~~~v~~viG~~~s~~~~~va~~~~~~~ip~is~~a~s~~ls~~~~~p~~frt 148 (829)
21489 T 6W2Y_A 91 LYELLY----------------------NDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRT 148 (829)
21490 T ss_dssp HHHTTS----------------------SSSCEEEEEECSHHHHHHHHHTTTTTTCEEEESSCCCGGGGCTTTCTTEEES
21491 T ss_pred HHHHHh----------------------cCCcEEEEECCChHHHHHHHHHHHHcCCEEEecccCChhHhccccCCceEEc
21492 Confidence 333322 1478899999888888888899999999999999888887776678999999
21493
21494
21495 Q NP_000836.2 196 VPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNA 275 (908)
21496 Q Consensus 196 ~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (908)
21497 .|++..++.++++++++++|++|++++++++++....+.+++.+++. ++++.....+. .+....++++++ .++
21498 T Consensus 149 ~ps~~~~~~a~~~ll~~~~w~~vaii~~~~~~~~~~~~~~~~~~~~~-gi~v~~~~~~~-----~d~~~~~~~l~~-~~~ 221 (829)
21499 T 6W2Y_A 149 HPSATLHNPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERVKEA-GIEITFRQSFF-----SDPAVPVKNLKR-QDA 221 (829)
21500 T ss_dssp SCCSGGGHHHHHHHHHHHCCCEEEEEECCSTTHHHHHHHHHHHHHTT-TCEEEEEEECS-----SCCHHHHHHHHH-TTC
21501 T ss_pred CCChhhccHHHHHHHHHhCCeEEEEEEeCCcccchhHHHHHHHHHHc-CCEEEEEEccc-----CCchHHHHHHhh-CCC
21502 Confidence 99999999999999999999999999988888888888888888775 47765443332 134455667763 578
21503
21504
21505 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSD----SWGSKIAPV-----YQQEEIAEGAVTILPKRASIDGFDRYF 345 (908)
21506 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~----~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (908)
21507 ++|++......+..+++++++.|+.+ ++.|+..+ .|....... .......+|.+.......
21508 T Consensus 222 riIv~~~~~~~~~~~l~~a~~~g~~~~~~vwi~~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--------- 292 (829)
21509 T 6W2Y_A 222 RIIVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIYDPSINCTVDEMTEAVEGHITTEIVML--------- 292 (829)
21510 T ss_dssp SEEEEECCHHHHHHHHHHHTTTTCCSTTCEEEEESCSCSSCTTSCCTTCCSCHHHHHTTTTTCEEEEECCS---------
21511 T ss_pred EEEEEeCCHHHHHHHHHHHHHccccCCCeEEEEeccccccchhccCCCCCCCHHHHHHHHcccEEEEEecc---------
21512 Confidence 99988877777888999998888764 56777653 222110000 001112233322211000
21513
21514
21515 Q NP_000836.2 346 RSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP 425 (908)
21516 Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~ 425 (908)
21517 ... ......+.++.++++++..+ .... + . ......++..+|||++++++|++++....+.
21518 T Consensus 293 ~~~-~~~~~~~~~~~~f~~~~~~~-~~~~---~----~-----------~~~~~~~a~~~YDAv~~~a~Al~~~~~~~~~ 352 (829)
21519 T 6W2Y_A 293 NPA-NTRSISNMTSQEFVEKLTKR-LKRH---P----E-----------ETGGFQEAPLAYDAIWALALALNKTSGGGGR 352 (829)
21520 T ss_dssp CCS-CCCCTTSCCHHHHHHHHHTT-CSSC---T----T-----------TSTTSSSHHHHHHHHHHHHHHHHHHC-----
21521 T ss_pred CCC-CCCCcCCCCHHHHHHHHHHH-HhcC---C----c-----------cCCCCccccHHHHHHHHHHHHHHHHhhcCcc
21522 Confidence 000 00000122233333322111 1000 0 0 0112345778999999999999998754321
21523
21524
21525 Q NP_000836.2 426 GYIGLCPR----MSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVED 501 (908)
21526 Q Consensus 426 ~~~~~~~~----~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~ 501 (908)
21527 . +.+.. .....++.+.++|++.+|.|.+| ++.||++|++...+.+.+++ ++.++.||.|+.... .
21528 T Consensus 353 ~--~~~~~~~~~~~~~~~~~l~~~l~~~~f~G~tG-~v~fd~~G~r~~~~~i~~~~----~~~~~~vg~~~~~~~----~ 421 (829)
21529 T 6W2Y_A 353 S--GVRLEDFNYNNQTITDQIYRAMNSSSFEGVSG-HVVFDASGSRMAWTLIEQLQ----GGSYKKIGYYDSTKD----D 421 (829)
21530 T ss_dssp -----CCTTCCTTCTTHHHHHHHHHHTCEEEETTE-EEEBCTTSCBCCEEEEEEES----SSSEEEEEEEETTTC----C
21531 T ss_pred C--CCCHHHcCCCChHHHHHHHHHHHcCcccccee-eEEeCCCCCccceEEEEEee----CCeEEEEEEEECCCC----C
21532 Confidence 1 10100 01123446778888889999988 89999999998888888887 357899999986531 2
21533
21534
21535 Q NP_000836.2 502 MQWAHREHTHPASVCSLPCKPGERKKTVKGVPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWHS 581 (908)
21536 Q Consensus 502 i~w~~~~~~~p~s~Cs~~c~~G~~k~~~~~~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~~~~s~ 581 (908)
21537 +.|... ..|+.|. +|.| ++.| ...+..++.
21538 T Consensus 422 l~~~~~----------~~w~~g~-------------------------------~p~d------~~~~---~~~~~~~s~ 451 (829)
21539 T 6W2Y_A 422 LSWSKT----------DKWIGGS-------------------------------PPAD------QTLV---IKTFRFLSQ 451 (829)
21540 T ss_dssp CBCCSC----------CCCSSSS-------------------------------CCCS------SCCE---EEEECCCCS
21541 T ss_pred ceecCC----------CccCCCC-------------------------------CCCC------Ccee---ceeecccCH
21542 Confidence 344221 1222221 2434 4444 334455667
21543
21544
21545 Q NP_000836.2 582 PWAVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFL------MIAAP-DTIICSFRRVF 654 (908)
21546 Q Consensus 582 ~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~~~~~~l~G~~l~~~~~~~------~~~~~-~~~~C~~~~~~ 654 (908)
21547 ++.+++.++++++++++++++++++++|+++.+|+++|.+++++|+|++++|+++++ ++..+ +...|.+|.|+
21548 T Consensus 452 ~~~i~~~~~~~~gi~~~~~~~~~~~~~r~~~~ik~s~~~l~~~~l~G~~l~~~~~~~~~~~~~~i~~~~~~~~C~~~~~~ 531 (829)
21549 T 6W2Y_A 452 KLFISVSVLSSLGIVLAVVCLSFNIYNSHVRYIQNSQPNLNNLTAVGCSLALAAVFPLGLDGYHIGRNQFPFVCQARLWL 531 (829)
21550 T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHSCSSSHHHHHSCHHHHHHHHHHHHHHHHTTTTTTCSSSSCCTTTHHHHHHHHHHH
21551 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccChhhhCCCHHHHHHHHHHHHHHHHHHHHhcCCccCCCcccccHHHHHHHHH
21552 Confidence 788888999999999999999999999999999999999999999999999999986 34444 68999999999
21553
21554
21555 Q NP_000836.2 655 LGLGMCFSYAALLTKTNRIHRIFEQGKKSVTAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRT---- 730 (908)
21556 Q Consensus 655 ~~~gf~l~~~~l~~K~~ri~~if~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~~~~---- 730 (908)
21557 +++||+++||+|++|+||++++|++++.++.+++.++++.++.++++++++|++++++|++++|+..........+
21558 T Consensus 532 ~~~gf~l~~~~l~~K~~ri~~if~~~~~~~~~~~~~~~~~l~~~~~~l~~i~~iil~~w~~~~p~~~~~~~~~~~~~~~~ 611 (829)
21559 T 6W2Y_A 532 LGLGFSLGYGSMFTKIWWVHTVFTKKEEKKEWRKTLEPWKLYATVGLLVGMDVLTLAIWQIVDPLHRTIETFAKEEPKED 611 (829)
21560 T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC---------------CCHHHHHHHHHHHHHHHHHHHHHHSCCCEEEEECCCCCC---
21561 T ss_pred HHHHHHHHHHHhhhhceEEEEEeecccccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHCcccceeeecccCCCCcc
21562 Confidence 9999999999999999999999997765322245678899999999999999999999999999986543211000
21563
21564
21565 Q NP_000836.2 731 LDPEKARGVLKCDISD--LSLICSLGYSILLMVTCTVYAIKTRGVP-ETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQS 807 (908)
21566 Q Consensus 731 ~~~~~~~~~~~C~~~~--~~~~~~~~~~~~ll~~~~~la~~~R~~~-~~~nes~~i~~~~~~~~~~~~~~~~~~~~~~~~ 807 (908)
21567 .+....+..+.|.+.+ .|++++++|+++|+++|++|||++|+++ ++|||+|+|++++|+++++|+++++++++....
21568 T Consensus 612 ~~~~~~~~~~~C~~~~~~~~~~~~~~y~~lll~~~~~la~~tR~~~~~~~nes~~i~~~~~~~~~~~~~~~~~~~~~~~~ 691 (829)
21569 T 6W2Y_A 612 IDVSILPQLEHCSSRKMNTWLGIFYGYKGLLLLLGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQ 691 (829)
21570 T ss_dssp -CCEEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHHTCC------CCCSTHHHHHHHHHHHHHHHHHHHHHGGGC
21571 T ss_pred CCceeeceEEeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCc
21572 Confidence 0000123367999864 7888999999999999999999999999 899999999999999999999999998766543
21573
21574
21575 Q NP_000836.2 808 AEKMYIQTTTLTVSMSLSASVSLGMLYMPKVYIIIFHPEQNVQKRK 853 (908)
21576 Q Consensus 808 ~~~~~~~~~~~~~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~~ 853 (908)
21577 + ...+.+.+++++++++++|+++|+||+|.++++++.+.+...
21578 T Consensus 692 ~---~~~~~~~~~~i~~~~~~~l~~~f~PK~~~~~~~~~~~~~~~~ 734 (829)
21579 T 6W2Y_A 692 Q---DAAFAFASLAIVFSSYITLVVLFVPKMRRLITRGEWQSEAQD 734 (829)
21580 T ss_dssp T---TTHHHHHHHHHHHHHHHHHHHHTHHHHHHHC-----------
21581 T ss_pred h---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhh
21582 Confidence 2 355678889999999999999999999999998887765543
21583
21584
21585 No 5
21586 >6W2X_B Gamma-aminobutyric acid type B receptor; Inhibitor, Heterodimer, GPCR, SIGNALING PROTEIN; HET: SGG, L9Q, NAG; 3.6A {Homo sapiens}
21587 Probab=100.00 E-value=8.6e-65 Score=611.36 Aligned_cols=678 Identities=20% Similarity=0.302 Sum_probs=482.9 Template_Neff=9.500
21588
21589 Q NP_000836.2 36 YAHSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQ 115 (908)
21590 Q Consensus 36 ~~~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~ 115 (908)
21591 ........++++||+++|.++.... ...+.....|+++|++++|+++ .++|+++++.+.|+++++..+.+.
21592 T Consensus 13 ~~~~~~~~~~i~IG~l~p~s~~~~~--------~~~g~~~~~a~~~Av~~IN~~~-~l~~~~l~l~~~Dt~~~~~~a~~~ 83 (908)
21593 T 6W2X_B 13 APRPPPSSPPLSIMGLMPLTKEVAK--------GSIGRGVLPAVELAIEQIRNES-LLRPYFLDLRLYDTECDNAKGLKA 83 (908)
21594 T ss_dssp -------CCEEEEEEECCCCSSSTT--------THHHHSSHHHHHHHHHHHHHHT-CSSSCEEEEEEECCTTCHHHHHHH
21595 T ss_pred CCCCCCCCCCEEEEEEEeCCccccC--------CcccccHHHHHHHHHHHHHhcC-CCCCeEEEEEEecCCCChHHHHHH
21596 Confidence 3445567889999999999874310 0246678899999999999875 466899999999998876544443
21597
21598
21599 Q NP_000836.2 116 SLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRV 195 (908)
21600 Q Consensus 116 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~ 195 (908)
21601 +.+++. . .+++++++|+.++..+.+++.+++.+++|+|+++++++.++++..+++++|+
21602 T Consensus 84 ~~~ll~----~-----------------~~~v~aviG~~~S~~~~~va~~~~~~~ip~Is~~ats~~Ls~~~~yp~ffrt 142 (908)
21603 T 6W2X_B 84 FYDAIK----Y-----------------GPNHLMVFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADKKKYPYFFRT 142 (908)
21604 T ss_dssp HHHHHH----T-----------------SCCCCCEEECCSHHHHHHHTTSCTTTTCCEEESSCCCSGGGCTTTCSSEEES
21605 T ss_pred HHHHHH----h-----------------CCCeEEEEecCCHHHHHHHHHHhcccCCEEEEcccCChhHcCcccCCceeec
21606 Confidence 333332 1 1368899999988888888999999999999999988888776678999999
21607
21608
21609 Q NP_000836.2 196 VPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNA 275 (908)
21610 Q Consensus 196 ~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (908)
21611 .|++..+++++++++++++|++|++++++++++....+.+++.+++. ++++.....+. .+....++++++ .++
21612 T Consensus 143 ~ps~~~~~~al~~ll~~~~W~~Vaii~~d~~~g~~~~~~~~~~~~~~-gi~i~~~~~~~-----~d~~~~l~~lk~-~~a 215 (908)
21613 T 6W2X_B 143 VPSDNAVNPAILKLLKHYQWKRVGTLTQDVQRFSEVRNDLTGVLYGE-DIEISDTESFS-----NDPCTSVKKLKG-NDV 215 (908)
21614 T ss_dssp SCCTTSSHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHTTTS-SCEEEEEEEES-----SCCHHHHHHHHH-HTC
21615 T ss_pred CCCHHhhcHHHHHHHHHcCCcEEEEEEeccHHHHHHHHHHHHHHhcC-CCEEeeEeeec-----CChhHHHHHHhc-CCc
21616 Confidence 99999999999999999999999999988888888888888877775 46765443332 234556677763 578
21617
21618
21619 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVY-------------QQEEIAEGAVTILPKRASIDGF 341 (908)
21620 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~ 341 (908)
21621 ++|++......+..+++++.+.|+.+ ++.|+..+ |........ ......+|.+.+.........+
21622 T Consensus 216 riIv~~~~~~~~~~~l~~a~~~g~~~~~~vwI~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~ 294 (908)
21623 T 6W2X_B 216 RIILGQFDQNMAAKVFCCAYEENMYGSKYQWIIPG-WYEPSWWEQVHTEANSSRCLRKNLLAAMEGYIGVDFEPLSSKQI 294 (908)
21624 T ss_dssp CEEECCCCHHHHHHHHHHHHHHTCCSTTCEEECCC-CCCTTTTC------------CHHHHHHHSSEEEEEECSSCCCCC
21625 T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCCCeEEEeec-CCCcchHHhccccccCCcchHHHHHHHHCCceEEEecCCCcCcc
21626 Confidence 99888877777888999998888764 57788764 322110000 0111223333222111000000
21627
21628
21629 Q NP_000836.2 342 DRYFRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHK 421 (908)
21630 Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~ 421 (908)
21631 ..+ ......++. +.+.+... ...+..++.++|||++++|+|++++..
21632 T Consensus 295 ~~~----------~~~~~~~~~-~~~~~~~~----------------------~~~~~~~~~~aYDAv~~lA~Al~~~~~ 341 (908)
21633 T 6W2X_B 295 KTI----------SGKTPQQYE-REYNNKRS----------------------GVGPSKFHGYAYDGIWVIAKTLQRAME 341 (908)
21634 T ss_dssp CCT----------TSCCHHHHH-HHHHHHCS----------------------SSCCCTTHHHHHHHHHHHHHHHHHHHH
21635 T ss_pred ccc----------CCCCHHHHH-HHHHhhcC----------------------CCCCccchHHHHHHHHHHHHHHHHHHH
21636 Confidence 000 000011111 11211100 012345678899999999999999876
21637
21638
21639 Q NP_000836.2 422 DLCPGY----IGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLH- 496 (908)
21640 Q Consensus 422 ~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~- 496 (908)
21641 ..+... ...+.......+..+.++|++.+|.|.+| ++.|| +|++...+.+.+++ ++.++.||.|+....
21642 T Consensus 342 ~~~~~~~~~~l~~~~~~~~~~g~~l~~~l~~~~F~G~tG-~v~Fd-~Gdr~~~~~I~~~~----~~~~~~VG~~~~~~~~ 415 (908)
21643 T 6W2X_B 342 TLHASSRHQRIQDFNYTDHTLGRIILNAMNETNFFGVTG-QVVFR-NGERMGTIKFTQFQ----DSREVKVGEYNAVADT 415 (908)
21644 T ss_dssp HHHTC-----CCSCCTTCHHHHHHHHHHHTSCCCEETTE-ECCBS-SSSBCCEEEEEEEC----SSSEEEEEEEETTTTE
21645 T ss_pred HHHhcCCCCcHHhcCCCChHHHHHHHHHHHcCceecCce-eEEEe-CCceeceEEEEEEe----CCeEEEEEEEECCCCe
21646 Confidence 432110 00010111224556778888889999988 89999 89998889999988 257899999986421
21647
21648
21649 Q NP_000836.2 497 --LKVEDMQWAHREHTHPASVCSLPCKPGERKKTVKGVPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPI 574 (908)
21650 Q Consensus 497 --~~~~~i~w~~~~~~~p~s~Cs~~c~~G~~k~~~~~~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~ 574 (908)
21651 +....+.|.+ |. +|.+ ++.| ..
21652 T Consensus 416 l~~~~~~i~w~g----------------~~-------------------------------~P~d------~~~~---~~ 439 (908)
21653 T 6W2X_B 416 LEIINDTIRFQG----------------SE-------------------------------PPKD------KTII---LE 439 (908)
21654 T ss_dssp EECCTTTCCCSS----------------SS-------------------------------CCCS------SCCE---EC
21655 T ss_pred EEEEccccccCC----------------CC-------------------------------CCCC------ccch---hh
21656 Confidence 1111223321 10 2333 3333 23
21657
21658
21659 Q NP_000836.2 575 IKLEWHSPWAVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFLMIAAPD-------TII 647 (908)
21660 Q Consensus 575 ~~~~~s~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~~~~~~l~G~~l~~~~~~~~~~~~~-------~~~ 647 (908)
21661 ....++.++.+++.++++++++++++++++++++|+++.+|++++.+++++|+|++++|++++++++.++ ...
21662 T Consensus 440 ~~~~~~~~~~~~~~~~~~~gi~~~~~~l~~~~~~r~~~~ik~s~~~l~~~il~G~~l~~~~~~~~~~~~~~~~~~~~~~~ 519 (908)
21663 T 6W2X_B 440 QLRKISLPLYSILSALTILGMIMASAFLFFNIKNRNQKLIKMSSPYMNNLIILGGMLSYASIFLFGLDGSFVSEKTFETL 519 (908)
21664 T ss_dssp CCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHSCSSHHHHHHHHHHHHHHHHHHHHCCSSSSCHHHHHHH
21665 T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHhCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHH
21666 Confidence 3336677788888899999999999888899999999999999999999999999999999999888776 789
21667
21668
21669 Q NP_000836.2 648 CSFRRVFLGLGMCFSYAALLTKTNRIHRIFEQGKKSVTAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGE 727 (908)
21670 Q Consensus 648 C~~~~~~~~~gf~l~~~~l~~K~~ri~~if~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~ 727 (908)
21671 |.+|.|++++||+++||+|++|+||++++|++++.+ ++.++++.++.+++++++++++++++|++++|+........
21672 T Consensus 520 C~~~~w~~~lgf~l~~g~l~~K~~Ri~~if~~~~~~---~~~~~~~~l~~~~~~~~~i~~~il~~w~~~~p~~~~~~~~~ 596 (908)
21673 T 6W2X_B 520 CTVRTWILTVGYTTAFGAMFAKTWRVHAIFKNVKMK---KKIIKDQKLLVIVGGMLLIDLCILICWQAVDPLRRTVEKYS 596 (908)
21674 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
21675 T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCcccc---ccccCHHHHHHHHHHHHHHHHHHHHHHHHhCccchhhhccc
21676 Confidence 999999999999999999999999999999876543 34678889999999999999999999999999876532110
21677
21678
21679 Q NP_000836.2 728 QRT----LDPEKARGVLKCDIS--DLSLICSLGYSILLMVTCTVYAIKTRGVP-ETFNEAKPIGFTMYTTCIIWLAFIPI 800 (908)
21680 Q Consensus 728 ~~~----~~~~~~~~~~~C~~~--~~~~~~~~~~~~~ll~~~~~la~~~R~~~-~~~nes~~i~~~~~~~~~~~~~~~~~ 800 (908)
21681 ... .+.........|.+. ..|++++++|+++|+++|++|||++|++| ++|||+|+|++++|+++++|++++++
21682 T Consensus 597 ~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~y~~llll~~~~la~~tR~v~~~~~nEsk~i~~a~~~~~~~~~~~~~~ 676 (908)
21683 T 6W2X_B 597 MEPDPAGRDISIRPLLEHCENTHMTIWLGIVYAYKGLLMLFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAV 676 (908)
21684 T ss_dssp CBCC-----CEECCEEEEEECSSCHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCSSCCCHHHHHHHHHHHHHHHHHHHHH
21685 T ss_pred CCCCCCCCCceeeceEEeecCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccHHHHHHHHHHHHHHHHHHHHH
21686 Confidence 000 000012445789885 37888999999999999999999999999 99999999999999999999999999
21687
21688
21689 Q NP_000836.2 801 FFGTAQSAEKMYIQTTTLTVSMSLSASVSLGMLYMPKVYIIIFHPEQNVQKR 852 (908)
21690 Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~ 852 (908)
21691 +++....+ .+.+++.+++++++++++|+++|+||+|.++++|+++....
21692 T Consensus 677 ~~~~~~~~---~~~~~~~~~~i~~~~~~~l~~if~PK~~~i~~~~~~~~~~~ 725 (908)
21693 T 6W2X_B 677 SFLTRDQP---NVQFCIVALVIIFCSTITLCLVFVPKLITLRTNPDAATQNR 725 (908)
21694 T ss_dssp HHHCSSSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------
21695 T ss_pred HHHhcCCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhcccc
21696 Confidence 88765432 35667888999999999999999999999999988765543
21697
21698
21699 No 6
21700 >6UO8_A Gamma-aminobutyric acid type B receptor; G protein-coupled receptor, GABA, GABAB; HET: BMA, QDA, NAG;{Homo sapiens}
21701 Probab=100.00 E-value=9.3e-65 Score=605.48 Aligned_cols=682 Identities=21% Similarity=0.300 Sum_probs=482.9 Template_Neff=10.700
21702
21703 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
21704 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
21705 .+++++||+++|.+++. ..+.....|+++|++++|+++++++|+++++.+.|+++++..+.+.+.+++.
21706 T Consensus 3 ~~~~i~Ig~l~p~s~~~-----------~~~~~~~~a~~~Av~~iN~~~~il~g~~l~~~~~D~~~~~~~a~~~~~~l~~ 71 (762)
21707 T 6UO8_A 3 ERRAVYIGALFPMSGGW-----------PGGQACQPAVEMALEDVNSRRDILPDYELKLIHHDSKCDPGQATKYLYELLY 71 (762)
21708 T ss_dssp CCEEEEEEEEECCSSSC-----------CCHHHHHHHHHHHHHHHTTCTTTCSSEEEEEEEEECTTCHHHHHHHHHHHHT
21709 T ss_pred CceeEEEEEEEecCCCC-----------CCcccHHHHHHHHHHHHHcCCCCCCCcEEEEEEccCCCCHHHHHHHHHHHHh
21710 Confidence 45789999999998753 1356678999999999999888888999999999998875544333333322
21711
21712
21713 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
21714 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
21715 ++++++++|+.++..+..++.+++.+++|++++.++++.++++..+|+++|+.|++..
21716 T Consensus 72 ----------------------~~~v~~viG~~~s~~~~~va~~~~~~~ip~is~~a~s~~ls~~~~~p~~fr~~ps~~~ 129 (762)
21717 T 6UO8_A 72 ----------------------NDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATL 129 (762)
21718 T ss_dssp ----------------------SSSCEEEEECCSHHHHHHHHHHGGGTTCEEEESSCCCGGGGCTTTCTTEEECSCCGGG
21719 T ss_pred ----------------------cCCcEEEEECCCHHHHHHHHHHHHHcCCEEEecccCChhhhccccCCceeecCCChhh
21720 Confidence 1478899999888888888889999999999999888877766678999999999999
21721
21722
21723 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
21724 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
21725 +++++++++++++|++|++++++++++....+.+++.+++. ++++.....+. .+....++++++ .++|+|++.
21726 T Consensus 130 ~~~a~~~~l~~~~w~~vaii~~~~~~~~~~~~~~~~~~~~~-gi~v~~~~~~~-----~~~~~~l~~l~~-~~~~vIv~~ 202 (762)
21727 T 6UO8_A 130 HNPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERVKEA-GIEITFRQSFF-----SDPAVPVKNLKR-QDARIIVGL 202 (762)
21728 T ss_dssp SHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHTGGG-SCEEEECCEES-----SCCHHHHHHHHH-HTCSEEEEE
21729 T ss_pred ccHHHHHHHHHhCCcEEEEEEeCCccchhHHHHHHHHHHHc-CcEEEEEeccc-----CCchHHHHHHHh-CCCEEEEEe
21730 Confidence 99999999999999999999988888888888888887775 46665443332 134445666763 578988888
21731
21732
21733 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSG-HFLWIGSD----SWGSKIAP-----VYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLA 351 (908)
21734 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~-~~~~i~~~----~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (908)
21735 .....+..+++++++.|+.+ ++.|+..+ .|...... ........+|.+...... .... ..
21736 T Consensus 203 ~~~~~~~~~l~~a~~~g~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---------~~~~-~~ 272 (762)
21737 T 6UO8_A 203 FYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIYDPSINCTVDEMTEAVEGHITTEIVM---------LNPA-NT 272 (762)
21738 T ss_dssp CCSHHHHHHHHHHGGGTCCSSSCEEEEESCSCTTTTSSCCTTCCCCTHHHHTTSCSEEEEEECC---------SCCS-CC
21739 T ss_pred CCHHHHHHHHHHHHHcCcCCCCeEEEEEcccccchhhhcCCCCCCCHHHHHHHHCCcEEEEeec---------cCCC-CC
21740 Confidence 77777888999998888754 56777653 22211000 000111222322211100 0000 00
21741
21742
21743 Q NP_000836.2 352 NNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLC 431 (908)
21744 Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~ 431 (908)
21745 ....+.++.++++++... .... + . ......++..+|||++++++|+++.....+.. +.+
21746 T Consensus 273 ~~~~~~~~~~f~~~~~~~-~~~~---~----~-----------~~~~~~~~~~~yDav~~~a~al~~~~~~~~~~--~~~ 331 (762)
21747 T 6UO8_A 273 RSISNMTSQEFVEKLTKR-LKRH---P----E-----------ETGGFQEAPLAYDAIWALALALNKTSGGGGRS--GVR 331 (762)
21748 T ss_dssp CCTTSCCTTHHHHHHHHH-CSSC---T----T-----------TSTTCTTHHHHHHHHHHHHHHHHHHC----------C
21749 T ss_pred cCcCCCCHHHHHHHHHHH-HhcC---C----c-----------cCCCCccccHHHHHHHHHHHHHHHHhhcCccC--CCC
21750 Confidence 001122333433322111 1000 0 0 01123457789999999999999986543211 000
21751
21752
21753 Q NP_000836.2 432 PR----MSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAHR 507 (908)
21754 Q Consensus 432 ~~----~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~~~ 507 (908)
21755 .. .....++.+.+.|++.+|.|.+| ++.||++|++...+.+.+++ ++.++.||.|+.... .+.|...
21756 T Consensus 332 ~~~~~~~~~~~~~~l~~~l~~~~f~G~~G-~v~fd~~G~r~~~~~i~~~~----~~~~~~vg~~~~~~~----~~~~~~~ 402 (762)
21757 T 6UO8_A 332 LEDFNYNNQTITDQIYRAMNSSSFEGVSG-HVVFDASGSRMAWTLIEQLQ----GGSYKKIGYYDSTKD----DLSWSKT 402 (762)
21758 T ss_dssp TTCCCSSCCTTHHHHHHHHHTCCCBCSSS-BCCCSSSSCCCCCEEEEEEE----TTEEEEEEEECSSSC----CCCCCCC
21759 T ss_pred HHHcCCCCHHHHHHHHHHHHcCcccccce-eeEeCCCCCccceEEEEEEe----CCeEEEEEEEECCCC----ceeecCC
21760 Confidence 00 01123446777888889999988 89999999998888888887 357899999986521 2344211
21761
21762
21763 Q NP_000836.2 508 EHTHPASVCSLPCKPGERKKTVKGVPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWHSPWAVVP 587 (908)
21764 Q Consensus 508 ~~~~p~s~Cs~~c~~G~~k~~~~~~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~~~~s~~~~~~~ 587 (908)
21765 ..|+.|. +|.| ++.| +..+..++.++.+++
21766 T Consensus 403 ----------~~~~~g~-------------------------------~p~d------~~~~---~~~~~~~~~~~~~~~ 432 (762)
21767 T 6UO8_A 403 ----------DKWIGGS-------------------------------PPAD------QTLV---IKTFRFLSQKLFISV 432 (762)
21768 T ss_dssp ----------CCCGGGS-------------------------------CCCC------CCCE---EEECCCCTTHHHHHH
21769 T ss_pred ----------CccCCCC-------------------------------CCCC------ccee---hhccchhCHHHHHHH
21770 Confidence 1222221 2333 4444 333445567778888
21771
21772
21773 Q NP_000836.2 588 VFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFL------MIAAP-DTIICSFRRVFLGLGMC 660 (908)
21774 Q Consensus 588 ~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~~~~~~l~G~~l~~~~~~~------~~~~~-~~~~C~~~~~~~~~gf~ 660 (908)
21775 .++++++++++++++++++++|+++.+|+++|.+++++|+|++++|+++++ ++..+ +...|.+|.|++++||+
21776 T Consensus 433 ~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~l~~~~l~g~~l~~~~~~~~~~~~~~i~~~~~~~~C~~~~~~~~~gf~ 512 (762)
21777 T 6UO8_A 433 SVLSSLGIVLAVVCLSFNIYNSHVRYIQNSQPNLNNLTAVGCSLALAAVFPLGLDGYHIGRNQFPFVCQARLWLLGLGFS 512 (762)
21778 T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCSHHHHSSCTHHHHHHHHHHHHHHTTSHHHHCCTTTTTTTCHHHHHHHHHHHHHHHHH
21779 T ss_pred HHHHHHHHHHHHHHHHHHHHccCChhHhccCHHHHHHHHHHHHHHHHhHHhhCCCCCCCCccchHHHHHHHHHHHHHhHH
21780 Confidence 899999999999999999999999999999999999999999999999986 34445 68999999999999999
21781
21782
21783 Q NP_000836.2 661 FSYAALLTKTNRIHRIFEQGKKSVTAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRT----LDPEKA 736 (908)
21784 Q Consensus 661 l~~~~l~~K~~ri~~if~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~~~~----~~~~~~ 736 (908)
21785 ++||++++|+||++++|++++.++..++.++++.++.+++++++++++++++|+.++|+..........+ .+....
21786 T Consensus 513 l~~~~l~~k~~ri~~if~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~il~~w~~~~p~~~~~~~~~~~~~~~~~~~~~~ 592 (762)
21787 T 6UO8_A 513 LGYGSMFTKIWWVHTVFTKKEEKKEWRKTLEPWKLYATVGLLVGMDVLTLAIWQIVDPLHRTIETFAKEEPKEDIDVSIL 592 (762)
21788 T ss_dssp HHHHHHHHHHHHHHHTTSCCSSCTTCSSCSSTHHHHHHHHHHHHHHHHHHHHHHHSSCCCCEEEECCCCCCCSSSSCCEE
21789 T ss_pred HHHhhhhhcceEEEEEeecccccchhhcccCHHHHHHHHHHHHHHHHHHHHHHHHhCcccceeeecccCCCCccCCceEe
21790 Confidence 9999999999999999997654322244678899999999999999999999999999976543211000 000012
21791
21792
21793 Q NP_000836.2 737 RGVLKCDISD--LSLICSLGYSILLMVTCTVYAIKTRGVP-ETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSAEKMYI 813 (908)
21794 Q Consensus 737 ~~~~~C~~~~--~~~~~~~~~~~~ll~~~~~la~~~R~~~-~~~nes~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (908)
21795 .....|.+.+ .|++++++|+++|++++++|||++|++| ++|||+|+|++++|+++++|++++++++.....+ ..
21796 T Consensus 593 ~~~~~C~~~~~~~~~~~~~~~~~~ll~~~~~la~~tr~~~~~~~nes~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 669 (762)
21797 T 6UO8_A 593 PQLEHCSSRKMNTWLGIFYGYKGLLLLLGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQ---DA 669 (762)
21798 T ss_dssp EEEEECCCSCCTTHHHHHHHHHHHHHHHHHHHHHSCCSCCSSCSSHHHHHHHHHHHHHHHHHHHHHHHTTCCCTT---TS
21799 T ss_pred ceeeeeecCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCh---hH
21800 Confidence 2356999864 7888999999999999999999999999 9999999999999999999999999987665432 35
21801
21802
21803 Q NP_000836.2 814 QTTTLTVSMSLSASVSLGMLYMPKVYIIIFHPEQNVQKRKRSF 856 (908)
21804 Q Consensus 814 ~~~~~~~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~~~~~ 856 (908)
21805 .+.+.+++++++++++|+++|+||+|.++++++.+......++
21806 T Consensus 670 ~~~~~~~~i~~~~~~~l~~~f~Pk~~~~~~~~~~~~~~~~~~~ 712 (762)
21807 T 6UO8_A 670 AFAFASLAIVFSSYITLVVLFVPKMRRLITRGEWQSEAQDTMK 712 (762)
21808 T ss_dssp HHHHHHHHHHHHHHHHHHHHHSHHHHHHHC-------------
21809 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhcc
21810 Confidence 6678889999999999999999999999999988776554443
21811
21812
21813 No 7
21814 >6UO8_B Gamma-aminobutyric acid type B receptor; G protein-coupled receptor, GABA, GABAB; HET: BMA, QDA, NAG;{Homo sapiens}
21815 Probab=100.00 E-value=2.2e-64 Score=602.93 Aligned_cols=675 Identities=21% Similarity=0.307 Sum_probs=484.0 Template_Neff=10.500
21816
21817 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
21818 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
21819 ....+++++||+++|.++.... ...+.....|+++|++++|+++ .++|+++++.+.|+++++..+.+.+.+
21820 T Consensus 9 ~~~~~~~i~Ig~l~p~~~~~~~--------~~~g~~~~~a~~~Av~~iN~~~-~l~~~~l~~~~~D~~~~~~~a~~~~~~ 79 (779)
21821 T 6UO8_B 9 PPPSSPPLSIMGLMPLTKEVAK--------GSIGRGVLPAVELAIEQIRNES-LLRPYFLDLRLYDTECDNAKGLKAFYD 79 (779)
21822 T ss_dssp ----CCEEEEEEECCCCSSSSS--------SHHHHHHHHHHHHHHHHHHTTC-SSTTSEEEEEEECCTTCHHHHHHHHHH
21823 T ss_pred CCCCCCCeEEEEEEEcCccccC--------CcccccHHHHHHHHHHHHHhcc-CCCCcEEEEEEecCCCChHHHHHHHHH
21824 Confidence 4566789999999999875310 0245678899999999999875 456899999999998876544433333
21825
21826
21827 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
21828 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
21829 ++.. .+++++++|+.++..+.+++.+++.+++|+|+++++++.++++..+++++|+.|+
21830 T Consensus 80 l~~~---------------------~~~v~~viG~~~s~~~~~va~~~~~~~ip~is~~ats~~ls~~~~~p~~~rt~ps 138 (779)
21831 T 6UO8_B 80 AIKY---------------------GPNHLMVFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADKKKYPYFFRTVPS 138 (779)
21832 T ss_dssp HHHT---------------------SCCEEEEEECCSTTHHHHHHTTCTTTTCCEEESSCCCGGGGCTTSCTTEEESSCC
21833 T ss_pred HHHh---------------------CCCEEEEEecCChHHHHHHHHHcCccCCEEEecccCChhHcCcccCCCceecCCC
21834 Confidence 3221 1368899999988888888999999999999999988888876678999999999
21835
21836
21837 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
21838 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
21839 +..+++++++++++++|++|++++++++++....+.+++.+++. ++++.....++ .+..+.++++++ .++++|
21840 T Consensus 139 ~~~~~~a~~~~l~~~~W~~v~ii~~~~~~~~~~~~~~~~~~~~~-gi~v~~~~~~~-----~d~~~~l~~l~~-~~~~iI 211 (779)
21841 T 6UO8_B 139 DNAVNPAILKLLKHYQWKRVGTLTQDVQRFSEVRNDLTGVLYGE-DIEISDTESFS-----NDPCTSVKKLKG-NDVRII 211 (779)
21842 T ss_dssp TTSSHHHHHHHHTTTTCCCEEEEECSSSHHHHHHHHHHHHTSSS-SCCEEEEEECS-----SCGGGTHHHHHH-TTCCEE
21843 T ss_pred HhhhcHHHHHHHHHcCCCEEEEEEecchhHHHHHHHHHHHHHhC-CcEEEeeeeec-----CChhHHHHHHhh-CCcEEE
21844 Confidence 99999999999999999999999988888888888888877765 46665443332 234556777763 588998
21845
21846
21847 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVY-------------QQEEIAEGAVTILPKRASIDGFDRY 344 (908)
21848 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (908)
21849 ++......+..+++++++.|+.+ +++|+..+ |........ ......+|.+.+.........+..+
21850 T Consensus 212 v~~~~~~~~~~~l~~a~~~g~~~~~~~wi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 290 (779)
21851 T 6UO8_B 212 LGQFDQNMAAKVFCCAYEENMYGSKYQWIIPG-WYEPSWWEQVHTEANSSRCLRKNLLAAMEGYIGVDFEPLSSKQIKTI 290 (779)
21852 T ss_dssp EEECCHHHHHHHHHHHHHTTCCSTTCEEEEEC-CCCTTTTTTSCSSSCCTTSCSHHHHTTSCSCEEEEECSSCSSCCCCS
21853 T ss_pred EEeCCHHHHHHHHHHHHHcCCCCCcEEEEeec-CCCcchhHhhcccccCCCccHHHHHHHHCCceeeEecCCCCCCcccc
21854 Confidence 88877777888999998888754 57788764 322110000 0111223333222111000000000
21855
21856
21857 Q NP_000836.2 345 FRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLC 424 (908)
21858 Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~ 424 (908)
21859 ......+ |.+.+.+... ...+..++.++|||++++++|++++....+
21860 T Consensus 291 ----------~~~~~~~-~~~~~~~~~~----------------------~~~~~~~~~~~yDAv~~~a~al~~~~~~~~ 337 (779)
21861 T 6UO8_B 291 ----------SGKTPQQ-YEREYNNKRS----------------------GVGPSKFHGYAYDGIWVIAKTLQRAMETLH 337 (779)
21862 T ss_dssp ----------SSSCHHH-HHHHHHHHSS----------------------SCCCCSCSSTTHHHHHHHHHHHHHHHSSSC
21863 T ss_pred ----------CCCCHHH-HHHHHHhhcC----------------------CCCccccchHHHHHHHHHHHHHHHHHHHHH
21864 Confidence 0000111 1111211000 012345678899999999999999875432
21865
21866
21867 Q NP_000836.2 425 PGY----IGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLH---L 497 (908)
21868 Q Consensus 425 ~~~----~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~---~ 497 (908)
21869 ... ...+.......+..+.+++++.+|.|.+| ++.|| +|++...+.+.+++ ++.++.||.|+.... +
21870 T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~f~G~sG-~v~f~-~g~r~~~~~i~~~~----~~~~~~vg~~~~~~~~l~~ 411 (779)
21871 T 6UO8_B 338 ASSRHQRIQDFNYTDHTLGRIILNAMNETNFFGVTG-QVVFR-NGERMGTIKFTQFQ----DSREVKVGEYNAVADTLEI 411 (779)
21872 T ss_dssp SHHHHHTTSCCCSCCHHHHHHHHHHHHCCCCBCSSS-BCEEE-TTEEECEEEEEEEC----SSSEEEEEEEESSSCCEEE
21873 T ss_pred hcCCCCCHHHcCCCCHHHHHHHHHHHHcCCccccce-eEEEe-CCceecEEEEEEEe----CCeEEEEEEEECCCCeEEE
21874 Confidence 110 00010111224556778888889999988 89999 89998889999988 257899999986521 1
21875
21876
21877 Q NP_000836.2 498 KVEDMQWAHREHTHPASVCSLPCKPGERKKTVKGVPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKL 577 (908)
21878 Q Consensus 498 ~~~~i~w~~~~~~~p~s~Cs~~c~~G~~k~~~~~~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~~ 577 (908)
21879 +...+.|.+ |. +|.+ ++.| .....
21880 T Consensus 412 ~~~~~~~~~----------------~~-------------------------------~P~d------~~~~---~~~~~ 435 (779)
21881 T 6UO8_B 412 INDTIRFQG----------------SE-------------------------------PPKD------KTII---LEQLR 435 (779)
21882 T ss_dssp CTTTCCCSS----------------SS-------------------------------CCCS------SCCE---EEEEC
21883 T ss_pred ecccceeCC----------------CC-------------------------------CCCC------Ccee---eeecc
21884 Confidence 111223321 10 2333 3333 23333
21885
21886
21887 Q NP_000836.2 578 EWHSPWAVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFLMIAAPD-------TIICSF 650 (908)
21888 Q Consensus 578 ~~s~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~~~~~~l~G~~l~~~~~~~~~~~~~-------~~~C~~ 650 (908)
21889 .++.++.+++.+++++|++++++++++++++|+++.+|++++.+++++|+|++++|++++++++.++ ...|.+
21890 T Consensus 436 ~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~r~~~~ik~s~~~~~~~il~g~~l~~~~~~~~~~~~~~~~~~~~~~~C~~ 515 (779)
21891 T 6UO8_B 436 KISLPLYSILSALTILGMIMASAFLFFNIKNRNQKLIKMSSPYMNNLIILGGMLSYASIFLFGLDGSFVSEKTFETLCTV 515 (779)
21892 T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSTTCTTCCHHHHHHHHHHHHHHHHHHHHHCCCTTTTTTTSHHHHHHH
21893 T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHh
21894 Confidence 5677788888899999999999888999999999999999999999999999999999999887775 689999
21895
21896
21897 Q NP_000836.2 651 RRVFLGLGMCFSYAALLTKTNRIHRIFEQGKKSVTAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRT 730 (908)
21898 Q Consensus 651 ~~~~~~~gf~l~~~~l~~K~~ri~~if~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~~~~ 730 (908)
21899 |.|++++||+++||+|++|+||++++|++.+.+ ++.++++.++.+++++++++++++++|++++|+...........
21900 T Consensus 516 ~~~~~~~gf~l~~~~l~~K~~ri~~if~~~~~~---~~~~~~~~l~~~~~~~~~i~~~il~~w~~~~p~~~~~~~~~~~~ 592 (779)
21901 T 6UO8_B 516 RTWILTVGYTTAFGAMFAKTWRVHAIFKNVKMK---KKIIKDQKLLVIVGGMLLIDLCILICWQAVDPLRRTVEKYSMEP 592 (779)
21902 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCCC-----CCCSCSSHHHHHHHHHHHHHHHHHHTTTTTCCCCCCCEECCCCC
21903 T ss_pred HHHHHHHHHHHHHHHhHHHHHhHHhHhcccccc---CcccCHHHHHHHHHHHHHHHHHHHHHHHHhCcccceeeeeecCC
21904 Confidence 999999999999999999999999999876543 34678888999999999999999999999999876532110000
21905
21906
21907 Q NP_000836.2 731 ----LDPEKARGVLKCDIS--DLSLICSLGYSILLMVTCTVYAIKTRGVP-ETFNEAKPIGFTMYTTCIIWLAFIPIFFG 803 (908)
21908 Q Consensus 731 ----~~~~~~~~~~~C~~~--~~~~~~~~~~~~~ll~~~~~la~~~R~~~-~~~nes~~i~~~~~~~~~~~~~~~~~~~~ 803 (908)
21909 .+.........|.+. ..|++++++|+++|+++|++|||++|++| ++|||+|+|++++|+++++|+++++++++
21910 T Consensus 593 ~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~y~~~ll~~~~~la~~~r~~~~~~~nes~~i~~~~~~~~~~~~~~~~~~~~ 672 (779)
21911 T 6UO8_B 593 DPAGRDISIRPLLEHCENTHMTIWLGIVYAYKGLLMLFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFL 672 (779)
21912 T ss_dssp CCSSCCCEEEEEECCCCCTTTTSSSHHHHHHHHHHHHHHHHHHHHHHTSCCCTTSCSSHHHHHHHHHHHHHHHHHHHHTT
21913 T ss_pred CCCCCCceEeeeEeeecCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhcchhHHHHHHHHHHHHHHHHHHHHHH
21914 Confidence 000012345799885 37888999999999999999999999999 99999999999999999999999999876
21915
21916
21917 Q NP_000836.2 804 TAQSAEKMYIQTTTLTVSMSLSASVSLGMLYMPKVYIIIFHPEQNVQKR 852 (908)
21918 Q Consensus 804 ~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~ 852 (908)
21919 ....+ ...+.+.+++++++++++|+++|+||+|.++++|+.+...+
21920 T Consensus 673 ~~~~~---~~~~~~~~~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~ 718 (779)
21921 T 6UO8_B 673 TRDQP---NVQFCIVALVIIFCSTITLCLVFVPKLITLRTNPDAATQNR 718 (779)
21922 T ss_dssp CCSCT---TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------
21923 T ss_pred hcCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhcc
21924 Confidence 65432 35567888999999999999999999999999998876644
21925
21926
21927 No 8
21928 >7C7Q_A Gamma-aminobutyric acid type B receptor; GABAB, Cryo-EM, GPCR, active, PAM; HET: FN0, 2C0, NAG;{Homo sapiens}
21929 Probab=100.00 E-value=3.4e-62 Score=592.43 Aligned_cols=685 Identities=20% Similarity=0.285 Sum_probs=475.7 Template_Neff=10.600
21930
21931 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
21932 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
21933 ....++++||+++|.+++. ..+.....|+++|++++|+++++++|+++++.+.|+++++..+.+.+.+
21934 T Consensus 166 ~~~~~~i~Ig~l~p~~~~~-----------~~~~~~~~a~~~Av~~iN~~~~il~~~~l~l~~~D~~~~~~~a~~~~~~- 233 (879)
21935 T 7C7Q_A 166 HSERRAVYIGALFPMSGGW-----------PGGQACQPAVEMALEDVNSRRDILPDYELKLIHHDSKCDPGQATKYLYE- 233 (879)
21936 T ss_dssp --CCEEEEEEEECCCSSSC-----------CTHHHHHHHHHHHHHHHHHCTTTCSSEEEEEEEECCTTCHHHHHHHHHH-
21937 T ss_pred CccCCceEEEeEecCCCCC-----------CCccchHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCCCChHHHHHHHHH-
21938 Confidence 3456889999999998743 1356678999999999999888888999999999998876544333333
21939
21940
21941 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
21942 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
21943 ++. ++++++++|+.++..+..++.+++..++|+|++.++++.++++..+++++|+.|++
21944 T Consensus 234 ---l~~------------------~~~v~~viG~~~s~~~~~~a~~~~~~~ip~is~~a~s~~ls~~~~~~~~~r~~ps~ 292 (879)
21945 T 7C7Q_A 234 ---LLY------------------NDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 292 (879)
21946 T ss_dssp ---HHT------------------SSSCEEEEEECSHHHHHHHHHHGGGTTCEEEESSCCCGGGGCTTTSTTEEESSCCG
21947 T ss_pred ---HHh------------------CCCeEEEEEcCChHHHHHHHHHHHhcCCEEEecccCChhhhccccCCceEEcCCCh
21948 Confidence 322 15788999998888777888899999999999998877777666789999999999
21949
21950
21951 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
21952 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
21953 ..+++++++++++++|++|++++++++++....+.+++.+++. ++++.....+. .+....++++++ .++|+|+
21954 T Consensus 293 ~~~~~a~~~~l~~~~w~~v~ii~~~~~~g~~~~~~~~~~~~~~-gi~v~~~~~~~-----~~~~~~l~~l~~-~~~~vIv 365 (879)
21955 T 7C7Q_A 293 TLHNPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERVKEA-GIEITFRQSFF-----SDPAVPVKNLKR-QDARIIV 365 (879)
21956 T ss_dssp GGHHHHHHHHHHHTTCCEEEEEEESCHHHHHHHHHHHHHHHHH-TCEEEEEEEES-----SCCHHHHHHHHH-TTCCEEE
21957 T ss_pred hhccHHHHHHHHHhCCCEEEEEEECCCcchHHHHHHHHHHHHc-CcEEEEEeccc-----CCchHHHHHHHh-CCCEEEE
21958 Confidence 9999999999989999999999988888888888888888775 46765443332 133455666763 5889998
21959
21960
21961 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQSG-HFLWIGSD----SWGSKIAP-----VYQQEEIAEGAVTILPKRASIDGFDRYFRSRT 349 (908)
21962 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~----~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 349 (908)
21963 +......+..+++++++.|+.+ ++.|+..+ .|...... ........+|.+....... ...
21964 T Consensus 366 ~~~~~~~~~~~l~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---------~~~- 435 (879)
21965 T 7C7Q_A 366 GLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIYDPSINCTVDEMTEAVEGHITTEIVML---------NPA- 435 (879)
21966 T ss_dssp EECCHHHHHHHHHHHHHHTCCSSSCEEEEETTSCTTTTTSCCTTCCSCHHHHHHHSSSCEEEEECCS---------CCS-
21967 T ss_pred EecCHHHHHHHHHHHHHcccCCCCEEEEEecccccccccccCCCCCCCHHHHHHHHcCcEEEEeecc---------CCC-
21968 Confidence 8877777888999998888754 46777653 22211000 0000112223222111000 000
21969
21970
21971 Q NP_000836.2 350 LANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYI- 428 (908)
21972 Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~- 428 (908)
21973 ......+.++.++++++... .... + . ......++..+|||++++++|++++....+....
21974 T Consensus 436 ~~~~~~~~~~~~f~~~~~~~-~~~~---~----~-----------~~~~~~~~~~~yDAv~~~a~Al~~~~~~~~~~~~~ 496 (879)
21975 T 7C7Q_A 436 NTRSISNMTSQEFVEKLTKR-LKRH---P----E-----------ETGGFQEAPLAYDAIWALALALNKTSGGGGRSGVR 496 (879)
21976 T ss_dssp CCCCTTSCCHHHHHHHHHHH-SSSC---G----G-----------GSTTTTSHHHHHHHHHHHHHHHHHTC--------C
21977 T ss_pred CCcccCCCCHHHHHHHHHHH-HhcC---C----c-----------cCCCCcccchHHHHHHHHHHHHHHHhcccccCCCC
21978 Confidence 00000122333333322111 1000 0 0 0112345778999999999999998754321100
21979
21980
21981 Q NP_000836.2 429 GLCPR-MSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAHR 507 (908)
21982 Q Consensus 429 ~~~~~-~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~~~ 507 (908)
21983 ..+.. .....++.+.++|++.+|.|.+| ++.||++|++...+.+.+++ ++.++.+|.|+.... .+.|...
21984 T Consensus 497 ~~~~~~~~~~~~~~l~~~l~~~~f~G~~G-~v~fd~~G~r~~~~~i~~~~----~~~~~~vg~~~~~~~----~~~~~~~ 567 (879)
21985 T 7C7Q_A 497 LEDFNYNNQTITDQIYRAMNSSSFEGVSG-HVVFDASGSRMAWTLIEQLQ----GGSYKKIGYYDSTKD----DLSWSKT 567 (879)
21986 T ss_dssp CTTCCTTCCHHHHHHHHHHHTCEEEETTE-EEECCSSCCCCCEEEEEEEC----SSSEEEEEEEETTTT----EEEECSC
21987 T ss_pred HHHCCCCCHHHHHHHHHHHHcCcccccee-eEEeCCCCCccceEEEEEEe----CCEEEEEEEEECCCC----ceeeccC
21988 Confidence 00000 01123456778888889999988 89999999998888888887 357899999986521 2344211
21989
21990
21991 Q NP_000836.2 508 EHTHPASVCSLPCKPGERKKTVKGVPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWHSPWAVVP 587 (908)
21992 Q Consensus 508 ~~~~p~s~Cs~~c~~G~~k~~~~~~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~~~~s~~~~~~~ 587 (908)
21993 ..|+.|. +|.+ .+.| ...+..++..+.+++
21994 T Consensus 568 ----------~~w~~g~-------------------------------~p~~------~~~~---~~~~~~~~~~~~i~~ 597 (879)
21995 T 7C7Q_A 568 ----------DKWIGGS-------------------------------PPAD------QTLV---IKTFRFLSQKLFISV 597 (879)
21996 T ss_dssp ----------CCCTTSS-------------------------------CCCS------SCCE---EEEECCCCHHHHHHH
21997 T ss_pred ----------CccCCCC-------------------------------CCcc------ccee---eeecchhCHHHHHHH
21998 Confidence 1222221 2333 3333 233445556777888
21999
22000
22001 Q NP_000836.2 588 VFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFL------MIAAP-DTIICSFRRVFLGLGMC 660 (908)
22002 Q Consensus 588 ~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~~~~~~l~G~~l~~~~~~~------~~~~~-~~~~C~~~~~~~~~gf~ 660 (908)
22003 .++++++++++++++++++++|+++.+|++++.+++++|+|++++|+++++ ++..| +...|.+|.|++++||+
22004 T Consensus 598 ~~~~~~~i~~~~~~~~~~~~~r~~~~i~~~~~~l~~~il~g~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~f~ 677 (879)
22005 T 7C7Q_A 598 SVLSSLGIVLAVVCLSFNIYNSHVRYIQNSQPNLNNLTAVGCSLALAAVFPLGLDGYHIGRNQFPFVCQARLWLLGLGFS 677 (879)
22006 T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSSGGGGSCHHHHHHHHHHHHHHHHTHHHHHCCTTTSCSTTTHHHHHHHHHHHHHHHH
22007 T ss_pred HHHHHHHHHHHHHHHHHHHHcccChhHhccCHHHHHHHHHHHHHHHHHHHHhcCCccCCCccchhHHHHHHHHHHHHhHH
22008 Confidence 888999998888888889999999999999999999999999999999986 34445 68899999999999999
22009
22010
22011 Q NP_000836.2 661 FSYAALLTKTNRIHRIFEQGKKSVTAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRT----LDPEKA 736 (908)
22012 Q Consensus 661 l~~~~l~~K~~ri~~if~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~~~~----~~~~~~ 736 (908)
22013 ++||+|++|+||++++|++++.++.+++.++++.++.++++++++|++++++|++++|+..........+ .+....
22014 T Consensus 678 l~~~~l~~K~~ri~~if~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~il~~w~~~~p~~~~~~~~~~~~~~~~~~~~~~ 757 (879)
22015 T 7C7Q_A 678 LGYGSMFTKIWWVHTVFTKKEEKKEWRKTLEPWKLYATVGLLVGMDVLTLAIWQIVDPLHRTIETFAKEEPKEDIDVSIL 757 (879)
22016 T ss_dssp HHHSTTTHHHHHHHHHCC-----------CCTTHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEEECCCCCCTTSSSCEEE
22017 T ss_pred HHHHHHhccceEEEEEeecccccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCcccceeeecccCCCCcCCCeeEe
22018 Confidence 9999999999999999997654322234678888999999999999999999999999976543211000 000012
22019
22020
22021 Q NP_000836.2 737 RGVLKCDISD--LSLICSLGYSILLMVTCTVYAIKTRGVP-ETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSAEKMYI 813 (908)
22022 Q Consensus 737 ~~~~~C~~~~--~~~~~~~~~~~~ll~~~~~la~~~R~~~-~~~nes~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (908)
22023 .....|.+.+ .+++++++|+++|++++++|||++|++| ++|||+|+|++++|+++++|+++++++++..... ..
22024 T Consensus 758 ~~~~~C~~~~~~~~~~~~~~~~~~ll~~~~~la~~tR~~~~~~~nesk~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 834 (879)
22025 T 7C7Q_A 758 PQLEHCSSRKMNTWLGIFYGYKGLLLLLGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQ---DA 834 (879)
22026 T ss_dssp EEEEEEECSSCSSHHHHHHHHHHHHHHHHHHHHHHTSSCCCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHSTTCH---HH
22027 T ss_pred ceEeEeecCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCh---HH
22028 Confidence 2367999864 6778899999999999999999999999 9999999999999999999999999987665432 24
22029
22030
22031 Q NP_000836.2 814 QTTTLTVSMSLSASVSLGMLYMPKVYIIIFHPEQNVQKRKRS 855 (908)
22032 Q Consensus 814 ~~~~~~~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~~~~ 855 (908)
22033 .+.+.+++++++++++|+++|+||+|.++++++++..++...
22034 T Consensus 835 ~~~~~~~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~~~~ 876 (879)
22035 T 7C7Q_A 835 AFAFASLAIVFSSYITLVVLFVPKMRRLITEVLFQGPHHHHH 876 (879)
22036 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------
22037 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCC
22038 Confidence 566888999999999999999999999999998887665443
22039
22040
22041 No 9
22042 >2E4U_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve; HET: GLU, NAG; 2.35A {Rattus norvegicus}
22043 Probab=100.00 E-value=1.2e-43 Score=406.76 Aligned_cols=535 Identities=46% Similarity=0.875 Sum_probs=346.7 Template_Neff=11.200
22044
22045 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
22046 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
22047 ...+++++||+++|.++.......|+......+.....|+++|++++|+++++++|+++++.+.|++++...+.+.+.++
22048 T Consensus 9 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~g~~~~~a~~~Av~~iN~~~~~l~~~~l~~~~~D~~~~~~~a~~~~~~~ 88 (555)
22049 T 2E4U_A 9 IKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDNYLLPGVKLGVHILDTCSRDTYALEQSLEF 88 (555)
22050 T ss_dssp EEECCSEEEEEEECCEEECCTTCSEEEECCCCCCCHHHHHHHHHHHHHHCTTSSTTCCEEEEEEECTTCHHHHHHHHHHH
22051 T ss_pred eEecCCEEEEeeecceecCCCCCCccccccccCHHHHHHHHHHHHHHhcCCCCCCCCeeeEEEeeCCCCHHHHHHHHHHH
22052 Confidence 45578999999999987543233455333345677889999999999999888889999999999988765544444443
22053
22054
22055 Q NP_000836.2 120 VQALIEK-DASDVKCANGDPPIFTK-PDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
22056 Q Consensus 120 ~~~l~~~-~~~~~~~~~~~~~~~~~-~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
22057 +...... ......|....+.+... ..+++++||+.++..+..++.++..+++|+|++++.++.++++..+++++++.|
22058 T Consensus 89 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~viG~~~s~~~~~~~~~~~~~~ip~is~~~~~~~l~~~~~~~~~~r~~p 168 (555)
22059 T 2E4U_A 89 VRASLTKVDEAEYMCPDGSYAIQENIPLLIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVP 168 (555)
22060 T ss_dssp HHTTC--------------------CCCCEEEEEECSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTCTTEEESSC
22061 T ss_pred HHHhccCcccccccCCCCCcccccCCCCcEEEEEcCCChHHHHHHHHHhHhhCCCEEecCcCCcccCCCCcCCCccccCC
22062 Confidence 3210000 00000000000000000 035789999988888888889999999999999887777766556899999999
22063
22064
22065 Q NP_000836.2 198 PDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARA 277 (908)
22066 Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v 277 (908)
22067 ++..+++++++++++++|++|++|+.+++++....+.+.+.+++. ++++.....++......++...++++++..++++
22068 T Consensus 169 ~~~~~~~~l~~~l~~~~w~~v~~i~~~~~~g~~~~~~~~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 247 (555)
22069 T 2E4U_A 169 PDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLR-NICIATAEKVGRSNIRKSYDSVIRELLQKPNARV 247 (555)
22070 T ss_dssp CHHHHHHHHHHHHHHTTCCEEEEEEESSTTHHHHHHHHHHHHHTT-TCEEEEEEEECTTCCHHHHHHHHHHHHTCTTCCE
22071 T ss_pred CHHHHHHHHHHHHHHcCCCEEEEEEEcCcchHHHHHHHHHHHHHC-CCEEEEEEEeccccccccHHHHHHHHHhCCCccE
22072 Confidence 999999999999999999999999988888888888888887765 4666543333211112345555666632247888
22073
22074
22075 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNV 357 (908)
22076 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (908)
22077 |++.+....+..+++++.+.|+ ++.|++.+.|...............+.+.+.......++|..|+....+...+.+.
22078 T Consensus 248 vv~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~f~~fl~~~~~~~~~~~~ 325 (555)
22079 T 2E4U_A 248 VVLFMRSDDSRELIAAANRVNA--SFTWVASDGWGAQESIVKGSEHVAYGAITLELASHPVRQFDRYFQSLNPYNNHRNP 325 (555)
22080 T ss_dssp EEEECCHHHHHHHHHHHHHTTC--CCEEEECTTTTTCGGGTTTCHHHHTTCEEEEECCCCCHHHHHHHHTCCTTTCTTCT
22081 T ss_pred EEEECCHHHHHHHHHHHHHcCC--CeEEEEeCcccccchhhcCCcceeceEEEEEEcCCCCccHHHHHHhCCCCcCCCCH
22082 Confidence 8888777778888888887776 36788876665432110001123344444443333334455444332222223455
22083
22084
22085 Q NP_000836.2 358 WFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTI 437 (908)
22086 Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~ 437 (908)
22087 ++.++|++.++|..... ......|+..+..... ......++.++||||+++|+||+++....+......|......
22088 T Consensus 326 ~~~~~~~~~~~c~~~~~---~~~~~~c~~~~~~~~~-~~~~~~~~~~~ydAv~~~a~aL~~~~~~~~~~~~~~c~~~~~~ 401 (555)
22089 T 2E4U_A 326 WFRDFWEQKFQCSLQNK---RNHRQVCDKHLAIDSS-NYEQESKIMFVVNAVYAMAHALHKMQRTLCPQTTKLCDAMKIL 401 (555)
22090 T ss_dssp THHHHHHHHTTCCCC---------CCCCTTCCCCTT-TCCCCTTHHHHHHHHHHHHHHHHHHHHHHCTTCSSCCGGGTSC
22091 T ss_pred HHHHHHHHHcCCccCCc---cCCCcccCCCcccCCC-CccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhhccc
22092 Confidence 67777777666532110 0011123322111100 0122345678999999999999998764332111122211111
22093
22094
22095 Q NP_000836.2 438 DGKE-LLGYIRAVNFN-------GSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAHREH 509 (908)
22096 Q Consensus 438 ~~~~-l~~~l~~~~f~-------G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~~~~~ 509 (908)
22097 ++.. +.+.|++..|. |.+| .+.||++|++...|.|++++..++...++.||.|+....++...+.|.++
22098 T Consensus 402 ~~~~~~~~~l~~~~f~~~~~~~~g~~g-~v~fd~~G~~~~~~~i~~~~~~~~~~~~~~vg~~~~~~~~~~~~i~W~~~-- 478 (555)
22099 T 2E4U_A 402 DGKKLYKEYLLKIQFTAPFNPNKGADS-IVKFDTFGDGMGRYNVFNLQQTGGKYSYLKVGHWAETLSLDVDSIHWSRN-- 478 (555)
22100 T ss_dssp CHHHHHHHHTTCEEECCSSSCCSSSCC-EEECCTTSCCCCCEEEEEEECTTSSCEEEEEEEESSSEECCGGGCCCTTS--
22101 T ss_pred ChhHHHHHHHHhCcccCCCCCCCCCCC-eeEeCCCCCCCceEEEEEEEeeCCeEEEEEEEEeCCcEEEecccccccCC--
22102 Confidence 2232 44677777773 6677 89999999998889999887432223688999998654344346889753
22103
22104
22105 Q NP_000836.2 510 THPASVCSLPCKPGERKKTVKGVPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWHSPWA 584 (908)
22106 Q Consensus 510 ~~p~s~Cs~~c~~G~~k~~~~~~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~~~~s~~~~ 584 (908)
22107 ..|.++|+.+|++|++|...+++.|||+|..|++++++++.++|.+||.++|||.+++.|.+++..|+.|.+++.
22108 T Consensus 479 ~~P~s~Cs~~C~~G~~k~~~~~~~Cc~~C~~C~~~~~~~~~~~C~~Cp~~~~~n~~~~~C~~~~~~~L~~~~~~~ 553 (555)
22109 T 2E4U_A 479 SVPTSQCSDPCAPNEMKNMQPGDVCCWICIPCEPYEYLVDEFTCMDCGPGQWPTADLSGCYNLPEDYIKWEDALV 553 (555)
22110 T ss_dssp SCCCCCSSCCCCTTTEEEECCSSSSCCEEEECCTTEEEEETTEEEECCTTEEECTTSSSEEECCC----------
22111 T ss_pred CCCcceeeCCCCCCceeecCCCCcccceeeecccceeecCceeecCCCCCcccCCCCCCeEeccccccCcccCCC
22112 Confidence 568999999999999988766678999999999999998789999999999999999999999999999887653
22113
22114
22115 No 10
22116 >2E4X_B Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve; HET: C5B, NAG; 2.75A {Rattus norvegicus}
22117 Probab=100.00 E-value=1.2e-43 Score=406.76 Aligned_cols=535 Identities=46% Similarity=0.875 Sum_probs=347.2 Template_Neff=11.200
22118
22119 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
22120 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
22121 ...+++++||+++|.++.......|+......+.....|+++|++++|+++++++|+++++.+.|++++...+.+.+.++
22122 T Consensus 9 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~g~~~~~a~~~Av~~iN~~~~~l~~~~l~~~~~D~~~~~~~a~~~~~~~ 88 (555)
22123 T 2E4X_B 9 IKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDNYLLPGVKLGVHILDTCSRDTYALEQSLEF 88 (555)
22124 T ss_dssp EEECCSEEEEEEECCEEECCTTCSEEEECCCCCCCHHHHHHHHHHHHTTCSSSSTTCCEEEEEEECTTCHHHHHHHHHHH
22125 T ss_pred eEecCCEEEEeeecceecCCCCCCccccccccCHHHHHHHHHHHHHHhcCCCCCCCCeeeEEEeeCCCCHHHHHHHHHHH
22126 Confidence 45578999999999987543233455333345677889999999999999888889999999999988765544444443
22127
22128
22129 Q NP_000836.2 120 VQALIEK-DASDVKCANGDPPIFTK-PDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
22130 Q Consensus 120 ~~~l~~~-~~~~~~~~~~~~~~~~~-~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
22131 +...... ......|....+.+... ..+++++||+.++..+..++.++..+++|+|++++.++.++++..+++++++.|
22132 T Consensus 89 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~viG~~~s~~~~~~~~~~~~~~ip~is~~~~~~~l~~~~~~~~~~r~~p 168 (555)
22133 T 2E4X_B 89 VRASLTKVDEAEYMCPDGSYAIQENIPLLIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVP 168 (555)
22134 T ss_dssp HHHTC--------------------CCCCEEEEEECSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTCTTEEESSC
22135 T ss_pred HHHhccCcccccccCCCCCcccccCCCCcEEEEEcCCChHHHHHHHHHhHhhCCCEEecCcCCcccCCCCcCCCccccCC
22136 Confidence 3210000 00000000000000000 035789999988888888889999999999999887777766556899999999
22137
22138
22139 Q NP_000836.2 198 PDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARA 277 (908)
22140 Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v 277 (908)
22141 ++..+++++++++++++|++|++|+.+++++....+.+.+.+++. ++++.....++......++...++++++..++++
22142 T Consensus 169 ~~~~~~~~l~~~l~~~~w~~v~~i~~~~~~g~~~~~~~~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 247 (555)
22143 T 2E4X_B 169 PDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLR-NICIATAEKVGRSNIRKSYDSVIRELLQKPNARV 247 (555)
22144 T ss_dssp CHHHHHHHHHHHHHHTTCCEEEEEEESSTTHHHHHHHHHHHHHHT-TCEEEEEEEECTTCCHHHHHHHHHHHHTCTTCCE
22145 T ss_pred CHHHHHHHHHHHHHHcCCCEEEEEEEcCcchHHHHHHHHHHHHHC-CCEEEEEEEeccccccccHHHHHHHHHhCCCccE
22146 Confidence 999999999999999999999999988888888888888887765 4666543333211112345555666632247888
22147
22148
22149 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNV 357 (908)
22150 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (908)
22151 |++.+....+..+++++.+.|+ ++.|++.+.|...............+.+.+.......++|..|+....+...+.+.
22152 T Consensus 248 vv~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~f~~fl~~~~~~~~~~~~ 325 (555)
22153 T 2E4X_B 248 VVLFMRSDDSRELIAAANRVNA--SFTWVASDGWGAQESIVKGSEHVAYGAITLELASHPVRQFDRYFQSLNPYNNHRNP 325 (555)
22154 T ss_dssp EEEECCHHHHHHHHHHHHHTTC--CCEEEECTTTTTCSTTTTTCTTTSTTCEEEEECCCCCHHHHHHHHTCCTTTCTTCT
22155 T ss_pred EEEECCHHHHHHHHHHHHHcCC--CeEEEEeCcccccchhhcCCcceeceEEEEEEcCCCCccHHHHHHhCCCCcCCCCH
22156 Confidence 8888777778888888887776 36788876665432110001123344444443333334455444332222223455
22157
22158
22159 Q NP_000836.2 358 WFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTI 437 (908)
22160 Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~ 437 (908)
22161 ++.++|++.++|..... ......|+..+..... ......++.++||||+++|+||+++....+......|......
22162 T Consensus 326 ~~~~~~~~~~~c~~~~~---~~~~~~c~~~~~~~~~-~~~~~~~~~~~ydAv~~~a~aL~~~~~~~~~~~~~~c~~~~~~ 401 (555)
22163 T 2E4X_B 326 WFRDFWEQKFQCSLQNK---RNHRQVCDKHLAIDSS-NYEQESKIMFVVNAVYAMAHALHKMQRTLCPQTTKLCDAMKIL 401 (555)
22164 T ss_dssp THHHHHHHHTTCCSSSS---SSCCCCCCTTCCCCTT-TCCCCTTHHHHHHHHHHHHHHHHHHHHHHCCSCSSCCGGGSSC
22165 T ss_pred HHHHHHHHHcCCccCCc---cCCCcccCCCcccCCC-CccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhhccc
22166 Confidence 67777777666532110 0011123322111100 0122345678999999999999998764332111122211111
22167
22168
22169 Q NP_000836.2 438 DGKE-LLGYIRAVNFN-------GSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAHREH 509 (908)
22170 Q Consensus 438 ~~~~-l~~~l~~~~f~-------G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~~~~~ 509 (908)
22171 ++.. +.+.|++..|. |.+| .+.||++|++...|.|++++..++...++.||.|+....++...+.|.++
22172 T Consensus 402 ~~~~~~~~~l~~~~f~~~~~~~~g~~g-~v~fd~~G~~~~~~~i~~~~~~~~~~~~~~vg~~~~~~~~~~~~i~W~~~-- 478 (555)
22173 T 2E4X_B 402 DGKKLYKEYLLKIQFTAPFNPNKGADS-IVKFDTFGDGMGRYNVFNLQQTGGKYSYLKVGHWAETLSLDVDSIHWSRN-- 478 (555)
22174 T ss_dssp CHHHHHHHHTTCCEECTTTSCCSSSCC-EECCCSSSCCCCCEEEEEEECTTSSCEEEEEEEESSSEECCGGGCCCGGG--
22175 T ss_pred ChhHHHHHHHHhCcccCCCCCCCCCCC-eeEeCCCCCCCceEEEEEEEeeCCeEEEEEEEEeCCcEEEecccccccCC--
22176 Confidence 2232 44677777773 6677 89999999998889999887432223688999998654344346889753
22177
22178
22179 Q NP_000836.2 510 THPASVCSLPCKPGERKKTVKGVPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWHSPWA 584 (908)
22180 Q Consensus 510 ~~p~s~Cs~~c~~G~~k~~~~~~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~~~~s~~~~ 584 (908)
22181 ..|.++|+.+|++|++|...+++.|||+|..|++++++++.++|.+||.++|||.+++.|.+++..|+.|.+++.
22182 T Consensus 479 ~~P~s~Cs~~C~~G~~k~~~~~~~Cc~~C~~C~~~~~~~~~~~C~~Cp~~~~~n~~~~~C~~~~~~~L~~~~~~~ 553 (555)
22183 T 2E4X_B 479 SVPTSQCSDPCAPNEMKNMQPGDVCCWICIPCEPYEYLVDEFTCMDCGPGQWPTADLSGCYNLPEDYIKWEDALV 553 (555)
22184 T ss_dssp SCCCCCSSCCCCSSSCEEECCSSSSCCEEECCCTTEEEEETTEEEECCTTEEECTTSSSEEECCC----------
22185 T ss_pred CCCcceeeCCCCCCceeecCCCCcccceeeecccceeecCceeecCCCCCcccCCCCCCeEeccccccCcccCCC
22186 Confidence 568999999999999988766678999999999999998789999999999999999999999999999887653
22187
22188
22189 No 11
22190 >6N50_A Metabotropic glutamate receptor 5, Nanobody; Cell Surface Receptor, SIGNALING PROTEIN; HET: NAG, QUS; 3.751A {Homo sapiens}
22191 Probab=100.00 E-value=4.1e-43 Score=405.56 Aligned_cols=536 Identities=41% Similarity=0.786 Sum_probs=353.0 Template_Neff=10.900
22192
22193 Q NP_000836.2 36 YAHSIRVDGDIILGGLFPVHAKGE----RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTY 111 (908)
22194 Q Consensus 36 ~~~~~~~~~~i~Ig~l~p~~~~~~----~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~ 111 (908)
22195 .......+++++||+++|.++... ....|+......+.....|+++|++++|+++++++|+++++++.|+++++..
22196 T Consensus 42 ~~~~~~~~~~i~Ig~l~p~~~~~~~~~~~~~~cg~~~~~~g~~~~~a~~~Ai~~iN~~~~~l~~~~l~~~i~D~~~~~~~ 121 (596)
22197 T 6N50_A 42 RRVVAHMPGDIIIGALFSVHHQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDPTLLPNITLGCEIRDSCWHSAV 121 (596)
22198 T ss_pred cceeeEcCCCEEEEEEeecccCCCCCCCCcCCcccccccccHHHHHHHHHHHHHHHcCCCCCCCCeeEEEEEeCCCCHHH
22199 Confidence 334456789999999999985311 1234553222356778899999999999998888899999999999887655
22200
22201
22202 Q NP_000836.2 112 ALEQSLTFVQALIEKD---ASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTR 188 (908)
22203 Q Consensus 112 a~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~ 188 (908)
22204 +.+.+.+++....... .....|.+.++.+....++++++||+.++..+..++.++...++|+|++++.++.++++..
22205 T Consensus 122 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~aviG~~~s~~~~~~~~~~~~~~ip~is~~~~~~~ls~~~~ 201 (596)
22206 T 6N50_A 122 ALEQSIEFIRDSLISSEEEEGLVRCVDGSSSSFRSKKPIVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTL 201 (596)
22207 T ss_pred HHHHHHHHHhcCCCCccccccceecCCCCccccccCCCeeEEECCCChHHHHHHHHHHHHhCCCeeeccCCChhhCCCCC
22208 Confidence 5444444432100000 0000000000000011257889999988877778888899999999999887777666556
22209
22210
22211 Q NP_000836.2 189 YDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKR 268 (908)
22212 Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~ 268 (908)
22213 +++++++.|++..++.++++++++++|++|++|+.+++++....+.+++.+++. ++++.....+.......++...+++
22214 T Consensus 202 ~~~~~r~~p~~~~~~~al~~~l~~~~w~~v~ii~~~~~~g~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~ 280 (596)
22215 T 6N50_A 202 FKYFMRVVPSDAQQARAMVDIVKRYNWTYVSAVHTEGNYGESGMEAFKDMSAKE-GICIAHSYKIYSNAGEQSFDKLLKK 280 (596)
22216 T ss_pred CCcccccCCCHHHHHHHHHHHHHHhCCCEEEEEEecCccchHHHHHHHHHHHHC-CcEEEEEEEeCCCCCccchHHHHHH
22217 Confidence 899999999999999999999998999999999988788888888888888775 4666543322211122345566676
22218
22219
22220 Q NP_000836.2 269 LLE-TPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRS 347 (908)
22221 Q Consensus 269 l~~-~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (908)
22222 +++ ..+.++|++......+..+++++.+.|+.+++.|++.+.|...............+.+.+.......++|..|+..
22223 T Consensus 281 i~~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~I~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~f~~f~~~ 360 (596)
22224 T 6N50_A 281 LTSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFLLLGSDGWADRYDVTDGYQREAVGGITIKLQSPDVKWFDDYYLK 360 (596)
22225 T ss_pred HHHcCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEecCccccccccCCCccccccccccCCCCCCCCCHHHHHHh
22226 Confidence 653 1244555655556667788888888887544667777655432211000111233434443333334445555443
22227
22228
22229 Q NP_000836.2 348 RTLANNRRNVWFAEFWEENFGCKLGSHGKR-NSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG 426 (908)
22230 Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~ 426 (908)
22231 ..+...+.+.++.++|++.++|........ ..+...|+....... ......++.++||||+++|+|++++....+..
22232 T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~~~ydAV~~~a~al~~~~~~~~~~ 438 (596)
22233 T 6N50_A 361 LRPETNHRNPWFQEFWQHRFQCRLEGFPQENSKYNKTCNSSLTLKT--HHVQDSKMGFVINAIYSMAYGLHNMQMSLCPG 438 (596)
22234 T ss_pred cCCCCCCCCHHHHHHHHHHcCCCCCCCccccccCCCCCCCCccccc--CCCCccchHHHHHHHHHHHHHHHHHHhccCCC
22235 Confidence 322223345677788877766532210000 001112332211110 01123456789999999999999987543321
22236
22237
22238 Q NP_000836.2 427 YIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQL-HLKVEDMQW 504 (908)
22239 Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~-~~~~~~i~w 504 (908)
22240 ....|......++..+.++|++.+|.|.+|..+.||++|++...|.|++++..+ +...++.||.|+... .++ ..+.|
22241 T Consensus 439 ~~~~c~~~~~~~~~~l~~~l~~~~f~g~~G~~v~fd~~G~~~~~y~i~~~~~~~~~~~~~~~VG~~~~~~l~~~-~~i~W 517 (596)
22242 T 6N50_A 439 YAGLCDAMKPIDGRKLLESLMKTNFTGVSGDTILFDENGDSPGRYEIMNFKEMGKDYFDYINVGSWDNGELKMD-DDEVW 517 (596)
22243 T ss_pred CCCCCccCCCCCHHHHHHHHhcCceecCCCCeEEeCCCCCCCCCEEEEEEEEcCCCcEEEEEEEEEcCCceEEe-cceec
22244 Confidence 111222112235566778899899999888349999999998899999998532 223689999998652 122 13689
22245
22246
22247 Q NP_000836.2 505 AHREHTHPASVCSLPCKPGERKKTVKG-VPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIK 576 (908)
22248 Q Consensus 505 ~~~~~~~p~s~Cs~~c~~G~~k~~~~~-~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~ 576 (908)
22249 .++ ...|.++|+++|++|++|...++ +.|||+|.+|++++++++.++|.+||.++|||++++.|.+++...
22250 T Consensus 518 ~~~-~~~P~s~Cs~~C~~G~~~~~~~~~~~CC~~C~~C~~~~~s~~~~~C~~Cp~~~~~n~~~t~C~~~~~~~ 589 (596)
22251 T 6N50_A 518 SKK-SNIIRSVCSEPCEKGQIKVIRKGEVSCCWTCTPCKENEYVFDEYTCKACQLGSWPTDDLTGCDLIPVQH 589 (596)
22252 T ss_pred CCC-CCCCCceecCCCCCCceeCCCCCCCCCCcceecCCCCceeCCCCceecCCCCcCCCCCCCCEEEccCCc
22253 Confidence 753 36699999999999999988777 789999999999999987799999999999999999998776543
22254
22255
22256 No 12
22257 >6N4Y_C Metabotropic glutamate receptor 5, Nanobody; Cell Surface Receptor Nanobody, MEMBRANE; HET: FUC, MAN, NAG, BMA; 3.262A {Homo sapiens}
22258 Probab=100.00 E-value=4.4e-43 Score=405.35 Aligned_cols=536 Identities=41% Similarity=0.786 Sum_probs=309.2 Template_Neff=10.900
22259
22260 Q NP_000836.2 36 YAHSIRVDGDIILGGLFPVHAKGE----RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTY 111 (908)
22261 Q Consensus 36 ~~~~~~~~~~i~Ig~l~p~~~~~~----~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~ 111 (908)
22262 .......+++++||+++|.++... ....|+......+.....|+++|++++|+++++++|+++++++.|++++...
22263 T Consensus 42 ~~~~~~~~~~i~Ig~l~p~~~~~~~~~~~~~~cg~~~~~~g~~~~~a~~~Av~~iN~~~~~l~~~~l~~~i~D~~~~~~~ 121 (596)
22264 T 6N4Y_C 42 RRVVAHMPGDIIIGALFSVHHQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDPTLLPNITLGCEIRDSCWHSAV 121 (596)
22265 T ss_dssp -CCCEEECCSEEEEEEECCBCCCCTTTTTTTCCCSBCCCCCCHHHHHHHHHHHHHHHCSSSSTTCCEEEEEEECTTCHHH
22266 T ss_pred CeEEEEecCCEEEEeeeecccCCCccccccCCccccccccCHHHHHHHHHHHHHHhcCCCCCCCCeeeeEEeeCCCCHHH
22267 Confidence 334456789999999999985210 1234553222456778899999999999998888899999999999887655
22268
22269
22270 Q NP_000836.2 112 ALEQSLTFVQALIEKD---ASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTR 188 (908)
22271 Q Consensus 112 a~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~ 188 (908)
22272 +.+.+.+++....... .....|.+.++.+....++++++||+.++..+..++.++...++|+|++++.++.++++..
22273 T Consensus 122 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~aviG~~~s~~~~~~~~~~~~~~ip~is~~~~~~~l~~~~~ 201 (596)
22274 T 6N4Y_C 122 ALEQSIEFIRDSLISSEEEEGLVRCVDGSSSSFRSKKPIVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTL 201 (596)
22275 T ss_dssp HHHHHHHHHTGGGC-------------------CCCCCEEEEECCSSHHHHHHHHHHHTTTTCCEEESSCCCGGGGCTTT
22276 T ss_pred HHHHHHHHHHHhcCCcccccceeeccCCCcccccCCCCeEEEECCCCcHHHHHHHHHHHHhCCCEEeccCCCcccCCccc
22277 Confidence 5444444432100000 0000000000000001257889999988877778888899999999999887777766556
22278
22279
22280 Q NP_000836.2 189 YDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKR 268 (908)
22281 Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~ 268 (908)
22282 +++++++.|++..++.++++++++++|++|++|+.++.++....+.+++.+++. ++++.....+.......++...+++
22283 T Consensus 202 ~~~~~r~~p~~~~~~~al~~~l~~~~w~~v~ii~~~~~~g~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~ 280 (596)
22284 T 6N4Y_C 202 FKYFMRVVPSDAQQARAMVDIVKRYNWTYVSAVHTEGNYGESGMEAFKDMSAKE-GICIAHSYKIYSNAGEQSFDKLLKK 280 (596)
22285 T ss_dssp CTTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEECTTSHHHHHHHHHHH
22286 T ss_pred CCcccccCCCHHHHHHHHHHHHHHcCCCEEEEEEeCCcchHHHHHHHHHHHHHc-CceEEEEEEecccCChHHHHHHHHH
22287 Confidence 899999999999999999999988999999999988788888888888888775 4666543322211122345566666
22288
22289
22290 Q NP_000836.2 269 LLE-TPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRS 347 (908)
22291 Q Consensus 269 l~~-~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (908)
22292 +++ ..+.++|++......+..+++++.+.|+..++.|++.+.|...............+.+.+.......+.|..|+..
22293 T Consensus 281 i~~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~I~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~f~~fl~~ 360 (596)
22294 T 6N4Y_C 281 LTSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFLLLGSDGWADRYDVTDGYQREAVGGITIKLQSPDVKWFDDYYLK 360 (596)
22295 T ss_dssp HHHHTTTCCEEEEECCHHHHHHHHHHHHHTTCTTSCEEEECGGGSSCHHHHTTCHHHHTTCEEEEECCCCCHHHHHHHTT
22296 T ss_pred HHhcCCCeeEEEEECChHHHHHHHHHHHHhCCCCCEEEEEecccccccccccccccccccceeeeccCCCCccHHHHHHh
22297 Confidence 653 1244555655556667788998888887544667777655432211000111223334333333333445555433
22298
22299
22300 Q NP_000836.2 348 RTLANNRRNVWFAEFWEENFGCKLGSHGKR-NSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG 426 (908)
22301 Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~ 426 (908)
22302 ..+...+.+.++.++|++.++|........ ......|+....... ......++.++||||+++|+|++++....+..
22303 T Consensus 361 l~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~~~ydAV~~~a~al~~~~~~~~~~ 438 (596)
22304 T 6N4Y_C 361 LRPETNHRNPWFQEFWQHRFQCRLEGFPQENSKYNKTCNSSLTLKT--HHVQDSKMGFVINAIYSMAYGLHNMQMSLCPG 438 (596)
22305 T ss_dssp CCTTTCCSCTTHHHHHHHHTTEECTTCTTCCTTCSEECCTTCCTTT--TCCCCTTHHHHHHHHHHHHHHHHHHHHHHSTT
22306 T ss_pred cCcccCCCCHHHHHHHHHHcCCCCCCCCcccccccccCCCcceecc--cccccccHHHHHHHHHHHHHHHHHHHhhhCCC
22307 Confidence 322223345677788877666532110000 001112332211110 01123456679999999999999987543321
22308
22309
22310 Q NP_000836.2 427 YIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQL-HLKVEDMQW 504 (908)
22311 Q Consensus 427 ~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~-~~~~~~i~w 504 (908)
22312 ....|......++..+.++|++.+|.|.+|..+.||++|++...|.|.+++..+ +...++.||.|+... .++ ..+.|
22313 T Consensus 439 ~~~~c~~~~~~~~~~l~~~l~~~~f~g~~G~~v~fd~~G~~~~~y~i~~~~~~~~~~~~~~~VG~~~~~~l~~~-~~i~W 517 (596)
22314 T 6N4Y_C 439 YAGLCDAMKPIDGRKLLESLMKTNFTGVSGDTILFDENGDSPGRYEIMNFKEMGKDYFDYINVGSWDNGELKMD-DDEVW 517 (596)
22315 T ss_dssp CSSCCGGGSSCCHHHHHHHHHTCEEECTTSCEEECCTTSCCCCEEEEEEEEEEETTEEEEEEEEEEETTEEEEC-TTC--
22316 T ss_pred CCCCccccCCCCHHHHHHHHhcCeeecCCCCEEEeCCCCCCCcceEEEEEEEcCCCeeEEEEEEEEeCCceEEc-ccccc
22317 Confidence 112222112234566778899899999888349999999998899999998532 223689999998652 122 13689
22318
22319
22320 Q NP_000836.2 505 AHREHTHPASVCSLPCKPGERKKTVKG-VPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIK 576 (908)
22321 Q Consensus 505 ~~~~~~~p~s~Cs~~c~~G~~k~~~~~-~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~ 576 (908)
22322 .++ ...|.++|+.+|++|++|...++ +.|||+|.+|++++++++.++|.+||.++|||++++.|.+++...
22323 T Consensus 518 ~~~-~~~P~s~Cs~~C~~G~~k~~~~~~~~CC~~C~~C~~~~~s~~~~~C~~Cp~~~~~n~~~t~C~~~~~~~ 589 (596)
22324 T 6N4Y_C 518 SKK-SNIIRSVCSEPCEKGQIKVIRKGEVSCCWTCTPCKENEYVFDEYTCKACQLGSWPTDDLTGCDLIPVQH 589 (596)
22325 T ss_dssp -------CCCCSSCCC----CEEECCSSCTTCCEEEC------------------------------------
22326 T ss_pred ccC-CCCcceeecCCCCCCeEEeeeCCCCccccceeecCCCeEecCCceeccCCCCcccCccCCCeEEccCCc
22327 Confidence 763 36699999999999999988777 789999999999999987799999999999999999998776543
22328
22329
22330 No 13
22331 >5K5S_B Extracellular calcium-sensing receptor; Venus Flytrap module, cysteine-rich domain; HET: TRP, PO4, NAG; 2.6A {Homo sapiens}
22332 Probab=100.00 E-value=1.3e-42 Score=402.94 Aligned_cols=534 Identities=32% Similarity=0.555 Sum_probs=352.3 Template_Neff=10.900
22333
22334 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGER----------GVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSR 108 (908)
22335 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~----------~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~ 108 (908)
22336 .....++++||+++|.++.... ...|+... ..+.+...|+.+|++++|+++++++|+++++.+.|++++
22337 T Consensus 25 ~~~~~~~i~Ig~l~p~~~~~~~~~~~~~~~~~~~~c~~~~-~~~~~~~~a~~~Av~~iN~~~~~l~~~~l~~~~~D~~~~ 103 (615)
22338 T 5K5S_B 25 RAQKKGDIILGGLFPIHFGVAAKDQDLKSRPESVECIRYN-FRGFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNT 103 (615)
22339 T ss_dssp EEEECCSEEEEEEECSBSCBCCCCCCCSSCCCCCCBCSBC-HHHHHHHHHHHHHHHHHHHCSSSCSSCCEEEEEEECTTC
22340 T ss_pred ceEecCCEEEEeeeeceecccCCCCCcccCCCcccceeec-cccHHHHHHHHHHHHHHhcCCCCCCCCceeEEEEcCCCC
22341 Confidence 3567789999999999874321 12343211 245678899999999999998888999999999999887
22342
22343
22344 Q NP_000836.2 109 DTYALEQSLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTR 188 (908)
22345 Q Consensus 109 ~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~ 188 (908)
22346 ...+.+.+.+++... .....+....+.+....+++.++||+.++..+..++.++...++|+|++.+.++.++++..
22347 T Consensus 104 ~~~a~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~v~~viG~~~s~~~~~~~~~~~~~~iP~is~~~~~~~l~~~~~ 179 (615)
22348 T 5K5S_B 104 VSKALEATLSFVAQN----KIDSLNLDEFCNCSEHIPSTIAVVGATGSGVSTAVANLLGLFYIPQVSYASSSRLLSNKNQ 179 (615)
22349 T ss_dssp HHHHHHHHHHHTTTT----GGGC-------------CCEEEEECCSSHHHHHHHHHHHHHTTCCEEESSCCCGGGGCTTT
22350 T ss_pred HHHHHHHHHHHHhcC----CccCCCccccccCCCCCCCeEEEEcCCChHHHHHHHHHHcccCCCeEeccccCcccCCccc
22351 Confidence 655544444443211 0000000000011111135678999988877778889999999999999887777766557
22352
22353
22354 Q NP_000836.2 189 YDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKR 268 (908)
22355 Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~ 268 (908)
22356 +++++++.|++..++.++++++++++|++|++|+.++.++....+.+++.+++. ++++.....+....+..+....+++
22357 T Consensus 180 ~~~~~r~~p~~~~~~~al~~~l~~~~w~~v~iv~~~~~~g~~~~~~l~~~~~~~-gi~i~~~~~~~~~~~~~~~~~~~~~ 258 (615)
22358 T 5K5S_B 180 FKSFLRTIPNDEHQATAMADIIEYFRWNWVGTIAADDDYGRPGIEKFREEAEER-DICIDFSELISQYSDEEEIQHVVEV 258 (615)
22359 T ss_dssp CTTEEESSCCTHHHHHHHHHHHHHTTCCEEEEEEESSTTHHHHHHHHHHHHHHT-TCEEEEEEEECTTCCHHHHHHHHHH
22360 T ss_pred CCCccccCCChHHHHHHHHHHHHHcCCcEEEEEEEcCccchHHHHHHHHHHHHC-CcEEEEEEeecCCCCHHHHHHHHHH
22361 Confidence 899999999999999999999999999999999988788888888888888775 4676543333211122345556666
22362
22363
22364 Q NP_000836.2 269 LLETPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPV-YQQEEIAEGAVTILPKRASIDGFDRYFRS 347 (908)
22365 Q Consensus 269 l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (908)
22366 ++. .++++|++.+....+..+++++.+.|+.+ ..|+..+.|....... ........|.+.+.......++|..|+..
22367 T Consensus 259 l~~-~~~~vvi~~~~~~~~~~~l~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~f~~f~~~ 336 (615)
22368 T 5K5S_B 259 IQN-STAKVIVVFSSGPDLEPLIKEIVRRNITG-KIWLASEAWASSSLIAMPQYFHVVGGTIGFALKAGQIPGFREFLKK 336 (615)
22369 T ss_dssp HHT-CCCCEEEEECCHHHHHHHHHHHHHTTCCC-CEEEECTTTTTCTTTCCGGGHHHHTTCEEEEECCBCCTTHHHHHHT
22370 T ss_pred HHh-CCCeEEEEeCCchhHHHHHHHHHHcCCCC-CEEEEehhHhcchhccCccccceeceEEEEEeecccCccHHHHHHH
22371 Confidence 653 57899888877777888888888888753 5788776664432100 00112334555555444455566666544
22372
22373
22374 Q NP_000836.2 348 RTLANNRRNVWFAEFWEENFGCKLGSHGKR----------------------NSHIKKCTGLERIARD----SSYEQEGK 401 (908)
22375 Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~c~~~~~~~~~----~~~~~~~~ 401 (908)
22376 ..+.....+.++.++|++.+.|........ ..+...|++.+.+... .......+
22377 T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~ 416 (615)
22378 T 5K5S_B 337 VHPRKSVHNGFAKEFWEETFNCHLQEGAKGPLPVDTFLRGHEESGDRFSQSSTAFRPLCTGDENINSVETPYIDYTHLRI 416 (615)
22379 T ss_dssp CCTTTCSSBTTHHHHHHHHTTCBC-------------------------------CCBCCTTCCSTTSCCTTTCCSCBSH
22380 T ss_pred hCcccCCCChHHHHHHHHHhCCcCCCCCCCCCCchhhccCCcccCCcccCCCCCCCCCCCCCCCcccCCCCccccccccc
22381 Confidence 332223345567777777666542210000 0011123322211000 00112245
22382
22383
22384 Q NP_000836.2 402 VQFVIDAVYSMAYALHNMHKDLCPGY---IGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQI 478 (908)
22385 Q Consensus 402 ~~~~yDAv~~la~Al~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~ 478 (908)
22386 +.++||||+++|+||+++..+.+... ...|.......++.+.+.|++.+|.|.+|+.|.||++|++...|.|++++.
22387 T Consensus 417 ~~~~ydAV~~~A~aL~~~~~~~~~~~~~~~~~c~~~~~~~~~~l~~~l~~~~f~g~~gg~v~fd~~G~~~~~y~I~~~~~ 496 (615)
22388 T 5K5S_B 417 SYNVYLAVYSIAHALQDIYTCLPGRGLFTNGSCADIKKVEAWQVLKHLRHLQFTNNMGEQVTFDECGDLVGNYSIINWHL 496 (615)
22389 T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTSCCBTTTBCCCTTSCCHHHHHHHHHTCEEECTTSCEEECCTTSCCCCCEEEEEEEE
22390 T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccccChHHHHHHHhcCeeeCCCCCEEEECCCCCCCceEEEEEEEe
22391 Confidence 67899999999999999976543210 122221112234457788888899987644899999999988999999874
22392
22393
22394 Q NP_000836.2 479 TN--KSTEYKVIGHWTNQL------HLKVEDMQWAHREHTHPASVCSLPCKPGERKKTVKG-VPCCWHCERCEGYNYQV- 548 (908)
22395 Q Consensus 479 ~~--~~~~~~~Vg~~~~~~------~~~~~~i~w~~~~~~~p~s~Cs~~c~~G~~k~~~~~-~~Cc~~c~~C~~~~~~~- 548 (908)
22396 .+ +...++.||.|+... .++...+.|.++...+|.++|+.+|++|+++...++ +.|||+|.+|+++++++
22397 T Consensus 497 ~~~~~~~~~~~Vg~~~~~~~~~~~l~~~~~~i~W~~~~~~~P~s~Cs~~C~~G~~~~~~~~~~~CC~~C~~C~~~~~s~~ 576 (615)
22398 T 5K5S_B 497 SPEDGSIVFKEVGYYNVYAKKGERLFINEEKILWSGFSREVPFSNCSRDCLAGTRKGIIEGEPTCCFECVECPDGEYSDE 576 (615)
22399 T ss_dssp CTTTCSEEEEEEEEECSSSCTTSSEEECGGGCCBTTTBCSCCCCCSSCCCCTTEEEEECSSSCTTCEEEEECCTTEECCS
22400 T ss_pred CCCCCCEEEEEEEEEEeecCCCCeEEEehhheecCCCCCCCCeeeecCCCCcCceecccCCCCcccceeeeCCCCcEECC
22401 Confidence 31 123588999998532 123335789864456699999999999999877666 68999999999999997
22402
22403
22404 Q NP_000836.2 549 -DELSCELCPLDQRPNMNRTGCQLIPIIKLEWH 580 (908)
22405 Q Consensus 549 -~~~~C~~cp~~~~~~~~~~~c~~~~~~~~~~s 580 (908)
22406 +.++|.+||.++|||++++.|.+++..|+.|.
22407 T Consensus 577 ~~~~~C~~Cp~~~~~n~~~t~C~~~~~~~l~~~ 609 (615)
22408 T 5K5S_B 577 TDASACNKCPDDFWSNENHTSCIAKEIEFLSDY 609 (615)
22409 T ss_dssp TTCSSCEECCTTEEECTTSSSEEETC-------
22410 T ss_pred CCcccccCCCCCceecCCCCcEEecEEEeeccC
22411 Confidence 57999999999999999999999988888776
22412
22413
22414 No 14
22415 >5KZQ_A Metabotropic glutamate receptor 2; mGluR2, antagonist, antidepressent, SIGNALING PROTEIN; HET: NAG, 6YS; 2.8A {Homo sapiens}
22416 Probab=100.00 E-value=1.7e-42 Score=398.18 Aligned_cols=529 Identities=44% Similarity=0.837 Sum_probs=347.9 Template_Neff=11.000
22417
22418 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSL 117 (908)
22419 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
22420 .....+++++||+++|.+........|+......+.....|+++|++++|+++++++|+++++++.|++++...+.+.+.
22421 T Consensus 24 ~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~Ai~~iN~~~~~l~~~~l~~~~~D~~~~~~~a~~~~~ 103 (570)
22422 T 5KZQ_A 24 KVLTLEGDLVLGGLFPVHQKGGPAEDCGPVNEHRGIQRLEAMLFALDRINRDPHLLPGVRLGAHILDSCSKDTHALEQAL 103 (570)
22423 T ss_pred cceEecCCEEEEEeeehhccCCCccccccccCCccHHHHHHHHHHHHHHhcCCCCCCCCeeEEEEEeCCCCHHHHHHHHH
22424 Confidence 34677889999999999832211224443222345678899999999999988888999999999999877554444444
22425
22426
22427 Q NP_000836.2 118 TFVQALIEKD--ASDVKCANGDPPIFTK-PDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSR 194 (908)
22428 Q Consensus 118 ~~~~~l~~~~--~~~~~~~~~~~~~~~~-~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~ 194 (908)
22429 +++....... .....|...++.+... .++++++||+.++..+..++.++..+++|+|++.+.++.++++..++++++
22430 T Consensus 104 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~viG~~~s~~~~~~a~~~~~~~ip~is~~~~~~~ls~~~~~~~~~r 183 (570)
22431 T 5KZQ_A 104 DFVRASLSRGADGSRHICPDGSYATHGDAPTAITGVIGGSYSDVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFAR 183 (570)
22432 T ss_pred HHHhcccCCCCCCCceecCCCCcccCCCCCCCceEEECCCChHHHHHHHHHhhhhCCCeeecCCCChhhCCcccCCccee
22433 Confidence 4432100000 0000000000000000 136889999988877778888999999999999887777766556899999
22434
22435
22436 Q NP_000836.2 195 VVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPN 274 (908)
22437 Q Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (908)
22438 +.|++..+++++++++++++|++|++|++++.++....+.+++.+++. ++++.....++......++...+++++...+
22439 T Consensus 184 ~~p~~~~~~~al~~~l~~~~w~~v~il~~~~~~g~~~~~~~~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~ 262 (570)
22440 T 5KZQ_A 184 TVPPDFFQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFELEARAR-NICVATSEKVGRAMSRAAFEGVVRALLQKPS 262 (570)
22441 T ss_pred cCCChHHHHHHHHHHHHHhCCcEEEEEEecChhhHHHHHHHHHHHHHc-CcEEEEEEEcCCCCCCcccHHHHHHHHHhCC
22442 Confidence 999999999999999999999999999988788888888888887775 4666543333211122345555666642247
22443
22444
22445 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNR 354 (908)
22446 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (908)
22447 +++|++......+..+++++++.|+ ++.|++.+.|...............|.+.+.......++|..|+....+...+
22448 T Consensus 263 ~~viv~~~~~~~~~~~l~~~~~~g~--~~~~i~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~f~~~~~~~~~~~~~ 340 (570)
22449 T 5KZQ_A 263 ARVAVLFTRSEDARELLAASQRLNA--SFTWVASDGWGALESVVAGSEGAAEGAITIELASYPISDFASYFQSLDPWNNS 340 (570)
22450 T ss_pred cEEEEEECCHHHHHHHHHHHHHhCC--CeEEEEeCcccCChhHHhcchhHhceEEEEecCCCCCCcHHHHHHhcCCCCCC
22451 Confidence 8888887776677888888888776 46788776554322110001123344444433333333444443322222223
22452
22453
22454 Q NP_000836.2 355 RNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRM 434 (908)
22455 Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~ 434 (908)
22456 .+.++.++|++.+.|.... ..|+.. ..... ......++.++||||+++++|++++....+......|...
22457 T Consensus 341 ~~~~~~~~~~~~~~c~~~~--------~~c~~~-~~~~~-~~~~~~~~~~~ydAv~~~a~al~~~~~~~~~~~~~~c~~~ 410 (570)
22458 T 5KZQ_A 341 RNPWFREFWEQRFRCSFRQ--------RDCAAH-SLRAV-PFEQESKIMFVVNAVYAMAHALHNMHRALCPNTTRLCDAM 410 (570)
22459 T ss_pred CCHHHHHHHHHHcCCCCCC--------CCCCCC-CcccC-CCCCCcchHHHHHHHHHHHHHHHHHHhccCCCCCCCcccc
22460 Confidence 4556777777666553210 011110 00000 0112345678999999999999998764332211223221
22461
22462
22463 Q NP_000836.2 435 STIDGKEL-LGYIRAVNFNG------SAGTPVTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQLHLKVEDMQWAH 506 (908)
22464 Q Consensus 435 ~~~~~~~l-~~~l~~~~f~G------~~G~~v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~~~~~~~i~w~~ 506 (908)
22465 ...++.++ .+.+++..|.+ .+| .+.||++|++...|.|++++..+ +...++.||.|+....++...+.|++
22466 T Consensus 411 ~~~~~~~l~~~~l~~~~f~~~~~~~~~~g-~v~fd~~G~~~~~y~i~~~~~~~~~~~~~~~vg~~~~~~~~~~~~i~W~~ 489 (570)
22467 T 5KZQ_A 411 RPVNGRRLYKDFVLNVKFDAPFRPADTHN-EVRFDRFGDGIGRYNIFTYLRAGSGRYRYQKVGYWAEGLTLDTSLIPWAS 489 (570)
22468 T ss_pred CcCChhHHHHhhhhceeecCCCCCCCCCC-EEEeCCCCCCCccEEEEEEEEcCCCCeeEEEEEEECCCCccccccccCCC
22469 Confidence 11234443 35577777763 566 89999999998889998887432 12368899999865444434678976
22470
22471
22472 Q NP_000836.2 507 RE-HTHPASVCSLPCKPGERKKTVKGVPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWH 580 (908)
22473 Q Consensus 507 ~~-~~~p~s~Cs~~c~~G~~k~~~~~~~Cc~~c~~C~~~~~~~~~~~C~~cp~~~~~~~~~~~c~~~~~~~~~~s 580 (908)
22474 +. .+.|.++|++.|++|+++...+++.|||+|.+|++|+++++.++|.+||.++|||++++.|.+++..|+.+.
22475 T Consensus 490 ~~~~~~~~s~C~~~C~~g~~~~~~~~~~CC~~C~~C~~g~~~~~~~~C~~Cp~~~~~n~~~~~C~~~~~~~l~~~ 564 (570)
22476 T 5KZQ_A 490 PSAGPLPASRCSEPCLQNEVKSVQPGEVCCWLCIPCQPYEYRLDEFTCADCGLGYWPNASLTGCFELPQEYIREG 564 (570)
22477 T ss_pred CCCCCCCceeecCCCCCCceeCCCCCCccccccccCCCCeeecCccccccCCCccccCCCCCCeEecceehhccC
22478 Confidence 42 345889999999999998766567899999999999999988999999999999999999999888887664
22479
22480
22481 No 15
22482 >5K5T_A Extracellular calcium-sensing receptor; Venus Flytrap module, cysteine rich; HET: NAG, SO4; 3.1A {Homo sapiens}
22483 Probab=100.00 E-value=2.4e-42 Score=400.86 Aligned_cols=534 Identities=32% Similarity=0.559 Sum_probs=355.1 Template_Neff=11.000
22484
22485 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGER----------GVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSR 108 (908)
22486 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~----------~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~ 108 (908)
22487 ....+++++||+++|.++.... ...|+.. ...+.....|+++|++++|+++++++|+++++.+.|++++
22488 T Consensus 25 ~~~~~~~i~Ig~l~p~~~~~~~~~~~~~~~~~~~~c~~~-~~~~~~~~~a~~~Av~~iN~~~~llp~~~l~~~~~D~~~~ 103 (615)
22489 T 5K5T_A 25 RAQKKGDIILGGLFPIHFGVAAKDQDLKSRPESVECIRY-NFRGFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNT 103 (615)
22490 T ss_dssp CEEECCSEEEEEEECSBSCBCCCCCCCSSCCCCCCBCSB-CHHHHHHHHHHHHHHHHHHHCSSSSTTCCEEEEEEECTTC
22491 T ss_pred ceEecCCEEEEeeeeeeecccCCCCCcccCCCcccceee-ccccHHHHHHHHHHHHHHhcCCCCCCCCceeEEEEcCCCC
22492 Confidence 4567789999999999864321 1234321 1245678899999999999998888999999999999887
22493
22494
22495 Q NP_000836.2 109 DTYALEQSLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTR 188 (908)
22496 Q Consensus 109 ~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~ 188 (908)
22497 ...+.+.+.+++... .....+....+.+.....++.++||+.++..+..++.++..+++|+|++.+.++.++++..
22498 T Consensus 104 ~~~a~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~v~~viG~~~s~~~~~~a~~~~~~~ip~is~~~~~~~l~~~~~ 179 (615)
22499 T 5K5T_A 104 VSKALEATLSFVAQN----KIDSLNLDEFCNCSEHIPSTIAVVGATGSGVSTAVANLLGLFYIPQVSYASSSRLLSNKNQ 179 (615)
22500 T ss_dssp HHHHHHHHHHHHCCC----CCHHHSGGGGCC-----CCEEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTT
22501 T ss_pred HHHHHHHHHHHHhcC----CccCCCccccccCCCCCCCeEEEEcCCChHHHHHHHHHhcccCCCeEeccccCcccCCccc
22502 Confidence 655444444443210 0000000000011111135678999988877778888999999999999887777766556
22503
22504
22505 Q NP_000836.2 189 YDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKR 268 (908)
22506 Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~ 268 (908)
22507 +++++++.|++..++.++++++++++|++|++++.+++++....+.|++.+++. ++++.....+....+..++...+++
22508 T Consensus 180 ~~~~~~~~p~~~~~~~al~~~l~~~~w~~v~vl~~~~~~g~~~~~~~~~~~~~~-gi~v~~~~~~~~~~~~~~~~~~~~~ 258 (615)
22509 T 5K5T_A 180 FKSFLRTIPNDEHQATAMADIIEYFRWNWVGTIAADDDYGRPGIEKFREEAEER-DICIDFSELISQYSDEEEIQHVVEV 258 (615)
22510 T ss_dssp CTTEEESSCCTTHHHHHHHHHHHHTTCCEEEEEEESSTTHHHHHHHHHHHHHHT-TCEEEEEEEECTTCCHHHHHHHHHH
22511 T ss_pred CCcccccCCChHHHHHHHHHHHHHcCCcEEEEEEecCcccchHHHHHHHHHHHC-CcEEEEEEeecCCCCHHHHHHHHHH
22512 Confidence 899999999999999999999999999999999988888888888888888775 4776544333211122345556666
22513
22514
22515 Q NP_000836.2 269 LLETPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPV-YQQEEIAEGAVTILPKRASIDGFDRYFRS 347 (908)
22516 Q Consensus 269 l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (908)
22517 ++. .++++|++......+..+++++.+.++.+ ..|+..+.|....... ........|.+.+.......++|..|+..
22518 T Consensus 259 i~~-~~~~viv~~~~~~~~~~~l~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~f~~f~~~ 336 (615)
22519 T 5K5T_A 259 IQN-STAKVIVVFSSGPDLEPLIKEIVRRNITG-KIWLASEAWASSSLIAMPQYFHVVGGTIGFALKAGQIPGFREFLKK 336 (615)
22520 T ss_dssp HHH-CCCCEEEEECCHHHHHHHHHHHHHHTCCC-CEEEECHHHHTCTTTCCGGGHHHHTTCEEEEECCBCCTTHHHHHHT
22521 T ss_pred HHh-CCCeEEEEeCCchhHHHHHHHHHHcCCCC-CEEEEehhHhcchhccCccccceeceEEEEEeccccCccHHHHHHH
22522 Confidence 663 57899988877777888888888888753 5788777665432110 00112344555555444445566666544
22523
22524
22525 Q NP_000836.2 348 RTLANNRRNVWFAEFWEENFGCKLGSHGKR----------------------NSHIKKCTGLERIARD----SSYEQEGK 401 (908)
22526 Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~c~~~~~~~~~----~~~~~~~~ 401 (908)
22527 ..+.....+.++.++|+..+.|........ ..+...|++.+.+... .......+
22528 T Consensus 337 l~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~ 416 (615)
22529 T 5K5T_A 337 VHPRKSVHNGFAKEFWEETFNCHLQEGAKGPLPVDTFLRGHEESGDRFSQSSTAFRPLCTGDENINSVETPYIDYTHLRI 416 (615)
22530 T ss_dssp CCTTTCSSBTHHHHHHHHHHTSEECSSCCSCCCSCTTGGGGGSTTCCSSSGGGTCCCEECSCCCTTTSCCTTTCCSCBSH
22531 T ss_pred hCcccCCCChHHHHHHHHHhCCcCCCCCCCCCCchhhccCCcccCCcccCCCCCCCCCCCCCCCcccCCCCccccccccc
22532 Confidence 332223344566777777666542210000 0011123322211100 00112345
22533
22534
22535 Q NP_000836.2 402 VQFVIDAVYSMAYALHNMHKDLCPG---YIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQI 478 (908)
22536 Q Consensus 402 ~~~~yDAv~~la~Al~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~ 478 (908)
22537 +.++||||+++|+||+++..+.+.. ....|.......++.+.+.|++.+|.|.+|+.|.||++|++...|.|++++.
22538 T Consensus 417 ~~~~ydAV~~~A~aL~~~~~~~~~~~~~~~~~c~~~~~~~~~~l~~~l~~~~f~g~~G~~v~fd~~Gd~~~~y~I~~~~~ 496 (615)
22539 T 5K5T_A 417 SYNVYLAVYSIAHALQDIYTCLPGRGLFTNGSCADIKKVEAWQVLKHLRHLNFTNNMGEQVTFDECGDLVGNYSIINWHL 496 (615)
22540 T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTSBTBTTBBCCCSTTCCHHHHHHHHHSCEEECTTSCEEEBCSSSBBCCEEEEEEEEE
22541 T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccccCHHHHHHHHhhCeEECCCCCEEEeCCCCCCCceEEEEEEEe
22542 Confidence 6789999999999999987654321 0122222112334557788888899988776799999999988999999874
22543
22544
22545 Q NP_000836.2 479 TN--KSTEYKVIGHWTNQL------HLKVEDMQWAHREHTHPASVCSLPCKPGERKKTVKG-VPCCWHCERCEGYNYQV- 548 (908)
22546 Q Consensus 479 ~~--~~~~~~~Vg~~~~~~------~~~~~~i~w~~~~~~~p~s~Cs~~c~~G~~k~~~~~-~~Cc~~c~~C~~~~~~~- 548 (908)
22547 .. +...++.||.|+... .++...+.|.++...+|.++|+.+|++|+++...++ +.|||+|.+|+++++++
22548 T Consensus 497 ~~~~~~~~~~~Vg~~~~~~~~~~~l~~~~~~i~W~~~~~~~P~s~Cs~~C~~G~~~~~~~~~~~Cc~~C~~C~~~~~s~~ 576 (615)
22549 T 5K5T_A 497 SPEDGSIVFKEVGYYNVYAKKGERLFINEEKILWSGFSREVPFSNCSRDCLAGTRKGIIEGEPTCCFECVECPDGEYSDE 576 (615)
22550 T ss_dssp CTTTCSEEEEEEEEEESSSCTTSSEEECGGGCCBTTTBCSCCCCCSSCCCCTTEEEEECSSSCTTCEEEEECCTTEECCS
22551 T ss_pred CCCCCCEEEEEEEEEEeecCCCCeEEEeccceecCCCCCCCCeeeecCCCCcCceecccCCCCcccceeeeCCCCcEECC
22552 Confidence 31 123588999998542 123335789764446699999999999999877666 68999999999999997
22553
22554
22555 Q NP_000836.2 549 -DELSCELCPLDQRPNMNRTGCQLIPIIKLEWH 580 (908)
22556 Q Consensus 549 -~~~~C~~cp~~~~~~~~~~~c~~~~~~~~~~s 580 (908)
22557 +.++|.+||.++|||++++.|.+++..|+.|+
22558 T Consensus 577 ~~~~~C~~Cp~~~~~n~~~t~C~~~~~~~l~~~ 609 (615)
22559 T 5K5T_A 577 TDASACNKCPDDFWSNENHTSCIAKEIEFLSDY 609 (615)
22560 T ss_dssp SSCSSCEECCTTEEECTTSSSEEECCC------
22561 T ss_pred CCcccccCCCCCceecCCCCcEEecEEEeecCC
22562 Confidence 57999999999999999999999988888776
22563
22564
22565 No 16
22566 >6FFH_A Metabotropic glutamate receptor 5,Endolysin,Metabotropic glutamate; 7TM, RECEPTOR, GPCR, MEMBRANE-PROTEIN, SIGNALING; HET: D7W, OLC, YCM, MES, OLA; 2.65A {Homo sapiens}
22567 Probab=100.00 E-value=9.6e-38 Score=308.98 Aligned_cols=266 Identities=48% Similarity=0.851 Sum_probs=223.2 Template_Neff=4.100
22568
22569 Q NP_000836.2 573 PIIKLEWHSPWAVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFLMIAAPDTIICSFRR 652 (908)
22570 Q Consensus 573 ~~~~~~~s~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~~~~~~l~G~~l~~~~~~~~~~~~~~~~C~~~~ 652 (908)
22571 +.++..+++++.+++.+++++|++++++++++++++|+++++|.+++.+++++|+|+.++|+++++++..|+...|.+|.
22572 T Consensus 4 PveyLs~S~~~~i~llaLSaIGILitLiiLIIfI~~RsTPvIk~ssp~L~~~iLLG~~l~~~~~~~~~~~p~~~~C~lR~ 83 (444)
22573 T 6FFH_A 4 PVQYLRWGDPAPIAAVVFACLGLLATLFVTVVFIIYRDTPVVKSSSRELCYIILAGICLGYLCTFXLIAKPKQIYCYLQR 83 (444)
22574 T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHSCHHHHHHHHHHHHHHHHTHHHHBSCSCHHHHHHHH
22575 T ss_pred cceeccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhcCCHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHH
22576 Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
22577
22578
22579 Q NP_000836.2 653 VFLGLGMCFSYAALLTKTNRIHRIFEQGKKSV---------TAP------------------------------------ 687 (908)
22580 Q Consensus 653 ~~~~~gf~l~~~~l~~K~~ri~~if~~~~~~~---------~~~------------------------------------ 687 (908)
22581 |++++||+++||++++|+||++++|..++++. .++
22582 T Consensus 84 ~~l~lgfsl~~~~l~vKt~RI~~if~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~v~~~~l~~~~~~~~~~~~~~d~~~~ 163 (444)
22583 T 6FFH_A 84 IGIGLSPAMSYSALVTKTYRAARILAMSKKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIG 163 (444)
22584 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESSSCHHHHHHHHHHHHS
22585 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccccceeeecCcchhhhhhhhHHhcCCcccchhhhhhhhhcc
22586 Confidence 99999999999999999999999998664320 000
22587
22588
22589 Q NP_000836.2 688 -------------------------------------------------------------------------------- 687 (908)
22590 Q Consensus 688 -------------------------------------------------------------------------------- 687 (908)
22591
22592 T Consensus 164 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (444)
22593 T 6FFH_A 164 RNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAV 243 (444)
22594 T ss_dssp SCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTTCHHHHHHHHTTCHHHHHH
22595 T ss_pred cCCCCccchhHHHHHhcCchhHHHHHhHhccCCCccccchhHHHHHHHHHhhhccCcccccccchhHHHHHHhchhHHHH
22596 Confidence
22597
22598
22599 Q NP_000836.2 688 -------------------------------------KFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRT 730 (908)
22600 Q Consensus 688 -------------------------------------~~~~~~~l~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~~~~ 730 (908)
22601 ++.+.+.++.++++++.+|+++++.|...+|+........
22602 T Consensus 244 ~~~~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iq~~i~~~~~~~~pp~~~~~~~~--- 320 (444)
22603 T 6FFH_A 244 NLAKSRWYNQTPNRAKRVITTFRTGTWDAYKICTKKPRFMSACAQLVIAFILICIQLGIIVALFIMEPPDIMHDYPS--- 320 (444)
22604 T ss_dssp HHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHSCCCBSSSCC----
22605 T ss_pred hhhhcccccCCCCccceeeeeeecCCccchhhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCCcc---
22606 Confidence 0112233455566677899999999999998876543211
22607
22608
22609 Q NP_000836.2 731 LDPEKARGVLKCDISDLSLICSLGYSILLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSAEK 810 (908)
22610 Q Consensus 731 ~~~~~~~~~~~C~~~~~~~~~~~~~~~~ll~~~~~la~~~R~~~~~~nes~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (908)
22611 .......|...+.++++.++|+++|+++|+++|+++|++|++|||+|+|++++|+.+++|+++.|+++.....
22612 T Consensus 321 ----~~~~~~~C~~~~~~~~~~l~y~~iLll~~~~~A~~tR~vp~~fnEak~I~~~~y~~~ii~~~~~p~~~~~~~~--- 393 (444)
22613 T 6FFH_A 321 ----IREVYLICNTTNLGVVAPLGYNGLLILACTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYK--- 393 (444)
22614 T ss_dssp ------CCBCCBCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCH---
22615 T ss_pred ----cceEEEeecCCChHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCcH---
22616 Confidence 2345679998777778899999999999999999999999999999999999999999999999998876533
22617
22618
22619 Q NP_000836.2 811 MYIQTTTLTVSMSLSASVSLGMLYMPKVYIIIFHPEQNVQKR 852 (908)
22620 Q Consensus 811 ~~~~~~~~~~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~ 852 (908)
22621 +.+.++++++++++.++++|+||+|.++++||++.+..
22622 T Consensus 394 ----~~~~~~~i~l~~t~~l~~iF~PK~~~I~~~p~~n~~~~ 431 (444)
22623 T 6FFH_A 394 ----IITMCFSVSLSATVALGCMFVPKVYIILAKPERNVRSA 431 (444)
22624 T ss_dssp ----HHHHHHHHHHHHHHHHHHHTHHHHHHHHHCTTTC----
22625 T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccchHHH
22626 Confidence 23677899999999999999999999999999887653
22627
22628
22629 No 17
22630 >6FFI_A Metabotropic glutamate receptor 5,Endolysin,Metabotropic glutamate; 7TM, RECEPTOR, GPCR, MEMBRANE-PROTEIN, SIGNALING; HET: YCM, MES, OLA, D8B; 2.2A {Homo sapiens}
22631 Probab=100.00 E-value=9.6e-38 Score=308.98 Aligned_cols=266 Identities=48% Similarity=0.851 Sum_probs=222.1 Template_Neff=4.100
22632
22633 Q NP_000836.2 573 PIIKLEWHSPWAVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFLMIAAPDTIICSFRR 652 (908)
22634 Q Consensus 573 ~~~~~~~s~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~~~~~~l~G~~l~~~~~~~~~~~~~~~~C~~~~ 652 (908)
22635 +.++..+++++.+++.+++++|++++++++++++++|+++++|.+++.+++++|+|+.++|+++++++..|+...|.+|.
22636 T Consensus 4 PveyLs~S~~~~i~llaLSaIGILitLiiLIIfI~~RsTPvIk~ssp~L~~~iLLG~~l~~~~~~~~~~~p~~~~C~lR~ 83 (444)
22637 T 6FFI_A 4 PVQYLRWGDPAPIAAVVFACLGLLATLFVTVVFIIYRDTPVVKSSSRELCYIILAGICLGYLCTFXLIAKPKQIYCYLQR 83 (444)
22638 T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGSHHHHSSCHHHHHHHHHHHHHHHHTHHHHBCCSCHHHHHHHH
22639 T ss_pred cceeccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhcCCHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHH
22640 Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
22641
22642
22643 Q NP_000836.2 653 VFLGLGMCFSYAALLTKTNRIHRIFEQGKKSV---------TAP------------------------------------ 687 (908)
22644 Q Consensus 653 ~~~~~gf~l~~~~l~~K~~ri~~if~~~~~~~---------~~~------------------------------------ 687 (908)
22645 |++++||+++||++++|+||++++|..++++. .++
22646 T Consensus 84 ~~l~lgfsl~~~~l~vKt~RI~~if~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~v~~~~l~~~~~~~~~~~~~~d~~~~ 163 (444)
22647 T 6FFI_A 84 IGIGLSPAMSYSALVTKTYRAARILAMSKKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIG 163 (444)
22648 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECTTCCEEEETTEECCCSSCHHHHHHHHHHHHS
22649 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccccceeeecCcchhhhhhhhHHhcCCcccchhhhhhhhhcc
22650 Confidence 99999999999999999999999998664320 000
22651
22652
22653 Q NP_000836.2 688 -------------------------------------------------------------------------------- 687 (908)
22654 Q Consensus 688 -------------------------------------------------------------------------------- 687 (908)
22655
22656 T Consensus 164 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (444)
22657 T 6FFI_A 164 RNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAV 243 (444)
22658 T ss_dssp SCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTCHHHHHH
22659 T ss_pred cCCCCccchhHHHHHhcCchhHHHHHhHhccCCCccccchhHHHHHHHHHhhhccCcccccccchhHHHHHHhchhHHHH
22660 Confidence
22661
22662
22663 Q NP_000836.2 688 -------------------------------------KFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRT 730 (908)
22664 Q Consensus 688 -------------------------------------~~~~~~~l~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~~~~ 730 (908)
22665 ++.+.+.++.++++++.+|+++++.|...+|+........
22666 T Consensus 244 ~~~~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iq~~i~~~~~~~~pp~~~~~~~~--- 320 (444)
22667 T 6FFI_A 244 NLAKSRWYNQTPNRAKRVITTFRTGTWDAYKICTKKPRFMSACAQLVIAFILICIQLGIIVALFIMEPPDIMHDYPS--- 320 (444)
22668 T ss_dssp HHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHSCCCBC--------
22669 T ss_pred hhhhcccccCCCCccceeeeeeecCCccchhhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCCcc---
22670 Confidence 0112233455566677899999999999998876543211
22671
22672
22673 Q NP_000836.2 731 LDPEKARGVLKCDISDLSLICSLGYSILLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSAEK 810 (908)
22674 Q Consensus 731 ~~~~~~~~~~~C~~~~~~~~~~~~~~~~ll~~~~~la~~~R~~~~~~nes~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (908)
22675 .......|...+.++++.++|+++|+++|+++|+++|++|++|||+|+|++++|+.+++|+++.|+++.....
22676 T Consensus 321 ----~~~~~~~C~~~~~~~~~~l~y~~iLll~~~~~A~~tR~vp~~fnEak~I~~~~y~~~ii~~~~~p~~~~~~~~--- 393 (444)
22677 T 6FFI_A 321 ----IREVYLICNTTNLGVVAPLGYNGLLILACTFYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYK--- 393 (444)
22678 T ss_dssp ------CCBCCBCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCH---
22679 T ss_pred ----cceEEEeecCCChHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCcH---
22680 Confidence 2345679998777778899999999999999999999999999999999999999999999999998876533
22681
22682
22683 Q NP_000836.2 811 MYIQTTTLTVSMSLSASVSLGMLYMPKVYIIIFHPEQNVQKR 852 (908)
22684 Q Consensus 811 ~~~~~~~~~~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~ 852 (908)
22685 +.+.++++++++++.++++|+||+|.++++||++.+..
22686 T Consensus 394 ----~~~~~~~i~l~~t~~l~~iF~PK~~~I~~~p~~n~~~~ 431 (444)
22687 T 6FFI_A 394 ----IITMCFSVSLSATVALGCMFVPKVYIILAKPERNVRSA 431 (444)
22688 T ss_dssp ----HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCTTTC----
22689 T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccchHHH
22690 Confidence 23677899999999999999999999999999887653
22691
22692
22693 No 18
22694 >4OR2_B Chimera of Soluble cytochrome b562; Human metabotropic glutamate receptor 1; HET: PO4, OLC, OLA, CLR, FM9; 2.8A {Escherichia coli, Homo sapiens}
22695 Probab=100.00 E-value=1.8e-37 Score=330.24 Aligned_cols=271 Identities=46% Similarity=0.820 Sum_probs=228.1 Template_Neff=8.400
22696
22697 Q NP_000836.2 570 QLIPIIKLEWHSPWAVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFLMIAAPDTIICS 649 (908)
22698 Q Consensus 570 ~~~~~~~~~~s~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~i~~s~~~~~~~~l~G~~l~~~~~~~~~~~~~~~~C~ 649 (908)
22699 .+.+..+.+++++..+++.+++++|++++++++++++++|+++.+|+++|.++.++++|++++|++++++..+|++..|.
22700 T Consensus 108 ~~~p~~~l~~~~~~~i~~~~l~~lgil~~l~~~~~~~~~R~~~vIk~ss~~l~~liL~G~~l~~~s~~~~~~~ps~~~C~ 187 (389)
22701 T 4OR2_B 108 YLIPVRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIAKPTTTSCY 187 (389)
22702 T ss_dssp GTSCCBCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTSCHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHH
22703 T ss_pred ccCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCchhcHh
22704 Confidence 33355677888999999999999999999988999999999999999999999999999999999999999899999999
22705
22706
22707 Q NP_000836.2 650 FRRVFLGLGMCFSYAALLTKTNRIHRIFEQGKKSV--TAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGE 727 (908)
22708 Q Consensus 650 ~~~~~~~~gf~l~~~~l~~K~~ri~~if~~~~~~~--~~~~~~~~~~l~~~~~~~~~i~~~i~~~w~~~~p~~~~~~~~~ 727 (908)
22709 +|.|++++||+++||++++|+||++++|++++++. +.++..+++.++..++++++++++++++|+..+|+.+......
22710 T Consensus 188 ~r~~~~~lgf~l~~g~l~~Kt~Ri~~iF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~iil~~w~~~~p~~~~~~~~~ 267 (389)
22711 T 4OR2_B 188 LQRLLVGLSSAMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPS 267 (389)
22712 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCCCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHSCCCEEEECCS
22713 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeecCCC
22714 Confidence 99999999999999999999999999998765421 1234566777777788888999999999999999887543211
22715
22716
22717 Q NP_000836.2 728 QRTLDPEKARGVLKCDISDLSLICSLGYSILLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQS 807 (908)
22718 Q Consensus 728 ~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~ll~~~~~la~~~R~~~~~~nes~~i~~~~~~~~~~~~~~~~~~~~~~~~ 807 (908)
22719 .......|++.+.++.+.++|+++|++++++|||++|++|++|||+|+|++++|+++++|+++.|+++..+.
22720 T Consensus 268 -------~~~~~~~C~~~~~~~~~~~~y~~lLl~~~~~LA~~tR~~~~~~nEsk~i~~~iy~~~~~~~i~~p~~~~~~~- 339 (389)
22721 T 4OR2_B 268 -------IKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNY- 339 (389)
22722 T ss_dssp -------SSCCEEEECCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC-
22723 T ss_pred -------CceEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhCCCH-
22724 Confidence 123456899876667788999999999999999999999999999999999999999999999999875432
22725
22726
22727 Q NP_000836.2 808 AEKMYIQTTTLTVSMSLSASVSLGMLYMPKVYIIIFHPEQNVQKRKR 854 (908)
22728 Q Consensus 808 ~~~~~~~~~~~~~~i~~~~~~~l~~~f~PK~~~i~~~~~~~~~~~~~ 854 (908)
22729 .+.+.+++++++++++++++|+||++.++++|+++.+++.+
22730 T Consensus 340 ------~~~~~~~~il~~~~~~l~~lF~PK~~~i~~~~~~~~~~~~~ 380 (389)
22731 T 4OR2_B 340 ------KIITTCFAVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFT 380 (389)
22732 T ss_dssp ------HHHHHHHHHHHHHHHHCCCCCHHHHHHHHTCHHHHC-----
22733 T ss_pred ------HHHHHHHHHHHHHHHHHHHHHccceeEEeeCcccchhhhhh
22734 Confidence 23467788899999999999999999999999998876544
22735
22736
22737 No 19
22738 >6BT5_B Metabotropic glutamate receptor 8; mGluR8, GRM8, L-AP4, GENE ID:; HET: NAG, E7P; 2.92A {Homo sapiens}
22739 Probab=99.87 E-value=2.3e-27 Score=265.12 Aligned_cols=468 Identities=100% Similarity=1.505 Sum_probs=271.7 Template_Neff=11.300
22740
22741 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
22742 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
22743 ...+++++||+++|+++.......|+......+.....|+++|++++|+++++++|.++++.+.|++.++..+.+.+...
22744 T Consensus 4 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~~~~~a~~~iN~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~ 83 (479)
22745 T 6BT5_B 4 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 83 (479)
22746 T ss_dssp EEECCSEEEEEEECCEEECSSSCSEEEECCCCCCCHHHHHHHHHHHHHHCSSTTTTCCEEEEEEECTTCHHHHHHHHGGG
22747 T ss_pred eeeCCCEEEEEEEeccccCCCCCCCCcccccccHHHHHHHHHHHHHHhcCCCcCCCCeEeeEEecCCCCHHHHHHHHHHH
22748 Confidence 35567899999999987543223454432235677889999999999998887778899999999877643323333444
22749
22750
22751 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
22752 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
22753 +++++.+...+..|...........++++++||+.++..+..++.++...++|+|++.+..+.+.+...+++++++.++.
22754 T Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~avig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~~~~~~~~~~~ 163 (479)
22755 T 6BT5_B 84 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 163 (479)
22756 T ss_dssp CC------------------------CEEEEECCSSHHHHHHHHHHHTTTTCCEEESSCCCGGGGCTTTCTTEEESSCCH
22757 T ss_pred HHHHHhccccccccCCCCCCccCCCCceEEEEcCCCchHHHHHHHHHHHhCCCEEecCCCCcccCCcccccceeecCCCh
22758 Confidence 44433210000000000000000013788999998887777888999999999999887666554433578899999999
22759
22760
22761 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
22762 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
22763 ...+.++++++.+++|+++++++.++.++....+.+++.+++.+++++.....+.......++...++++++..++++|+
22764 T Consensus 164 ~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iv 243 (479)
22765 T 6BT5_B 164 SYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVSIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 243 (479)
22766 T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEESSHHHHHHHHHHHHHHHHCSSCEEEEEEEECSSCCTTHHHHHHHHHTTSTTCCEEE
22767 T ss_pred HHHHHHHHHHHHHhCCCEEEEEEEcCcchHHHHHHHHHHHHHhCCeEEEEEEecCCCCCcchHHHHHHHHHhCCCCcEEE
22768 Confidence 88999999999888999999999777778777888887776642244443222221112234556666665224788888
22769
22770
22771 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
22772 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
22773 +......+..+++++++.|+..++.|++.+.|...............+.+.+.+.......+..++........+...++
22774 T Consensus 244 ~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 323 (479)
22775 T 6BT5_B 244 MFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 323 (479)
22776 T ss_dssp EECCHHHHHHHHHHHHHTTCTTTCEEEECTTTTTCSTTTTTCTTTTTTCEEEEESCCCCHHHHHHHHTCCTTTCCSCTTH
22777 T ss_pred EeCCHHHHHHHHHHHHHhCCCCCeEEEEeccccCCCcchhcccchhceeEEEeccccCCCcHHHHHHcCCcccCCCCHHH
22778 Confidence 87777778889999998887534567766544322110000111223333222211111122222111100111223445
22779
22780
22781 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDG 439 (908)
22782 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~ 439 (908)
22783 .++|++.+++..............|+..+............++..+|||+++++.|++++....+......|......++
22784 T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDav~~l~~al~~~~~~~~~~~~~~c~~~~~~~~ 403 (479)
22785 T 6BT5_B 324 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDG 403 (479)
22786 T ss_dssp HHHHHHHHTCCC-----------CCCSCCCBTTTBCCCCCTTHHHHHHHHHHHHHHHHHHHHHHSSSCSSCCGGGSSCCH
22787 T ss_pred HHHHHHHhCCcccCCCccccccccccccchhcCCccccccccHHHHHHHHHHHHHHHHHHHHhhCCCCCCCChhhccCCH
22788 Confidence 56666555432110000000011222211100000011234677899999999999998865432211122322122345
22789
22790
22791 Q NP_000836.2 440 KELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAHR 507 (908)
22792 Q Consensus 440 ~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~~~ 507 (908)
22793 ..+.+.|++..|.|.+|.+++||++|++...+.+++++..+....++.||.|+....+....+.|+++
22794 T Consensus 404 ~~l~~~l~~~~f~G~tG~~~~f~~~g~~~~~~~i~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~w~~~ 471 (479)
22795 T 6BT5_B 404 KELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAHR 471 (479)
22796 T ss_dssp HHHHHHHHTCEEECTTSSEEECCSSSCCCCEEEEEEEEEETTEEEEEEEEEEESSEEECGGGCCC---
22797 T ss_pred HHHHHHHHhCceecCCCCeeEeCCCCCCCCcEEEEEEEEeCCceeEEEEEEEecceeecHHheeeccc
22798 Confidence 56778888889999877469999999988888888887432123578899999765554456788754
22799
22800
22801 No 20
22802 >6BSZ_A Metabotropic glutamate receptor 8; mGluR8, GRM8, glutamate, GENE ID:; HET: GGL, NAG, SO4; 2.65A {Homo sapiens}
22803 Probab=99.86 E-value=3.3e-27 Score=263.84 Aligned_cols=468 Identities=100% Similarity=1.503 Sum_probs=273.7 Template_Neff=11.300
22804
22805 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
22806 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
22807 ...+++++||+++|.++.......|+......+.....|+++|++++|++++++++.++++.+.|++.+...+.+.+.+.
22808 T Consensus 4 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~~~~~a~~~iN~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~ 83 (479)
22809 T 6BSZ_A 4 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 83 (479)
22810 T ss_dssp EEECCSEEEEEEECCEEECSTTCSEEEECCCCCCCHHHHHHHHHHHHHHCSSTTTTCCEEEEEEECTTCHHHHHHHHGGG
22811 T ss_pred eeeCCCEEEEEeeeceecCCCCCCCCcccccccHHHHHHHHHHHHHHhcCCCcCCCceEeeEEecCCCCHHHHHHHHHHH
22812 Confidence 34567999999999987543223455433335677889999999999998877778899999999877653323333334
22813
22814
22815 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
22816 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
22817 +++++.+......|...........++++++||+.++.....++.++...++|+|++.+..+.+.+...+++++++.++.
22818 T Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~viG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~~~~~~~~~~~ 163 (479)
22819 T 6BSZ_A 84 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 163 (479)
22820 T ss_dssp CCC-----------------------CEEEEECCSSHHHHHHHHHHHTTTTCCEEESSCCCGGGGCTTTCTTEEESSCCH
22821 T ss_pred HHHHHhccccccccCCCCCCccCCCCceEEEEcCCCchHHHHHHHHHHHhCCCeEecCCCCccccCcccccceeecCCCh
22822 Confidence 44333210000000000000000013788999998887777888899999999999887666554434578899999999
22823
22824
22825 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
22826 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
22827 ...+.++++++++++|+++++++.++.++....+.+.+.+++.+++++.....+....+..++...++++++..++++|+
22828 T Consensus 164 ~~~~~a~~~~~~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iv 243 (479)
22829 T 6BSZ_A 164 SYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVSIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 243 (479)
22830 T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEESSHHHHHHHHHHHHHHHHSSSCEEEEEEEECSSCCTTHHHHHHHHHTTSTTCCEEE
22831 T ss_pred HHHHHHHHHHHHHhCCCEEEEEEecCcccHHHHHHHHHHHHHhCCeEEEEEEecCCCCCcchHHHHHHHHHhCCCCcEEE
22832 Confidence 98999999999889999999999877778878888887776542244443222211112234556666665224788888
22833
22834
22835 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
22836 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
22837 +......+..+++++.+.++.+++.|+..+.|...............+.+.+.+.......+..++........+...++
22838 T Consensus 244 ~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (479)
22839 T 6BSZ_A 244 MFANEDDIRRILEAAKKLQQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 323 (479)
22840 T ss_dssp EECCHHHHHHHHHHHHHTTCTTTCEEEECTTTTTCSTTTTTCTTTTTTCEEEEESCCCCHHHHHHHHTCCTTTCCSCTTH
22841 T ss_pred EeCCHHHHHHHHHHHHHhccCCCeEEEEeccccCCccchhcccchheeeEEEeccccCCCcHHHHHHcCCcccCCCCHHH
22842 Confidence 87776778888999888876534667766544322110000111223333322221111122211111000011223345
22843
22844
22845 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDG 439 (908)
22846 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~ 439 (908)
22847 .++|++.+++..............|...+............++..+|||+++++.|+++.....+......|......++
22848 T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDav~~~~~al~~~~~~~~~~~~~~c~~~~~~~~ 403 (479)
22849 T 6BSZ_A 324 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDG 403 (479)
22850 T ss_dssp HHHHHHHHTCCC-----------CCCSCCCTTTTSCCCCCTTHHHHHHHHHHHHHHHHHHHHHHSSSCSSCCGGGSSCCH
22851 T ss_pred HHHHHHHhCCcccCCCCcccccccccCcccccCCccccccccHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCchhccCCH
22852 Confidence 56666554432110000000011122111000000011234677899999999999998865432211122322122345
22853
22854
22855 Q NP_000836.2 440 KELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAHR 507 (908)
22856 Q Consensus 440 ~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~~~ 507 (908)
22857 ..+.+.|++.+|.|.+|+.+.||++|++...+.+++++..+....+..||.|+....++...+.|+++
22858 T Consensus 404 ~~l~~~l~~~~f~G~tG~~v~fd~~g~~~~~~~i~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~w~~~ 471 (479)
22859 T 6BSZ_A 404 KELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAHR 471 (479)
22860 T ss_dssp HHHHHHHHHCCEECTTSCEECCCTTSCCCCEEEEEEEEECSSCEEEEEEEEEESSEEECGGGCCCCCC
22861 T ss_pred HHHHHHHHhCceecCCCCceEeCCCCCCCCcEEEEEEEEeCCceeeEEEEEEecceeeeHhhceeccc
22862 Confidence 56778888889999877469999999988788888887422123578899999765555556888764
22863
22864
22865 No 21
22866 >3KS9_B Metabotropic glutamate receptor 1; Glutamate Receptors, mGluR1, Dimerization, Glutamic; HET: Z99, NAG; 1.9A {Homo sapiens}
22867 Probab=99.85 E-value=1.4e-26 Score=259.76 Aligned_cols=465 Identities=41% Similarity=0.750 Sum_probs=274.0 Template_Neff=11.100
22868
22869 Q NP_000836.2 37 AHSIRVDGDIILGGLFPVHAKGE----RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYA 112 (908)
22870 Q Consensus 37 ~~~~~~~~~i~Ig~l~p~~~~~~----~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a 112 (908)
22871 ......+++++||+++|.++... ....|+......+.....|+++|++++|+++++++|+++++.+.|+++++..+
22872 T Consensus 9 ~~~~~~~~~~~Ig~l~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~a~~~in~~~~~~~~~~i~~~~~d~~~~~~~~ 88 (496)
22873 T 3KS9_B 9 RSVARMDGDVIIGALFSVHHQPPAEKVPERKCGEIREQYGIQRVEAMFHTLDKINADPVLLPNITLGSEIRDSCWHSSVA 88 (496)
22874 T ss_dssp CCCEEECCSEEEEEEECSBCCCCGGGGGGTCCCCBCCCCCCHHHHHHHHHHHHHHHCSSSSTTCCEEEEEEECTTCHHHH
22875 T ss_pred cceEEecCCEEEEEEEEeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHHhcCCCCCCCceEeeEEEeCCCCHHHH
22876 Confidence 34456778999999999987531 12356543334567788999999999999877777899999999988876544
22877
22878
22879 Q NP_000836.2 113 LEQSLTFVQALIE----KDASDVKCANGDP--PIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDN 186 (908)
22880 Q Consensus 113 ~~~~~~~~~~l~~----~~~~~~~~~~~~~--~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~ 186 (908)
22881 .+.+.+++..... +......|...+. .....+++++++||+.++.....++.++...++|+|++.+..+.+.+.
22882 T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~v~avig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~ 168 (496)
22883 T 3KS9_B 89 LEQSIEFIRDSLISIRDEKDGINRCLPDGQSLPPGRTKKPIAGVIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDK 168 (496)
22884 T ss_dssp HHHHHHHHHTTC--------------------------CCEEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCT
22885 T ss_pred HHHHHHHHHHccccccCCCCcccccCCCCCCCCCCCCCCCeEEEEcCCCcHHHHHHHHHHHHhCCCEEEeccCchhcCCc
22886 Confidence 4443333321000 0000000000000 000001578899998887777778888999999999988766655443
22887
22888
22889 Q NP_000836.2 187 TRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKII 266 (908)
22890 Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~ 266 (908)
22891 ..+++++++.++....+.++++++++++|+++++++.++.++....+.+++.+++. ++++.....+.......++...+
22892 T Consensus 169 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~l 247 (496)
22893 T 3KS9_B 169 TLYKYFLRVVPSDTLQARAMLDIVKRYNWTYVSAVHTEGNYGESGMDAFKELAAQE-GLSIAHSDKIYSNAGEKSFDRLL 247 (496)
22894 T ss_dssp TTCTTEEESSCCTHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHTTT-TCEEEEEEEECTTCCHHHHHHHH
22895 T ss_pred cccCcceecCCCHHHHHHHHHHHHHHcCCCEEEEEEeCCcchhHHHHHHHHHHHHc-CCeEEEEEEecccCChhHHHHHH
22896 Confidence 34688999999999999999999988899999999987777877778888877765 35554322121111234556667
22897
22898
22899 Q NP_000836.2 267 KRLLETP--NARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRY 344 (908)
22900 Q Consensus 267 ~~l~~~~--~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (908)
22901 ++++. . +.++|++......+..+++++++.|+..++.|++.+.|...............+.+.+.........+..+
22902 T Consensus 248 ~~l~~-~~~~~~~iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 326 (496)
22903 T 3KS9_B 248 RKLRE-RLPKARVVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGWADRDEVIEGYEVEANGGITIKLQSPEVRSFDDY 326 (496)
22904 T ss_dssp HHHHH-TTTTCCEEEEECCHHHHHHHHHHHHHHTCCSCCEEEECTTTTTCHHHHTTCHHHHTTCEEEEECCCCCHHHHHH
22905 T ss_pred HHHHH-hCCCCeEEEEEcCHHHHHHHHHHHHHcCCCCceEEEeeccccCCchhhccccchhcceEEEEecCCCCcCHHHH
22906 Confidence 77653 3 55788777666677788888888887544567766544332110000111122333322222222223222
22907
22908
22909 Q NP_000836.2 345 FRSRTLANNRRNVWFAEFWEENFGCKLGSHGK-RNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDL 423 (908)
22910 Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~ 423 (908)
22911 +........+...++.++|++.+.+....... ...+...|.+++.... ......+++++|||++++++|++++....
22912 T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~~~ydav~~~a~al~~~~~~~ 404 (496)
22913 T 3KS9_B 327 FLKLRLDTNTRNPWFPEFWQHRFQCRLPGHLLENPNFKRICTGNESLEE--NYVQDSKMGFVINAIYAMAHGLQNMHHAL 404 (496)
22914 T ss_dssp HTTCCTTTCCSCTTHHHHHHHHTTCBCC-------CCSSBCCSCCCTTT--TCCCCTTHHHHHHHHHHHHHHHHHHHHHH
22915 T ss_pred HHhCCCCCCCCCCcHHHHHHHHcCccCCcccCCCCCcCccCCCCccccc--cccccchHHHHHHHHHHHHHHHHHHHHHh
22916 Confidence 21111111122345666666655542110000 0001112322111100 01234567789999999999999887543
22917
22918
22919 Q NP_000836.2 424 CPGYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTP-VTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQL-HLKVE 500 (908)
22920 Q Consensus 424 ~~~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~-v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~-~~~~~ 500 (908)
22921 +......|......++..+.+.|++..|.|.+| . ++||++|++...+.|++++..+ +...++.||.|+... .++..
22922 T Consensus 405 ~~~~~~~c~~~~~~~~~~l~~~l~~~~f~g~tG-~~v~fd~~G~~~~~~~i~~~~~~~~~~~~~~~vg~~~~~~l~~~~~ 483 (496)
22923 T 3KS9_B 405 CPGHVGLCDAMKPIDGSKLLDFLIKSSFIGVSG-EEVWFDEKGDAPGRYDIMNLQYTEANRYDYVHVGTWHEGVLNIDDY 483 (496)
22924 T ss_dssp STTCSSCCGGGSSCCHHHHHHHHHTCEEECTTS-CEEECCTTSCCCCEEEEEEEEECSSSCEEEEEEEEEETTEEEECC-
22925 T ss_pred CCCCCCCchhcCCCCHHHHHHHHhcCceecCCC-CEEEeCCCCCCCCeEEEEEEEeCCCCceEEEEEEEEECCEEEEccc
22926 Confidence 322112232222245667888898889999988 7 9999999998888888887432 123689999999762 33334
22927
22928
22929 Q NP_000836.2 501 DMQWAH 506 (908)
22930 Q Consensus 501 ~i~w~~ 506 (908)
22931 .+.|++
22932 T Consensus 484 ~i~w~~ 489 (496)
22933 T 3KS9_B 484 KIQMNK 489 (496)
22934 T ss_dssp ------
22935 T ss_pred eeeecC
22936 Confidence 677865
22937
22938
22939 No 22
22940 >4XAR_A Metabotropic glutamate receptor 3; mGluR2 mGluR3 ECD, SIGNALING PROTEIN; HET: 40F; 2.26A {Homo sapiens}
22941 Probab=99.85 E-value=1.6e-26 Score=260.59 Aligned_cols=462 Identities=47% Similarity=0.846 Sum_probs=277.1 Template_Neff=10.800
22942
22943 Q NP_000836.2 37 AHSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQS 116 (908)
22944 Q Consensus 37 ~~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~ 116 (908)
22945 ......+++++||+++|.++.......|+......+.....|+++|++++|+++++++|+++++.+.|+++++..+.+.+
22946 T Consensus 32 ~~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~~~~~A~~~iN~~~~~~~g~~l~l~~~d~~~~~~~a~~~~ 111 (517)
22947 T 4XAR_A 32 RREIKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGVHILDTCSRDTYALEQS 111 (517)
22948 T ss_dssp CCCEEECCSEEEEEEECCEEECSTTCSEEEECCCCCCHHHHHHHHHHHHHTTCSSSSTTCCEEEEEEECTTCHHHHHHHH
22949 T ss_pred hcceeecCCEEEEEEeeceecCCCCCCCccccccccHHHHHHHHHHHHHHhcCCCCCCCCeEeEEEEeCCCCHHHHHHHH
22950 Confidence 34456688999999999987543233454332235677889999999999998888888999999999887755444333
22951
22952
22953 Q NP_000836.2 117 LTFVQALIEK-DASDVKCANGDPPIF-TKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSR 194 (908)
22954 Q Consensus 117 ~~~~~~l~~~-~~~~~~~~~~~~~~~-~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~ 194 (908)
22955 .+++.+.... +.....|........ ....++++++|+.++.....++.++...++|+|++.+..+.+.+...++++++
22956 T Consensus 112 ~~l~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~~~~~~ 191 (517)
22957 T 4XAR_A 112 LEFVRASLTKVDEAEYMCPDGSYAIQENIPLLIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFAR 191 (517)
22958 T ss_dssp GGGTGGGC----------------------CCCSEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTCTTEEE
22959 T ss_pred HHHHHhcccccchhhhcCCCCChhhhcCCCcceEEEEcCCCcHHHHHHHHHHHHhCCCeeecccCCcccCCccccCceee
22960 Confidence 3333210000 000000000000000 00025788999888877778888899999999998876665554445789999
22961
22962
22963 Q NP_000836.2 195 VVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPN 274 (908)
22964 Q Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (908)
22965 +.|+....+.++++++.+++|++++++++++.++....+.+++.+++. ++++.....++......++...+++++...+
22966 T Consensus 192 ~~p~~~~~~~al~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~l~~i~~~~~ 270 (517)
22967 T 4XAR_A 192 TVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLR-NISIATAEKVGRSNIRKSYDSVIRELLQKPN 270 (517)
22968 T ss_dssp SSCCHHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEECSSTTCCCHHHHHHHHHTCTT
22969 T ss_pred eCCCcHHHHHHHHHHHHHcCCcEEEEEEecCcchHHHHHHHHHHHHHC-CCEEEEEEecCcccccccHHHHHHHHHcCCC
22970 Confidence 999999999999999988999999999987778888888888887765 3555433222211122345556666631247
22971
22972
22973 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNR 354 (908)
22974 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (908)
22975 +|+|++......+..+++++++.|+ ++.|++.+.|...............+.+.+.........+..++....+....
22976 T Consensus 271 ~~~vvl~~~~~~~~~~l~~~~~~g~--~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (517)
22977 T 4XAR_A 271 ARVVVLFMRSDDSRELIAAASRANA--SFTWVASDGWGAQESIIKGSEHVAYGAITLELASQPVRQFDRYFQSLNPYNNH 348 (517)
22978 T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTC--CCEEEECTTTTTCHHHHTTCTTTSTTCEEEEECCCCCHHHHHHHHTCCTTTCC
22979 T ss_pred ceEEEEECChHHHHHHHHHHHHcCC--CEEEEEecchhccchhhcCCcceecceEEEEEcccCCccHHHHHHhCCCCCCC
22980 Confidence 8888887777778889998888876 35677665544321110001122333333322222222333332221111122
22981
22982
22983 Q NP_000836.2 355 RNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRM 434 (908)
22984 Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~ 434 (908)
22985 ...++.++|++.+.+..... ......|...+.... .......++.++|||++++++|++++....+......|...
22986 T Consensus 349 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~ydav~~~a~al~~~~~~~~~~~~~~c~~~ 424 (517)
22987 T 4XAR_A 349 RNPWFRDFWEQKFQCSLQNK---RNHRRVCDKHLAIDS-SNYEQESKIMFVVNAVYAMAHALHKMQRTLCPNTTKLCDAM 424 (517)
22988 T ss_dssp SCTTHHHHHHHHTTSBC----------CBCCTTCCCCT-TTCCCCTTHHHHHHHHHHHHHHHHHHHHHHCTTCSSCCGGG
22989 T ss_pred CChHHHHHHHHHcCCccCCc---ccCCcccccccccCC-CccccccchhHHHHHHHHHHHHHHHHHHhhCCCCCCcchhh
22990 Confidence 33456666666554421100 000011211110000 00123456788999999999999998764432211223211
22991
22992
22993 Q NP_000836.2 435 ST-IDGKELLGYIRAVNFNG-------SAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAH 506 (908)
22994 Q Consensus 435 ~~-~~~~~l~~~l~~~~f~G-------~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~~ 506 (908)
22995 .. ..+..+.+.+++..|.| .+| ++.||.+|++...+.|++++..++...++.||.|+....++...+.|++
22996 T Consensus 425 ~~~~~~~~l~~~l~~~~f~g~~~~~~~~tG-~v~fd~~G~r~~~~~i~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~w~~ 503 (517)
22997 T 4XAR_A 425 KILDGKKLYKDYLLKINFTAPFNPNKDADS-IVKFDTFGDGMGRYNVFNFQNVGGKYSYLKVGHWAETLSLDVNSIHWSR 503 (517)
22998 T ss_dssp SSCCHHHCCCCCCSCEEECCC-----CCCC-EEECCTTSCCCCEEEEEEEEESSSCEEEEEEEEEESSEEECGGGCCCSC
22999 T ss_pred cccchHHHHHHHHhcCcccCCCCCCCCCCc-eeEeCCCCCCCCcEEEEEEEEeCCEEEEEEEEEEeeeEEeccccEEecC
23000 Confidence 11 12234667788888998 778 8999999999888999998743212368899999976444444677864
23001
23002
23003 No 23
23004 >6B7H_A Metabotropic glutamate receptor 3; mGluR3 Glutamate, MEMBRANE PROTEIN-AGONIST complex; HET: NAG, CWY; 2.82A {Homo sapiens}
23005 Probab=99.85 E-value=1.6e-26 Score=260.59 Aligned_cols=462 Identities=47% Similarity=0.846 Sum_probs=275.1 Template_Neff=10.800
23006
23007 Q NP_000836.2 37 AHSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQS 116 (908)
23008 Q Consensus 37 ~~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~ 116 (908)
23009 ......+++++||+++|.++.......|+......+.....|+++|++++|+++++++|+++++.+.|+++++..+.+.+
23010 T Consensus 32 ~~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~~~~~A~~~iN~~~~~~~g~~l~l~~~d~~~~~~~a~~~~ 111 (517)
23011 T 6B7H_A 32 RREIKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGVHILDTCSRDTYALEQS 111 (517)
23012 T ss_dssp CCCEEC-CCEEEEEEECCEEC----CCCCEECCCCCCCHHHHHHHHHHHHTTCSSSSTTCCEEEEEEECTTCHHHHHHHH
23013 T ss_pred hcceeecCCEEEEEEeeceecCCCCCCCccccccccHHHHHHHHHHHHHHhcCCCCCCCCeEeEEEEeCCCCHHHHHHHH
23014 Confidence 34456688999999999987543233454332235677889999999999998888888999999999887755444333
23015
23016
23017 Q NP_000836.2 117 LTFVQALIEK-DASDVKCANGDPPIF-TKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSR 194 (908)
23018 Q Consensus 117 ~~~~~~l~~~-~~~~~~~~~~~~~~~-~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~ 194 (908)
23019 .+++.+.... +.....|........ ....++++++|+.++.....++.++...++|+|++.+..+.+.+...++++++
23020 T Consensus 112 ~~l~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~~~~~~ 191 (517)
23021 T 6B7H_A 112 LEFVRASLTKVDEAEYMCPDGSYAIQENIPLLIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFAR 191 (517)
23022 T ss_dssp GGGTSTTC---------------------CCCEEEEECCSSHHHHHHHHHHHHTTTCCEEESSCCCGGGGCTTTCTTEEE
23023 T ss_pred HHHHHhcccccchhhhcCCCCChhhhcCCCcceEEEEcCCCcHHHHHHHHHHHHhCCCeeecccCCcccCCccccCceee
23024 Confidence 3333210000 000000000000000 00025788999888877778888899999999998876665554445789999
23025
23026
23027 Q NP_000836.2 195 VVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPN 274 (908)
23028 Q Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (908)
23029 +.|+....+.++++++.+++|++++++++++.++....+.+++.+++. ++++.....++......++...+++++...+
23030 T Consensus 192 ~~p~~~~~~~al~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~l~~i~~~~~ 270 (517)
23031 T 6B7H_A 192 TVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLR-NISIATAEKVGRSNIRKSYDSVIRELLQKPN 270 (517)
23032 T ss_dssp SSCCHHHHHHHHHHHHHHTTCCEEEEEEESSTTHHHHHHHHHHHHHHT-TCEEEEEEEESSSTTSCCHHHHHHHHHTCTT
23033 T ss_pred eCCCcHHHHHHHHHHHHHcCCcEEEEEEecCcchHHHHHHHHHHHHHC-CCEEEEEEecCcccccccHHHHHHHHHcCCC
23034 Confidence 999999999999999988999999999987778888888888887765 3555433222211122345556666631247
23035
23036
23037 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNR 354 (908)
23038 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (908)
23039 +|+|++......+..+++++++.|+ ++.|++.+.|...............+.+.+.........+..++....+....
23040 T Consensus 271 ~~~vvl~~~~~~~~~~l~~~~~~g~--~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (517)
23041 T 6B7H_A 271 ARVVVLFMRSDDSRELIAAASRANA--SFTWVASDGWGAQESIIKGSEHVAYGAITLELASQPVRQFDRYFQSLNPYNNH 348 (517)
23042 T ss_dssp CCEEEEECCHHHHHHHHHHHHTTTC--CCEEEECTTTTTCHHHHTTCHHHHTTCEEEEECCCCCHHHHHHHHHCCTTTCC
23043 T ss_pred ceEEEEECChHHHHHHHHHHHHcCC--CEEEEEecchhccchhhcCCcceecceEEEEEcccCCccHHHHHHhCCCCCCC
23044 Confidence 8888887777778889998888876 35677665544321110001122333333322222222333332221111122
23045
23046
23047 Q NP_000836.2 355 RNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRM 434 (908)
23048 Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~ 434 (908)
23049 ...++.++|++.+.+..... ......|...+.... .......++.++|||++++++|++++....+......|...
23050 T Consensus 349 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~ydav~~~a~al~~~~~~~~~~~~~~c~~~ 424 (517)
23051 T 6B7H_A 349 RNPWFRDFWEQKFQCSLQNK---RNHRRVCDKHLAIDS-SNYEQESKIMFVVNAVYAMAHALHKMQRTLCPNTTKLCDAM 424 (517)
23052 T ss_dssp SCTTHHHHHHHHTTCBC----------CBCCTTCCCCT-TTCCCCTTHHHHHHHHHHHHHHHHHHHHHHCTTCSSCCGGG
23053 T ss_pred CChHHHHHHHHHcCCccCCc---ccCCcccccccccCC-CccccccchhHHHHHHHHHHHHHHHHHHhhCCCCCCcchhh
23054 Confidence 33456666666554421100 000011211110000 00123456788999999999999998764432211223211
23055
23056
23057 Q NP_000836.2 435 ST-IDGKELLGYIRAVNFNG-------SAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAH 506 (908)
23058 Q Consensus 435 ~~-~~~~~l~~~l~~~~f~G-------~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~~ 506 (908)
23059 .. ..+..+.+.+++..|.| .+| ++.||.+|++...+.|++++..++...++.||.|+....++...+.|++
23060 T Consensus 425 ~~~~~~~~l~~~l~~~~f~g~~~~~~~~tG-~v~fd~~G~r~~~~~i~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~w~~ 503 (517)
23061 T 6B7H_A 425 KILDGKKLYKDYLLKINFTAPFNPNKDADS-IVKFDTFGDGMGRYNVFNFQNVGGKYSYLKVGHWAETLSLDVNSIHWSR 503 (517)
23062 T ss_dssp SSCCHHHCCCCCCSCEEECCC-----CCTT-EEECCTTSCCCCCEEEEEEEESSSSEEEEEEEEESSSEEECGGGCCCSC
23063 T ss_pred cccchHHHHHHHHhcCcccCCCCCCCCCCc-eeEeCCCCCCCCcEEEEEEEEeCCEEEEEEEEEEeeeEEeccccEEecC
23064 Confidence 11 12234667788888998 778 8999999999888999998743212368899999976444444677864
23065
23066
23067 No 24
23068 >1EWK_B METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1; SIGNAL TRANSDUCTION, NEUROTRANSMITTER, CNS, NEURON; HET: EPE, NAG, GLU; 2.2A {Rattus norvegicus} SCOP: c.93.1.1
23069 Probab=99.85 E-value=1.8e-26 Score=258.44 Aligned_cols=464 Identities=42% Similarity=0.763 Sum_probs=275.1 Template_Neff=11.000
23070
23071 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGE----RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYAL 113 (908)
23072 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~----~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~ 113 (908)
23073 .....+++++||+++|+++... ....|+......+.+...|+++|++++|+++++++++++++.+.|+++++..+.
23074 T Consensus 5 ~~~~~~~~~~ig~l~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~a~~~in~~~~~~~~~~i~~~~~d~~~~~~~~~ 84 (490)
23075 T 1EWK_B 5 SVARMDGDVIIGALFSVHHQPPAEKVPERKCGEIREQYGIQRVEAMFHTLDKINADPVLLPNITLGSEIRDSCWHSSVAL 84 (490)
23076 T ss_dssp CCEEECCSEEEEEEECSBCCCCGGGTTTTCCCSBCCCCCCHHHHHHHHHHHHHHTCSSSSTTCCEEEEEEECTTSHHHHH
23077 T ss_pred ceeEecCCEEEEEEEEeccCCCCCCCCCCCcccccccccHHHHHHHHHHHHHHhcCCCCCCCceEeeEEEecCCCHHHHH
23078 Confidence 3456778999999999987532 134676544445677889999999999998877788999999999988765444
23079
23080
23081 Q NP_000836.2 114 EQSLTFVQALIE----KDASDVKCANGDP--PIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNT 187 (908)
23082 Q Consensus 114 ~~~~~~~~~l~~----~~~~~~~~~~~~~--~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~ 187 (908)
23083 +.+.+++..... +......|...+. ......+++++++|+.++.....++.++...++|+|++.+..+.+.+..
23084 T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~v~avig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~ 164 (490)
23085 T 1EWK_B 85 EQSIEFIRDSLISIRDEKDGLNRCLPDGQTLPPGRTKKPIAGVIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDKT 164 (490)
23086 T ss_dssp HHHHHHHC-----------------------------CCEEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTT
23087 T ss_pred HHHHHHHHHccccccCCcccccccCCCCCCCCCCCCCCCeEEEEcCCCchHHHHHHHHhhhhCCCEEEeccCchhhcCcc
23088 Confidence 443333321000 0000000000000 0000015788999988877777778888999999999877665554433
23089
23090
23091 Q NP_000836.2 188 RYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIK 267 (908)
23092 Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~ 267 (908)
23093 .+++++++.++....+.++++++++++|++|++++.++.++....+.+++.+++. ++++.....+.......++...++
23094 T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~vl~~~~~~~~~~~~~~~~~~~~~-g~~i~~~~~~~~~~~~~~~~~~~~ 243 (490)
23095 T 1EWK_B 165 LYKYFLRVVPSDTLQARAMLDIVKRYNWTYVSAVHTEGNYGESGMDAFKELAAQE-GLCIAHSDKIYSNAGEKSFDRLLR 243 (490)
23096 T ss_dssp TCTTEEESSCCTHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEECTTCCHHHHHHHHH
23097 T ss_pred cccceeecCCChHHHHHHHHHHHHHcCCCEEEEEEeCCccchhhHHHHHHHHHHc-CceEEEeeEeccccchHHHHHHHH
23098 Confidence 4689999999988889999999988899999999987778887888888877765 355543321211112335566677
23099
23100
23101 Q NP_000836.2 268 RLLETP--NARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYF 345 (908)
23102 Q Consensus 268 ~l~~~~--~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (908)
23103 +++. . +.++|++......+..+++++++.|+.+++.|++.+.|...............+.+.+.........+..++
23104 T Consensus 244 ~l~~-~~~~~~~iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 322 (490)
23105 T 1EWK_B 244 KLRE-RLPKARVVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGWADRDEVIEGYEVEANGGITIKLQSPEVRSFDDYF 322 (490)
23106 T ss_dssp HHHH-TTTTCCEEEEECCHHHHHHHHHHHHHHTCCSCCEEEECTTTTTCHHHHTTCHHHHTTCEEEEECCCCCHHHHHHH
23107 T ss_pred HHHH-hCCCCeEEEEEcChHHHHHHHHHHHHcCCCCeeEEEecccccCchhhhhccccccceeEEEEecCCCCCCHHHHH
23108 Confidence 7753 3 457787776666778899999888875445677665443321100001111223222221111112222222
23109
23110
23111 Q NP_000836.2 346 RSRTLANNRRNVWFAEFWEENFGCKLGSHGK-RNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLC 424 (908)
23112 Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~ 424 (908)
23113 ........+...++.++|++.+.+....... .......|++++.... ......+++.+|||++++++|++++....+
23114 T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~~~yDav~~~a~al~~~~~~~~ 400 (490)
23115 T 1EWK_B 323 LKLRLDTNTRNPWFPEFWQHRFQCRLPGHLLENPNFKKVCTGNESLEE--NYVQDSKMGFVINAIYAMAHGLQNMHHALC 400 (490)
23116 T ss_dssp TTCCTTTCCSCTTHHHHHHHHTTCBCTTCTTCCTTCCSBCCSCCCTTT--TCCCCTTHHHHHHHHHHHHHHHHHHHHHHS
23117 T ss_pred HhCCCCCCCCCCcHHHHHHHHcCccCCcccCCCCccCccCCCCccccc--ccccccchHHHHHHHHHHHHHHHHHHHHhC
23118 Confidence 1111111123345666666665542210000 0000112322111100 011345677899999999999998865433
23119
23120
23121 Q NP_000836.2 425 PGYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTP-VTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQL-HLKVED 501 (908)
23122 Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~-v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~-~~~~~~ 501 (908)
23123 ......|......++..+.+.|++..|.|.+| . +.||++|++...+.|.+++..+ +...++.||.|+... .++...
23124 T Consensus 401 ~~~~~~c~~~~~~~~~~l~~~l~~~~f~G~tG-~~v~fd~~g~~~~~~~i~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~ 479 (490)
23125 T 1EWK_B 401 PGHVGLCDAMKPIDGRKLLDFLIKSSFVGVSG-EEVWFDEKGDAPGRYDIMNLQYTEANRYDYVHVGTWHEGVLNIDDYK 479 (490)
23126 T ss_dssp TTCSSCCGGGSSCCHHHHHHHHHTCCEECTTS-CEECCCTTSCCCCEEEEEEEEECSSSCEEEEEEEEEETTEEEECTTT
23127 T ss_pred CCCCCCchhcCCCCHHHHHHHHhcCceecCCC-CeEEECCCCCCCCeEEEEEEEEccCCeeEEEEEEEEECCEEEEccce
23128 Confidence 21112232222235667888898889999998 7 9999999988888888887432 223689999999762 233346
23129
23130
23131 Q NP_000836.2 502 MQWAH 506 (908)
23132 Q Consensus 502 i~w~~ 506 (908)
23133 +.|++
23134 T Consensus 480 ~~w~~ 484 (490)
23135 T 1EWK_B 480 IQMNK 484 (490)
23136 T ss_dssp C----
23137 T ss_pred eeecC
23138 Confidence 78865
23139
23140
23141 No 25
23142 >1EWT_A METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1; SIGNAL TRANSDUCTION, NEUROTRANSMITTER, CNS, NEURON; HET: SO4, NAG; 3.7A {Rattus norvegicus} SCOP: c.93.1.1
23143 Probab=99.85 E-value=1.8e-26 Score=258.44 Aligned_cols=464 Identities=42% Similarity=0.763 Sum_probs=275.4 Template_Neff=11.000
23144
23145 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGE----RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYAL 113 (908)
23146 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~----~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~ 113 (908)
23147 .....+++++||+++|+++... ....|+......+.+...|+++|++++|+++++++++++++.+.|+++++..+.
23148 T Consensus 5 ~~~~~~~~~~ig~l~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~a~~~in~~~~~~~~~~i~~~~~d~~~~~~~~~ 84 (490)
23149 T 1EWT_A 5 SVARMDGDVIIGALFSVHHQPPAEKVPERKCGEIREQYGIQRVEAMFHTLDKINADPVLLPNITLGSEIRDSCWHSSVAL 84 (490)
23150 T ss_dssp CEEEECCSEEEEEEECCBCCCCGGGTTTTCCCSBCCCCCCCHHHHHHHHHHHHHHCSSSSTTCCEEEEEEECTTCHHHHH
23151 T ss_pred ceeEecCCEEEEEEEEeccCCCCCCCCCCCcccccccccHHHHHHHHHHHHHHhcCCCCCCCceEeeEEEecCCCHHHHH
23152 Confidence 3456778999999999987532 134676544445677889999999999998877788999999999988765444
23153
23154
23155 Q NP_000836.2 114 EQSLTFVQALIE----KDASDVKCANGDP--PIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNT 187 (908)
23156 Q Consensus 114 ~~~~~~~~~l~~----~~~~~~~~~~~~~--~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~ 187 (908)
23157 +.+.+++..... +......|...+. ......+++++++|+.++.....++.++...++|+|++.+..+.+.+..
23158 T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~v~avig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~ 164 (490)
23159 T 1EWT_A 85 EQSIEFIRDSLISIRDEKDGLNRCLPDGQTLPPGRTKKPIAGVIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDKT 164 (490)
23160 T ss_dssp HHHHHHHHHHHHTTC----------------------CCEEEEECCSCHHHHHHHHHHHTTTTCCEEESSCCCGGGGCTT
23161 T ss_pred HHHHHHHHHccccccCCcccccccCCCCCCCCCCCCCCCeEEEEcCCCchHHHHHHHHhhhhCCCEEEeccCchhhcCcc
23162 Confidence 443333321000 0000000000000 0000015788999988877777778888999999999877665554433
23163
23164
23165 Q NP_000836.2 188 RYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIK 267 (908)
23166 Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~ 267 (908)
23167 .+++++++.++....+.++++++++++|++|++++.++.++....+.+++.+++. ++++.....+.......++...++
23168 T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~vl~~~~~~~~~~~~~~~~~~~~~-g~~i~~~~~~~~~~~~~~~~~~~~ 243 (490)
23169 T 1EWT_A 165 LYKYFLRVVPSDTLQARAMLDIVKRYNWTYVSAVHTEGNYGESGMDAFKELAAQE-GLCIAHSDKIYSNAGEKSFDRLLR 243 (490)
23170 T ss_dssp TCTTEEESSBCSHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHH-CCEEEEEEEECTTCCHHHHHHHHH
23171 T ss_pred cccceeecCCChHHHHHHHHHHHHHcCCCEEEEEEeCCccchhhHHHHHHHHHHc-CceEEEeeEeccccchHHHHHHHH
23172 Confidence 4689999999988889999999988899999999987778887888888877765 355543321211112335566677
23173
23174
23175 Q NP_000836.2 268 RLLETP--NARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYF 345 (908)
23176 Q Consensus 268 ~l~~~~--~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (908)
23177 +++. . +.++|++......+..+++++++.|+.+++.|++.+.|...............+.+.+.........+..++
23178 T Consensus 244 ~l~~-~~~~~~~iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 322 (490)
23179 T 1EWT_A 244 KLRE-RLPKARVVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGWADRDEVIEGYEVEANGGITIKLQSPEVRSFDDYF 322 (490)
23180 T ss_dssp HHHH-TTTTTTEEEEECCHHHHHHHHHHHHHTTCCSSCEEEECTTTTTCTTTSSSTTTTTTTCEEEEECCCCCHHHHHHH
23181 T ss_pred HHHH-hCCCCeEEEEEcChHHHHHHHHHHHHcCCCCeeEEEecccccCchhhhhccccccceeEEEEecCCCCCCHHHHH
23182 Confidence 7753 3 457787776666778899999888875445677665443321100001111223222221111112222222
23183
23184
23185 Q NP_000836.2 346 RSRTLANNRRNVWFAEFWEENFGCKLGSHGK-RNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLC 424 (908)
23186 Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~ 424 (908)
23187 ........+...++.++|++.+.+....... .......|++++.... ......+++.+|||++++++|++++....+
23188 T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~~~yDav~~~a~al~~~~~~~~ 400 (490)
23189 T 1EWT_A 323 LKLRLDTNTRNPWFPEFWQHRFQCRLPGHLLENPNFKKVCTGNESLEE--NYVQDSKMGFVINAIYAMAHGLQNMHHALC 400 (490)
23190 T ss_dssp HSCCTTTCCSCTTHHHHHHHHHTCBCSSCSSCCTTCSSBCCSCCCTTT--TCCCCSTHHHHHHHHHHHHHHHHHHHHHHS
23191 T ss_pred HhCCCCCCCCCCcHHHHHHHHcCccCCcccCCCCccCccCCCCccccc--ccccccchHHHHHHHHHHHHHHHHHHHHhC
23192 Confidence 1111111123345666666665542210000 0000112322111100 011345677899999999999998865433
23193
23194
23195 Q NP_000836.2 425 PGYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTP-VTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQL-HLKVED 501 (908)
23196 Q Consensus 425 ~~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~-v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~-~~~~~~ 501 (908)
23197 ......|......++..+.+.|++..|.|.+| . +.||++|++...+.|.+++..+ +...++.||.|+... .++...
23198 T Consensus 401 ~~~~~~c~~~~~~~~~~l~~~l~~~~f~G~tG-~~v~fd~~g~~~~~~~i~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~ 479 (490)
23199 T 1EWT_A 401 PGHVGLCDAMKPIDGRKLLDFLIKSSFVGVSG-EEVWFDEKGDAPGRYDIMNLQYTEANRYDYVHVGTWHEGVLNIDDYK 479 (490)
23200 T ss_dssp SSCSSCCGGGSSCCHHHHHHHHHTCEEECTTS-CEEECCTTSCBCCEEEEEEEEECSSSCEEEEEEEEEETTEEEECGGG
23201 T ss_pred CCCCCCchhcCCCCHHHHHHHHhcCceecCCC-CeEEECCCCCCCCeEEEEEEEEccCCeeEEEEEEEEECCEEEEccce
23202 Confidence 21112232222235667888898889999998 7 9999999988888888887432 223689999999762 233346
23203
23204
23205 Q NP_000836.2 502 MQWAH 506 (908)
23206 Q Consensus 502 i~w~~ 506 (908)
23207 +.|++
23208 T Consensus 480 ~~w~~ 484 (490)
23209 T 1EWT_A 480 IQMNK 484 (490)
23210 T ss_dssp C----
23211 T ss_pred eeecC
23212 Confidence 78865
23213
23214
23215 No 26
23216 >5C5C_A Metabotropic glutamate receptor 7; GLUTAMATE RECEPTORS, GLUTAMIC ACID BINDING; HET: NAG, UNX; 1.862A {Homo sapiens}
23217 Probab=99.85 E-value=2e-26 Score=257.70 Aligned_cols=468 Identities=73% Similarity=1.247 Sum_probs=271.6 Template_Neff=11.400
23218
23219 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSL 117 (908)
23220 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
23221 ......++++||+++|.++.......|+......+.....|+++|++++|+++++++|+++++++.|++++.....+.+.
23222 T Consensus 9 ~~~~~~~~i~ig~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~A~~~in~~~~~~~g~~i~~~~~d~~~~~~~~~~~~~ 88 (481)
23223 T 5C5C_A 9 HSIRIEGDVTLGGLFPVHAKGPSGVPCGDIKRENGIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCSRDTYALEQSL 88 (481)
23224 T ss_dssp CEEEECCSEEEEEEECCEEECSSSCSEEEECCCCCCCHHHHHHHHHHHHHTCTTSSTTCCEEEEEEECTTCHHHHHHHHG
23225 T ss_pred ceeEeCCCEEEEEEeeeeecCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCCCCCCceeeeEEEcCCCCHHHHHHHHH
23226 Confidence 34566789999999999875332234543333356778899999999999988887789999999988765333233333
23227
23228
23229 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
23230 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
23231 +.+++++........|...........++++++||+.++.....++.++...++|+|++.+..+.+.+...+++++++.+
23232 T Consensus 89 ~~~~~l~~~~~~~~~c~~~~~~~~~~~~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~ 168 (481)
23233 T 5C5C_A 89 TFVQALIQKDTSDVRCTNGEPPVFVKPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVP 168 (481)
23234 T ss_dssp GGGTTTC------------------CCCCEEEEECCSSHHHHHHHHHHHHHTTCCEEESSCCCGGGGCTTTCTTEEESSC
23235 T ss_pred HHHHHHHccCCCCcccCCCCCCCccccccEEEEEcCCCcHHHHHHHHHHHHhCCCEEecCCCCcccCCCcccccccccCC
23236 Confidence 33333321000000000000000001257889999988877777888899999999998876655544335788999999
23237
23238
23239 Q NP_000836.2 198 PDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPRE--PRPGEFEKIIKRLLETPNA 275 (908)
23240 Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~--~~~~~~~~~~~~l~~~~~~ 275 (908)
23241 +...+++++++++++++|+++++++.++.++....+.+++.+++.+++++.....+... ....++...+++++...++
23242 T Consensus 169 ~~~~~~~~l~~~~~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 248 (481)
23243 T 5C5C_A 169 PDSFQAQAMVDIVKALGWNYVSTLASEGSYGEKGVESFTQISKEAGGLSIAQSVRIPQERKDRTIDFDRIIKQLLDTPNS 248 (481)
23244 T ss_dssp CHHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHHSSCEEEEEEEECCCCTTCCCCHHHHHHHHHTSSSC
23245 T ss_pred CCHHHHHHHHHHHHHhCCCEEEEEEeCCchhHHHHHHHHHHHHHcCCceEEEEEEcCCccCCchhcHHHHHHHHHcCCCc
23246 Confidence 99889999999998899999999998777888888888877765423444433222210 0123455566666521368
23247
23248
23249 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRR 355 (908)
23250 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (908)
23251 |+|++......+..+++++++.++..++.|++.+.|...............+.+.+.+.......|..++....+.....
23252 T Consensus 249 ~~vv~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (481)
23253 T 5C5C_A 249 RAVVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRR 328 (481)
23254 T ss_dssp CEEEEEECHHHHHHHHHHHHHSSSCCCEEEEESSCC---------CCCCCTTCEEEEECCCCCHHHHHHHHTCCTTTCTT
23255 T ss_pred eEEEEEcCHHHHHHHHHHHHHhccCCCEEEEEeccccCCCcccccccceecceEEEEeccccCccHHHHHhcCCCccCCC
23256 Confidence 88888777777888999998887653456776654432210000011122333332221111122222211100011123
23257
23258
23259 Q NP_000836.2 356 NVWFAEFWEENFGCKLGSHGKR-NSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRM 434 (908)
23260 Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~ 434 (908)
23261 ..+|.++|++.+++........ ..+...|................+++++|||+++++.++++.....+....+.|...
23262 T Consensus 329 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDav~~~a~al~~~~~~~~~~~~~~c~~~ 408 (481)
23263 T 5C5C_A 329 NVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCADYRGVCPEM 408 (481)
23264 T ss_dssp STTHHHHHHHHTTCBC----------CCBCCSCCCTTTTSCCCCCTTHHHHHHHHHHHHHHHHHHHHHHCCSCSSCCHHH
23265 T ss_pred ChHHHHHHHHHcCCcCcCCCCCcccCCCCCCCCccccCcccccccccHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChHH
23266 Confidence 3455666665554321100000 000111211100000000122346788999999999999998754332111223221
23267
23268
23269 Q NP_000836.2 435 STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQLHLKVEDMQWA 505 (908)
23270 Q Consensus 435 ~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~~~~~~~i~w~ 505 (908)
23271 ...++..+.+.|++.+|.|.+|..++||++|++...+.+++++..+ +...++.||.|+....+....+.|.
23272 T Consensus 409 ~~~~~~~l~~~l~~~~f~G~tG~~v~fd~~g~~~~~~~i~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~w~ 480 (481)
23273 T 5C5C_A 409 EQAGGKKLLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQTTNTSNPGYRLIGQWTDELQLNIEDMQWG 480 (481)
23274 T ss_dssp HHHHHHHHHHHHHTCCEECTTSSEECCCTTSBCCCCEEEEEEECCC---CEEEEEEEESSSEEECGGGSCC-
23275 T ss_pred HhhcHHHHHHHHhcCceecCCCCeEEeCCCCCCCCeEEEEEEEecCCCCCceEEeEEEccceeEehhhceec
23276 Confidence 1224456778888889999887459999999988788888887432 1245789999997654544467773
23277
23278
23279 No 27
23280 >3SM9_A Metabotropic glutamate receptor 3; Structural Genomics, Structural Genomics Consortium; HET: SO4, Z99; 2.26A {Homo sapiens}
23281 Probab=99.84 E-value=2.4e-26 Score=256.80 Aligned_cols=459 Identities=47% Similarity=0.859 Sum_probs=274.8 Template_Neff=11.200
23282
23283 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
23284 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
23285 ...+++++||+++|.++.......|+......+.....|+++|++++|+++++++|+++++.+.|+++++..+.+.+.++
23286 T Consensus 8 ~~~~~~i~ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~a~~~iN~~~~~~~g~~l~l~~~D~~~~~~~~~~~~~~l 87 (479)
23287 T 3SM9_A 8 IKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGVHILDTCSRDTYALEQSLEF 87 (479)
23288 T ss_dssp EEECCSEEEEEEECCEEECC-CCSEEEECCCCCCCHHHHHHHHHHHHHHCSSSSTTCCEEEEEEECTTCHHHHHHHHHHH
23289 T ss_pred eEecCCEEEEeeeeceecCCCCCCCCcccccccHHHHHHHHHHHHHHhcCCCCCCCCeEEEEEeeCCCCHHHHHHHHHHH
23290 Confidence 45678999999999987543234565433345677889999999999998888788999999999887655444333333
23291
23292
23293 Q NP_000836.2 120 VQALIEK-DASDVKCANGDPPIF-TKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
23294 Q Consensus 120 ~~~l~~~-~~~~~~~~~~~~~~~-~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
23295 +.+.... +.....|........ ....++++++|+.++.....++.++...++|+|++....+.+.+...+++++++.+
23296 T Consensus 88 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~avig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~~~~~~~~~ 167 (479)
23297 T 3SM9_A 88 VRASLTKVDEAEYMCPDGSYAIQENIPLLIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVP 167 (479)
23298 T ss_dssp HHTCC-----------------------CEEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTTTTEEESSC
23299 T ss_pred HHhcccCccchhhcCCCCChhhhcCCCcceEEEEcCCChHHHHHHHHHHHHhCCCEEecCccChhhcCcccCCceeeeCC
23300 Confidence 3210000 000000000000000 00025789999988877778888889999999998776655544335788999999
23301
23302
23303 Q NP_000836.2 198 PDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARA 277 (908)
23304 Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v 277 (908)
23305 +....+.++++++.+++|+++++++.++.++....+.+++.+++. ++++.....++......++...++++....++|+
23306 T Consensus 168 ~~~~~~~a~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 246 (479)
23307 T 3SM9_A 168 PDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLR-NISIATAEKVGRSNIRKSYDSVIRELLQKPNARV 246 (479)
23308 T ss_dssp CTHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHTT-TCEEEEEEEECC--CHHHHHHHHHHHHTCTTCCE
23309 T ss_pred ChHHHHHHHHHHHHHcCCcEEEEEEecCchhHHHHHHHHHHHHHC-CcEEEEEEEeCcccccccHHHHHHHHHhCCCccE
23310 Confidence 998899999999988999999999987778888888888887775 4555443323211112345556666621247888
23311
23312
23313 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNV 357 (908)
23314 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (908)
23315 |++......+..+++++++.|+ ++.|++.+.|...............|.+.+.........|..++....+...+.++
23316 T Consensus 247 vvl~~~~~~~~~~l~~~~~~g~--~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (479)
23317 T 3SM9_A 247 VVLFMRSDDSRELIAAASRANA--SFTWVASDGWGAQESIIKGSEHVAYGAITLELASQPVRQFDRYFQSLNPYNNHRNP 324 (479)
23318 T ss_dssp EEEECCHHHHHHHHHHHHHTTC--CCEEEECTTTTTCHHHHTTCTTTTTTCEEEEECCCCCHHHHHHHHTCCTTTCTTCT
23319 T ss_pred EEEEcChHHHHHHHHHHHHcCC--CEEEEEeCcccccchhHcCCcceeceeEEEEEccccChhHHHHHHhCCCCCCCCCH
23320 Confidence 8887777778889999888876 35677665444321110001122334333332222222333333222111223345
23321
23322
23323 Q NP_000836.2 358 WFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTI 437 (908)
23324 Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~ 437 (908)
23325 ++.++|++.+.+..... ......|...+..... ....+.++.++|||++++++|++++....+......|......
23326 T Consensus 325 ~~~~~~~~~~~~~~~~~---~~~~~~c~~~~~~~~~-~~~~~~~~~~~ydav~~~a~al~~~~~~~~~~~~~~c~~~~~~ 400 (479)
23327 T 3SM9_A 325 WFRDFWEQKFQCSLQNK---RNHRRVCDKHLAIDSS-NYEQESKIMFVVNAVYAMAHALHKMQRTLCPNTTKLCDAMKIL 400 (479)
23328 T ss_dssp THHHHHHHHHTCBCCC------CSCBCCTTCCCCTT-TCCCCTTHHHHHHHHHHHHHHHHHHHHHHSTTCSSCCHHHHSC
23329 T ss_pred HHHHHHHHHcCCccCCc---cCCCCccCccccccCc-cccccccchHHHHHHHHHHHHHHHHHHhhCCCCCCCchhhccc
23330 Confidence 66777776665432110 0001122211111000 0113456778999999999999998764332211223211111
23331
23332
23333 Q NP_000836.2 438 D-GKELLGYIRAVNFNG-------SAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAH 506 (908)
23334 Q Consensus 438 ~-~~~l~~~l~~~~f~G-------~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~~ 506 (908)
23335 + +..+.+.|++..|.| .+| .|.|+++|++...+.+++++..++...++.||.|+....++...+.|++
23336 T Consensus 401 ~~~~~l~~~l~~~~f~g~~~~~~~~~G-~v~f~~~g~r~~~~~i~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~w~~ 476 (479)
23337 T 3SM9_A 401 DGKKLYKDYLLKINFTAPFNPNKDADS-IVKFDTFGDGMGRYNVFNFQNVGGKYSYLKVGHWAETLSLDVNSIHWSR 476 (479)
23338 T ss_dssp CHHHCCCCCGGGCCEECTTC-----CC-EECCCTTCBCCCCEEEEEEEESSSCEEEEEEEEESSSEEECGGGCCCC-
23339 T ss_pred ChHHHHHHHHhcCcccCCCCCCCCCCC-eeEeCCCCCCCCcEEEEEEEEeCCeEEEEEEEEEeeeeEecccceeecc
23340 Confidence 1 224667788888988 777 8999999999888899988743212358899999876444434577754
23341
23342
23343 No 28
23344 >4XAQ_A Metabotropic glutamate receptor 2; mGluR2 mGluR3, SIGNALING PROTEIN; HET: 40F, SO4; 2.21A {Homo sapiens}
23345 Probab=99.83 E-value=9.3e-26 Score=253.40 Aligned_cols=453 Identities=45% Similarity=0.841 Sum_probs=270.3 Template_Neff=10.900
23346
23347 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
23348 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
23349 ....++++||+++|.+........|+......+.....|+++|++++|+++++++|+++++.+.|+++++..+.+.+.++
23350 T Consensus 28 ~~~~~~i~Ig~~~p~~~~~g~~~~c~~~~~~~~~~~~~~~~~a~~~in~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~l 107 (503)
23351 T 4XAQ_A 28 LTLEGDLVLGGLFPVHQKGGPAEDCGPVNEHRGIQRLEAMLFALDRINRDPHLLPGVRLGAHILDSCSKDTHALEQALDF 107 (503)
23352 T ss_dssp EEECCSEEEEEEECCEEECCTTCSEEEECCCCCCCHHHHHHHHHHHHHHCTTSSTTCCEEEEEEECTTCHHHHHHHHHHH
23353 T ss_pred EEeCCCEEEEEEeeceeCCCCcccCCcccccccHHHHHHHHHHHHHHhcCCCCCCCCeeeEEEEeCCCCHHHHHHHHHHH
23354 Confidence 46778999999999972211122354332235667889999999999998777778999999999887655443333333
23355
23356
23357 Q NP_000836.2 120 VQALIEK--DASDVKCANGDPPIFT-KPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVV 196 (908)
23358 Q Consensus 120 ~~~l~~~--~~~~~~~~~~~~~~~~-~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~ 196 (908)
23359 +...... ......|...++.|.. ..+++++++|+.++.....++.+++..++|+|++.+..+.+.++..+++++++.
23360 T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~ 187 (503)
23361 T 4XAQ_A 108 VRASLSRGADGSRHICPDGSYATHGDAPTAITGVIGGSYSDVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTV 187 (503)
23362 T ss_dssp HTTTC-----------------------CCCCEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTCTTEEESS
23363 T ss_pred HHHHhccCCCCCceeCCCCccccCCCCCCceEEEEcCCCcHHHHHHHHHHHHhCCCEEecCCCCccccCccccCceeeeC
23364 Confidence 3210000 0000000000000000 013688999988887777888889999999999877666555444578899999
23365
23366
23367 Q NP_000836.2 197 PPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNAR 276 (908)
23368 Q Consensus 197 ~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (908)
23369 ++....+.++++++++++|+++++++.+++++....+.+++.+++. ++++.....++......++...++++....+++
23370 T Consensus 188 ~~~~~~~~~l~~~l~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 266 (503)
23371 T 4XAQ_A 188 PPDFFQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFELEARAR-NISVATSEKVGRAMSRAAFEGVVRALLQKPSAR 266 (503)
23372 T ss_dssp CCHHHHHHHHHHHHHHHTCCEEEEEEESSTTHHHHHHHHHHHHHHT-TCEEEEEEEECTTCCHHHHHHHHHHHHTCTTCC
23373 T ss_pred CChHHHHHHHHHHHHHcCCcEEEEEEeCCcchhHHHHHHHHHHHHC-CcEEEeEEecccccCHHHHHHHHHHHHcCCCce
23374 Confidence 9998889999999988999999999987778888888888877765 355543332321012234556666664224788
23375
23376
23377 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRN 356 (908)
23378 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (908)
23379 +|++......+..+++++++.|+ ++.|++.+.|...............+.+.+.......+.|..++....+...+..
23380 T Consensus 267 ~iv~~~~~~~~~~~l~~~~~~g~--~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (503)
23381 T 4XAQ_A 267 VAVLFTRSEDARELLAASQRLNA--SFTWVASDGWGALEEVVAGSEGAAEGAITIELASYPISDFASYFQSLDPWNNSRN 344 (503)
23382 T ss_dssp EEEEECCHHHHHHHHHHHHHTTC--CCEEEECTTTTTCHHHHTTCHHHHTTCEEEEESCCCCTTHHHHHHTCCTTTCCSC
23383 T ss_pred EEEEEcChHHHHHHHHHHHHhCC--CEEEEEeCCcccchHHHhcCcccccceEEEEeccccCccHHHHHHcCCcCCCCCC
23384 Confidence 88887777778888988888877 3567766544332110000112233444333222222233322221111111233
23385
23386
23387 Q NP_000836.2 357 VWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMST 436 (908)
23388 Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~ 436 (908)
23389 .++.++|++.+.+.... ..|..... .. ....+..++..+|||+++++.|+++.....+......|.....
23390 T Consensus 345 ~~~~~~~~~~~~~~~~~--------~~~~~~~~-~~-~~~~~~~~a~~~yDav~~~a~al~~~~~~~~~~~~~~c~~~~~ 414 (503)
23391 T 4XAQ_A 345 PWFREFWEQRFRCSFRQ--------RDCAAHSL-RA-VPFEQESKIMFVVNAVYAMAHALHNMHRALCPNTTRLCDAMRP 414 (503)
23392 T ss_dssp TTHHHHHHHHTTCCSSS--------CCCSSCCT-TT-SCCCCCTTHHHHHHHHHHHHHHHHHHHHHHCCSCSSCCGGGSS
23393 T ss_pred HHHHHHHHHHhCCccCC--------CCCCCccc-cc-CCcccccchhHHHHHHHHHHHHHHHHHHHHCCCCCCCchhcCC
23394 Confidence 45666666655542110 01211100 00 0012334577899999999999999875433221122322112
23395
23396
23397 Q NP_000836.2 437 IDGKE-LLGYIRAVNFN------GSAGTPVTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQLHLKVEDMQWAH 506 (908)
23398 Q Consensus 437 ~~~~~-l~~~l~~~~f~------G~~G~~v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~~~~~~~i~w~~ 506 (908)
23399 .++.. +.+.|++..|. |.+| .++||++|++...+.+++++..+ +...++.||.|++...++...+.|++
23400 T Consensus 415 ~~~~~~~~~~l~~~~f~~~~~~~G~~G-~v~fd~~g~~~~~~~v~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~w~~ 491 (503)
23401 T 4XAQ_A 415 VNGRRLYKDFVLNVKFDAPFRPADTHN-EVRFDRFGDGIGRYNIFTYLRAGSGRYRYQKVGYWAEGLTLDTSLIPWAS 491 (503)
23402 T ss_dssp CCHHHCCCCCGGGCCEECTTCCSSCCC-EECCCTTSCCCCCEEEEEEEECTTSCEEEEEEEEESSSEEECGGGSCC--
23403 T ss_pred cCHHHHHHHHHHhCeecCCCCCCCCCC-cEEeCCCCCCCCeEEEEEEEEcCCCceEEEEEEEEcCCcEEccceeeecC
23404 Confidence 23334 33567777787 7888 89999999998888888887431 12258899999976544444678865
23405
23406
23407 No 29
23408 >5CNI_A Metabotropic glutamate receptor 2; receptor, glutamate, metabotropic, SIGNALING PROTEIN; HET: GGL, NAG; 2.69A {Homo sapiens}
23409 Probab=99.83 E-value=9.3e-26 Score=253.40 Aligned_cols=453 Identities=45% Similarity=0.841 Sum_probs=270.0 Template_Neff=10.900
23410
23411 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
23412 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
23413 ....++++||+++|.+........|+......+.....|+++|++++|+++++++|+++++.+.|+++++..+.+.+.++
23414 T Consensus 28 ~~~~~~i~Ig~~~p~~~~~g~~~~c~~~~~~~~~~~~~~~~~a~~~in~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~l 107 (503)
23415 T 5CNI_A 28 LTLEGDLVLGGLFPVHQKGGPAEDCGPVNEHRGIQRLEAMLFALDRINRDPHLLPGVRLGAHILDSCSKDTHALEQALDF 107 (503)
23416 T ss_dssp EEECCSEEEEEEECCEEECCSSCSEEEECCCCCCCHHHHHHHHHHHHTTCTTSSTTCCEEEEEEECTTCHHHHHHHHHHH
23417 T ss_pred EEeCCCEEEEEEeeceeCCCCcccCCcccccccHHHHHHHHHHHHHHhcCCCCCCCCeeeEEEEeCCCCHHHHHHHHHHH
23418 Confidence 46778999999999972211122354332235667889999999999998777778999999999887655443333333
23419
23420
23421 Q NP_000836.2 120 VQALIEK--DASDVKCANGDPPIFT-KPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVV 196 (908)
23422 Q Consensus 120 ~~~l~~~--~~~~~~~~~~~~~~~~-~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~ 196 (908)
23423 +...... ......|...++.|.. ..+++++++|+.++.....++.+++..++|+|++.+..+.+.++..+++++++.
23424 T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~ 187 (503)
23425 T 5CNI_A 108 VRASLSRGADGSRHICPDGSYATHGDAPTAITGVIGGSYSDVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTV 187 (503)
23426 T ss_dssp HSCC------------------------CCCCEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTCTTEEESS
23427 T ss_pred HHHHhccCCCCCceeCCCCccccCCCCCCceEEEEcCCCcHHHHHHHHHHHHhCCCEEecCCCCccccCccccCceeeeC
23428 Confidence 3210000 0000000000000000 013688999988887777888889999999999877666555444578899999
23429
23430
23431 Q NP_000836.2 197 PPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNAR 276 (908)
23432 Q Consensus 197 ~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (908)
23433 ++....+.++++++++++|+++++++.+++++....+.+++.+++. ++++.....++......++...++++....+++
23434 T Consensus 188 ~~~~~~~~~l~~~l~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 266 (503)
23435 T 5CNI_A 188 PPDFFQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFELEARAR-NISVATSEKVGRAMSRAAFEGVVRALLQKPSAR 266 (503)
23436 T ss_dssp CCTHHHHHHHHHHHHHTTCCEEEEEEESSTTHHHHHHHHHHHHHTT-TCEEEEEEEECSSCCHHHHHHHHHHHHTCTTCC
23437 T ss_pred CChHHHHHHHHHHHHHcCCcEEEEEEeCCcchhHHHHHHHHHHHHC-CcEEEeEEecccccCHHHHHHHHHHHHcCCCce
23438 Confidence 9998889999999988999999999987778888888888877765 355543332321012234556666664224788
23439
23440
23441 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRN 356 (908)
23442 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (908)
23443 +|++......+..+++++++.|+ ++.|++.+.|...............+.+.+.......+.|..++....+...+..
23444 T Consensus 267 ~iv~~~~~~~~~~~l~~~~~~g~--~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (503)
23445 T 5CNI_A 267 VAVLFTRSEDARELLAASQRLNA--SFTWVASDGWGALEEVVAGSEGAAEGAITIELASYPISDFASYFQSLDPWNNSRN 344 (503)
23446 T ss_dssp EEEEECCHHHHHHHHHHHHHTTC--CCEEEECTTTTTCHHHHTTCHHHHTTCEEEEECCCCCHHHHHHHHTCCTTTCCSC
23447 T ss_pred EEEEEcChHHHHHHHHHHHHhCC--CEEEEEeCCcccchHHHhcCcccccceEEEEeccccCccHHHHHHcCCcCCCCCC
23448 Confidence 88887777778888988888877 3567766544332110000112233444333222222233322221111111233
23449
23450
23451 Q NP_000836.2 357 VWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMST 436 (908)
23452 Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~ 436 (908)
23453 .++.++|++.+.+.... ..|..... .. ....+..++..+|||+++++.|+++.....+......|.....
23454 T Consensus 345 ~~~~~~~~~~~~~~~~~--------~~~~~~~~-~~-~~~~~~~~a~~~yDav~~~a~al~~~~~~~~~~~~~~c~~~~~ 414 (503)
23455 T 5CNI_A 345 PWFREFWEQRFRCSFRQ--------RDCAAHSL-RA-VPFEQESKIMFVVNAVYAMAHALHNMHRALCPNTTRLCDAMRP 414 (503)
23456 T ss_dssp TTHHHHHHHHHTCCCC---------CCSTTCCT-TT-SCCCCCTTHHHHHHHHHHHHHHHHHHHHHHCTTCSSCCGGGSS
23457 T ss_pred HHHHHHHHHHhCCccCC--------CCCCCccc-cc-CCcccccchhHHHHHHHHHHHHHHHHHHHHCCCCCCCchhcCC
23458 Confidence 45666666655542110 01211100 00 0012334577899999999999999875433221122322112
23459
23460
23461 Q NP_000836.2 437 IDGKE-LLGYIRAVNFN------GSAGTPVTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQLHLKVEDMQWAH 506 (908)
23462 Q Consensus 437 ~~~~~-l~~~l~~~~f~------G~~G~~v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~~~~~~~i~w~~ 506 (908)
23463 .++.. +.+.|++..|. |.+| .++||++|++...+.+++++..+ +...++.||.|++...++...+.|++
23464 T Consensus 415 ~~~~~~~~~~l~~~~f~~~~~~~G~~G-~v~fd~~g~~~~~~~v~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~w~~ 491 (503)
23465 T 5CNI_A 415 VNGRRLYKDFVLNVKFDAPFRPADTHN-EVRFDRFGDGIGRYNIFTYLRAGSGRYRYQKVGYWAEGLTLDTSLIPWAS 491 (503)
23466 T ss_dssp CCHHHCCCCCGGGCCEECTTCCTTCCC-EECCCTTSCCCCEEEEEEEEECC--CEEEEEEEEEESSEEECTTSSCC--
23467 T ss_pred cCHHHHHHHHHHhCeecCCCCCCCCCC-cEEeCCCCCCCCeEEEEEEEEcCCCceEEEEEEEEcCCcEEccceeeecC
23468 Confidence 23334 33567777787 7888 89999999998888888887431 12258899999976544444678865
23469
23470
23471 No 30
23472 >5CNJ_A Metabotropic glutamate receptor 2; glutamate receptor analog, SIGNALING PROTEIN; HET: 52Q, NAG; 2.65A {Homo sapiens}
23473 Probab=99.83 E-value=1.1e-25 Score=252.80 Aligned_cols=454 Identities=45% Similarity=0.841 Sum_probs=271.0 Template_Neff=10.800
23474
23475 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
23476 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
23477 .....++++||+++|.+........|+......+.....|+++|++++|+++++++|+++++.+.|+++++..+.+.+.+
23478 T Consensus 27 ~~~~~~~i~Ig~~~p~~~~~g~~~~c~~~~~~~~~~~~~~~~~a~~~in~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 106 (503)
23479 T 5CNJ_A 27 VLTLEGDLVLGGLFPVHQKGGPAEDCGPVNEHRGIQRLEAMLFALDRINRDPHLLPGVRLGAHILDSCSKDTHALEQALD 106 (503)
23480 T ss_dssp CEEECCSEEEEEEECCEEECCTTCSEEEECCCCCCCHHHHHHHHHHHHTTCSSSSSSCCEEEEEEECTTCHHHHHHHGGG
23481 T ss_pred eEEeCCCEEEEEeeecccCCCCCCCCCCccccccHHHHHHHHHHHHHHhcCCCCCCCCeeeEEEEcCCCCHHHHHHHHHH
23482 Confidence 35677899999999997321112235433223456788999999999999877777899999999988775544433333
23483
23484
23485 Q NP_000836.2 119 FVQALIE--KDASDVKCANGDPPIF-TKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRV 195 (908)
23486 Q Consensus 119 ~~~~l~~--~~~~~~~~~~~~~~~~-~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~ 195 (908)
23487 ++..... .......|...++.+. ...++++++||+.++.....++.++...++|+|++.+..+.+.++..+++++++
23488 T Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~ 186 (503)
23489 T 5CNJ_A 107 FVRASLSRGADGSRHICPDGSYATHGDAPTAITGVIGGSYSDVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFART 186 (503)
23490 T ss_dssp GTTTTC----------------------CCCEEEEEECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGGCTTTCTTEEES
23491 T ss_pred HHHHHhccCCCCCceeCCCCccccCCCCCCceEEEEcCCCcHHHHHHHHHHHHhCCCEEecCcCCccccCCccCCceeee
23492 Confidence 3321000 0000000000000000 001468899998887777778888899999999988766655443357889999
23493
23494
23495 Q NP_000836.2 196 VPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNA 275 (908)
23496 Q Consensus 196 ~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (908)
23497 .++....+.++++++++++|++|++++.+++++....+.+++.+++. ++++.....++......++...++++.+..++
23498 T Consensus 187 ~p~~~~~~~a~~~~l~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 265 (503)
23499 T 5CNJ_A 187 VPPDFFQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFELEARAR-NISVATSEKVGRAMSRAAFEGVVRALLQKPSA 265 (503)
23500 T ss_dssp SCCHHHHHHHHHHHHHHTTCCEEEEEEESSTTHHHHHHHHHHHHHHT-TCEEEEEEEECSSCCHHHHHHHHHHHHTSSSC
23501 T ss_pred CCChHHHHHHHHHHHHHcCCcEEEEEEeCCcchhHHHHHHHHHHHHC-CcEEEEEEecccccCHHHHHHHHHHHHcCCCc
23502 Confidence 99998889999999988899999999987778888888888887765 35554332232101223455666666422478
23503
23504
23505 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRR 355 (908)
23506 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (908)
23507 |+|++......+..+++++++.|+ ++.|++.+.|...............|.+.+.......+.|..++....+...+.
23508 T Consensus 266 ~~iv~~~~~~~~~~~l~~~~~~g~--~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (503)
23509 T 5CNJ_A 266 RVAVLFTRSEDARELLAASQRLNA--SFTWVASDGWGALESVVAGSEGAAEGAITIELASYPISDFASYFQSLDPWNNSR 343 (503)
23510 T ss_dssp CEEEEECCHHHHHHHHHHHHHTTC--CCEEEECTTTTTCHHHHTTCHHHHTTCEEEEECCCCCHHHHHHHHTCCTTTCTT
23511 T ss_pred eEEEEEcChHHHHHHHHHHHHhCC--CEEEEEeCccccchhHHccCcccccceEEEEeccccCccHHHHHhcCCCCCCCC
23512 Confidence 888887766677888888888776 356776654433211000011233344433322222222322222111111123
23513
23514
23515 Q NP_000836.2 356 NVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMS 435 (908)
23516 Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~ 435 (908)
23517 ..++.++|++.+.+.... ..|.... ... .......++..+|||++++++|+++.....+......|....
23518 T Consensus 344 ~~~f~~~~~~~~~~~~~~--------~~~~~~~-~~~-~~~~~~~~~~~~yDav~~~a~al~~~~~~~~~~~~~~c~~~~ 413 (503)
23519 T 5CNJ_A 344 NPWFREFWEQRFRCSFRQ--------RDCAAHS-LRA-VPFEQESKIMFVVNAVYAMAHALHNMHRALCPNTTRLCDAMR 413 (503)
23520 T ss_dssp CTTHHHHHHHHTTCCGGG--------TCSTTCC-TTT-SCCCCCTTHHHHHHHHHHHHHHHHHHHHHHCCSCSSCCGGGS
23521 T ss_pred CHHHHHHHHHHhCCccCc--------ccCCCcc-ccc-CCccccccchHHHHHHHHHHHHHHHHHHHhCCCCCCcchhcC
23522 Confidence 345666666655442110 0111100 000 001123456789999999999999886543221112232211
23523
23524
23525 Q NP_000836.2 436 TIDGKE-LLGYIRAVNFN------GSAGTPVTFNENGDAPGRYDIFQYQITN-KSTEYKVIGHWTNQLHLKVEDMQWAH 506 (908)
23526 Q Consensus 436 ~~~~~~-l~~~l~~~~f~------G~~G~~v~Fd~~G~~~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~~~~~~~i~w~~ 506 (908)
23527 ..++.. +.+.|++.+|. |.+| .++||++|++...+.+++++..+ +...+++||.|+....++...+.|++
23528 T Consensus 414 ~~~~~~~l~~~l~~~~f~~~~~~~g~tG-~i~fd~~g~r~~~~~i~~~~~~~~~~~~~~~vg~w~~~~~~~~~~~~w~~ 491 (503)
23529 T 5CNJ_A 414 PVNGRRLYKDFVLNVKFDAPFRPADTHN-EVRFDRFGDGIGRYNIFTYLRAGSGRYRYQKVGYWAEGLTLDTSLIPWAS 491 (503)
23530 T ss_dssp SCCHHHCCCCCGGGCEEECTTCCTTCCC-EEECCTTSCCCCEEEEEEEEECTTSCEEEEEEEEEESSEEECGGGSTTC-
23531 T ss_pred ccCHHHHHHHHHHhCeecCCCCCCCCCC-cEEeCCCCCCCCeEEEEEEEEcCCCceEEEEEEEEccCcEEccccceecC
23532 Confidence 123333 44667777887 5788 89999999998888888887432 12358999999976555445678875
23533
23534
23535 No 31
23536 >5FBK_A Extracellular calcium-sensing receptor; membrane protein, G-protein coupled receptor; HET: NAG, CSO, TCR; 2.1A {Homo sapiens}
23537 Probab=99.81 E-value=3.8e-25 Score=252.03 Aligned_cols=460 Identities=32% Similarity=0.552 Sum_probs=275.6 Template_Neff=10.500
23538
23539 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGE----------RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRD 109 (908)
23540 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~----------~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~ 109 (908)
23541 ...+++++||+++|.++... ....|+... ..+.....|++.|++++|+++++++|+++++++.|+++++
23542 T Consensus 53 ~~~~~~i~Ig~l~p~~~~~~~~~~~~~~~~~~~~c~~~~-~~~~~~~~~~~~a~~~in~~~~~~~g~~i~~~~~D~~~~~ 131 (568)
23543 T 5FBK_A 53 AQKKGDIILGGLFPIHFGVAAKDQDLKSRPESVECIRYN-FRGFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNTV 131 (568)
23544 T ss_dssp EEECCSEEEEEEECSEEEECCCCCCCSSCCCCCCEEEEC-HHHHHHHHHHHHHHHHHHTCSSSSSSCCEEEEEEECTTCH
23545 T ss_pred eeecCCEEEEEeeeeeecccccCCCccCCCCcccceecc-cccHHHHHHHHHHHHHHhcCCCCCCCCEEeeEEEeCCCCH
23546 Confidence 45678999999999986431 123455422 2456788999999999999888888899999999988775
23547
23548
23549 Q NP_000836.2 110 TYALEQSLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRY 189 (908)
23550 Q Consensus 110 ~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~ 189 (908)
23551 ..+.+.+.+++.+- ..+.....+.+.+....++++++||+.++..+..++.++...++|+|++.+..+.+.+...+
23552 T Consensus 132 ~~a~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~ 207 (568)
23553 T 5FBK_A 132 SKALEATLSFVAQN----KIDSLNLDEFCNCSEHIPSTIAVVGATGSGVSTAVANLLGLFYIPQVSYASSSRLLSNKNQF 207 (568)
23554 T ss_dssp HHHHHHHHHHTHHH----HHHHHTHHHHSCCCSCCCCEEEEECCSSHHHHHHHHHHHHHTTCCEEESSCCCGGGGCTTTC
23555 T ss_pred HHHHHHHHHHHHhc----CcccCCccccccCCCCCCCeEEEEcCCCcHHHHHHHHHHhhhCCcEeccccCCcccCCcccC
23556 Confidence 54443333333210 00000000000011111357899998888777788888899999999988766555443357
23557
23558
23559 Q NP_000836.2 190 DFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRL 269 (908)
23560 Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l 269 (908)
23561 ++++++.+++...+.++++++++++|++|++++.++.++....+.+++.+++. ++++.....+.......++...++++
23562 T Consensus 208 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~v~vi~~~~~~~~~~~~~~~~~~~~~-gi~v~~~~~~~~~~~~~~~~~~~~~l 286 (568)
23563 T 5FBK_A 208 KSFLRTIPNDEHQATAMADIIEYFRWNWVGTIAADDDYGRPGIEKFREEAEER-DICIDFSELISQYSDEEEIQHVVEVI 286 (568)
23564 T ss_dssp TTEEESSCCTHHHHHHHHHHHHHTTCCSEEEEEESSTTHHHHHHHHHHHHHHT-TCCEEEEEEECTTCCHHHHHHHHHHH
23565 T ss_pred CceeecCCCchHHHHHHHHHHHHcCCcEEEEEEecCccchhHHHHHHHHHHHC-CeEEEEEEeecCCCCHHHHHHHHHHH
23566 Confidence 88999999998889999999988999999999977778888888888888775 46665433222101223455667777
23567
23568
23569 Q NP_000836.2 270 LETPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPV-YQQEEIAEGAVTILPKRASIDGFDRYFRSR 348 (908)
23570 Q Consensus 270 ~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 348 (908)
23571 +. .++|+|++.+....+..+++++++.|+.. ..|++.+.|....... ........+.+.+.........|..|....
23572 T Consensus 287 ~~-~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~~~~~~ 364 (568)
23573 T 5FBK_A 287 QN-STAKVIVVFSSGPDLEPLIKEIVRRNITG-KIWLASEAWASSSLIAMPQYFHVVGGTIGFALKAGQIPGFREFLKKV 364 (568)
23574 T ss_dssp HH-CCCCEEEEECCHHHHHHHHHHHHHTTCCS-CEEEECHHHHTCTTTCCGGGHHHHTTCEEEEECCBCCTTHHHHHHTC
23575 T ss_pred Hh-CCCeEEEEEcCchhHHHHHHHHHHcCCCC-CEEEEehhhcccccccCccceeeeceEEEEEeccccCccHHHHHHhc
23576 Confidence 63 57899888877777888999988888753 4566665443321100 000111223333332222233333333221
23577
23578
23579 Q NP_000836.2 349 TLANNRRNVWFAEFWEENFGCKLGSHGK----------------------RNSHIKKCTGLERIAR----DSSYEQEGKV 402 (908)
23580 Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~c~~~~~~~~----~~~~~~~~~~ 402 (908)
23581 .+.......++.++|++.+.|....... ...+...|+..+.... ........++
23582 T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~a 444 (568)
23583 T 5FBK_A 365 HPRKSVHNGFAKEFWEETFNCHLQEGAKGPLPVDTFLRGHEESGDRFSNSSTAFRPLCTGDENISSVETPYIDYTHLRIS 444 (568)
23584 T ss_dssp CTTTCSSBTTHHHHHHHHHTCBC-------------------------------CCBCCSCCCGGGSCCTTTCCSCBSHH
23585 T ss_pred CCccCCCChhHHHHHHHHhCCccCCCCCCCCCchhcccCccccCCccCCCCcCCCCCCCCCCCcccCCCCcccccccchH
23586 Confidence 1111112223445555544442210000 0001112322111000 0001123567
23587
23588
23589 Q NP_000836.2 403 QFVIDAVYSMAYALHNMHKDLCPG---YIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQIT 479 (908)
23590 Q Consensus 403 ~~~yDAv~~la~Al~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~ 479 (908)
23591 .++||||+++++|++++....+.. ....|.......+..+.+.|++.+|.|.+|+.|+||++|+|...+.|++++..
23592 T Consensus 445 ~~~yDaV~~~a~al~~~~~~~~~~~~~~~~~c~~~~~~~~~~l~~~l~~~~f~G~tG~~v~fd~~g~r~~~~~I~~~~~~ 524 (568)
23593 T 5FBK_A 445 YNVYLAVYSIAHALQDIYTCLPGRGLFTNGSCADIKKVEAWQVLKHLRHLNFTNNMGEQVTFDECGDLVGNYSIINWHLS 524 (568)
23594 T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSSSSGGGCCCCGGGCCHHHHHHHHHTCEEECTTSCEEECCTTSCCCCCEEEEEEEEC
23595 T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccccCHHHHHHHHhcCeeecCCCCEEEeCCCCCCCccEEEEEEEEc
23596 Confidence 899999999999999987543321 01223221122344577888888999988657999999999888999888743
23597
23598
23599 Q NP_000836.2 480 N--KSTEYKVIGHWTNQL------HLKVEDMQWAHR 507 (908)
23600 Q Consensus 480 ~--~~~~~~~Vg~~~~~~------~~~~~~i~w~~~ 507 (908)
23601 . +...++.||.|+... .++...+.|.++
23602 T Consensus 525 ~~~~~~~~~~vg~~~~~~~~~~~l~~~~~~i~w~~g 560 (568)
23603 T 5FBK_A 525 PEDGSIVFKEVGYYNVYAKKGERLFINEEKILWSGF 560 (568)
23604 T ss_dssp TTTCSEEEEEEEEECTTSCTTSSEEECGGGCCBTTT
23605 T ss_pred CCCCcEEEEEEEEEEccccCCCeEEEeccceeecCC
23606 Confidence 1 112588999998652 122335777654
23607
23608
23609 No 32
23610 >5FBK_B Extracellular calcium-sensing receptor; membrane protein, G-protein coupled receptor; HET: TCR, NAG, CSO; 2.1A {Homo sapiens}
23611 Probab=99.81 E-value=4.7e-25 Score=251.32 Aligned_cols=460 Identities=32% Similarity=0.552 Sum_probs=272.9 Template_Neff=10.500
23612
23613 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGE----------RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRD 109 (908)
23614 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~----------~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~ 109 (908)
23615 ....++++||+++|.++... ....|+... ..+.....|++.|++++|+++++++|+++++++.|+++++
23616 T Consensus 53 ~~~~~~i~Ig~l~p~~~~~~~~~~~~~~~~~~~~c~~~~-~~~~~~~~~~~~a~~~in~~~~~~~g~~i~~~~~D~~~~~ 131 (568)
23617 T 5FBK_B 53 AQKKGDIILGGLFPIHFGVAAKDQDLKSRPESVECIRYN-FRGFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNTV 131 (568)
23618 T ss_dssp EEECCSEEEEEEECSEEEECCCCCCCSSCCCCCCEEEEC-HHHHHHHHHHHHHHHHHHTCSSSSSSCCEEEEEEECTTCH
23619 T ss_pred eeecCCEEEEEEeeeeecccccCCCccCCCCcccceecc-cchHHHHHHHHHHHHHHhcCCCCCCCCEEeEEEEeCCCCH
23620 Confidence 45678999999999986431 123455422 2456788999999999999888888899999999988775
23621
23622
23623 Q NP_000836.2 110 TYALEQSLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRY 189 (908)
23624 Q Consensus 110 ~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~ 189 (908)
23625 ..+.+.+.+++.+- +.+.....+.+.+....++++++||+.++..+..++.++...++|+|++.+..+.+.+...+
23626 T Consensus 132 ~~a~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~ 207 (568)
23627 T 5FBK_B 132 SKALEATLSFVAQN----KIDSLNLDEFCNCSEHIPSTIAVVGATGSGVSTAVANLLGLFYIPQVSYASSSRLLSNKNQF 207 (568)
23628 T ss_dssp HHHHHHHHHHTHHH----HHCC---------------EEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTC
23629 T ss_pred HHHHHHHHHHHHhc----CcccCCccccccCCCCCCCeEEEEcCCCcHHHHHHHHHHhhhCCcEeccccCCcccCCcccC
23630 Confidence 54443333333210 00000000000011111357899998888777788888999999999988766555443357
23631
23632
23633 Q NP_000836.2 190 DFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRL 269 (908)
23634 Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l 269 (908)
23635 ++++++.+++...+.++++++++++|++|++++.++.++....+.+++.+++. ++++.....+.......++...++++
23636 T Consensus 208 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~-gi~v~~~~~~~~~~~~~~~~~~~~~l 286 (568)
23637 T 5FBK_B 208 KSFLRTIPNDEHQATAMADIIEYFRWNWVGTIAADDDYGRPGIEKFREEAEER-DICIDFSELISQYSDEEEIQHVVEVI 286 (568)
23638 T ss_dssp TTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEESSTTHHHHHHHHHHHHHHT-TCEEEEEEEECTTCCHHHHHHHHHHH
23639 T ss_pred CceeecCCCcHHHHHHHHHHHHHcCCeEEEEEEeCCccchhHHHHHHHHHHHC-CeEEEEEEeecCCCCHHHHHHHHHHH
23640 Confidence 88999999998889999999988999999999977778888888888888775 46665433222101223455667777
23641
23642
23643 Q NP_000836.2 270 LETPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPV-YQQEEIAEGAVTILPKRASIDGFDRYFRSR 348 (908)
23644 Q Consensus 270 ~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 348 (908)
23645 +. .++|+|++.+....+..+++++++.|+.. ..|+..+.|....... ........+.+.+.........|..|....
23646 T Consensus 287 ~~-~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~~~~~~ 364 (568)
23647 T 5FBK_B 287 QN-STAKVIVVFSSGPDLEPLIKEIVRRNITG-KIWLASEAWASSSLIAMPQYFHVVGGTIGFALKAGQIPGFREFLKKV 364 (568)
23648 T ss_dssp HH-CCCCEEEEECCHHHHHHHHHHHHHTTCCC-CEEEECHHHHTCTTTCCGGGHHHHTTCEEEEECCBCCTTHHHHHHTC
23649 T ss_pred Hh-CCCeEEEEecCchhHHHHHHHHHHcCCCC-CEEEEechhcccccccCccceeeeccEEEEEecCCcCchHHHHHHhc
23650 Confidence 63 57899888877777888999988888753 4566655443321100 000111223333322222233333332221
23651
23652
23653 Q NP_000836.2 349 TLANNRRNVWFAEFWEENFGCKLGSHGK----------------------RNSHIKKCTGLERIAR----DSSYEQEGKV 402 (908)
23654 Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~c~~~~~~~~----~~~~~~~~~~ 402 (908)
23655 .+.......++.++|++.+.|....... ...+...|+..+.... ........++
23656 T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~a 444 (568)
23657 T 5FBK_B 365 HPRKSVHNGFAKEFWEETFNCHLQEGAKGPLPVDTFLRGHEESGDRFSNSSTAFRPLCTGDENISSVETPYIDYTHLRIS 444 (568)
23658 T ss_dssp CTTTCSSBTTHHHHHHHHHTCBCC-----------------------------CCCBCCSCCCGGGSCCTTTCCSCBSHH
23659 T ss_pred CCccCCCChhHHHHHHHHhCCccCCCCCCCCCchhcccCCcccCCccCCCCCCCCCCCCCCCCcccCCCCcccccccchH
23660 Confidence 1111112223445555544442210000 0001112322111000 0001123567
23661
23662
23663 Q NP_000836.2 403 QFVIDAVYSMAYALHNMHKDLCPG---YIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQIT 479 (908)
23664 Q Consensus 403 ~~~yDAv~~la~Al~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~ 479 (908)
23665 .++||||+++++|++++....+.. ....|.......+..+.+.|++.+|.|.+|+.|+||++|+|...+.|++++..
23666 T Consensus 445 ~~~yDaV~~~a~al~~~~~~~~~~~~~~~~~c~~~~~~~~~~l~~~l~~~~f~G~tG~~v~f~~~G~r~~~~~I~~~~~~ 524 (568)
23667 T 5FBK_B 445 YNVYLAVYSIAHALQDIYTCLPGRGLFTNGSCADIKKVEAWQVLKHLRHLNFTNNMGEQVTFDECGDLVGNYSIINWHLS 524 (568)
23668 T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSSSSGGGCCCCGGGCCHHHHHHHHHTCCEECTTSCEECCCTTSCCCCCEEEEEEEEC
23669 T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccccCHHHHHHHHhhCeeecCCCCEEEeCCCCCCCCcEEEEEEEEc
23670 Confidence 899999999999999987543321 01223221122344577888888999988757999999999888999888743
23671
23672
23673 Q NP_000836.2 480 N--KSTEYKVIGHWTNQL------HLKVEDMQWAHR 507 (908)
23674 Q Consensus 480 ~--~~~~~~~Vg~~~~~~------~~~~~~i~w~~~ 507 (908)
23675 . +...++.||.|+... .++...+.|.++
23676 T Consensus 525 ~~~~~~~~~~vg~~~~~~~~~~~l~~~~~~i~W~~g 560 (568)
23677 T 5FBK_B 525 PEDGSIVFKEVGYYNVYAKKGERLFINEEKILWSGF 560 (568)
23678 T ss_dssp TTTSSEEEEEEEEECTTSCTTSSEEECGGGCCCC--
23679 T ss_pred CCCCcEEEEEEEEEEeeccCCCeEEEeccceeccCC
23680 Confidence 1 112588999998652 122335778654
23681
23682
23683 No 33
23684 >1DP4_A ATRIAL NATRIURETIC PEPTIDE RECEPTOR A; periplasmic binding protein fold, dimer; HET: SO4, NAG; 2.0A {Rattus norvegicus} SCOP: c.93.1.1
23685 Probab=99.79 E-value=2.8e-24 Score=236.57 Aligned_cols=369 Identities=15% Similarity=0.224 Sum_probs=238.8 Template_Neff=11.700
23686
23687 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTC-----SRDTYALEQSLT 118 (908)
23688 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~-----~~~~~a~~~~~~ 118 (908)
23689 ++++||+++|.++... ...+.....|+++|++++|+++++++|+++++++.|+. +++..+.+.+
23690 T Consensus 1 ~~i~ig~~~p~~~~~~---------~~~~~~~~~~~~~A~~~in~~~~~~~~~~i~l~~~d~~~~~~~~~~~~~~~~~-- 69 (435)
23691 T 1DP4_A 1 SDLTVAVVLPLTNTSY---------PWSWARVGPAVELALARVKARPDLLPGWTVRMVLGSSENAAGVCSDTAAPLAA-- 69 (435)
23692 T ss_dssp CEEEEEEEECSSCCCS---------TTCHHHHHHHHHHHHHHHHTCTTSSTTCEEEEEEEECBCTTSSBCTTHHHHHH--
23693 T ss_pred CCeEEEEEcccCCCCC---------CcchhhhHHHHHHHHHHHHcCCCCCCCcEEEEEEcCCccccccccccchHHHH--
23694 Confidence 3689999999987431 01266788999999999999887777899999988875 4433322222
23695
23696
23697 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
23698 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
23699 .+++. .++++++||+.++..+..++.++...++|+|++.+.++.+.++..+++++++.|+
23700 T Consensus 70 --~~~~~------------------~~~v~~viG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~~~~~~~~p~ 129 (435)
23701 T 1DP4_A 70 --VDLKW------------------EHSPAVFLGPGCVYSAAPVGRFTAHWRVPLLTAGAPALGIGVKDEYALTTRTGPS 129 (435)
23702 T ss_dssp --HHHHH------------------HHCCSEEECCCSHHHHHHHHHHHHHHTCCEEESCCCCGGGGCTTTSTTEEECSCC
23703 T ss_pred --HHHHH------------------hcCCCEEECCCCcccchhHHHHHhhcCCCEEecCCchhccCccceeeeeeeeCCC
23704 Confidence 22222 1578899999888777888899999999999988877666544457899999999
23705
23706
23707 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGES-----GVEAFTQISRE-IGGVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
23708 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~-----~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
23709 ....+.++++++++++|+++++|+.++.++.. ..+.+.+.+++ . ++++.....+. .+..++...+++++.
23710 T Consensus 130 ~~~~~~a~~~~~~~~~~~~v~ii~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~~~~~~~~~~~~- 205 (435)
23711 T 1DP4_A 130 HVKLGDFVTALHRRLGWEHQALVLYADRLGDDRPCFFIVEGLYMRVRERL-NITVNHQEFVE--GDPDHYPKLLRAVRR- 205 (435)
23712 T ss_dssp HHHHHHHHHHHHHHHTCCSEEEEEEECCSSSCCHHHHHHHHHHHHHHHHH-CCEEEEEEECT--TCGGGHHHHHHHHHH-
23713 T ss_pred HHHHHHHHHHHHHHHCCeEEEEEEEcCCCCCCceehHHHHHHHHHHHHHc-CCeeceeeecC--CCcchHHHHHHHHHh-
23714 Confidence 99899999999988999999999876665533 45666666654 3 35554332222 122345566666652
23715
23716
23717 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAP----------V------YQQEEIAEGAVTILPKR 335 (908)
23718 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~----------~------~~~~~~~~g~~~~~~~~ 335 (908)
23719 ++++|++......+..+++++++.|+.. .+.|+..+.+...... . ........+.+.+....
23720 T Consensus 206 -~~~~iv~~~~~~~~~~~l~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (435)
23721 T 1DP4_A 206 -KGRVIYICSSPDAFRNLMLLALNAGLTGEDYVFFHLDVFGQSLKSAQGLVPQKPWERGDGQDRSARQAFQAAKIITYKE 284 (435)
23722 T ss_dssp -HCSEEEEESCHHHHHHHHHHHHHTTCCTTTCEEEEECTTCTTSCSSCTTSCBCTTCCSSSCHHHHHHHGGGEEEEEECC
23723 T ss_pred -cccEEEEeCCHHHHHHHHHHHHHCCCCCCCEEEEEEEcCCcccccccCCCCCCCCcCCCCCCHHHHHHHHhceecccCC
23724 Confidence 5788888877778889999999888853 4677765533221000 0 00000111111110000
23725
23726
23727 Q NP_000836.2 336 ASIDGFDRYFRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYA 415 (908)
23728 Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~A 415 (908)
23729 ...+....|.+.+++.+...+ .|... ...+..++..+|||+++++.|
23730 T Consensus 285 ---------------~~~~~~~~f~~~~~~~~~~~~-----------~~~~~-------~~~~~~~~~~~yda~~~~~~a 331 (435)
23731 T 1DP4_A 285 ---------------PDNPEYLEFLKQLKLLADKKF-----------NFTVE-------DGLKNIIPASFHDGLLLYVQA 331 (435)
23732 T ss_dssp ---------------CCSHHHHHHHHHHHHHHHHHH-----------CCCCC-------CSGGGHHHHHHHHHHHHHHHH
23733 T ss_pred ---------------CCCHHHHHHHHHHHHHhhcCC-----------CCCcc-------cccccccHHHHHHHHHHHHHH
23734 Confidence 000111112222222111000 01000 012345678899999999999
23735
23736
23737 Q NP_000836.2 416 LHNMHKDLCPGYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
23738 Q Consensus 416 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
23739 ++++....+. ..++..+.+.|++..|.|.+| .+.|+++|++...+.+.+++.. .+.++.||.|+..
23740 T Consensus 332 l~~~~~~~~~----------~~~~~~l~~~l~~~~f~g~~G-~~~f~~~g~~~~~~~i~~~~~~--~~~~~~vg~~~~~ 397 (435)
23741 T 1DP4_A 332 VTETLAQGGT----------VTDGENITQRMWNRSFQGVTG-YLKIDRNGDRDTDFSLWDMDPE--TGAFRVVLNYNGT 397 (435)
23742 T ss_dssp HHHHHHTTCC----------TTCHHHHHHTTTTEEEEETTE-EEEECTTSBBCCCEEEEEECTT--TCCEEEEEEECTT
23743 T ss_pred HHHHHHcCCC----------CCCHHHHHHHHhcceEeecCe-eEEECCCCCccccEEEEEEcCC--CCeEEEEEEEecC
23744 Confidence 9988643210 124456778888889999999 8999999998877888888742 2468899999865
23745
23746
23747 No 34
23748 >1DP4_C ATRIAL NATRIURETIC PEPTIDE RECEPTOR A; periplasmic binding protein fold, dimer; HET: NAG, SO4; 2.0A {Rattus norvegicus} SCOP: c.93.1.1
23749 Probab=99.79 E-value=2.8e-24 Score=236.57 Aligned_cols=369 Identities=15% Similarity=0.224 Sum_probs=238.8 Template_Neff=11.700
23750
23751 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTC-----SRDTYALEQSLT 118 (908)
23752 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~-----~~~~~a~~~~~~ 118 (908)
23753 ++++||+++|.++... ...+.....|+++|++++|+++++++|+++++++.|+. +++..+.+.+
23754 T Consensus 1 ~~i~ig~~~p~~~~~~---------~~~~~~~~~~~~~A~~~in~~~~~~~~~~i~l~~~d~~~~~~~~~~~~~~~~~-- 69 (435)
23755 T 1DP4_C 1 SDLTVAVVLPLTNTSY---------PWSWARVGPAVELALARVKARPDLLPGWTVRMVLGSSENAAGVCSDTAAPLAA-- 69 (435)
23756 T ss_dssp CEEEEEEEECSSCCCS---------TTCHHHHHHHHHHHHHHHHTCTTSSTTCEEEEEEEECBCTTSSBCTTHHHHHH--
23757 T ss_pred CCeEEEEEcccCCCCC---------CcchhhhHHHHHHHHHHHHcCCCCCCCcEEEEEEcCCccccccccccchHHHH--
23758 Confidence 3689999999987431 01266788999999999999887777899999988875 4433322222
23759
23760
23761 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
23762 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
23763 .+++. .++++++||+.++..+..++.++...++|+|++.+.++.+.++..+++++++.|+
23764 T Consensus 70 --~~~~~------------------~~~v~~viG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~~~~~~~~p~ 129 (435)
23765 T 1DP4_C 70 --VDLKW------------------EHSPAVFLGPGCVYSAAPVGRFTAHWRVPLLTAGAPALGIGVKDEYALTTRTGPS 129 (435)
23766 T ss_dssp --HHHHH------------------HHCCSEEECCCSHHHHHHHHHHHHHHTCCEEESCCCCGGGGCTTTSTTEEECSCC
23767 T ss_pred --HHHHH------------------hcCCCEEECCCCcccchhHHHHHhhcCCCEEecCCchhccCccceeeeeeeeCCC
23768 Confidence 22222 1578899999888777888899999999999988877666544457899999999
23769
23770
23771 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGES-----GVEAFTQISRE-IGGVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
23772 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~-----~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
23773 ....+.++++++++++|+++++|+.++.++.. ..+.+.+.+++ . ++++.....+. .+..++...+++++.
23774 T Consensus 130 ~~~~~~a~~~~~~~~~~~~v~ii~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~~~~~~~~~~~~- 205 (435)
23775 T 1DP4_C 130 HVKLGDFVTALHRRLGWEHQALVLYADRLGDDRPCFFIVEGLYMRVRERL-NITVNHQEFVE--GDPDHYPKLLRAVRR- 205 (435)
23776 T ss_dssp HHHHHHHHHHHHHHHTCCSEEEEEEECCSSSCCHHHHHHHHHHHHHHHHH-CCEEEEEEECT--TCGGGHHHHHHHHHH-
23777 T ss_pred HHHHHHHHHHHHHHHCCeEEEEEEEcCCCCCCceehHHHHHHHHHHHHHc-CCeeceeeecC--CCcchHHHHHHHHHh-
23778 Confidence 99899999999988999999999876665533 45666666654 3 35554332222 122345566666652
23779
23780
23781 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAP----------V------YQQEEIAEGAVTILPKR 335 (908)
23782 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~----------~------~~~~~~~~g~~~~~~~~ 335 (908)
23783 ++++|++......+..+++++++.|+.. .+.|+..+.+...... . ........+.+.+....
23784 T Consensus 206 -~~~~iv~~~~~~~~~~~l~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (435)
23785 T 1DP4_C 206 -KGRVIYICSSPDAFRNLMLLALNAGLTGEDYVFFHLDVFGQSLKSAQGLVPQKPWERGDGQDRSARQAFQAAKIITYKE 284 (435)
23786 T ss_dssp -HCSEEEEESCHHHHHHHHHHHHHTTCCTTTCEEEEECTTCTTSCSSCTTSCBCTTCCSSSCHHHHHHHGGGEEEEEECC
23787 T ss_pred -cccEEEEeCCHHHHHHHHHHHHHCCCCCCCEEEEEEEcCCcccccccCCCCCCCCcCCCCCCHHHHHHHHhceecccCC
23788 Confidence 5788888877778889999999888853 4677765533221000 0 00000111111110000
23789
23790
23791 Q NP_000836.2 336 ASIDGFDRYFRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYA 415 (908)
23792 Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~A 415 (908)
23793 ...+....|.+.+++.+...+ .|... ...+..++..+|||+++++.|
23794 T Consensus 285 ---------------~~~~~~~~f~~~~~~~~~~~~-----------~~~~~-------~~~~~~~~~~~yda~~~~~~a 331 (435)
23795 T 1DP4_C 285 ---------------PDNPEYLEFLKQLKLLADKKF-----------NFTVE-------DGLKNIIPASFHDGLLLYVQA 331 (435)
23796 T ss_dssp ---------------CCSHHHHHHHHHHHHHHHHHH-----------CCCCC-------CSGGGHHHHHHHHHHHHHHHH
23797 T ss_pred ---------------CCCHHHHHHHHHHHHHhhcCC-----------CCCcc-------cccccccHHHHHHHHHHHHHH
23798 Confidence 000111112222222111000 01000 012345678899999999999
23799
23800
23801 Q NP_000836.2 416 LHNMHKDLCPGYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
23802 Q Consensus 416 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
23803 ++++....+. ..++..+.+.|++..|.|.+| .+.|+++|++...+.+.+++.. .+.++.||.|+..
23804 T Consensus 332 l~~~~~~~~~----------~~~~~~l~~~l~~~~f~g~~G-~~~f~~~g~~~~~~~i~~~~~~--~~~~~~vg~~~~~ 397 (435)
23805 T 1DP4_C 332 VTETLAQGGT----------VTDGENITQRMWNRSFQGVTG-YLKIDRNGDRDTDFSLWDMDPE--TGAFRVVLNYNGT 397 (435)
23806 T ss_dssp HHHHHHTTCC----------TTCHHHHHHTTTTEEEEETTE-EEEECTTSBBCCCEEEEEECTT--TCCEEEEEEECTT
23807 T ss_pred HHHHHHcCCC----------CCCHHHHHHHHhcceEeecCe-eEEECCCCCccccEEEEEEcCC--CCeEEEEEEEecC
23808 Confidence 9988643210 124456778888889999999 8999999998877888888742 2468899999865
23809
23810
23811 No 35
23812 >5X2M_A Taste receptor, type 1, member; receptor, ligand binding, amino acid; HET: GLN, NAG; 2.206A {Oryzias latipes}
23813 Probab=99.78 E-value=4.3e-24 Score=237.04 Aligned_cols=419 Identities=24% Similarity=0.397 Sum_probs=256.0 Template_Neff=11.300
23814
23815 Q NP_000836.2 35 EYAHSIRVDGDIILGGLFPVHAKGE------RGVPCGE-LKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCS 107 (908)
23816 Q Consensus 35 ~~~~~~~~~~~i~Ig~l~p~~~~~~------~~~~c~~-~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~ 107 (908)
23817 ..+.....+++++||+++|+++... ....|+. .....+.....|+++|++++|+++++++|+++++.+.|++.
23818 T Consensus 4 ~~~~~~~~~~~i~ig~l~p~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~a~~~A~~~iN~~~~~~~~~~i~~~~~d~~~ 83 (461)
23819 T 5X2M_A 4 DQTSEFHLRGDYLIGGLFNIHYVAAANFQRPQAIDCSSKLFILPNYRRFQMMRFSVEEINNSSSLLPNVSLGYQMFDHCS 83 (461)
23820 T ss_dssp --CBTTEECCSEEEEEEECCEECCCCCCSSCBCCCGGGSEECHHHHHHHHHHHHHHHHHHTCSSSSTTCCEEEEEEECSC
23821 T ss_pred ccceeeEecCCEEEEeEEEeeecccccCCCCCCcccccceecchhHHHHHHHHHHHHHHHcCCCCCCCCcceEEEEcCCC
23822 Confidence 3455678889999999999997632 1234553 11235667889999999999998878788999999999876
23823
23824
23825 Q NP_000836.2 108 RDTYALEQ-SLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDN 186 (908)
23826 Q Consensus 108 ~~~~a~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~ 186 (908)
23827 +...+... .....++++.. ...+....++++++||+.++.....++.++...++|+|++.+..+.+.+.
23828 T Consensus 84 ~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~v~avig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~ 153 (461)
23829 T 5X2M_A 84 DIHSFPGIFKLLSVNDLIRP----------WEDASTGLPNAIGVVGPFTSTHALSIAPIFMTNLFPMVSYGCSGSVFSKE 153 (461)
23830 T ss_dssp STTCHHHHHHHHCSSSEECT----------TCC----CCSCSEEECCSSHHHHHHHHHHHHHTTCCEEESSCCCGGGGCT
23831 T ss_pred CcchHHHHHHHHhcCCcCCc----------ccccCCCCCCeeEEECCCCcHHHHHHHHHHhhcCCCeecceecCcccCCc
23832 Confidence 54321110 01111222110 00000001478899999888777788888999999999988766555443
23833
23834
23835 Q NP_000836.2 187 TRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKII 266 (908)
23836 Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~ 266 (908)
23837 ..+++++++.++....+.++++++++++|+++++++.++.++....+.+++.+++. ++++.....++ . ..++...+
23838 T Consensus 154 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~-~~~~~~~~ 229 (461)
23839 T 5X2M_A 154 NLYPSFLRTVHSNKDVINAIVGIILNFNWRWVAFLYSDDDFGKDGLEQFKNKIEDS-EICLAFYKAIN--V-NTDYLQVF 229 (461)
23840 T ss_dssp TTSTTEEESSCCHHHHHHHHHHHHHHSSBCEEEEEEESSHHHHHHHHHHHHHHTTS-SCEEEEEEEEC--T-TCCHHHHH
23841 T ss_pred ccCCceeeecCCCHHHHHHHHHHHHHcCCcEEEEEEeCChhhHHHHHHHHHHHHhc-CcEEEEEEeeC--C-CccHHHHH
23842 Confidence 35788999999999999999999988999999999987778888888888887775 46665433332 1 23466677
23843
23844
23845 Q NP_000836.2 267 KRLLETPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVY-QQEEIAEGAVTILPKRASIDGFDRYF 345 (908)
23846 Q Consensus 267 ~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (908)
23847 ++++. .++++|++......+..+++++++.|+. .+.|+..+.|........ .......+.+.+.......+.+..++
23848 T Consensus 230 ~~i~~-~~~~~iv~~~~~~~~~~~l~~~~~~g~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (461)
23849 T 5X2M_A 230 KQIEE-QNIKVIVVFAPKVYAEAVVESAVQLNVT-NKVWIADDGWSLNKKLPSMNGIQNIGTVLGVAQPVVTIPGFTDFI 307 (461)
23850 T ss_dssp HHHHH-TTCCEEEEECCHHHHHHHHHHHHHTTCC-SEEEEECTTTTTCSSGGGSTTGGGGEEEEEEECCCCCCTTHHHHH
23851 T ss_pred HHHHh-CCCeEEEEECChHHHHHHHHHHHHcCCC-CcEEEEechhhcCCccccCCccceeccEEEEeccceeCCCHHHHH
23852 Confidence 77763 5789988887777788999999988875 356666554432211000 00011122222211111111122111
23853
23854
23855 Q NP_000836.2 346 RSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP 425 (908)
23856 Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~ 425 (908)
23857 ............+..++++..+.|. .... .. .......++..+|||++++++|++++..+..
23858 T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~-~~-~~~~~~~~~~~~yDav~~~a~a~~~~~~~~~- 369 (461)
23859 T 5X2M_A 308 YSAISQTDGGDTEQKMFCNQKCNCS---------------NLSV-KS-LLNADPSFSFPVYAAVYAIAHALHNTLRCGS- 369 (461)
23860 T ss_dssp HHHHTC---------CCTTCCCCCT---------------TCCH-HH-HHTSCCTTHHHHHHHHHHHHHHHHHHHTCCS-
23861 T ss_pred HhcccccCCCChhHHHHhcccCCCC---------------cccc-hh-hccCCCccHHHHHHHHHHHHHHHHHHhhcCC-
23862 Confidence 1000000000111111111111110 0000 00 0011234678899999999999998864321
23863
23864
23865 Q NP_000836.2 426 GYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
23866 Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
23867 ..|......++..+.+.|++..|.|.+| .+.|+++|++. ..+.+++++. ++.++.||.|+..
23868 T Consensus 370 ---~~~~~~~~~~~~~l~~~l~~~~f~g~~G-~i~f~~~g~~~~~~~~i~~~~~---~~~~~~vg~~~~~ 432 (461)
23869 T 5X2M_A 370 ---DRCPKNITVHPHMILEELKKSNFTLLNQ-TVQFDENGDPKFGSLSVVFWNS---SGNAEEVGSYHFQ 432 (461)
23870 T ss_dssp ---SCCCCSCCCCHHHHHHHHHTCCEEETTE-EECBCTTSCBSCCCEEEEEECT---TSCEEEEEEECSS
23871 T ss_pred ---CCCCccCCCCHHHHHHHHhcCcEEeCCc-eEEECCCCCCCCccEEEEEEeC---CCCEEEEEEEEcC
23872 Confidence 1121111234556778888889999988 89999999886 6788888873 2478899999865
23873
23874
23875 No 36
23876 >5X2N_C Taste receptor, type 1, member; receptor, ligand binding, amino acid; HET: ALA, NAG; 2.2A {Oryzias latipes}
23877 Probab=99.78 E-value=4.3e-24 Score=237.04 Aligned_cols=419 Identities=24% Similarity=0.397 Sum_probs=256.5 Template_Neff=11.300
23878
23879 Q NP_000836.2 35 EYAHSIRVDGDIILGGLFPVHAKGE------RGVPCGE-LKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCS 107 (908)
23880 Q Consensus 35 ~~~~~~~~~~~i~Ig~l~p~~~~~~------~~~~c~~-~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~ 107 (908)
23881 ..+.....+++++||+++|+++... ....|+. .....+.....|+++|++++|+++++++|+++++.+.|++.
23882 T Consensus 4 ~~~~~~~~~~~i~ig~l~p~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~a~~~A~~~iN~~~~~~~~~~i~~~~~d~~~ 83 (461)
23883 T 5X2N_C 4 DQTSEFHLRGDYLIGGLFNIHYVAAANFQRPQAIDCSSKLFILPNYRRFQMMRFSVEEINNSSSLLPNVSLGYQMFDHCS 83 (461)
23884 T ss_dssp --CCTTEECCSEEEEEEECCEECCCCCCSSSBCCCGGGSEECHHHHHHHHHHHHHHHHHHHCSSSSTTCCEEEEEEECSC
23885 T ss_pred ccceeeEecCCEEEEeEEEeeecccccCCCCCCcccccceecchhHHHHHHHHHHHHHHHcCCCCCCCCcceEEEEcCCC
23886 Confidence 3455678889999999999997632 1234553 11235667889999999999998878788999999999876
23887
23888
23889 Q NP_000836.2 108 RDTYALEQ-SLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDN 186 (908)
23890 Q Consensus 108 ~~~~a~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~ 186 (908)
23891 +...+... .....++++.. ...+....++++++||+.++.....++.++...++|+|++.+..+.+.+.
23892 T Consensus 84 ~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~v~avig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~ 153 (461)
23893 T 5X2N_C 84 DIHSFPGIFKLLSVNDLIRP----------WEDASTGLPNAIGVVGPFTSTHALSIAPIFMTNLFPMVSYGCSGSVFSKE 153 (461)
23894 T ss_dssp GGGCHHHHHHHHCBTTEECT----------TCC-CCCCCSCSEEECCSSHHHHHHHHHHHHHTTCCEEESSCCCGGGGCT
23895 T ss_pred CcchHHHHHHHHhcCCcCCc----------ccccCCCCCCeeEEECCCCcHHHHHHHHHHhhcCCCeecceecCcccCCc
23896 Confidence 54321110 01111222110 00000001478899999888777788888999999999988766555443
23897
23898
23899 Q NP_000836.2 187 TRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKII 266 (908)
23900 Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~ 266 (908)
23901 ..+++++++.++....+.++++++++++|+++++++.++.++....+.+++.+++. ++++.....++ . ..++...+
23902 T Consensus 154 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~-~~~~~~~~ 229 (461)
23903 T 5X2N_C 154 NLYPSFLRTVHSNKDVINAIVGIILNFNWRWVAFLYSDDDFGKDGLEQFKNKIEDS-EICLAFYKAIN--V-NTDYLQVF 229 (461)
23904 T ss_dssp TTCTTEEESSCCHHHHHHHHHHHHHTSSBCEEEEEEESSHHHHHHHHHHHHHHTTS-SCEEEEEEEEC--T-TCCHHHHH
23905 T ss_pred ccCCceeeecCCCHHHHHHHHHHHHHcCCcEEEEEEeCChhhHHHHHHHHHHHHhc-CcEEEEEEeeC--C-CccHHHHH
23906 Confidence 35788999999999999999999988999999999987778888888888887775 46665433332 1 23466677
23907
23908
23909 Q NP_000836.2 267 KRLLETPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVY-QQEEIAEGAVTILPKRASIDGFDRYF 345 (908)
23910 Q Consensus 267 ~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (908)
23911 ++++. .++++|++......+..+++++++.|+. .+.|+..+.|........ .......+.+.+.......+.+..++
23912 T Consensus 230 ~~i~~-~~~~~iv~~~~~~~~~~~l~~~~~~g~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (461)
23913 T 5X2N_C 230 KQIEE-QNIKVIVVFAPKVYAEAVVESAVQLNVT-NKVWIADDGWSLNKKLPSMNGIQNIGTVLGVAQPVVTIPGFTDFI 307 (461)
23914 T ss_dssp HHHHH-TTCCEEEEECCHHHHHHHHHHHHHTTCC-SEEEEECTTTTTCSSGGGSTTGGGGEEEEEEECCCCCCTTHHHHH
23915 T ss_pred HHHHh-CCCeEEEEECChHHHHHHHHHHHHcCCC-CcEEEEechhhcCCccccCCccceeccEEEEeccceeCCCHHHHH
23916 Confidence 77763 5789988887777788999999988875 356666554432211000 00011122222211111111122111
23917
23918
23919 Q NP_000836.2 346 RSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP 425 (908)
23920 Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~ 425 (908)
23921 ............+..++++..+.|. .... .. .......++..+|||++++++|++++..+..
23922 T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~-~~-~~~~~~~~~~~~yDav~~~a~a~~~~~~~~~- 369 (461)
23923 T 5X2N_C 308 YSAISQTDGGDTEQKMFCNQKCNCS---------------NLSV-KS-LLNADPSFSFPVYAAVYAIAHALHNTLRCGS- 369 (461)
23924 T ss_dssp HHHHCC-------CCCCTTCCCCCC---------------SCCH-HH-HHTSCCTTHHHHHHHHHHHHHHHHHHTTCCS-
23925 T ss_pred HhcccccCCCChhHHHHhcccCCCC---------------cccc-hh-hccCCCccHHHHHHHHHHHHHHHHHHhhcCC-
23926 Confidence 1000000000111111111111110 0000 00 0011234678899999999999998864321
23927
23928
23929 Q NP_000836.2 426 GYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
23930 Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
23931 ..|......++..+.+.|++..|.|.+| .+.|+++|++. ..+.+++++. ++.++.||.|+..
23932 T Consensus 370 ---~~~~~~~~~~~~~l~~~l~~~~f~g~~G-~i~f~~~g~~~~~~~~i~~~~~---~~~~~~vg~~~~~ 432 (461)
23933 T 5X2N_C 370 ---DRCPKNITVHPHMILEELKKSNFTLLNQ-TVQFDENGDPKFGSLSVVFWNS---SGNAEEVGSYHFQ 432 (461)
23934 T ss_dssp ---SCCCSSCCCCHHHHHHHHHTCCEEETTE-EECBCTTSCBSCCCEEEEEECT---TSCEEEEEEECSS
23935 T ss_pred ---CCCCccCCCCHHHHHHHHhcCcEEeCCc-eEEECCCCCCCCccEEEEEEeC---CCCEEEEEEEEcC
23936 Confidence 1121111234556778888889999988 89999999886 6788888873 2478899999865
23937
23938
23939 No 37
23940 >5X2M_B Taste receptor, type 1, member; receptor, ligand binding, amino acid; HET: GLN, NAG; 2.206A {Oryzias latipes}
23941 Probab=99.76 E-value=1.5e-23 Score=233.83 Aligned_cols=440 Identities=23% Similarity=0.419 Sum_probs=263.9 Template_Neff=11.200
23942
23943 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGE---------RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRD 109 (908)
23944 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~---------~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~ 109 (908)
23945 .....++++||+++|.++... ....|+... ..+.....|+++|++++|+++++++|+++++++.|+++++
23946 T Consensus 12 ~~~~~~~i~ig~l~p~~~~~~~~~~~~~~~~~~~c~~~~-~~~~~~~~a~~~a~~~~n~~~~~~~g~~i~~~~~d~~~~~ 90 (478)
23947 T 5X2M_B 12 LFSMPGDIKLGGLFPIKEQSNEVSNDLTKLNSVSCDSLN-KDGLGRALVMKYAVEEINANSQLLPGVKLGYKIYNTCRHS 90 (478)
23948 T ss_dssp SSEECCSEEEEEEECCEECC------------CCCCEEC-HHHHHHHHHHHHHHHHHHHCTTTSTTCCEEEEEEECTTCH
23949 T ss_pred ccccCCCEEEEEEEeccccCCcccccccccCCCcccccc-chhHHHHHHHHHHHHHHHcCCCCCCCCeeeEEEEccCCCH
23950 Confidence 356678999999999987532 123465432 3467788999999999999888877899999999988775
23951
23952
23953 Q NP_000836.2 110 TYALEQSLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRY 189 (908)
23954 Q Consensus 110 ~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~ 189 (908)
23955 ..+.+.+.+++.+.... .... .+.....+++++++||+.++.....++.++...++|+|++....+.+.+...+
23956 T Consensus 91 ~~~~~~~~~l~~~~~~~-~~~~-----~~~~~~~~~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~ 164 (478)
23957 T 5X2M_B 91 AVIVRPALSFLTEKSNG-TLSV-----ECNYTDYETDMVAVIGPQSSEMVTVIGKLLGFFLMPQISFGATSDKFSDSLVY 164 (478)
23958 T ss_dssp HHHHHHHHHTTSBTTTS-SEEC-----CSBCTTCCBSCSEEECCSSHHHHHHHHHHHHHTTCCEEESSCCCGGGGCTTTS
23959 T ss_pred HHHHHHHHHHHhhccCC-cccc-----ccCCCCCCCCeEEEEcCCCHHHHHHHHHHHHhhCCcEeecCCCCcccCCCccc
23960 Confidence 54433333333210000 0000 00000001578899998888777778888899999999988766655443357
23961
23962
23963 Q NP_000836.2 190 DFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPRE-PRPGEFEKIIKR 268 (908)
23964 Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~-~~~~~~~~~~~~ 268 (908)
23965 ++++++.++....+.++++++++++|++|++|+.++.++....+.+++.+++. ++++.....+... ....++...+++
23966 T Consensus 165 ~~~~~~~~~~~~~~~al~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~ 243 (478)
23967 T 5X2M_B 165 PSFFRTVPSDIRQVDAMVQLIKKFNWNWVAVVGSEEEYGQQGVQQFSKKAEDM-GVCVAYQGLIPIYDDPKPAIQTIINN 243 (478)
23968 T ss_dssp TTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEECSSSCCHHHHHHHHHH
23969 T ss_pred cceeecCCCcHHHHHHHHHHHHHcCCeEEEEEecCCHHHHHHHHHHHHHHHHc-CcEEEEEeeecCCCCChHHHHHHHHH
23970 Confidence 89999999998899999999988999999999987778888888888888765 4555433222210 112345566677
23971
23972
23973 Q NP_000836.2 269 LLETPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQ-QEEIAEGAVTILPKRASIDGFDRYFRS 347 (908)
23974 Q Consensus 269 l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (908)
23975 ++. .++|+|++......+..+++++++.|+. ..|++.+.|......... ......+.+.+.........+
23976 T Consensus 244 l~~-~~~~~ivl~~~~~~~~~~l~~~~~~g~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 314 (478)
23977 T 5X2M_B 244 IQT-TEVKVVVVFSLVSPAVSFFEEVIKKNLT--GVWIASSSWAISDKVYSLPNIDSIGTVIGFIDETETLELL------ 314 (478)
23978 T ss_dssp HHH-HTCSEEEEECCHHHHHHHHHHHHHTTCC--EEEEECTTTTTCHHHHTSTTGGGSEEEEEEEECCCCCTTH------
23979 T ss_pred Hhc-CCCeEEEEEccChhHHHHHHHHHHcCCc--eeEEEecchhcccchhcCCCcccccceEEEEecccccccc------
23980 Confidence 763 5788888877677788889999888874 356666544332110000 011112222211110000000
23981
23982
23983 Q NP_000836.2 348 RTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARD-----SSYEQEGKVQFVIDAVYSMAYALHNMHKD 422 (908)
23984 Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~-----~~~~~~~~~~~~yDAv~~la~Al~~~~~~ 422 (908)
23985 .+....|.+.+.+.+...... .....|......... .......++..+|||++++++|+++....
23986 T Consensus 315 -----~~~~~~f~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ydav~~~a~al~~~~~~ 384 (478)
23987 T 5X2M_B 315 -----SPFTEVLFKKIHEASPTEKPE-----DPYNPCPECWSLSPANVSLVKEESVQRTAFSVYAAVYTVAHALHKLLEC 384 (478)
23988 T ss_dssp -----HHHHHHHHHHHHHTTTC-----------CCSCGGGGGCCGGGGHHHHSHHHHTTHHHHHHHHHHHHHHHHHHTTC
23989 T ss_pred -----cHHHHHHHHHHHHcCCCCCCC-----CCCCCCCCccccCCCCcccccccccchHHHHHHHHHHHHHHHHHHHhcC
23990 Confidence 000111111111111100000 000011110000000 00123456778999999999999988753
23991
23992
23993 Q NP_000836.2 423 LCPGYIGLCPRM--STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQL-HLKV 499 (908)
23994 Q Consensus 423 ~~~~~~~~~~~~--~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~-~~~~ 499 (908)
23995 .+. .|... ...+++.+.+.|++.+|.|.+| .+.||++|++...+.+++++.. ++.++.||.|+... .++.
23996 T Consensus 385 ~~~----~c~~~~~~~~~~~~l~~~l~~~~~~g~~G-~v~fd~~g~~~~~~~i~~~~~~--~~~~~~vg~~~~~~l~~~~ 457 (478)
23997 T 5X2M_B 385 NSA----ACKWSSSTRLYPWKLLEVLKEFSVNISNT-SLKFDQNGNPNIGYSVIQRIWE--NQSLSSVGSYRSANLSINE 457 (478)
23998 T ss_dssp CSS----CCSCCTTCCCCHHHHHHHHTTCEEEETTE-EEEBCTTSCBSCCEEEEEEETT--TTEEEEEEEEETTEEEECG
23999 T ss_pred CCC----cCCcccccCCCHHHHHHHHHhCeEecCCC-eEEECCCCCCCCceEEEEEEeC--CCeeEEEEEEecccceEec
24000 Confidence 321 12110 1134556778888888999888 8999999998888888887642 25789999998652 3333
24001
24002
24003 Q NP_000836.2 500 EDMQWAHREHTHP 512 (908)
24004 Q Consensus 500 ~~i~w~~~~~~~p 512 (908)
24005 ..+.|.++...+|
24006 T Consensus 458 ~~~~w~~~~~~~p 470 (478)
24007 T 5X2M_B 458 TLFKWYTNNSEKP 470 (478)
24008 T ss_dssp GGCCCCSTTSSCC
24009 T ss_pred cceeeecCCCCCC
24010 Confidence 4577875433344
24011
24012
24013 No 38
24014 >5X2N_B Taste receptor, type 1, member; receptor, ligand binding, amino acid; HET: ALA, NAG; 2.2A {Oryzias latipes}
24015 Probab=99.76 E-value=1.5e-23 Score=233.83 Aligned_cols=440 Identities=23% Similarity=0.419 Sum_probs=264.3 Template_Neff=11.200
24016
24017 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGE---------RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRD 109 (908)
24018 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~---------~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~ 109 (908)
24019 .....++++||+++|.++... ....|+... ..+.....|+++|++++|+++++++|+++++++.|+++++
24020 T Consensus 12 ~~~~~~~i~ig~l~p~~~~~~~~~~~~~~~~~~~c~~~~-~~~~~~~~a~~~a~~~~n~~~~~~~g~~i~~~~~d~~~~~ 90 (478)
24021 T 5X2N_B 12 LFSMPGDIKLGGLFPIKEQSNEVSNDLTKLNSVSCDSLN-KDGLGRALVMKYAVEEINANSQLLPGVKLGYKIYNTCRHS 90 (478)
24022 T ss_dssp SSEECCSEEEEEEECCEECCC-----------CCCCEEC-HHHHHHHHHHHHHHHHHHHCTTTSTTCCEEEEEEECTTCH
24023 T ss_pred ccccCCCEEEEEEEeccccCCcccccccccCCCcccccc-chhHHHHHHHHHHHHHHHcCCCCCCCCeeeEEEEccCCCH
24024 Confidence 356678999999999987532 123465432 3467788999999999999888877899999999988775
24025
24026
24027 Q NP_000836.2 110 TYALEQSLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRY 189 (908)
24028 Q Consensus 110 ~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~ 189 (908)
24029 ..+.+.+.+++.+.... .... .+.....+++++++||+.++.....++.++...++|+|++....+.+.+...+
24030 T Consensus 91 ~~~~~~~~~l~~~~~~~-~~~~-----~~~~~~~~~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~ 164 (478)
24031 T 5X2N_B 91 AVIVRPALSFLTEKSNG-TLSV-----ECNYTDYETDMVAVIGPQSSEMVTVIGKLLGFFLMPQISFGATSDKFSDSLVY 164 (478)
24032 T ss_dssp HHHHHHHHHTTSBTTTS-SEEC-----CSBCTTCCBSCSEEECCSSHHHHHHHHHHHHHTTCCEEESSCCCGGGGCTTTS
24033 T ss_pred HHHHHHHHHHHhhccCC-cccc-----ccCCCCCCCCeEEEEcCCCHHHHHHHHHHHHhhCCcEeecCCCCcccCCCccc
24034 Confidence 54433333333210000 0000 00000001578899998888777778888899999999988766655443357
24035
24036
24037 Q NP_000836.2 190 DFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPRE-PRPGEFEKIIKR 268 (908)
24038 Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~-~~~~~~~~~~~~ 268 (908)
24039 ++++++.++....+.++++++++++|++|++|+.++.++....+.+++.+++. ++++.....+... ....++...+++
24040 T Consensus 165 ~~~~~~~~~~~~~~~al~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~ 243 (478)
24041 T 5X2N_B 165 PSFFRTVPSDIRQVDAMVQLIKKFNWNWVAVVGSEEEYGQQGVQQFSKKAEDM-GVCVAYQGLIPIYDDPKPAIQTIINN 243 (478)
24042 T ss_dssp TTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEECSSSCCHHHHHHHHHH
24043 T ss_pred cceeecCCCcHHHHHHHHHHHHHcCCeEEEEEecCCHHHHHHHHHHHHHHHHc-CcEEEEEeeecCCCCChHHHHHHHHH
24044 Confidence 89999999998899999999988999999999987778888888888888765 4555433222210 112345566677
24045
24046
24047 Q NP_000836.2 269 LLETPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQ-QEEIAEGAVTILPKRASIDGFDRYFRS 347 (908)
24048 Q Consensus 269 l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (908)
24049 ++. .++|+|++......+..+++++++.|+. ..|++.+.|......... ......+.+.+.........+
24050 T Consensus 244 l~~-~~~~~ivl~~~~~~~~~~l~~~~~~g~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 314 (478)
24051 T 5X2N_B 244 IQT-TEVKVVVVFSLVSPAVSFFEEVIKKNLT--GVWIASSSWAISDKVYSLPNIDSIGTVIGFIDETETLELL------ 314 (478)
24052 T ss_dssp HHH-HTCSEEEEECCHHHHHHHHHHHHHTTCC--EEEEECTTTTTCHHHHTSTTGGGSEEEEEEEECCCCCTTH------
24053 T ss_pred Hhc-CCCeEEEEEccChhHHHHHHHHHHcCCc--eeEEEecchhcccchhcCCCcccccceEEEEecccccccc------
24054 Confidence 763 5788888877677788889999888874 356666544332110000 011112222211110000000
24055
24056
24057 Q NP_000836.2 348 RTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARD-----SSYEQEGKVQFVIDAVYSMAYALHNMHKD 422 (908)
24058 Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~-----~~~~~~~~~~~~yDAv~~la~Al~~~~~~ 422 (908)
24059 .+....|.+.+.+.+...... .....|......... .......++..+|||++++++|+++....
24060 T Consensus 315 -----~~~~~~f~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ydav~~~a~al~~~~~~ 384 (478)
24061 T 5X2N_B 315 -----SPFTEVLFKKIHEASPTEKPE-----DPYNPCPECWSLSPANVSLVKEESVQRTAFSVYAAVYTVAHALHKLLEC 384 (478)
24062 T ss_dssp -----HHHHHHHHHHHHHHTTSCCC------CTTCSCGGGGGCCGGGTHHHHSHHHHTTHHHHHHHHHHHHHHHHHHTTC
24063 T ss_pred -----cHHHHHHHHHHHHcCCCCCCC-----CCCCCCCCccccCCCCcccccccccchHHHHHHHHHHHHHHHHHHHhcC
24064 Confidence 000111111111111100000 000011110000000 00123456778999999999999988753
24065
24066
24067 Q NP_000836.2 423 LCPGYIGLCPRM--STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQL-HLKV 499 (908)
24068 Q Consensus 423 ~~~~~~~~~~~~--~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~-~~~~ 499 (908)
24069 .+. .|... ...+++.+.+.|++.+|.|.+| .+.||++|++...+.+++++.. ++.++.||.|+... .++.
24070 T Consensus 385 ~~~----~c~~~~~~~~~~~~l~~~l~~~~~~g~~G-~v~fd~~g~~~~~~~i~~~~~~--~~~~~~vg~~~~~~l~~~~ 457 (478)
24071 T 5X2N_B 385 NSA----ACKWSSSTRLYPWKLLEVLKEFSVNISNT-SLKFDQNGNPNIGYSVIQRIWE--NQSLSSVGSYRSANLSINE 457 (478)
24072 T ss_dssp CSS----CCSCCTTCCCCHHHHHHHHTTCEEEETTE-EEEBCTTSCBSCCEEEEEEETT--TTEEEEEEEEETTEEEECG
24073 T ss_pred CCC----cCCcccccCCCHHHHHHHHHhCeEecCCC-eEEECCCCCCCCceEEEEEEeC--CCeeEEEEEEecccceEec
24074 Confidence 321 12110 1134556778888888999888 8999999998888888887642 25789999998652 3333
24075
24076
24077 Q NP_000836.2 500 EDMQWAHREHTHP 512 (908)
24078 Q Consensus 500 ~~i~w~~~~~~~p 512 (908)
24079 ..+.|.++...+|
24080 T Consensus 458 ~~~~w~~~~~~~p 470 (478)
24081 T 5X2N_B 458 TLFKWYTNNSEKP 470 (478)
24082 T ss_dssp GGCCCCSTTSCCC
24083 T ss_pred cceeeecCCCCCC
24084 Confidence 4577875433344
24085
24086
24087 No 39
24088 >5X2N_D Taste receptor, type 1, member; receptor, ligand binding, amino acid; HET: NAG, ALA; 2.2A {Oryzias latipes}
24089 Probab=99.76 E-value=1.5e-23 Score=233.83 Aligned_cols=440 Identities=23% Similarity=0.419 Sum_probs=260.0 Template_Neff=11.200
24090
24091 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGE---------RGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRD 109 (908)
24092 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~---------~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~ 109 (908)
24093 .....++++||+++|.++... ....|+... ..+.....|+++|++++|+++++++|+++++++.|+++++
24094 T Consensus 12 ~~~~~~~i~ig~l~p~~~~~~~~~~~~~~~~~~~c~~~~-~~~~~~~~a~~~a~~~~n~~~~~~~g~~i~~~~~d~~~~~ 90 (478)
24095 T 5X2N_D 12 LFSMPGDIKLGGLFPIKEQSNEVSNDLTKLNSVSCDSLN-KDGLGRALVMKYAVEEINANSQLLPGVKLGYKIYNTCRHS 90 (478)
24096 T ss_dssp SSEECCSEEEEEEECCEECCC---------CCCCCCEEC-HHHHHHHHHHHHHHHHHHHCTTSSTTCCEEEEEEECTTCH
24097 T ss_pred ccccCCCEEEEEEEeccccCCcccccccccCCCcccccc-chhHHHHHHHHHHHHHHHcCCCCCCCCeeeEEEEccCCCH
24098 Confidence 356678999999999987532 123465432 3467788999999999999888877899999999988775
24099
24100
24101 Q NP_000836.2 110 TYALEQSLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRY 189 (908)
24102 Q Consensus 110 ~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~ 189 (908)
24103 ..+.+.+.+++.+.... .... .+.....+++++++||+.++.....++.++...++|+|++....+.+.+...+
24104 T Consensus 91 ~~~~~~~~~l~~~~~~~-~~~~-----~~~~~~~~~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~ 164 (478)
24105 T 5X2N_D 91 AVIVRPALSFLTEKSNG-TLSV-----ECNYTDYETDMVAVIGPQSSEMVTVIGKLLGFFLMPQISFGATSDKFSDSLVY 164 (478)
24106 T ss_dssp HHHHHHHHHTTSBTTTS-SEEC-----CSBCTTCCBSCSEEECCSCHHHHHHHHHHHHHTTCCEEESSCCCGGGGCTTTS
24107 T ss_pred HHHHHHHHHHHhhccCC-cccc-----ccCCCCCCCCeEEEEcCCCHHHHHHHHHHHHhhCCcEeecCCCCcccCCCccc
24108 Confidence 54433333333210000 0000 00000001578899998888777778888899999999988766655443357
24109
24110
24111 Q NP_000836.2 190 DFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPRE-PRPGEFEKIIKR 268 (908)
24112 Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~-~~~~~~~~~~~~ 268 (908)
24113 ++++++.++....+.++++++++++|++|++|+.++.++....+.+++.+++. ++++.....+... ....++...+++
24114 T Consensus 165 ~~~~~~~~~~~~~~~al~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~ 243 (478)
24115 T 5X2N_D 165 PSFFRTVPSDIRQVDAMVQLIKKFNWNWVAVVGSEEEYGQQGVQQFSKKAEDM-GVCVAYQGLIPIYDDPKPAIQTIINN 243 (478)
24116 T ss_dssp TTEEESSCCHHHHHHHHHHHHTTTTCCCEEEEEESSHHHHHHHHHHHHHHTTT-TCCEEEEEEECSSSCCHHHHHHHHHH
24117 T ss_pred cceeecCCCcHHHHHHHHHHHHHcCCeEEEEEecCCHHHHHHHHHHHHHHHHc-CcEEEEEeeecCCCCChHHHHHHHHH
24118 Confidence 89999999998899999999988999999999987778888888888888765 4555433222210 112345566677
24119
24120
24121 Q NP_000836.2 269 LLETPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQ-QEEIAEGAVTILPKRASIDGFDRYFRS 347 (908)
24122 Q Consensus 269 l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (908)
24123 ++. .++|+|++......+..+++++++.|+. ..|++.+.|......... ......+.+.+.........+
24124 T Consensus 244 l~~-~~~~~ivl~~~~~~~~~~l~~~~~~g~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 314 (478)
24125 T 5X2N_D 244 IQT-TEVKVVVVFSLVSPAVSFFEEVIKKNLT--GVWIASSSWAISDKVYSLPNIDSIGTVIGFIDETETLELL------ 314 (478)
24126 T ss_dssp HHC-----CEEEECCHHHHHHHHHHHHHTTCC--EEEEECHHHHTCHHHHTSTTGGGGEEEEEEEECCCCCTTH------
24127 T ss_pred Hhc-CCCeEEEEEccChhHHHHHHHHHHcCCc--eeEEEecchhcccchhcCCCcccccceEEEEecccccccc------
24128 Confidence 763 5788888877677788889999888874 356666544332110000 011112222211110000000
24129
24130
24131 Q NP_000836.2 348 RTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARD-----SSYEQEGKVQFVIDAVYSMAYALHNMHKD 422 (908)
24132 Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~-----~~~~~~~~~~~~yDAv~~la~Al~~~~~~ 422 (908)
24133 .+....|.+.+.+.+...... .....|......... .......++..+|||++++++|+++....
24134 T Consensus 315 -----~~~~~~f~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ydav~~~a~al~~~~~~ 384 (478)
24135 T 5X2N_D 315 -----SPFTEVLFKKIHEASPTEKPE-----DPYNPCPECWSLSPANVSLVKEESVQRTAFSVYAAVYTVAHALHKLLEC 384 (478)
24136 T ss_dssp -----HHHHHHHHHHHHTC------------CTTCSCGGGGGCCGGGTHHHHSHHHHTTHHHHHHHHHHHHHHHHHHTTC
24137 T ss_pred -----cHHHHHHHHHHHHcCCCCCCC-----CCCCCCCCccccCCCCcccccccccchHHHHHHHHHHHHHHHHHHHhcC
24138 Confidence 000111111111111100000 000011110000000 00123456778999999999999988753
24139
24140
24141 Q NP_000836.2 423 LCPGYIGLCPRM--STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQL-HLKV 499 (908)
24142 Q Consensus 423 ~~~~~~~~~~~~--~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~-~~~~ 499 (908)
24143 .+. .|... ...+++.+.+.|++.+|.|.+| .+.||++|++...+.+++++.. ++.++.||.|+... .++.
24144 T Consensus 385 ~~~----~c~~~~~~~~~~~~l~~~l~~~~~~g~~G-~v~fd~~g~~~~~~~i~~~~~~--~~~~~~vg~~~~~~l~~~~ 457 (478)
24145 T 5X2N_D 385 NSA----ACKWSSSTRLYPWKLLEVLKEFSVNISNT-SLKFDQNGNPNIGYSVIQRIWE--NQSLSSVGSYRSANLSINE 457 (478)
24146 T ss_dssp CSS----CCSCCTTCCCCHHHHHHHHTTCEEEETTE-EEEBCTTSCBSCCEEEEEEETT--TTEEEEEEEEETTEEEECG
24147 T ss_pred CCC----cCCcccccCCCHHHHHHHHHhCeEecCCC-eEEECCCCCCCCceEEEEEEeC--CCeeEEEEEEecccceEec
24148 Confidence 321 12110 1134556778888888999888 8999999998888888887642 25789999998652 3333
24149
24150
24151 Q NP_000836.2 500 EDMQWAHREHTHP 512 (908)
24152 Q Consensus 500 ~~i~w~~~~~~~p 512 (908)
24153 ..+.|.++...+|
24154 T Consensus 458 ~~~~w~~~~~~~p 470 (478)
24155 T 5X2N_D 458 TLFKWYTNNSEKP 470 (478)
24156 T ss_dssp GGCCCTTSCC---
24157 T ss_pred cceeeecCCCCCC
24158 Confidence 4577875433344
24159
24160
24161 No 40
24162 >1JDN_A ATRIAL NATRIURETIC PEPTIDE CLEARANCE RECEPTOR; Natriuretic peptide receptor, dimer, allosteric; HET: NDG, BMA, FUC, MAN, NAG; 2.9A {Homo sapiens} SCOP: c.93.1.1
24163 Probab=99.76 E-value=2e-23 Score=230.14 Aligned_cols=372 Identities=17% Similarity=0.238 Sum_probs=238.1 Template_Neff=11.600
24164
24165 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPD----LLSNITLGVRILDTCSRDTYALEQS 116 (908)
24166 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~----il~g~~l~~~~~d~~~~~~~a~~~~ 116 (908)
24167 ...++++||+++|.++... ..+.....|++.|++++|++++ +++|.++++.+.|+++++.. +
24168 T Consensus 5 ~~~~~i~Igv~~p~~~~~~----------~~~~~~~~~~~~a~~~~n~~~g~~~~~~~~~~i~~~~~d~~~~~~~----~ 70 (441)
24169 T 1JDN_A 5 LPPQKIEVLVLLPQDDSYL----------FSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRA----L 70 (441)
24170 T ss_dssp --CCCEEEEEEECSCTTST----------TCHHHHHHHHHHHHHHHTC-------CCSSCCEEEEEEECTTSHHH----H
24171 T ss_pred CCCCeEEEEEEccCCCCCC----------CcHHHHHHHHHHHHHHHhccCCCCcCCCCCCEEEEEEecCCCChHH----H
24172 Confidence 4567899999999987531 2456788999999999998764 35688899998888776432 2
24173
24174
24175 Q NP_000836.2 117 LTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDN-TRYDFFSRV 195 (908)
24176 Q Consensus 117 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~-~~~~~~~~~ 195 (908)
24177 .+.++++... ..++++++||+.++..+..++.++...++|+|++.+..+.+... ..+++++++
24178 T Consensus 71 ~~~~~~l~~~----------------~~~~v~~viG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~ 134 (441)
24179 T 1JDN_A 71 FSLVDRVAAA----------------RGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRV 134 (441)
24180 T ss_dssp HHHHHHHHHT----------------TTCCCSEEECCCSHHHHHHHHHHHHHTTCCEEESCCCSGGGGCCSSTTTTEEEC
24181 T ss_pred HHHHHHHHHH----------------hCCCCCEEECCCCHHhHHHHHHHHhhcCCcEEEecccchhhccchhhcccceee
24182 Confidence 2233322210 01578999998888777788888999999999988766655443 346889999
24183
24184
24185 Q NP_000836.2 196 VPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESG---VEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
24186 Q Consensus 196 ~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~---~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
24187 .++....++++++++++++|+++++++.++.++... .+.+++.+++. ++++... .+.. .+..++...+++++.
24188 T Consensus 135 ~~~~~~~~~~~~~~l~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~~-~~~~-~~~~~~~~~~~~i~~- 210 (441)
24189 T 1JDN_A 135 APAYAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEE-GLHTSIY-SFDE-TKDLDLEDIVRNIQA- 210 (441)
24190 T ss_dssp SCCTHHHHHHHHHHHHHTTCCEEEEEEECCSSSCHHHHHHHHHHHHHHHH-TCEEEEE-EECT-TSCCCHHHHHHHHHT-
24191 T ss_pred ccCHHHHHHHHHHHHHHcCCeEEEEEEeCCcccceeeEEhhHHHHHHHHc-CCeeEEE-eccC-CCCCCHHHHHHHHHh-
24192 Confidence 999999999999999888999999999877766655 67777777765 4665532 2211 123456667777763
24193
24194
24195 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSK-----IAPV-----YQQEEIAEGAVTILPKRASIDGF 341 (908)
24196 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~-----~~~~-----~~~~~~~~g~~~~~~~~~~~~~~ 341 (908)
24197 . +++|++......+..+++++++.|+.. .+.|+..+..... .... ........+.+......
24198 T Consensus 211 ~-~~~vv~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 283 (441)
24199 T 1JDN_A 211 S-ERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLR------ 283 (441)
24200 T ss_dssp T-CSEEEEECCHHHHHHHHHHHHHTTCTTSSSEEEEECGGGCGGGCCSCCCCSSTTHHHHHHHGGGEEEEEECC------
24201 T ss_pred c-CcEEEEEcCHHHHHHHHHHHHHCCCCCCCEEEEEEeccCccccCCCCccCCCcCcHHHHHHHHHcchhcccC------
24202 Confidence 3 788888777777888899998888754 3667665421110 0000 00000111111111000
24203
24204
24205 Q NP_000836.2 342 DRYFRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHK 421 (908)
24206 Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~ 421 (908)
24207 ...+....|.+.+++.+... . ..| ...+..++..+|||++++++|+++...
24208 T Consensus 284 ---------~~~~~~~~f~~~~~~~~~~~-~---------~~~----------~~~~~~~~~~~yDav~~~~~a~~~~~~ 334 (441)
24209 T 1JDN_A 284 ---------TVKPEFEKFSMEVKSSVEKQ-G---------LNM----------EDYVNMFVEGFHDAILLYVLALHEVLR 334 (441)
24210 T ss_dssp ---------CCCHHHHHHHHHHHHHHHHT-T---------CCC----------SCSCCHHHHHHHHHHHHHHHHHHHHHT
24211 T ss_pred ---------CCChhHHHHHHHHHHHHHhc-C---------CCc----------cccchhHHHHHHHHHHHHHHHHHHHHH
24212 Confidence 00011111222222111100 0 000 012345678899999999999999865
24213
24214
24215 Q NP_000836.2 422 DLCPGYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
24216 Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
24217 ..+. ..++..+.+.|++..|.|.+| .+.|+++|++...+.+++++..+ ++.++.||.|+..
24218 T Consensus 335 ~~~~----------~~~~~~l~~~l~~~~~~g~~G-~i~f~~~g~~~~~~~i~~~~~~~-~g~~~~vg~~~~~ 395 (441)
24219 T 1JDN_A 335 AGYS----------KKDGGKIIQQTWNRTFEGIAG-QVSIDANGDRYGDFSVIAMTDVE-AGTQEVIGDYFGK 395 (441)
24220 T ss_dssp TTCC----------TTCHHHHHHHHSSEEEEETTE-EEEECTTSBBCCEEEEEEEEETT-TTEEEEEEEEETT
24221 T ss_pred cCCC----------CCCHHHHHHHhhcCeEeecce-eEEECCCCCccceEEEEEeecCC-CCeEEEEEEEECC
24222 Confidence 3211 123456777888889999998 89999999887778888876321 3578899999864
24223
24224
24225 No 41
24226 >1JDP_A ATRIAL NATRIURETIC PEPTIDE CLEARANCE RECEPTOR; hormone-receptor complex, natriuretic peptide receptor; HET: NAG, NDG; 2.0A {Homo sapiens} SCOP: c.93.1.1
24227 Probab=99.76 E-value=2e-23 Score=230.14 Aligned_cols=372 Identities=17% Similarity=0.238 Sum_probs=239.1 Template_Neff=11.600
24228
24229 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPD----LLSNITLGVRILDTCSRDTYALEQS 116 (908)
24230 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~----il~g~~l~~~~~d~~~~~~~a~~~~ 116 (908)
24231 ...++++||+++|.++... ..+.....|++.|++++|++++ +++|.++++.+.|+++++.. +
24232 T Consensus 5 ~~~~~i~Igv~~p~~~~~~----------~~~~~~~~~~~~a~~~~n~~~g~~~~~~~~~~i~~~~~d~~~~~~~----~ 70 (441)
24233 T 1JDP_A 5 LPPQKIEVLVLLPQDDSYL----------FSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRA----L 70 (441)
24234 T ss_dssp CCCCEEEEEEEECSSTTST----------TCHHHHHHHHHHHHHHHCC-----CCSCTTCEEEEEEEECTTSTHH----H
24235 T ss_pred CCCCeEEEEEEccCCCCCC----------CcHHHHHHHHHHHHHHHhccCCCCcCCCCCCEEEEEEecCCCChHH----H
24236 Confidence 4567899999999987531 2456788999999999998764 35688899998888776432 2
24237
24238
24239 Q NP_000836.2 117 LTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDN-TRYDFFSRV 195 (908)
24240 Q Consensus 117 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~-~~~~~~~~~ 195 (908)
24241 .+.++++... ..++++++||+.++..+..++.++...++|+|++.+..+.+... ..+++++++
24242 T Consensus 71 ~~~~~~l~~~----------------~~~~v~~viG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~ 134 (441)
24243 T 1JDP_A 71 FSLVDRVAAA----------------RGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRV 134 (441)
24244 T ss_dssp HHHHHHHHHT----------------TTCCCSEEECCCSHHHHHHHHHHHHHHTCCEEESCCCSGGGGCTTTTTTTEEEC
24245 T ss_pred HHHHHHHHHH----------------hCCCCCEEECCCCHHhHHHHHHHHhhcCCcEEEecccchhhccchhhcccceee
24246 Confidence 2233322210 01578999998888777788888999999999988766655443 346889999
24247
24248
24249 Q NP_000836.2 196 VPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESG---VEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
24250 Q Consensus 196 ~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~---~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
24251 .++....++++++++++++|+++++++.++.++... .+.+++.+++. ++++... .+.. .+..++...+++++.
24252 T Consensus 135 ~~~~~~~~~~~~~~l~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~~-~~~~-~~~~~~~~~~~~i~~- 210 (441)
24253 T 1JDP_A 135 APAYAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEE-GLHTSIY-SFDE-TKDLDLEDIVRNIQA- 210 (441)
24254 T ss_dssp SCCHHHHHHHHHHHHHHHTCCEEEEEEECCSSSCHHHHHHHHHHHHHHHH-TCEEEEE-EECT-TSCCCHHHHHHHHHH-
24255 T ss_pred ccCHHHHHHHHHHHHHHcCCeEEEEEEeCCcccceeeEEhhHHHHHHHHc-CCeeEEE-eccC-CCCCCHHHHHHHHHh-
24256 Confidence 999999999999999888999999999877766655 67777777765 4665532 2211 123456667777763
24257
24258
24259 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSK-----IAPV-----YQQEEIAEGAVTILPKRASIDGF 341 (908)
24260 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~-----~~~~-----~~~~~~~~g~~~~~~~~~~~~~~ 341 (908)
24261 . +++|++......+..+++++++.|+.. .+.|+..+..... .... ........+.+......
24262 T Consensus 211 ~-~~~vv~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 283 (441)
24263 T 1JDP_A 211 S-ERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLR------ 283 (441)
24264 T ss_dssp H-CSEEEEESCHHHHHHHHHHHHHTTCTTTTCEEEEECSSCCCSTTTCTTCCSSTTHHHHHHHGGGEEEEEECC------
24265 T ss_pred c-CcEEEEEcCHHHHHHHHHHHHHCCCCCCCEEEEEEeccCccccCCCCccCCCcCcHHHHHHHHHcchhcccC------
24266 Confidence 3 788888777777888899998888754 3667665421110 0000 00000111111111000
24267
24268
24269 Q NP_000836.2 342 DRYFRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHK 421 (908)
24270 Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~ 421 (908)
24271 ...+....|.+.+++.+... . ..| ...+..++..+|||++++++|+++...
24272 T Consensus 284 ---------~~~~~~~~f~~~~~~~~~~~-~---------~~~----------~~~~~~~~~~~yDav~~~~~a~~~~~~ 334 (441)
24273 T 1JDP_A 284 ---------TVKPEFEKFSMEVKSSVEKQ-G---------LNM----------EDYVNMFVEGFHDAILLYVLALHEVLR 334 (441)
24274 T ss_dssp ---------CCCHHHHHHHHHHHHHHHTT-T---------CCC----------CSSCCHHHHHHHHHHHHHHHHHHHHHH
24275 T ss_pred ---------CCChhHHHHHHHHHHHHHhc-C---------CCc----------cccchhHHHHHHHHHHHHHHHHHHHHH
24276 Confidence 00011111222222111100 0 000 012345678899999999999999865
24277
24278
24279 Q NP_000836.2 422 DLCPGYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
24280 Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
24281 ..+. ..++..+.+.|++..|.|.+| .+.|+++|++...+.+++++..+ ++.++.||.|+..
24282 T Consensus 335 ~~~~----------~~~~~~l~~~l~~~~~~g~~G-~i~f~~~g~~~~~~~i~~~~~~~-~g~~~~vg~~~~~ 395 (441)
24283 T 1JDP_A 335 AGYS----------KKDGGKIIQQTWNRTFEGIAG-QVSIDANGDRYGDFSVIAMTDVE-AGTQEVIGDYFGK 395 (441)
24284 T ss_dssp TTCC----------TTCHHHHHHHHSSEEEEETTE-EEEECTTSBBCCEEEEEEEEETT-TTEEEEEEEEETT
24285 T ss_pred cCCC----------CCCHHHHHHHhhcCeEeecce-eEEECCCCCccceEEEEEeecCC-CCeEEEEEEEECC
24286 Confidence 3211 123456777888889999998 89999999887778888876321 3578899999864
24287
24288
24289 No 42
24290 >4F11_A Gamma-aminobutyric acid type B receptor; Venus flytrap module, G-protein coupled; 2.38A {Homo sapiens}
24291 Probab=99.72 E-value=2e-22 Score=221.47 Aligned_cols=391 Identities=19% Similarity=0.262 Sum_probs=245.4 Template_Neff=11.600
24292
24293 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
24294 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
24295 .....++++||+++|.++.... ...+.....|++.|++++|+.++ ++|+++++++.|+++++..+.+
24296 T Consensus 8 ~~~~~~~i~ig~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~n~~~~-~~~~~i~l~~~d~~~~~~~~~~---- 74 (433)
24297 T 4F11_A 8 PPPSSPPLSIMGLMPLTKEVAK--------GSIGRGVLPAVELAIEQIRNESL-LRPYFLDLRLYDTECDNAKGLK---- 74 (433)
24298 T ss_dssp ---CCCEEEEEEEECCCTTSTT--------HHHHHHHHHHHHHHHHHHHHTTT-TTTCEEEEEEEECTTCHHHHHH----
24299 T ss_pred CCCCCCCeEEEEEEecCCcccC--------CcccccHHHHHHHHHHHHHhccC-CCCceEEEEEEcCCCChhHHHH----
24300 Confidence 3456789999999999864310 02456788999999999998764 5578899999998876544333
24301
24302
24303 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
24304 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
24305 .+.+++.. .++++++||+.++..+..++.++...++|+|++.+..+.+.+...+++++++.++
24306 T Consensus 75 ~~~~l~~~-----------------~~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~ 137 (433)
24307 T 4F11_A 75 AFYDAIKY-----------------GPNHLMVFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADKKKYPYFFRTVPS 137 (433)
24308 T ss_dssp HHHHHHHH-----------------SCCCSEEEECCSHHHHHHHHHTHHHHTCEEEESSCCCGGGGCTTTCTTEEESSCC
24309 T ss_pred HHHHHHHh-----------------CCCeEEEEcCCChhHHHHHHHHccccCCeEEEeccCCHHHcCCCCCCceeeeCCC
24310 Confidence 33333320 0368899998888777778888889999999988766655443357889999999
24311
24312
24313 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
24314 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
24315 ...++.++++++++++|+++++++.++.++....+.+++.+++. ++++.....+. .++...+++++. .++++|
24316 T Consensus 138 ~~~~~~~~~~~~~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~-----~~~~~~~~~~~~-~~~~~v 210 (433)
24317 T 4F11_A 138 DNAVNPAILKLLKHYQWKRVGTLTQDVQRFSEVRNDLTGVLYGE-DIEISDTESFS-----NDPCTSVKKLKG-NDVRII 210 (433)
24318 T ss_dssp GGGHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHSSSS-SCEEEEEEEES-----SCCHHHHHHHHH-TTCCEE
24319 T ss_pred hhhhhHHHHHHHHHcCCCEEEEEEecchhhHHHHHHHHHHHhcC-CeEEEeeeeec-----CChhHHHHHHhc-CCcEEE
24320 Confidence 98889999999988899999999987777777778888877765 46654332221 235556667763 578888
24321
24322
24323 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVY-------------QQEEIAEGAVTILPKRASIDGFDRY 344 (908)
24324 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (908)
24325 ++.........+++++++.|+.. ++.|+..+ +........ .......+.+.+.........+..+
24326 T Consensus 211 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 289 (433)
24327 T 4F11_A 211 LGQFDQNMAAKVFCCAYEENMYGSKYQWIIPG-WYEPSWWEQVHTEANSSRCLRKNLLAAMEGYIGVDFEPLSSKQIKTI 289 (433)
24328 T ss_dssp EEECCHHHHHHHHHHHHHTTCCSTTCEEEEES-CSCTTTTTCC------CCSCHHHHHHHHTTCEEEEECSSCCCCCCCT
24329 T ss_pred EEeCCHHHHHHHHHHHHHcCCcCCCeEEEccC-CcCcchhHHhhccccCCCccHHHHHHHHccceeeEeecCCCCCcccc
24330 Confidence 77766667788899988888753 45666654 221110000 0011122222221110000000000
24331
24332
24333 Q NP_000836.2 345 FRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLC 424 (908)
24334 Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~ 424 (908)
24335 ......+ +.+.+.+... ...+..++..+|||++++++|++++....+
24336 T Consensus 290 ----------~~~~~~~-~~~~~~~~~~----------------------~~~~~~~~~~~ydav~~~~~al~~~~~~~~ 336 (433)
24337 T 4F11_A 290 ----------SGKTPQQ-YEREYNNKRS----------------------GVGPSKFHGYAYDGIWVIAKTLQRAMETLH 336 (433)
24338 T ss_dssp ----------TSCCHHH-HHHHHHHHHT----------------------TSCCCTTHHHHHHHHHHHHHHHHHHHHHHH
24339 T ss_pred ----------CCCCHHH-HHHHHHHhcc----------------------CCChhhcchHHHHHHHHHHHHHHHHHHHHH
24340 Confidence 0000111 1111111000 012345678899999999999999875422
24341
24342
24343 Q NP_000836.2 425 PGY---IGLCP-RMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQL---HL 497 (908)
24344 Q Consensus 425 ~~~---~~~~~-~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~---~~ 497 (908)
24345 ... ...|. .....++..+.++|++..|.|.+| .+.|+ +|++...+.+++++ ++.++.||.|+... .+
24346 T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~G~~G-~i~f~-~g~~~~~~~i~~~~----~g~~~~v~~~~~~~~~~~~ 410 (433)
24347 T 4F11_A 337 ASSRHQRIQDFNYTDHTLGRIILNAMNETNFFGVTG-QVVFR-NGERMGTIKFTQFQ----DSREVKVGEYNAVADTLEI 410 (433)
24348 T ss_dssp HSSSCCCGGGCSSCCHHHHHHHHHHHHTCEEEETTE-EEEEE-TTEEECEEEEEEEE----TTEEEEEEEEETTTTEEEE
24349 T ss_pred hcCCCCchhhcCCCChHHHHHHHHHHHcCcEEeece-eEEee-CCceeeEEEEEEEE----CCcEEEEEEEECCCCeEEE
24350 Confidence 100 00000 001124556778888889999999 89999 89987788888887 35789999998642 12
24351
24352
24353 Q NP_000836.2 498 KVEDMQWAH 506 (908)
24354 Q Consensus 498 ~~~~i~w~~ 506 (908)
24355 ....+.|.+
24356 T Consensus 411 ~~~~~~w~g 419 (433)
24357 T 4F11_A 411 INDTIRFQG 419 (433)
24358 T ss_dssp CTTTCCCSS
24359 T ss_pred ecCcccCCC
24360 Confidence 223466754
24361
24362
24363 No 43
24364 >4MS4_B Gamma-aminobutyric acid type B receptor; heterodimeric protein complex, Venus Flytrap; HET: NAG, 2C0; 1.9A {Homo sapiens}
24365 Probab=99.72 E-value=2e-22 Score=221.47 Aligned_cols=391 Identities=19% Similarity=0.262 Sum_probs=246.4 Template_Neff=11.600
24366
24367 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
24368 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
24369 .....++++||+++|.++.... ...+.....|++.|++++|+.++ ++|+++++++.|+++++..+.+
24370 T Consensus 8 ~~~~~~~i~ig~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~n~~~~-~~~~~i~l~~~d~~~~~~~~~~---- 74 (433)
24371 T 4MS4_B 8 PPPSSPPLSIMGLMPLTKEVAK--------GSIGRGVLPAVELAIEQIRNESL-LRPYFLDLRLYDTECDNAKGLK---- 74 (433)
24372 T ss_dssp -CTTCCEEEEEEEECCCTTSTT--------HHHHHHHHHHHHHHHHHHHHTTT-TTTCEEEEEEEECTTCHHHHHH----
24373 T ss_pred CCCCCCCeEEEEEEecCCcccC--------CcccccHHHHHHHHHHHHHhccC-CCCceEEEEEEcCCCChhHHHH----
24374 Confidence 3456789999999999864310 02456788999999999998764 5578899999998876544333
24375
24376
24377 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
24378 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
24379 .+.+++.. .++++++||+.++..+..++.++...++|+|++.+..+.+.+...+++++++.++
24380 T Consensus 75 ~~~~l~~~-----------------~~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~ 137 (433)
24381 T 4MS4_B 75 AFYDAIKY-----------------GPNHLMVFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADKKKYPYFFRTVPS 137 (433)
24382 T ss_dssp HHHHHHHH-----------------SCCCSEEEECCSHHHHHHHHHHGGGGTCEEEESSCCCGGGGCTTTCTTEEESSCC
24383 T ss_pred HHHHHHHh-----------------CCCeEEEEcCCChhHHHHHHHHccccCCeEEEeccCCHHHcCCCCCCceeeeCCC
24384 Confidence 33333320 0368899998888777778888889999999988766655443357889999999
24385
24386
24387 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
24388 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
24389 ...++.++++++++++|+++++++.++.++....+.+++.+++. ++++.....+. .++...+++++. .++++|
24390 T Consensus 138 ~~~~~~~~~~~~~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~-----~~~~~~~~~~~~-~~~~~v 210 (433)
24391 T 4MS4_B 138 DNAVNPAILKLLKHYQWKRVGTLTQDVQRFSEVRNDLTGVLYGE-DIEISDTESFS-----NDPCTSVKKLKG-NDVRII 210 (433)
24392 T ss_dssp GGGHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHTTT-TCEEEEEEEES-----SCTHHHHHHHHH-TTCCEE
24393 T ss_pred hhhhhHHHHHHHHHcCCCEEEEEEecchhhHHHHHHHHHHHhcC-CeEEEeeeeec-----CChhHHHHHHhc-CCcEEE
24394 Confidence 98889999999988899999999987777777778888877765 46654332221 235556667763 578888
24395
24396
24397 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVY-------------QQEEIAEGAVTILPKRASIDGFDRY 344 (908)
24398 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (908)
24399 ++.........+++++++.|+.. ++.|+..+ +........ .......+.+.+.........+..+
24400 T Consensus 211 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 289 (433)
24401 T 4MS4_B 211 LGQFDQNMAAKVFCCAYEENMYGSKYQWIIPG-WYEPSWWEQVHTEANSSRCLRKNLLAAMEGYIGVDFEPLSSKQIKTI 289 (433)
24402 T ss_dssp EEECCHHHHHHHHHHHHHTTCCSTTCEEEEES-CSCTTTTC----------CCHHHHHHHHTTCEEEEECSSCCCCCCCT
24403 T ss_pred EEeCCHHHHHHHHHHHHHcCCcCCCeEEEccC-CcCcchhHHhhccccCCCccHHHHHHHHccceeeEeecCCCCCcccc
24404 Confidence 77766667788899988888753 45666654 221110000 0011122222221110000000000
24405
24406
24407 Q NP_000836.2 345 FRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLC 424 (908)
24408 Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~ 424 (908)
24409 ......+ +.+.+.+... ...+..++..+|||++++++|++++....+
24410 T Consensus 290 ----------~~~~~~~-~~~~~~~~~~----------------------~~~~~~~~~~~ydav~~~~~al~~~~~~~~ 336 (433)
24411 T 4MS4_B 290 ----------SGKTPQQ-YEREYNNKRS----------------------GVGPSKFHGYAYDGIWVIAKTLQRAMETLH 336 (433)
24412 T ss_dssp ----------TSSCHHH-HHHHHHHHCC----------------------SSCCCTTHHHHHHHHHHHHHHHHHHTCSSC
24413 T ss_pred ----------CCCCHHH-HHHHHHHhcc----------------------CCChhhcchHHHHHHHHHHHHHHHHHHHHH
24414 Confidence 0000111 1111111000 012345678899999999999999875422
24415
24416
24417 Q NP_000836.2 425 PGY---IGLCP-RMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQL---HL 497 (908)
24418 Q Consensus 425 ~~~---~~~~~-~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~---~~ 497 (908)
24419 ... ...|. .....++..+.++|++..|.|.+| .+.|+ +|++...+.+++++ ++.++.||.|+... .+
24420 T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~G~~G-~i~f~-~g~~~~~~~i~~~~----~g~~~~v~~~~~~~~~~~~ 410 (433)
24421 T 4MS4_B 337 ASSRHQRIQDFNYTDHTLGRIILNAMNETNFFGVTG-QVVFR-NGERMGTIKFTQFQ----DSREVKVGEYNAVADTLEI 410 (433)
24422 T ss_dssp HHHHHHHHHHCCSCCHHHHHHHHHHHHTCEEEETTE-EEEEE-TTEEECEEEEEEEC----SSCEEEEEEEETTTTEEEE
24423 T ss_pred hcCCCCchhhcCCCChHHHHHHHHHHHcCcEEeece-eEEee-CCceeeEEEEEEEE----CCcEEEEEEEECCCCeEEE
24424 Confidence 100 00000 001124556778888889999999 89999 89987788888887 35789999998642 12
24425
24426
24427 Q NP_000836.2 498 KVEDMQWAH 506 (908)
24428 Q Consensus 498 ~~~~i~w~~ 506 (908)
24429 ....+.|.+
24430 T Consensus 411 ~~~~~~w~g 419 (433)
24431 T 4MS4_B 411 INDTIRFQG 419 (433)
24432 T ss_dssp CTTTCCCSS
24433 T ss_pred ecCcccCCC
24434 Confidence 223466754
24435
24436
24437 No 44
24438 >4MQE_A Gamma-aminobutyric acid type B receptor; heterodimeric protein complex, Venus Flytrap; HET: MAN, NAG, FUC; 2.35A {Homo sapiens}
24439 Probab=99.67 E-value=2e-21 Score=212.36 Aligned_cols=376 Identities=21% Similarity=0.283 Sum_probs=233.6 Template_Neff=11.700
24440
24441 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
24442 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
24443 +++++||+++|.++.. ..+.....|++.|++++|+.+++++|+++++.+.|+++++..+ .+.+.+
24444 T Consensus 3 ~~~i~Ig~i~p~~~~~-----------~~~~~~~~~~~~a~~~~n~~~~~~~g~~i~~~~~d~~~~~~~~----~~~~~~ 67 (420)
24445 T 4MQE_A 3 RRAVYIGALFPMSGGW-----------PGGQACQPAVEMALEDVNSRRDILPDYELKLIHHDSKCDPGQA----TKYLYE 67 (420)
24446 T ss_dssp CEEEEEEEEECSSSSC-----------CTHHHHHHHHHHHHHHHHHCTTTCSSEEEEEEEEECTTCHHHH----HHHHHH
24447 T ss_pred CceeEEEEEEecCCCC-----------CccccHHHHHHHHHHHHHcCCCCCCCcEEEEEEecCCCChHHH----HHHHHH
24448 Confidence 4689999999997642 2456788999999999999877666889999999887664432 333333
24449
24450
24451 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
24452 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
24453 ++. .++++++||+.++.....++..+...++|+|++.+..+.+++...+++++++.++....
24454 T Consensus 68 l~~------------------~~~v~~iig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (420)
24455 T 4MQE_A 68 LLY------------------NDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATLH 129 (420)
24456 T ss_dssp HHS------------------SSSCCSEEECCSHHHHHHHHHHGGGGTCEEEESSCCCGGGCCTTTCTTEEESSCCGGGH
24457 T ss_pred HHh------------------CCCeEEEEEcCchHHHHHHHHHHhhcCCEEEechhcChhhcCCCCCCceEecCCChhhc
24458 Confidence 332 14788999988777777777888899999999877665554333468899999998888
24459
24460
24461 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFA 282 (908)
24462 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~ 282 (908)
24463 +.++++++++++|++|++++.++.++....+.+++.+++. ++++.....+. .+....+++++. .++|+|++..
24464 T Consensus 130 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~-----~d~~~~~~~~~~-~~~~~ii~~~ 202 (420)
24465 T 4MQE_A 130 NPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERVKEA-GIEITFRQSFF-----SDPAVPVKNLKR-QDARIIVGLF 202 (420)
24466 T ss_dssp HHHHHHHHHHHTCCEEEEEEESCHHHHHHHHHHHHHHHHT-TCEEEEEEEES-----SCCHHHHHHHHH-TTCCEEEEEC
24467 T ss_pred hHHHHHHHHHhCCcEEEEEEeCCcchhhHHHHHHHHHHHC-CcEEEEEeccc-----CCCchHHHHHHh-CCCEEEEEEC
24468 Confidence 8889998888899999999977777777778888887765 45554332221 234455666663 5788887776
24469
24470
24471 Q NP_000836.2 283 NEDDIRRILEAAKKLNQSG-HFLWIGSDS----WGSKIAPV-----YQQEEIAEGAVTILPKRASIDGFDRYFRSRTL-- 350 (908)
24472 Q Consensus 283 ~~~~~~~~l~~~~~~g~~~-~~~~i~~~~----~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-- 350 (908)
24473 .......+++++++.|+.. .+.|+..+. |....... ........|.+...... +.....
24474 T Consensus 203 ~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---------~~~~~~~~ 273 (420)
24475 T 4MQE_A 203 YETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIYDPSINCTVDEMTEAVEGHITTEIVM---------LNPANTRS 273 (420)
24476 T ss_dssp CHHHHHHHHHHHHHTTCCSTTCEEEEESCSCTTGGGSCCTTCCSCHHHHHHHHTTCEEEEECC---------SCSSCCCC
24477 T ss_pred CHHHHHHHHHHHHHcCccCCCeEEEeecccccchhhhcCCCCCCCHHHHHHHHhcceeEEEec---------cCCCCCCc
24478 Confidence 6656778888888887643 345665431 11000000 00001122222111000 000000
24479
24480
24481 Q NP_000836.2 351 ANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGY-IG 429 (908)
24482 Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~-~~ 429 (908)
24483 ...+....|.+.+.+.++.. +.......++..+|||++++++|++++........ ..
24484 T Consensus 274 ~~~~~~~~f~~~~~~~~~~~----------------------p~~~~~~~~~~~~ydav~~~~~al~~~~~~~~~~~~~~ 331 (420)
24485 T 4MQE_A 274 ISNMTSQEFVEKLTKRLKRH----------------------PEETGGFQEAPLAYDAIWALALALNKTSGGGGRSGVRL 331 (420)
24486 T ss_dssp TTSCCHHHHHHHHHHHCSSC----------------------TTTSTTTTTHHHHHHHHHHHHHHHHHHC--------CG
24487 T ss_pred ccCCCHHHHHHHHHHHHhcC----------------------CccCCCCcchHHHHHHHHHHHHHHHHHhccCccCCCCH
24488 Confidence 00011111222222211100 00001124567899999999999998864321100 00
24489
24490
24491 Q NP_000836.2 430 LCPR-MSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
24492 Q Consensus 430 ~~~~-~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
24493 .|.. .....+..+.+.+++..|.|.+| .+.||++|++...+.+.+++ ++.++.+|.|+..
24494 T Consensus 332 ~~~~~~~~~~~~~l~~~l~~~~~~G~~G-~~~f~~~g~~~~~~~v~~~~----~~~~~~v~~~~~~ 392 (420)
24495 T 4MQE_A 332 EDFNYNNQTITDQIYRAMNSSSFEGVSG-HVVFDASGSRMAWTLIEQLQ----GGSYKKIGYYDST 392 (420)
24496 T ss_dssp GGCCTTCHHHHHHHHHHHHTCCEEETTE-EECBCTTSBBCCEEEEEEEC----SSSEEEEEEEETT
24497 T ss_pred HHcCCCChHHHHHHHHHHhcCceecccc-eEEEcCCCCcceeEEEEEee----CCceEEEEEEEcC
24498 Confidence 0000 00123445667777788999988 89999999987777788876 3578899999865
24499
24500
24501 No 45
24502 >4MS4_A Gamma-aminobutyric acid type B receptor; heterodimeric protein complex, Venus Flytrap; HET: 2C0, NAG; 1.9A {Homo sapiens}
24503 Probab=99.67 E-value=2e-21 Score=212.36 Aligned_cols=376 Identities=21% Similarity=0.283 Sum_probs=233.6 Template_Neff=11.700
24504
24505 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
24506 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
24507 +++++||+++|.++.. ..+.....|++.|++++|+.+++++|+++++.+.|+++++..+ .+.+.+
24508 T Consensus 3 ~~~i~Ig~i~p~~~~~-----------~~~~~~~~~~~~a~~~~n~~~~~~~g~~i~~~~~d~~~~~~~~----~~~~~~ 67 (420)
24509 T 4MS4_A 3 RRAVYIGALFPMSGGW-----------PGGQACQPAVEMALEDVNSRRDILPDYELKLIHHDSKCDPGQA----TKYLYE 67 (420)
24510 T ss_dssp CEEEEEEEEECSSSSC-----------CTHHHHHHHHHHHHHHHHTCTTTCTTEEEEEEEEECTTCHHHH----HHHHHH
24511 T ss_pred CceeEEEEEEecCCCC-----------CccccHHHHHHHHHHHHHcCCCCCCCcEEEEEEecCCCChHHH----HHHHHH
24512 Confidence 4689999999997642 2456788999999999999877666889999999887664432 333333
24513
24514
24515 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
24516 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
24517 ++. .++++++||+.++.....++..+...++|+|++.+..+.+++...+++++++.++....
24518 T Consensus 68 l~~------------------~~~v~~iig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (420)
24519 T 4MS4_A 68 LLY------------------NDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATLH 129 (420)
24520 T ss_dssp HHS------------------SSSCCSEEECCSHHHHHHHHHHGGGGTCEEEESSCCCGGGGCTTTSTTEEESSCCGGGH
24521 T ss_pred HHh------------------CCCeEEEEEcCchHHHHHHHHHHhhcCCEEEechhcChhhcCCCCCCceEecCCChhhc
24522 Confidence 332 14788999988777777777888899999999877665554333468899999998888
24523
24524
24525 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFA 282 (908)
24526 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~ 282 (908)
24527 +.++++++++++|++|++++.++.++....+.+++.+++. ++++.....+. .+....+++++. .++|+|++..
24528 T Consensus 130 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~-----~d~~~~~~~~~~-~~~~~ii~~~ 202 (420)
24529 T 4MS4_A 130 NPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERVKEA-GIEITFRQSFF-----SDPAVPVKNLKR-QDARIIVGLF 202 (420)
24530 T ss_dssp HHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEES-----SCCHHHHHHHHH-TTCCEEEEEC
24531 T ss_pred hHHHHHHHHHhCCcEEEEEEeCCcchhhHHHHHHHHHHHC-CcEEEEEeccc-----CCCchHHHHHHh-CCCEEEEEEC
24532 Confidence 8889998888899999999977777777778888887765 45554332221 234455666663 5788887776
24533
24534
24535 Q NP_000836.2 283 NEDDIRRILEAAKKLNQSG-HFLWIGSDS----WGSKIAPV-----YQQEEIAEGAVTILPKRASIDGFDRYFRSRTL-- 350 (908)
24536 Q Consensus 283 ~~~~~~~~l~~~~~~g~~~-~~~~i~~~~----~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-- 350 (908)
24537 .......+++++++.|+.. .+.|+..+. |....... ........|.+...... +.....
24538 T Consensus 203 ~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---------~~~~~~~~ 273 (420)
24539 T 4MS4_A 203 YETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIYDPSINCTVDEMTEAVEGHITTEIVM---------LNPANTRS 273 (420)
24540 T ss_dssp CHHHHHHHHHHHHHHTCCSTTCEEEEETTSCTTGGGSCCTTCCCCHHHHHHHHTTCEEEEECC---------SCSSCCCC
24541 T ss_pred CHHHHHHHHHHHHHcCccCCCeEEEeecccccchhhhcCCCCCCCHHHHHHHHhcceeEEEec---------cCCCCCCc
24542 Confidence 6656778888888887643 345665431 11000000 00001122222111000 000000
24543
24544
24545 Q NP_000836.2 351 ANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGY-IG 429 (908)
24546 Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~-~~ 429 (908)
24547 ...+....|.+.+.+.++.. +.......++..+|||++++++|++++........ ..
24548 T Consensus 274 ~~~~~~~~f~~~~~~~~~~~----------------------p~~~~~~~~~~~~ydav~~~~~al~~~~~~~~~~~~~~ 331 (420)
24549 T 4MS4_A 274 ISNMTSQEFVEKLTKRLKRH----------------------PEETGGFQEAPLAYDAIWALALALNKTSGGGGRSGVRL 331 (420)
24550 T ss_dssp TTSCCHHHHHHHHHHHCSSC----------------------GGGSTTTTTHHHHHHHHHHHHHHHHHHC--------CG
24551 T ss_pred ccCCCHHHHHHHHHHHHhcC----------------------CccCCCCcchHHHHHHHHHHHHHHHHHhccCccCCCCH
24552 Confidence 00011111222222211100 00001124567899999999999998864321100 00
24553
24554
24555 Q NP_000836.2 430 LCPR-MSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
24556 Q Consensus 430 ~~~~-~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
24557 .|.. .....+..+.+.+++..|.|.+| .+.||++|++...+.+.+++ ++.++.+|.|+..
24558 T Consensus 332 ~~~~~~~~~~~~~l~~~l~~~~~~G~~G-~~~f~~~g~~~~~~~v~~~~----~~~~~~v~~~~~~ 392 (420)
24559 T 4MS4_A 332 EDFNYNNQTITDQIYRAMNSSSFEGVSG-HVVFDASGSRMAWTLIEQLQ----GGSYKKIGYYDST 392 (420)
24560 T ss_dssp GGCCTTCSHHHHHHHHHHHTCEEEETTE-EEECCTTTCSCCEEEEEEEE----TTEEEEEEEEETT
24561 T ss_pred HHcCCCChHHHHHHHHHHhcCceecccc-eEEEcCCCCcceeEEEEEee----CCceEEEEEEEcC
24562 Confidence 0000 00123445667777788999988 89999999987777788876 3578899999865
24563
24564
24565 No 46
24566 >3Q41_C Glutamate [NMDA] receptor subunit zeta-1; NTD, NMDA, GluN1, ion channel; HET: NAG; 3.4A {Rattus norvegicus}
24567 Probab=99.66 E-value=4.8e-21 Score=206.51 Aligned_cols=348 Identities=19% Similarity=0.271 Sum_probs=226.6 Template_Neff=11.800
24568
24569 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRI--LDTCSRDTYALEQSLTF 119 (908)
24570 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~--~d~~~~~~~a~~~~~~~ 119 (908)
24571 ..++++||+++|.+ ....|++.|++++|++++ +.++++.. .|++.++.. .+.+.
24572 T Consensus 3 ~~~~i~Ig~i~~~~------------------~~~~~~~~a~~~~n~~~~---~~~i~l~~~~~d~~~~~~~---~~~~~ 58 (384)
24573 T 3Q41_C 3 DPKIVNIGAVLSTR------------------KHEQMFREAVNQANKRHG---SWKIQLNATSVTHKPNAIQ---MALSV 58 (384)
24574 T ss_dssp -CCCBEEEEEESSH------------------HHHHHHHHHHHTTTTTSC---TTTSCBCCEEEECCSSSSH---HHHHC
24575 T ss_pred CCceeEEEeeechH------------------HHHHHHHHHHHHHHhcCC---CcceEEEEEEecCCCCHHH---HHHHH
24576 Confidence 35789999999874 245789999999998754 34566655 776654322 12222
24577
24578
24579 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAAS-----SVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSR 194 (908)
24580 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s-----~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~ 194 (908)
24581 .+.+.. +++++++|+..+ .....++.++...++|+|++.+..+.+.+...++++++
24582 T Consensus 59 ~~~l~~-------------------~~v~~vig~~~~~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~ 119 (384)
24583 T 3Q41_C 59 CEDLIS-------------------SQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLR 119 (384)
24584 T ss_dssp CCCCGG-------------------GCEEEEEECCCCSTTTTTTHHHHHHHHHTTTCCEEESSCCCGGGTCTTSCTTEEE
24585 T ss_pred HHHHHh-------------------cCceEEEEcCCCCCCCCCChhHHHHHhHhcCCCEEecccCChhHcCCcccccEee
24586 Confidence 222221 478899997665 24456677888899999998876665554434688999
24587
24588
24589 Q NP_000836.2 195 VVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPN 274 (908)
24590 Q Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (908)
24591 +.++....+.++++++++++|+++++++.++.++....+.+++.+++. ++++.....+. ....+....+++++. .+
24592 T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~~~~~~~~~~~~l~~-~~ 195 (384)
24593 T 3Q41_C 120 TVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRLETLLEER-ESKAEKVLQFD--PGTKNVTALLMEARE-LE 195 (384)
24594 T ss_dssp SSCCSGGGHHHHHHHHHTTTCCCCEEEEESSHHHHHHHHHHHHHHHTS-SCCCSEEEEEC--SSCSCCHHHHHHHHT-SS
24595 T ss_pred cCCCHHHHHHHHHHHHHHcCCcEEEEEEecCcChhHHHHHHHHHHHhc-CceeEEEEeeC--CCChhHHHHHHHHHh-CC
24596 Confidence 999998889999999988899999999987777777777888777765 35554332222 122345566777763 57
24597
24598
24599 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANN 353 (908)
24600 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (908)
24601 +++|++.........+++++++.|+.. ++.|+..+.|..... ......+.+.
24602 T Consensus 196 ~~~ii~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~----------------------- 248 (384)
24603 T 3Q41_C 196 ARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNA----LRYAPDGIIG----------------------- 248 (384)
24604 T ss_dssp CCEEEEECCHHHHHHHHHHHHTTTCSSTTCEEEECSSTTSTHH----HHHCCTTCEE-----------------------
24605 T ss_pred CeEEEEECCHHHHHHHHHHHHHcCCcCCCeEEEEecccCCcch----HhhCCCcEEE-----------------------
24606 Confidence 888888777777788888888888753 456766543321100 0000000000
24607
24608
24609 Q NP_000836.2 354 RRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG-YIGLCP 432 (908)
24610 Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~-~~~~~~ 432 (908)
24611 + . . ..+..++..+|||++++++|++++....+.. ....|.
24612 T Consensus 249 -----~----~-~-----------------------------~~~~~~~~~~yDa~~~~~~al~~~~~~~~~~~~~~~c~ 289 (384)
24613 T 3Q41_C 249 -----L----Q-L-----------------------------INGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCV 289 (384)
24614 T ss_dssp -----E----E-E-----------------------------TTTTCHHHHHHHHHHHHHHHHHHHTTSSSCCCCCSCCT
24615 T ss_pred -----E----E-e-----------------------------cCCCcchhHHHHHHHHHHHHHHHHHHccCCCCCCCCcc
24616 Confidence 0 0 0 0112456789999999999999887543211 011222
24617
24618
24619 Q NP_000836.2 433 RM--STIDGKELLGYIRA-VNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQLH-LKVEDMQWAHR 507 (908)
24620 Q Consensus 433 ~~--~~~~~~~l~~~l~~-~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~~~-~~~~~i~w~~~ 507 (908)
24621 .. ....+..+.+.|++ ..|.|.+| .+.||++|++. ..+.+++++ ++.++.||.|+.... +....+.|.++
24622 T Consensus 290 ~~~~~~~~~~~l~~~l~~~~~~~g~~G-~i~fd~~g~~~~~~~~i~~~~----~~~~~~vg~~~~~~~~~~~~~~~w~~~ 364 (384)
24623 T 3Q41_C 290 GNTNIWKTGPLFKRVLMSSKYADGVTG-RVEFNEDGDRKFANYSIMNLQ----NRKLVQVGIYNGTHVIPNDRKIIWPGG 364 (384)
24624 T ss_dssp TCCCCCTHHHHHHHHHHSCEECSCSSS-CEECCSSSCCCCCCEEEEEEE----TTEEEEEEEEETTEEEECSSCCCBTTT
24625 T ss_pred CCCchhccHHHHHHHHhcCCcccCCCc-cEEECCCCCccceEEEEEEee----CCcEEEEEEEeCCCcccCCCCccCCCC
24626 Confidence 11 11234456677765 46899988 89999999985 788888887 357899999986531 22235778653
24627
24628
24629 No 47
24630 >5KC8_A Glutamate receptor ionotropic, delta-2; ionotropic glutamate receptor (iGluR), neurotransmission; HET: EDO; 1.751A {Homo sapiens}
24631 Probab=99.64 E-value=9.9e-21 Score=207.43 Aligned_cols=378 Identities=16% Similarity=0.219 Sum_probs=229.7 Template_Neff=11.500
24632
24633 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILD-TCSRDTYALEQSLTFV 120 (908)
24634 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d-~~~~~~~a~~~~~~~~ 120 (908)
24635 .+++++||+++|.++. ....|+++|++++|+++++++|.++++.+.| +++++..+.+. +
24636 T Consensus 3 ~~~~i~Ig~i~p~sg~----------------~~~~a~~~A~~~in~~~~~~~~~~i~~~~~d~~~~~~~~~~~~----~ 62 (429)
24637 T 5KC8_A 3 GDSIIHIGAIFDESAK----------------KDDEVFRTAVGDLNQNEEILQTEKITFSVTFVDGNNPFQAVQE----A 62 (429)
24638 T ss_dssp -CCCEEEEEEEETTCH----------------HHHHHHHHHHHHHHHCTTSSTTCCEEEEEEEECTTCHHHHHHH----H
24639 T ss_pred CCceeeeEEEeeCCCh----------------hHHHHHHHHHHHHHhCCCccCCCeEEEEEEecCCCCHHHHHHH----H
24640 Confidence 4578999999998752 4668999999999998777778899999888 66654433332 3
24641
24642
24643 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELS--------DNTRYDFF 192 (908)
24644 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~--------~~~~~~~~ 192 (908)
24645 .+++. ++++++||+.++..+..++.++...+||+|++.+.++.+. ....++++
24646 T Consensus 63 ~~l~~-------------------~~v~avig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (429)
24647 T 5KC8_A 63 CELMN-------------------QGILALVSSIGCTSAGSLQSLADAMHIPHLFIQRSTAGTPRSGCGLTRSNRNDDYT 123 (429)
24648 T ss_dssp HHHHH-------------------HCCSCEEEEECHHHHHHHHHHHHHHTCCEEEEECCSTTCCCCCCCCCCCCSSCCCE
24649 T ss_pred HHHHh-------------------cCceEEEcCCChHHHHHHHHHHHhcCCCEEEeecCCCCCCCCcCCccccCCCCcce
24650 Confidence 33322 4788999998887777788888999999999877654211 11246889
24651
24652
24653 Q NP_000836.2 193 SRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIP------REPRPGEFEKII 266 (908)
24654 Q Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~------~~~~~~~~~~~~ 266 (908)
24655 +++.|+. .+++++++++++++|++|++++.+ +++....+.+.+.+++. ++++......+ ......++...+
24656 T Consensus 124 ~~~~p~~-~~~~a~~~~l~~~~~~~v~ii~~~-~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l 200 (429)
24657 T 5KC8_A 124 LSVRPPV-YLHDVILRVVTEYAWQKFIIFYDS-EYDIRGIQEFLDKVSQQ-GMDVALQKVENNINKMITTLFDTMRIEEL 200 (429)
24658 T ss_dssp EECSCCC-CHHHHHHHHHHHTTCCEEEEEECT-TCCGGGGHHHHHHHHHT-TCEEEEEECCSCHHHHHHHHHHHCCHHHH
24659 T ss_pred eecCCCh-hHHHHHHHHHHHcCCCEEEEEeCC-hHHHHHHHHHHHHHHhc-CceEEEEeecccccccchhhhhhhHHHHH
24660 Confidence 9999987 788899999988999999999975 67777777788777665 35554321110 001123455666
24661
24662
24663 Q NP_000836.2 267 KRLLETPNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYF 345 (908)
24664 Q Consensus 267 ~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (908)
24665 ++++. .+ +.|++......+..+++++++.|+.. .+.|+..+.+...............+...+....
24666 T Consensus 201 ~~~~~-~~-~~vv~~~~~~~~~~~l~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 268 (429)
24667 T 5KC8_A 201 NRYRD-TL-RRAILVMNPATAKSFITEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTF---------- 268 (429)
24668 T ss_dssp HHHHH-HT-TEEEEESCHHHHHHHHHHHHHTTSSCTTCEEEEECSCCCHHHHHHHHHHCCSEEEEEEEEC----------
24669 T ss_pred HHHhh-cC-CEEEEEcCHHHHHHHHHHHHHcCCCcCCeEEEEecCCccccchHHHHHHHhcceEEEEeec----------
24670 Confidence 66653 34 44445555667788999999888764 4567766533221110000000111111111000
24671
24672
24673 Q NP_000836.2 346 RSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP 425 (908)
24674 Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~ 425 (908)
24675 .. .......+|.+.+++.+.. |...... ...+..++..+|||++++++|++++....+.
24676 T Consensus 269 ~~---~~~~~~~~f~~~~~~~~~~--------------~~~~~~~----~~~~~~~~~~~yDav~~~~~al~~~~~~~~~ 327 (429)
24677 T 5KC8_A 269 PV---PQNISQRCFRGNHRISSTL--------------CDPKDPF----AQNMEISNLYIYDTVLLLANAFHKKLEDRKW 327 (429)
24678 T ss_dssp CC---CCSHHHHSEETTEECCHHH--------------HCTTSHH----HHTCCHHHHHHHHHHHHHHHHHHHHHHTTCC
24679 T ss_pred CC---ChhhchhhHhhcccccccC--------------CCCCCcc----ccccChHHHHHHHHHHHHHHHHHHHHHcccc
24680 Confidence 00 0000111122222222110 0000000 0123456788999999999999988754321
24681
24682
24683 Q NP_000836.2 426 G--YIGLCPRM---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITN-KSTEYKVIGHWTNQL 495 (908)
24684 Q Consensus 426 ~--~~~~~~~~---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~-~~~~~~~Vg~~~~~~ 495 (908)
24685 . ....|... ...++..+.+.|++..|.|.+| ++.|+++|++. ..+.|++++... .++.++.||.|+...
24686 T Consensus 328 ~~~~~~~c~~~~~~~~~~~~~l~~~l~~~~f~G~~G-~i~f~~~g~~~~~~~~i~~~~~~~~~~~~~~~vg~w~~~~ 403 (429)
24687 T 5KC8_A 328 HSMASLSCIRKNSKPWQGGRSMLETIKKGGVSGLTG-ELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVT 403 (429)
24688 T ss_dssp CCCCCCCSSSTTCCCCTTHHHHHHHHHTCEEEETTE-EEECCTTSBCCCCEEEEEEC--------CCEEEEEEETTT
24689 T ss_pred cCCCCCccccccCCccccHHHHHHHHHhCceeecce-eEEeCCCCCcCcceEEEEeeecccccCCCeEEEEEEeCCC
24690 Confidence 0 01122211 0114556778888889999999 89999999886 577888887310 124689999998753
24691
24692
24693 No 48
24694 >3OM0_A Glutamate receptor, ionotropic kainate 5; Membrane Protein, Ion channel; HET: BMA, GOL, NAG; 1.401A {Rattus norvegicus}
24695 Probab=99.62 E-value=2.1e-20 Score=201.91 Aligned_cols=370 Identities=15% Similarity=0.164 Sum_probs=229.1 Template_Neff=12.200
24696
24697 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
24698 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
24699 .++++||+++|.++. .+.....|+++|++++|+++++++|+++++++.|++++... .+.+.+++
24700 T Consensus 2 ~~~i~ig~~~~~~~~-------------~g~~~~~~~~~a~~~~n~~~~~~~~~~l~~~~~d~~~~~~~---~~~~~~~~ 65 (393)
24701 T 3OM0_A 2 LSSLRMAAILDDQTV-------------CGRGERLALALAREQINGIIEVPAKARVEVDIFELQRDSQY---ETTDTMCQ 65 (393)
24702 T ss_dssp CCEEEEEEEECCCCS-------------SCCCHHHHHHHHHHHHHHSCCSSCCCEEEEEEEECCSSCHH---HHHHHHHH
24703 T ss_pred CccceeeeeecCCCC-------------CcHHHHHHHHHHHHHHHccCCCCCCCEEEEEEEEcCCCChH---HHHHHHHH
24704 Confidence 468999999998763 45678899999999999988777788999999887654321 12222333
24705
24706
24707 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASS-VSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
24708 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~-~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
24709 +.. ++++++||+.++. ....++.++...++|+|++.+.++.+... .+++++++.|++..
24710 T Consensus 66 l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 125 (393)
24711 T 3OM0_A 66 ILP-------------------KGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQY-LRFASVSLYPSNED 125 (393)
24712 T ss_dssp HGG-------------------GCCSCEECCSSCHHHHHHHHHHHHHHTCCEEECSCCCCC-----CCSCCEESSCCHHH
24713 T ss_pred hcc-------------------cCceEEECCCCCHHhHHHHHHHHhhcCCCEEEecCCCCccccc-ceeeEEEcCCCHHH
24714 Confidence 322 5789999998875 56777888899999999988765544322 35678899999888
24715
24716
24717 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
24718 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
24719 .+.++++++++++|+++++++.+++++....+ +.+.+++. +..+ ....+. ...++...+++++. .++++|++.
24720 T Consensus 126 ~~~~l~~~l~~~~~~~v~ii~~~~~~~~~~~~-~~~~~~~~-~~~~-~~~~~~---~~~~~~~~~~~l~~-~~~~~i~~~ 198 (393)
24721 T 3OM0_A 126 VSLAVSRILKSFNYPSASLICAKAECLLRLEE-LVRGFLIS-KETL-SVRMLD---DSRDPTPLLKEIRD-DKVSTIIID 198 (393)
24722 T ss_dssp HHHHHHHHHHHTTSCCEEEEESSTTHHHHTHH-HHHHHHHS-SSCE-EEEECC----CCCSHHHHHHHHH-HTCSEEEEE
24723 T ss_pred HHHHHHHHHHHcCCCeEEEEEechhHHHHHHH-HHHhhccC-CCee-EEEecC---CCCCcHHHHHHHhc-CCCcEEEEE
24724 Confidence 89999999988899999999977766654444 44444432 2111 111111 22345566777763 578999888
24725
24726
24727 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
24728 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
24729 ........+++++++.|+.. .+.|+..+........ ........+...+... . ...+....|.
24730 T Consensus 199 ~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~----~~~~~~~~f~ 262 (393)
24731 T 3OM0_A 199 ANASISHLVLRKASELGMTSAFYKYILTTMDFPILHL-DGIVEDSSNILGFSMF-----------N----TSHPFYPEFV 262 (393)
24732 T ss_dssp SCHHHHHHHHHHHHHTTTTSTTCEEEECCTTGGGCCC-TTTCCSSCSEEEEECC-----------C----TTSTTHHHHH
24733 T ss_pred CCHHHHHHHHHHHHHcCCCCCCceEEEcCCCcccCCH-HHhcccCceEEEEEEe-----------c----CCCccHHHHH
24734 Confidence 77777888999998888753 3456654321111000 0001111111111100 0 0011111222
24735
24736
24737 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG-YIGLCPRMS-TID 438 (908)
24738 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~-~~~~~~~~~-~~~ 438 (908)
24739 +.+.+.+.. .|... ....+..++..+|||+++++++++++....+.. ....|.... ..+
24740 T Consensus 263 ~~~~~~~~~-------------~~~~~------~~~~~~~~~~~~yda~~~~~~a~~~~~~~~~~~~~~~~c~~~~~~~~ 323 (393)
24741 T 3OM0_A 263 RSLNMSWRE-------------NCEAS------TYPGPALSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPH 323 (393)
24742 T ss_dssp HHHHHHHTT-------------TSCGG------GCCSCCHHHHHHHHHHHHHHHHHHHHTTTSCCCCCCCCTTCCCCCTT
24743 T ss_pred HHHHHhchh-------------ccccC------CCCCCChhHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcccchh
24744 Confidence 222222211 01000 001234567789999999999999986532110 112232111 124
24745
24746
24747 Q NP_000836.2 439 GKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQL 495 (908)
24748 Q Consensus 439 ~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~~ 495 (908)
24749 +..+.+.|++..|.|.+| ++.||++|++.. .+.+++++ .+.+..||.|....
24750 T Consensus 324 ~~~l~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~i~~~~----~~~~~~vg~w~~~~ 376 (393)
24751 T 3OM0_A 324 GTSLMNYLRMVEYDGLTG-RVEFNSKGQRTNYTLRILEKS----RQGHREIGVWYSNR 376 (393)
24752 T ss_dssp HHHHHHHHTTCCEEETTE-EECBCTTSCBCSCEEEEEEEE----TTEEEEEEEEECC-
24753 T ss_pred HHHHHHHHhcCccccccc-eeeeCCCCCcCceEEEEEEec----ccceEEEEEEecCC
24754 Confidence 556778888889999988 899999998875 77787776 25688999998764
24755
24756
24757 No 49
24758 >3QLU_B Glutamate receptor, ionotropic kainate 5; Membrane protein, Glycosylation; HET: NAG, GOL; 2.906A {Rattus norvegicus}
24759 Probab=99.62 E-value=2.1e-20 Score=201.91 Aligned_cols=370 Identities=15% Similarity=0.164 Sum_probs=231.0 Template_Neff=12.200
24760
24761 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
24762 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
24763 .++++||+++|.++. .+.....|+++|++++|+++++++|+++++++.|++++... .+.+.+++
24764 T Consensus 2 ~~~i~ig~~~~~~~~-------------~g~~~~~~~~~a~~~~n~~~~~~~~~~l~~~~~d~~~~~~~---~~~~~~~~ 65 (393)
24765 T 3QLU_B 2 LSSLRMAAILDDQTV-------------CGRGERLALALAREQINGIIEVPAKARVEVDIFELQRDSQY---ETTDTMCQ 65 (393)
24766 T ss_dssp CCCEEEEEEECCCSS-------------SCCSHHHHHHHHHHHHHHSCCSSCCCCEEEEEEECSSSCHH---HHHHHHHH
24767 T ss_pred CccceeeeeecCCCC-------------CcHHHHHHHHHHHHHHHccCCCCCCCEEEEEEEEcCCCChH---HHHHHHHH
24768 Confidence 468999999998763 45678899999999999988777788999999887654321 12222333
24769
24770
24771 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASS-VSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
24772 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~-~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
24773 +.. ++++++||+.++. ....++.++...++|+|++.+.++.+... .+++++++.|++..
24774 T Consensus 66 l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 125 (393)
24775 T 3QLU_B 66 ILP-------------------KGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQY-LRFASVSLYPSNED 125 (393)
24776 T ss_dssp HGG-------------------GCCSCEECCSSCHHHHHHHHHHHHHHTCCEEECSCCSCCCCTT-SCCCEEESSCCHHH
24777 T ss_pred hcc-------------------cCceEEECCCCCHHhHHHHHHHHhhcCCCEEEecCCCCccccc-ceeeEEEcCCCHHH
24778 Confidence 322 5789999998875 56777888899999999988765544322 35678899999888
24779
24780
24781 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
24782 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
24783 .+.++++++++++|+++++++.+++++....+ +.+.+++. +..+ ....+. ...++...+++++. .++++|++.
24784 T Consensus 126 ~~~~l~~~l~~~~~~~v~ii~~~~~~~~~~~~-~~~~~~~~-~~~~-~~~~~~---~~~~~~~~~~~l~~-~~~~~i~~~ 198 (393)
24785 T 3QLU_B 126 VSLAVSRILKSFNYPSASLICAKAECLLRLEE-LVRGFLIS-KETL-SVRMLD---DSRDPTPLLKEIRD-DKVSTIIID 198 (393)
24786 T ss_dssp HHHHHHHHHHHTTSCCEEEEESSTTHHHHTHH-HHTTSCBB-TTTE-EEEECC---SSCCCHHHHHHHHH-TTCCEEEEE
24787 T ss_pred HHHHHHHHHHHcCCCeEEEEEechhHHHHHHH-HHHhhccC-CCee-EEEecC---CCCCcHHHHHHHhc-CCCcEEEEE
24788 Confidence 89999999988899999999977766654444 44444432 2111 111111 22345566777763 578999888
24789
24790
24791 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
24792 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
24793 ........+++++++.|+.. .+.|+..+........ ........+...+... . ...+....|.
24794 T Consensus 199 ~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~----~~~~~~~~f~ 262 (393)
24795 T 3QLU_B 199 ANASISHLVLRKASELGMTSAFYKYILTTMDFPILHL-DGIVEDSSNILGFSMF-----------N----TSHPFYPEFV 262 (393)
24796 T ss_dssp SCHHHHHHHHHHHHHTTTTSSSCEEEECCSCCTTCCC-TTTCCSSCEEEEEECC-----------C----TTSTTHHHHH
24797 T ss_pred CCHHHHHHHHHHHHHcCCCCCCceEEEcCCCcccCCH-HHhcccCceEEEEEEe-----------c----CCCccHHHHH
24798 Confidence 77777888999998888753 3456654321111000 0001111111111100 0 0011111222
24799
24800
24801 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG-YIGLCPRMS-TID 438 (908)
24802 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~-~~~~~~~~~-~~~ 438 (908)
24803 +.+.+.+.. .|... ....+..++..+|||+++++++++++....+.. ....|.... ..+
24804 T Consensus 263 ~~~~~~~~~-------------~~~~~------~~~~~~~~~~~~yda~~~~~~a~~~~~~~~~~~~~~~~c~~~~~~~~ 323 (393)
24805 T 3QLU_B 263 RSLNMSWRE-------------NCEAS------TYPGPALSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPH 323 (393)
24806 T ss_dssp HHHHHHHHH-------------HCSSS------CCCCCCHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCTTSCCCCTT
24807 T ss_pred HHHHHhchh-------------ccccC------CCCCCChhHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcccchh
24808 Confidence 222222211 01000 001234567789999999999999986532110 112232111 124
24809
24810
24811 Q NP_000836.2 439 GKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQL 495 (908)
24812 Q Consensus 439 ~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~~ 495 (908)
24813 +..+.+.|++..|.|.+| ++.||++|++.. .+.+++++ .+.+..||.|....
24814 T Consensus 324 ~~~l~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~i~~~~----~~~~~~vg~w~~~~ 376 (393)
24815 T 3QLU_B 324 GTSLMNYLRMVEYDGLTG-RVEFNSKGQRTNYTLRILEKS----RQGHREIGVWYSNR 376 (393)
24816 T ss_dssp HHHHHHHHHTCCEEETTE-EECBCTTSCBCSCEEEEEECC----SSSCCEEEEEESSS
24817 T ss_pred HHHHHHHHhcCccccccc-eeeeCCCCCcCceEEEEEEec----ccceEEEEEEecCC
24818 Confidence 556778888889999988 899999998875 77787776 25688999998764
24819
24820
24821 No 50
24822 >5FWY_B GLUTAMATE RECEPTOR 2, GLUTAMATE RECEPTOR; TRANSPORT PROTEIN; HET: SO4, NAG; 2.12A {RATTUS NORVEGICUS}
24823 Probab=99.62 E-value=2.4e-20 Score=201.38 Aligned_cols=372 Identities=13% Similarity=0.153 Sum_probs=227.7 Template_Neff=11.900
24824
24825 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDL-LSNITLGVRILD-TCSRDTYALEQSLTFV 120 (908)
24826 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~i-l~g~~l~~~~~d-~~~~~~~a~~~~~~~~ 120 (908)
24827 +++++||+++|.++. ....|++.|++++|+++++ ++|+++++++.| +.+++.. ..+.+
24828 T Consensus 3 ~~~i~Ig~~~~~~~~----------------~~~~~~~~a~~~~n~~g~~~~~g~~l~~~~~d~~~~~~~~----~~~~~ 62 (390)
24829 T 5FWY_B 3 PNTISIGGLFMRNTV----------------QEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFS----VTNAF 62 (390)
24830 T ss_dssp CSEEEEEEEECTTCH----------------HHHHHHHHHHHHHHTCCCTTTCSSEEEEEEEECSSCCHHH----HHHHH
24831 T ss_pred CceeEEEEeecCCCH----------------HHHHHHHHHHHHHHcCCCCCCCCceEEEEEEecCCCChHH----HHHHH
24832 Confidence 568999999998752 4668999999999998765 357888888876 4444332 22233
24833
24834
24835 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
24836 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
24837 .+++. +++++++|+.++..+..++..+...++|+|++..... ..+++++++.|+
24838 T Consensus 63 ~~l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~-----~~~~~~~~~~p~-- 116 (390)
24839 T 5FWY_B 63 CSQFS-------------------RGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTD-----ADVQFVIQMRPA-- 116 (390)
24840 T ss_dssp HHHHH-------------------HCCSCEEECCCTTTHHHHHHHHHHHTCCEEECSCCCS-----SCCSSEEECSCC--
24841 T ss_pred HHHhh-------------------CCeeEEEcCCCchhHHHHHHHHHhcCCceeeCCCCCC-----CCCCcEEEeecc--
24842 Confidence 33322 5788999998887777788888999999998775432 246788998887
24843
24844
24845 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
24846 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
24847 +++++++++++++|+++++++++ .++....+.+++.+++. ++++......+. .+..++...+++++. .++++|++
24848 T Consensus 117 -~~~~~~~~~~~~~~~~v~vl~~~-~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~-~~~~~~~~~~~~l~~-~~~~~vv~ 191 (390)
24849 T 5FWY_B 117 -LKGAILSLLSYYKWEKFVYLYDT-ERGFSVLQAIMEAAVQN-NWQVTARSVGNI-KDVQEFRRIIEEMDR-RQEKRYLI 191 (390)
24850 T ss_dssp -CHHHHHHHHHHTTCCEEEEEECS-TTCSHHHHHHHHHHHHH-TCEEEEEECTTC-CSHHHHHHHHHHHHH-TTCCEEEE
24851 T ss_pred -HHHHHHHHHHHcCCcEEEEEEeC-cccHHHHHHHHHHHHhC-CCeEEEEEeCCC-CCHHHHHHHHHHHhh-cCCcEEEE
24852 Confidence 46788888888899999999954 67777777777777664 345433211110 122456667777763 57898888
24853
24854
24855 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
24856 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
24857 ......+..+++++++.|+.. .+.|+..+.+...... ........+...+.... ...+....|
24858 T Consensus 192 ~~~~~~~~~~l~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~f 255 (390)
24859 T 5FWY_B 192 DCEVERINTILEQVVILGKHSRGYHYMLANLGFTDILL-ERVMHGGANITGFQIVN---------------NENPMVQQF 255 (390)
24860 T ss_dssp ESCHHHHHHHHHHHHHTTCCSTTCEEEECCTTGGGSCC-HHHHHHTCEEEEEESCC---------------TTSHHHHHH
24861 T ss_pred ECCHHHHHHHHHHHHHhCCccCCeeEEEecCCcchhcH-HHHhcCCccEEEEEEec---------------CCCHHHHHH
24862 Confidence 776677788899998888753 3556665433221100 00001111111111000 001111223
24863
24864
24865 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP----GYIGLCPRM- 434 (908)
24866 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~----~~~~~~~~~- 434 (908)
24867 .+.+++.+...... .+ ...+..++..+||+++++++|++++...... .....|...
24868 T Consensus 256 ~~~~~~~~~~~~~~---------~~----------~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~~~c~~~~ 316 (390)
24869 T 5FWY_B 256 IQRWVRLDEREFPE---------AK----------NAPLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANP 316 (390)
24870 T ss_dssp HHHHTTSCTTTSTT---------CT----------TSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSSCCSCTTCSS
24871 T ss_pred HHHHHhcCcccCCC---------CC----------CCCCChHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCcccCCC
24872 Confidence 23232222110000 00 0123456778999999999999988653210 001122110
24873
24874
24875 Q NP_000836.2 435 --STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWA 505 (908)
24876 Q Consensus 435 --~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~ 505 (908)
24877 ...++..+.+.|++..|.|.+| ++.||++|++. ..+.+++++. +.++.+|.|.....++.....|+
24878 T Consensus 317 ~~~~~~~~~l~~~l~~~~~~g~~G-~i~f~~~g~~~~~~~~i~~~~~----~~~~~vg~w~~~~~~~~~~~~~~ 385 (390)
24879 T 5FWY_B 317 AVPWSQGIDIERALKMVQVQGMTG-NIQFDTYGRRTNYTIDVYEMKV----SGSRKAGYWNEYERFVPFSGTKH 385 (390)
24880 T ss_dssp CCCCTTHHHHHHHHHTCCEEETTE-EEEECTTSCEESCCEEEEEEC------CEEEEEEEETTTEEEECCC---
24881 T ss_pred CCcchhHHHHHHHHhcCCccCCCc-eEEECCCCceeeeEEEEEEeee----cCcEEEEEEcCCCccccCCCCCC
24882 Confidence 0114556778888889999998 89999988886 4778888762 46889999987654444445564
24883
24884
24885 No 51
24886 >6FPJ_A Glutamate receptor 3; ligand-gated ion channel, membrane protein; HET: DMS, NAG, PO4; 1.96A {Rattus norvegicus}
24887 Probab=99.62 E-value=2.4e-20 Score=201.38 Aligned_cols=372 Identities=13% Similarity=0.153 Sum_probs=227.2 Template_Neff=11.900
24888
24889 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDL-LSNITLGVRILD-TCSRDTYALEQSLTFV 120 (908)
24890 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~i-l~g~~l~~~~~d-~~~~~~~a~~~~~~~~ 120 (908)
24891 +++++||+++|.++. ....|++.|++++|+++++ ++|+++++++.| +.+++.. ..+.+
24892 T Consensus 3 ~~~i~Ig~~~~~~~~----------------~~~~~~~~a~~~~n~~g~~~~~g~~l~~~~~d~~~~~~~~----~~~~~ 62 (390)
24893 T 6FPJ_A 3 PNTISIGGLFMRNTV----------------QEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFS----VTNAF 62 (390)
24894 T ss_dssp CSEEEEEEEEETTCH----------------HHHHHHHHHHHHHHTCCCTTTCSSEEEEEEEEESCSSHHH----HHHHH
24895 T ss_pred CceeEEEEeecCCCH----------------HHHHHHHHHHHHHHcCCCCCCCCceEEEEEEecCCCChHH----HHHHH
24896 Confidence 568999999998752 4668999999999998765 357888888876 4444332 22233
24897
24898
24899 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
24900 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
24901 .+++. +++++++|+.++..+..++..+...++|+|++..... ..+++++++.|+
24902 T Consensus 63 ~~l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~-----~~~~~~~~~~p~-- 116 (390)
24903 T 6FPJ_A 63 CSQFS-------------------RGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTD-----ADVQFVIQMRPA-- 116 (390)
24904 T ss_dssp HHHHH-------------------HCCSCEEECCCTTTHHHHHHHHHHTTCCEEECSCCCS-----SCCSSEEECSCC--
24905 T ss_pred HHHhh-------------------CCeeEEEcCCCchhHHHHHHHHHhcCCceeeCCCCCC-----CCCCcEEEeecc--
24906 Confidence 33322 5788999998887777788888999999998775432 246788998887
24907
24908
24909 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
24910 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
24911 +++++++++++++|+++++++++ .++....+.+++.+++. ++++......+. .+..++...+++++. .++++|++
24912 T Consensus 117 -~~~~~~~~~~~~~~~~v~vl~~~-~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~-~~~~~~~~~~~~l~~-~~~~~vv~ 191 (390)
24913 T 6FPJ_A 117 -LKGAILSLLSYYKWEKFVYLYDT-ERGFSVLQAIMEAAVQN-NWQVTARSVGNI-KDVQEFRRIIEEMDR-RQEKRYLI 191 (390)
24914 T ss_dssp -CHHHHHHHHHHTTCCEEEEEECS-TTCSHHHHHHHHHHHHH-TCEEEEEECTTC-CSHHHHHHHHHHHHH-TTCCEEEE
24915 T ss_pred -HHHHHHHHHHHcCCcEEEEEEeC-cccHHHHHHHHHHHHhC-CCeEEEEEeCCC-CCHHHHHHHHHHHhh-cCCcEEEE
24916 Confidence 46788888888899999999954 67777777777777664 345433211110 122456667777763 57898888
24917
24918
24919 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
24920 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
24921 ......+..+++++++.|+.. .+.|+..+.+...... ........+...+.... ...+....|
24922 T Consensus 192 ~~~~~~~~~~l~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~f 255 (390)
24923 T 6FPJ_A 192 DCEVERINTILEQVVILGKHSRGYHYMLANLGFTDILL-ERVMHGGANITGFQIVN---------------NENPMVQQF 255 (390)
24924 T ss_dssp ESCHHHHHHHHHHHHHHCSSSTTCEEEECCTTGGGCCC-HHHHHTTCEEEEEESCC---------------TTSHHHHHH
24925 T ss_pred ECCHHHHHHHHHHHHHhCCccCCeeEEEecCCcchhcH-HHHhcCCccEEEEEEec---------------CCCHHHHHH
24926 Confidence 776677788899998888753 3556665433221100 00001111111111000 001111223
24927
24928
24929 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP----GYIGLCPRM- 434 (908)
24930 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~----~~~~~~~~~- 434 (908)
24931 .+.+++.+...... .+ ...+..++..+||+++++++|++++...... .....|...
24932 T Consensus 256 ~~~~~~~~~~~~~~---------~~----------~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~~~c~~~~ 316 (390)
24933 T 6FPJ_A 256 IQRWVRLDEREFPE---------AK----------NAPLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANP 316 (390)
24934 T ss_dssp HHHHTTSCTTTSTT---------SS----------SSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC-----CCC--
24935 T ss_pred HHHHHhcCcccCCC---------CC----------CCCCChHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCcccCCC
24936 Confidence 23232222110000 00 0123456778999999999999988653210 001122110
24937
24938
24939 Q NP_000836.2 435 --STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWA 505 (908)
24940 Q Consensus 435 --~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~ 505 (908)
24941 ...++..+.+.|++..|.|.+| ++.||++|++. ..+.+++++. +.++.+|.|.....++.....|+
24942 T Consensus 317 ~~~~~~~~~l~~~l~~~~~~g~~G-~i~f~~~g~~~~~~~~i~~~~~----~~~~~vg~w~~~~~~~~~~~~~~ 385 (390)
24943 T 6FPJ_A 317 AVPWSQGIDIERALKMVQVQGMTG-NIQFDTYGRRTNYTIDVYEMKV----SGSRKAGYWNEYERFVPFSGTKH 385 (390)
24944 T ss_dssp CCCCTTHHHHHHHHHTCCEEETTE-EEEECTTSBEESCCEEEEEEET----TEEEEEEEEETTTEEEECC----
24945 T ss_pred CCcchhHHHHHHHHhcCCccCCCc-eEEECCCCceeeeEEEEEEeee----cCcEEEEEEcCCCccccCCCCCC
24946 Confidence 0114556778888889999998 89999988886 4778888762 46889999987654444445564
24947
24948
24949 No 52
24950 >3H5L_A putative Branched-chain amino acid ABC; STRUCTURAL GENOMICS, TRANSPORTER, PSI-2, Protein; 1.7A {Ruegeria pomeroyi}
24951 Probab=99.61 E-value=2.8e-20 Score=202.99 Aligned_cols=363 Identities=13% Similarity=0.140 Sum_probs=230.2 Template_Neff=11.400
24952
24953 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRD-TYALEQSLT 118 (908)
24954 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~-~~a~~~~~~ 118 (908)
24955 ....++++||++.|.++... ..+.....|++.|++++|+++++. |+++++.+.|+++++ .. +.+
24956 T Consensus 9 ~~~~~~i~Ig~i~~~~~~~~----------~~~~~~~~~~~~a~~~~n~~g~~~-g~~i~~~~~d~~~~~~~~----~~~ 73 (419)
24957 T 3H5L_A 9 AQSSDPVVIGCPAPLTGIVA----------ADGIEFQRGIQMAADEINAVGGIL-GRPIELVFADTQSKGVDV----VIQ 73 (419)
24958 T ss_dssp ----CCEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHHHTTTSBT-TBCEEEEEEECTTCCHHH----HHH
24959 T ss_pred cCCCCCEEEEEeecCCCCch----------hccHHHHHHHHHHHHHHHHcCCcC-CcceEEEEEeCCCCCHHH----HHH
24960 Confidence 45678999999999876431 245678899999999999987654 788999888877653 22 233
24961
24962
24963 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTA--PELS--DNTRYDFFSR 194 (908)
24964 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~--~~l~--~~~~~~~~~~ 194 (908)
24965 .+++++. .++++++||+.++.....++..+.+.++|+|++.... +.+. +...++++++
24966 T Consensus 74 ~~~~l~~------------------~~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~ 135 (419)
24967 T 3H5L_A 74 SAQRLID------------------RDNASALIAGYNLENGTALHDVAADAGVIAMHANTVAVHDEMVKSDPDRYWGTFQ 135 (419)
24968 T ss_dssp HHHHHHH------------------TTCCSEEECSCCSSCSCHHHHHHHHHTCEEEECCCCHHHHHHHHHCTTTCTTEEE
24969 T ss_pred HHHHHHH------------------hcCCCEEEecccccchHHHHHHHHHcCCcEEeCCCchhcHHHHhcCccccCceee
24970 Confidence 3343332 1578999999888777788888899999999876422 2222 1123567889
24971
24972
24973 Q NP_000836.2 195 VVPPDSYQAQAMVDIVTA--------LGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKII 266 (908)
24974 Q Consensus 195 ~~~~~~~~~~~~~~~l~~--------~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~ 266 (908)
24975 +.++....+.++++++.+ .+|+++++++.++.++....+.+++.+++. ++++.....+. ....++...+
24976 T Consensus 136 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~~~~~~~~~~ 212 (419)
24977 T 3H5L_A 136 YDPPETLYGGGFLKFLKDIEDNGEFSRPNNKIAIITGPGIYSVNIANAIRDGAGEY-GYDVSLFETVA--IPVSDWGPTL 212 (419)
24978 T ss_dssp SSCCTHHHHHHHHHHHHHHHHTTSCCCSSSEEEEEECSSHHHHHHHHHHHHHGGGG-TCEEEEEEECC--SSCSCCHHHH
24979 T ss_pred cCCChhHhHHHHHHHHHHHHhCCCCCCCCCeEEEEECCCHHHHHHHHHHHHHHHHc-CCEEEEEEeeC--CCCCCcHHHH
24980 Confidence 999888888888888866 689999999977777888888888888765 45554332222 2234566677
24981
24982
24983 Q NP_000836.2 267 KRLLETPNARAVIMFA-NEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYF 345 (908)
24984 Q Consensus 267 ~~l~~~~~~~viv~~~-~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (908)
24985 ++++. .++++|++.+ .+..+..+++++++.|+.. .|++...+...... ........+.+.... +
24986 T Consensus 213 ~~i~~-~~~~vv~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~-----------~ 277 (419)
24987 T 3H5L_A 213 AKLRA-DPPAVIVVTHFYPQDQALFMNQFMTDPTNS--LVYLQYGASLAAFR-DIAGDNSVGVTYATV-----------L 277 (419)
24988 T ss_dssp HHHHH-SCCSEEEECCCCHHHHHHHHHHHTTSCCSC--EEEECSGGGSHHHH-HHHGGGGTTCEEEES-----------S
24989 T ss_pred HHHHh-CCCCEEEEEeCChHHHHHHHHHHhhCCcCc--EEEEechhhhHHHH-HHHcccceeeEEEec-----------c
24990 Confidence 77764 5788888775 4566778889988887742 34443322211100 000111222211110 0
24991
24992
24993 Q NP_000836.2 346 RSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP 425 (908)
24994 Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~ 425 (908)
24995 . ....+....|.+.+++.++. .....++..+|||+++++.+++.......
24996 T Consensus 278 ~---~~~~~~~~~f~~~~~~~~~~--------------------------~~~~~~~~~~yda~~~~~~a~~~~~~~~~- 327 (419)
24997 T 3H5L_A 278 G---TLQDEMGDAFAKAYKERYGD--------------------------LSSTASGCQTYSALYAYSIAAALAGGPGA- 327 (419)
24998 T ss_dssp C---CCSSHHHHHHHHHHHHHHCT--------------------------TSCHHHHHHHHHHHHHHHHHHHHTTSCCC-
24999 T ss_pred C---cCCCHHHHHHHHHHHHHHCC--------------------------CCCCcCcchHHHHHHHHHHHHHHcCCCCC-
25000 Confidence 0 00011122233333322211 01123466799999999999876543210
25001
25002
25003 Q NP_000836.2 426 GYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTN 493 (908)
25004 Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~ 493 (908)
25005 + ....++..+.++|++..|.|.+| ++.||++|++...+.+..++.. ...+..|+.|..
25006 T Consensus 328 -----~--~~~~~~~~l~~~l~~~~f~g~~G-~v~f~~~g~~~~~~~~~~~~~~--~~~~~~v~q~~~ 385 (419)
25007 T 3H5L_A 328 -----P--YDDVQNKAVADRLRSLIFRGPVG-TMRFHADTQSAWSYPTETNDPS--LGMPHIFSQIFD 385 (419)
25008 T ss_dssp -----T--TCHHHHHHHHHHHHHCEEEETTE-EEEBCTTTCBBCEETTTCSCTT--SSEECEEEECCC
25009 T ss_pred -----C--CCcccHHHHHHHHHhCCcccCCe-eEEeCCCCcccCCCCCcCCCcc--cccceEEEEeec
25010 Confidence 0 01234567888899889999999 8999999988777777776632 245778888886
25011
25012
25013 No 53
25014 >3H5L_B putative Branched-chain amino acid ABC; STRUCTURAL GENOMICS, TRANSPORTER, PSI-2, Protein; 1.7A {Ruegeria pomeroyi}
25015 Probab=99.61 E-value=2.8e-20 Score=202.99 Aligned_cols=363 Identities=13% Similarity=0.140 Sum_probs=232.5 Template_Neff=11.400
25016
25017 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRD-TYALEQSLT 118 (908)
25018 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~-~~a~~~~~~ 118 (908)
25019 ....++++||++.|.++... ..+.....|++.|++++|+++++. |+++++.+.|+++++ .. +.+
25020 T Consensus 9 ~~~~~~i~Ig~i~~~~~~~~----------~~~~~~~~~~~~a~~~~n~~g~~~-g~~i~~~~~d~~~~~~~~----~~~ 73 (419)
25021 T 3H5L_B 9 AQSSDPVVIGCPAPLTGIVA----------ADGIEFQRGIQMAADEINAVGGIL-GRPIELVFADTQSKGVDV----VIQ 73 (419)
25022 T ss_dssp CCCSSCEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHHHHTTTBT-TBCEEEEEEECTTCCHHH----HHH
25023 T ss_pred cCCCCCEEEEEeecCCCCch----------hccHHHHHHHHHHHHHHHHcCCcC-CcceEEEEEeCCCCCHHH----HHH
25024 Confidence 45678999999999876431 245678899999999999987654 788999888877653 22 233
25025
25026
25027 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTA--PELS--DNTRYDFFSR 194 (908)
25028 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~--~~l~--~~~~~~~~~~ 194 (908)
25029 .+++++. .++++++||+.++.....++..+.+.++|+|++.... +.+. +...++++++
25030 T Consensus 74 ~~~~l~~------------------~~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~ 135 (419)
25031 T 3H5L_B 74 SAQRLID------------------RDNASALIAGYNLENGTALHDVAADAGVIAMHANTVAVHDEMVKSDPDRYWGTFQ 135 (419)
25032 T ss_dssp HHHHHHH------------------TTCCSEEECSCCSSCSCHHHHHHHHHTCEEEECCCCHHHHHHHHHCTTTCTTEEE
25033 T ss_pred HHHHHHH------------------hcCCCEEEecccccchHHHHHHHHHcCCcEEeCCCchhcHHHHhcCccccCceee
25034 Confidence 3343332 1578999999888777788888899999999876422 2222 1123567889
25035
25036
25037 Q NP_000836.2 195 VVPPDSYQAQAMVDIVTA--------LGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKII 266 (908)
25038 Q Consensus 195 ~~~~~~~~~~~~~~~l~~--------~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~ 266 (908)
25039 +.++....+.++++++.+ .+|+++++++.++.++....+.+++.+++. ++++.....+. ....++...+
25040 T Consensus 136 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~~~~~~~~~~ 212 (419)
25041 T 3H5L_B 136 YDPPETLYGGGFLKFLKDIEDNGEFSRPNNKIAIITGPGIYSVNIANAIRDGAGEY-GYDVSLFETVA--IPVSDWGPTL 212 (419)
25042 T ss_dssp SSCCTHHHHHHHHHHHHHHHHTTSCCCSSSEEEEEECSSHHHHHHHHHHHHHGGGG-TCEEEEEEECC--SSCSCCHHHH
25043 T ss_pred cCCChhHhHHHHHHHHHHHHhCCCCCCCCCeEEEEECCCHHHHHHHHHHHHHHHHc-CCEEEEEEeeC--CCCCCcHHHH
25044 Confidence 999888888888888866 689999999977777888888888888765 45554332222 2234566677
25045
25046
25047 Q NP_000836.2 267 KRLLETPNARAVIMFA-NEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYF 345 (908)
25048 Q Consensus 267 ~~l~~~~~~~viv~~~-~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (908)
25049 ++++. .++++|++.+ .+..+..+++++++.|+.. .|++...+...... ........+.+.... +
25050 T Consensus 213 ~~i~~-~~~~vv~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~-----------~ 277 (419)
25051 T 3H5L_B 213 AKLRA-DPPAVIVVTHFYPQDQALFMNQFMTDPTNS--LVYLQYGASLAAFR-DIAGDNSVGVTYATV-----------L 277 (419)
25052 T ss_dssp HHHHH-SCCSEEEECCCCHHHHHHHHHHHTTSCCSC--EEEECSGGGSHHHH-HHHGGGGTTCEEEES-----------S
25053 T ss_pred HHHHh-CCCCEEEEEeCChHHHHHHHHHHhhCCcCc--EEEEechhhhHHHH-HHHcccceeeEEEec-----------c
25054 Confidence 77764 5788888775 4566778889988887742 34443322211100 000111222211110 0
25055
25056
25057 Q NP_000836.2 346 RSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP 425 (908)
25058 Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~ 425 (908)
25059 . ....+....|.+.+++.++. .....++..+|||+++++.+++.......
25060 T Consensus 278 ~---~~~~~~~~~f~~~~~~~~~~--------------------------~~~~~~~~~~yda~~~~~~a~~~~~~~~~- 327 (419)
25061 T 3H5L_B 278 G---TLQDEMGDAFAKAYKERYGD--------------------------LSSTASGCQTYSALYAYSIAAALAGGPGA- 327 (419)
25062 T ss_dssp C---CCSSHHHHHHHHHHHHHHCT--------------------------TSCHHHHHHHHHHHHHHHHHHHHTTSCCC-
25063 T ss_pred C---cCCCHHHHHHHHHHHHHHCC--------------------------CCCCcCcchHHHHHHHHHHHHHHcCCCCC-
25064 Confidence 0 00011122233333322211 01123466799999999999876543210
25065
25066
25067 Q NP_000836.2 426 GYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTN 493 (908)
25068 Q Consensus 426 ~~~~~~~~~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~ 493 (908)
25069 + ....++..+.++|++..|.|.+| ++.||++|++...+.+..++.. ...+..|+.|..
25070 T Consensus 328 -----~--~~~~~~~~l~~~l~~~~f~g~~G-~v~f~~~g~~~~~~~~~~~~~~--~~~~~~v~q~~~ 385 (419)
25071 T 3H5L_B 328 -----P--YDDVQNKAVADRLRSLIFRGPVG-TMRFHADTQSAWSYPTETNDPS--LGMPHIFSQIFD 385 (419)
25072 T ss_dssp -----T--TCHHHHHHHHHHHHHCEEEETTE-EEEBCTTTCBBCEETTTCSCTT--SSEECEEEECSC
25073 T ss_pred -----C--CCcccHHHHHHHHHhCCcccCCe-eEEeCCCCcccCCCCCcCCCcc--cccceEEEEeec
25074 Confidence 0 01234567888899889999999 8999999988777777776632 245778888886
25075
25076
25077 No 54
25078 >5KCA_A Cerebellin-1,Cerebellin-1,Cerebellin-1,Glutamate receptor ionotropic, delta-2; Cerebellin, ionotropic glutamate receptor (iGluR); 3.1A {Homo sapiens}
25079 Probab=99.60 E-value=4.6e-20 Score=221.09 Aligned_cols=382 Identities=16% Similarity=0.223 Sum_probs=236.7 Template_Neff=10.400
25080
25081 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRI-LDTCSRDTYALEQSLT 118 (908)
25082 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~-~d~~~~~~~a~~~~~~ 118 (908)
25083 .....+++||+++|.++ .....|+++|++++|+++++++++++++++ .|++.++..+.+
25084 T Consensus 452 ~~~~~~i~IG~i~~~sg----------------~~~~~a~~~A~~~iN~~~~~~~g~~l~~~~~~D~~~~~~~a~~---- 511 (878)
25085 T 5KCA_A 452 GGSDSIIHIGAIFDESA----------------KKDDEVFRTAVGDLNQNEEILQTEKITFSVTFVDGNNPFQAVQ---- 511 (878)
25086 T ss_pred CCCCCCeEEEEEeCCCh----------------HHHHHHHHHHHHHHHhCCCCCCCCeEEEEEEEeCCCCHHHHHH----
25087 Confidence 34467889999998764 246689999999999987777788899888 888776543333
25088
25089
25090 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAP-------ELSDNTRYDF 191 (908)
25091 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~-------~l~~~~~~~~ 191 (908)
25092 .+++++. ++++++||+.++.....++.+++..++|+|++....+ .+++...+++
25093 T Consensus 512 ~~~~l~~-------------------~~v~aviG~~~s~~~~~v~~~~~~~~ip~is~~~~~~~~~~~~~~l~~~~~~~~ 572 (878)
25094 T 5KCA_A 512 EACELMN-------------------QGILALVSSIGCTSAGSLQSLADAMHIPHLFIQRSTAGTPRSGCGLTRSNRNDD 572 (878)
25095 T ss_pred HHHHHHH-------------------cCCCEEECCCCChhHHHHHHHHHHhCCCEEccCCCCCCCCCCCcccCCCCCCCc
25096 Confidence 3333332 4788999998887777888889999999999876554 3443345788
25097
25098
25099 Q NP_000836.2 192 FSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLL- 270 (908)
25100 Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~- 270 (908)
25101 +++..+++..+++++++++++++|+++++++ +++++....+.+++.+++. ++++.....++ ....++...+++++
25102 T Consensus 573 ~~~~~~~~~~~~~al~~~l~~~~w~~v~Iv~-d~~~g~~~~~~~~~~~~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~ 648 (878)
25103 T 5KCA_A 573 YTLSVRPPVYLHDVILRVVTEYAWQKFIIFY-DSEYDIRGIQEFLDKVSQQ-GMDVALQKVEN--NINKMITTLFDTMRI 648 (878)
25104 T ss_pred eeecCCCHHHHHHHHHHHHHHhCCCEEEEEe-cChhhHHHHHHHHHHHHHc-CCEEEEeeecC--CCCCCChHHHHHHHH
25105 Confidence 9999998888899999999889999999777 4567777778888777765 45554332222 11122222222221
25106
25107
25108 Q NP_000836.2 271 ---E--TPNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRY 344 (908)
25109 Q Consensus 271 ---~--~~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (908)
25110 + ..++++|++......+..+++++++.++.. ++.|+..+.+...............+.........
25111 T Consensus 649 ~~l~~~~~~~~vIil~~~~~~~~~~l~~a~~~g~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------- 720 (878)
25112 T 5KCA_A 649 EELNRYRDTLRRAILVMNPATAKSFITEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFP-------- 720 (878)
25113 T ss_pred HHHHhhccCCcEEEEeCCHHHHHHHHHHHHHcCCCCCCcEEEEeccccCCcchhHHHHHhccceeeecCCCC--------
25114 Confidence 0 136788888777777888999999888753 46777765443221100000000111111100000
25115
25116
25117 Q NP_000836.2 345 FRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLC 424 (908)
25118 Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~ 424 (908)
25119 .........+.+.+.+.+. .|...... ...+..++..+|||++++++|++++....+
25120 T Consensus 721 -----~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~----~~~~~~~~~~~yDAv~l~a~al~~~~~~~~ 777 (878)
25121 T 5KCA_A 721 -----VPQNISQRCFRGNHRISST--------------LCDPKDPF----AQNMEISNLYIYDTVLLLANAFHKKLEDRK 777 (878)
25122 T ss_pred -----CCCChhHHhhhhhhccCCC--------------CCCCCCCC----CCCccchHHHHHHHHHHHHHHHHHHHhcCC
25123 Confidence 0000001111111111110 11100000 012345677899999999999999875432
25124
25125
25126 Q NP_000836.2 425 PGY--IGLCPRM---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITN-KSTEYKVIGHWTNQLH 496 (908)
25127 Q Consensus 425 ~~~--~~~~~~~---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~-~~~~~~~Vg~~~~~~~ 496 (908)
25128 ... ...|... ...++..+.+.|++..|.|.+| .+.||++|++. ..+.|++++... +...+++||.|.....
25129 T Consensus 778 ~~~~~~~~c~~~~~~~~~~~~~l~~~l~~~~f~G~~G-~i~fd~~g~r~~~~~~I~~~~~~~~~~~~~~~Vg~w~~~~g 855 (878)
25130 T 5KCA_A 778 WHSMASLSCIRKNSKPWQGGRSMLETIKKGGVSGLTG-ELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 855 (878)
25131 T ss_pred CCCCCCCccCCCCCCCCcCHHHHHHHHhcCeeecCCc-cEEecCCCCcCCCeEEEEEEecCCCCCCceEEEEEEeCCCC
25132 Confidence 110 1122110 1124556788888889999998 89999999964 578888887411 1257899999997643
25133
25134
25135 No 55
25136 >4XFK_A BrovA.17370.a; transport protein, Structural Genomics, Seattle; 1.3A {Brucella ovis}
25137 Probab=99.60 E-value=5.4e-20 Score=199.14 Aligned_cols=355 Identities=14% Similarity=0.144 Sum_probs=229.2 Template_Neff=11.000
25138
25139 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
25140 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
25141 ...++||++.|++++.. ..+..+..|+++|++++|+.+++. |+++++.+.|+++++..+ .+.+++
25142 T Consensus 9 ~~~~~ig~~~plsG~~~----------~~g~~~~~g~~~a~~~iN~~gg~~-g~~i~~~~~d~~~~~~~~----~~~~~~ 73 (399)
25143 T 4XFK_A 9 AEPLKIALVETLSGPQA----------STGLLYRAAVLYQLGKINEAGGFN-GEKIQILEYDNQGGPVGA----ADRVKA 73 (399)
25144 T ss_dssp CCCCEEEEEECCSSTTC----------HHHHHHHHHHHHHHHHHHHTTCBT-TBCCEEEEEECCSHHHHH----HHHHHH
25145 T ss_pred CCCceEEEEcCCCCCch----------HHHHHHHHHHHHHHHHHHHcCCcC-CeeEEEEEEeCCCChHHH----HHHHHH
25146 Confidence 45789999999998642 356788999999999999887653 788999999987764432 233333
25147
25148
25149 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRL-------FKIPQISYASTAPELSDNTRYDFFSRV 195 (908)
25150 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~-------~~iP~Is~~~~~~~l~~~~~~~~~~~~ 195 (908)
25151 ++. ++++++||+.++.....++..++. .++|+|++.+..+.+.+...+++++++
25152 T Consensus 74 l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~ 134 (399)
25153 T 4XFK_A 74 AIA-------------------DGAQIIVQGSSSAVAGQITEDVRKYNLRNKGKEVLYLNLGAEALELTGSKCHFYHFRF 134 (399)
25154 T ss_dssp HHH-------------------TTCSEEEECSCHHHHHHHHHHHHHHHHHSTTSCCEEEESSCCCGGGGTTTCCTTEEEC
25155 T ss_pred HHH-------------------cCCCEEEEcCChHHHHHHHHHHHHhccccCCCceeEEeccccchHhcCCCCCceEEEc
25156 Confidence 332 478899998877766666666665 589999877655544332246788999
25157
25158
25159 Q NP_000836.2 196 VPPDSYQAQAMVDIVTALGW--NYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETP 273 (908)
25160 Q Consensus 196 ~~~~~~~~~~~~~~l~~~~~--~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~ 273 (908)
25161 .++....+.++++++.+.+| +++++++.+++++....+.+++.+++. ++++.....+.. ....++...+++++. .
25162 T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~-~~~~~~~~~~~~i~~-~ 211 (399)
25163 T 4XFK_A 135 SPNAAIRFKTVAQGMKDKGILGERAYSINQNYSWGVDVENTVVANAKEI-GYEVVDKTLHEV-NKIQDFSPYVAKIQA-A 211 (399)
25164 T ss_dssp SCCHHHHHHHHHHHHHHHTCCCSEEEEEEESSHHHHHHHHHHHHHCCCC-CCEEEEEEEECS-SCCSCCHHHHHHHHH-T
25165 T ss_pred CCcHHHHHHHHHHHHHHcCCCCceEEEEeeCChhhhhHHHHHHHHHHHc-CCEEeeeeeccc-ccCcccHHHHHHHHH-C
25166 Confidence 99988888899999888888 899999977778888888888887765 355543322221 123456667777764 5
25167
25168
25169 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANN 353 (908)
25170 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (908)
25171 ++|+|++...+..+..+++++++.|+.. .|+. . +...............+.+...... .. ...
25172 T Consensus 212 ~~~~iv~~~~~~~~~~~~~~~~~~g~~~--~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~----------~~---~~~ 274 (399)
25173 T 4XFK_A 212 NVDTVFTGNWSNDLLLLMKAASGAGLKA--KFAT-S-FLDQPGNIGNAGAIAEGHIVSTPFN----------PE---ANG 274 (399)
25174 T ss_dssp TCSEEEECCCTHHHHHHHHHHHHHTCCS--EEEE-S-STTSTTHHHHHGGGCTTCEEEESCC----------TT---TTH
25175 T ss_pred CCCEEEEecCCHHHHHHHHHHHHcCCcc--cccc-c-cccCcchHHhchHhhcCcEEecCCC----------cc---cCC
25176 Confidence 8899988877777888999998888753 3443 2 2111100000111122322211100 00 001
25177
25178
25179 Q NP_000836.2 354 RRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPR 433 (908)
25180 Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~ 433 (908)
25181 +....|.+.+.+.++ ..++.++..+|||+++++++++++....
25182 T Consensus 275 ~~~~~f~~~~~~~~~---------------------------~~p~~~~~~~yda~~~l~~al~~~~~~~---------- 317 (399)
25183 T 4XFK_A 275 EASMAFAEDYKKVTG---------------------------HYPSYVEPAAVFGLQLFGEALKNVKPGE---------- 317 (399)
25184 T ss_dssp HHHHHHHHHHHHHHS---------------------------SCCCTTHHHHHHHHHHHHHHHHHSCCCS----------
25185 T ss_pred HHHHHHHHHHHHHHC---------------------------CCCCchHHHHHHHHHHHHHHHHhcCCCC----------
25186 Confidence 111222222222211 1123467789999999999998875311
25187
25188
25189 Q NP_000836.2 434 MSTIDGKELLGYIRAVNFNGSAGTPVTFNE-NGDAPGRYDIFQYQITNKSTEYKVIG-HWTN 493 (908)
25190 Q Consensus 434 ~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~-~G~~~~~~~i~~~~~~~~~~~~~~Vg-~~~~ 493 (908)
25191 ...+++.+.++|++..|.|.+| .+.|+. ++++...+.+.+++.. +....+| .|..
25192 T Consensus 318 -~~~~~~~l~~~l~~~~~~g~~G-~~~f~~~~~~~~~~~~i~~~~~~---~~~~~~g~~~~~ 374 (399)
25193 T 4XFK_A 318 -GKINTTDIALAIENASVKTPMG-DYSMRSDDHQAKFPMVVQEVSKK---ARIKADGTEYGF 374 (399)
25194 T ss_dssp -SCCCHHHHHHHHHHCEEEETTE-EEEECTTTCBEECCEEEEEEETT---CSSBSTTSSCEE
25195 T ss_pred -CCCCHHHHHHHHHhCceecCce-eeEeCCCCCeeeecEEEEEEcCc---ccccCCCCccee
25196 Confidence 0124567788888888999988 899997 5555567788888732 3455667 6653
25197
25198
25199 No 56
25200 >5KC9_A Glutamate receptor ionotropic, delta-1; ionotropic glutamate receptor (iGluR), neurotransmission; HET: BU1, CL, NAG, EDO, PG4; 2.3A {Mus musculus}
25201 Probab=99.60 E-value=5.6e-20 Score=201.24 Aligned_cols=372 Identities=16% Similarity=0.202 Sum_probs=224.4 Template_Neff=11.600
25202
25203 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTC-SRDTYALEQSLTFV 120 (908)
25204 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~-~~~~~a~~~~~~~~ 120 (908)
25205 .+.+++||+++|.++. ....|+++|++++|+++++++++++++.+.|++ +++..+. +.+
25206 T Consensus 3 ~~~~i~Ig~l~p~~g~----------------~~~~~~~~A~~~in~~~~~~~~~~l~~~~~d~~~~~~~~~~----~~~ 62 (428)
25207 T 5KC9_A 3 GDSIIHIGAIFEENAA----------------KDDRVFQLAVSDLSLNDDILQSEKITYSIKVIEANNPFQAV----QEA 62 (428)
25208 T ss_dssp --CEEEEEEEEESSCH----------------HHHHHHHHHHHHHHHHCSSSTTCEEEEEEEEECTTCHHHHH----HHH
25209 T ss_pred CCceeEEEEeecCCCh----------------HHHHHHHHHHHHHhcCCccCCCceEEEEEEEecCCCHHHHH----HHH
25210 Confidence 4578999999998752 466899999999999877766788998888864 4433222 233
25211
25212
25213 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
25214 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
25215 .+++. ++++++||+.++..+..++.++...++|+|++.. ++.+. ..+++++++.++..
25216 T Consensus 63 ~~l~~-------------------~~v~~viG~~~s~~~~~~~~~~~~~~ip~i~~~~-~~~~~--~~~~~~~~~~~~~~ 120 (428)
25217 T 5KC9_A 63 CDLMT-------------------QGILALVTSTGCASANALQSLTDAMHIPHLFVQR-NPGGS--PRTACHLNPSPDGE 120 (428)
25218 T ss_dssp HHHHH-------------------TCCSCEEEECCHHHHHHHHHHHHHHTCCEEECCC-CSTTS--CCCCCCCCCCCTTC
25219 T ss_pred HHHHh-------------------cCeeEEEcCCChHHHHHHHHHHHhcCCCEeeeec-CCCCC--CCcccceecCCCCC
25220 Confidence 33332 5789999998887777888889999999999854 33332 23456666555544
25221
25222
25223 Q NP_000836.2 201 ----------YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFE------- 263 (908)
25224 Q Consensus 201 ----------~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~------- 263 (908)
25225 ..+.++++++++++|+++++++.+ +++....+.+.+.+++. ++++....... .+..++.
25226 T Consensus 121 ~~~~~~~p~~~~~~a~~~~l~~~~~~~v~il~~~-~~g~~~~~~~~~~~~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~ 196 (428)
25227 T 5KC9_A 121 AYTLASRPPVRLNDVMLRLVTELRWQKFVMFYDS-EYDIRGLQSFLDQASRL-GLDVSLQKVDK--NISHVFTSLFTTMK 196 (428)
25228 T ss_dssp CCEEECSCCCCHHHHHHHHHHHTTCSEEEEEECT-TCCGGGGHHHHHHHHHT-TCEEEEEECCS--CHHHHHHHHHHHSC
25229 T ss_pred cceeccCCChhHHHHHHHHHHHcCCcEEEEEEcC-hHHHHHHHHHHHHHHhh-CCcEEEEEcCC--CcccccHHHHHHhh
25230 Confidence 578888998888899999999954 46777777777777665 35554322111 1111222
25231
25232
25233 Q NP_000836.2 264 -KIIKRLLETPNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEG-AVTILPKRASIDG 340 (908)
25234 Q Consensus 264 -~~~~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~ 340 (908)
25235 ..+++++. .+++|++......+..+++++++.|+.. .+.|+..+.+...... ........+ ...+..
25236 T Consensus 197 ~~~l~~l~~--~~~~iv~~~~~~~~~~~l~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~------- 266 (428)
25237 T 5KC9_A 197 TEELNRYRD--TLRRAILLLSPQGAHSFINEAVETNLASKDSHWVFVNEEISDPEI-LDLVHSALGRMTVVRQ------- 266 (428)
25238 T ss_dssp HHHHHHHHH--HTTEEEEESCHHHHHHHHHHHHHTTCCCTTCEEEEECSCCCHHHH-HHHHHHCSSEEEEEEE-------
25239 T ss_pred HHHHHHHhh--cccEEEEECCHHHHHHHHHHHHHcCCCCCCeEEEEecCCcCCccH-HHHHhccCcceEEEEe-------
25240 Confidence 44555542 3788877777777888999998888754 3566665432211100 000000111 111100
25241
25242
25243 Q NP_000836.2 341 FDRYFRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMH 420 (908)
25244 Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~ 420 (908)
25245 + . ...+....|.+.+.+.+.. .|..... ....+..++..+|||++++++|++++.
25246 T Consensus 267 ---~-~----~~~~~~~~f~~~~~~~~~~-------------~~~~~~~----~~~~~~~~~~~~yda~~~~~~al~~~~ 321 (428)
25247 T 5KC9_A 267 ---I-F----PSAKDNQKCMRNNHRISSL-------------LCDPQEG----YLQMLQISNLYLYDSVLMLANAFHRKL 321 (428)
25248 T ss_dssp ---C-C----CCCCCTTTTEETTEECCST-------------TTSCCTT----TGGGSCHHHHHHHHHHHHHHHHHHHHH
25249 T ss_pred ---c-C----CCchHHHHHHHHHHHchhh-------------hcCCCCC----cchhcccHHHHHHHHHHHHHHHHHHHH
25250 Confidence 0 0 0011112222223222210 0100000 001234567889999999999999886
25251
25252
25253 Q NP_000836.2 421 KDLCPG--YIGLCPRM---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITN-KSTEYKVIGHWTN 493 (908)
25254 Q Consensus 421 ~~~~~~--~~~~~~~~---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~-~~~~~~~Vg~~~~ 493 (908)
25255 ...+.. ....|... ...++..+.+.|++..|.|.+| .+.|+++|++. ..+.+++++... +...++.||.|+.
25256 T Consensus 322 ~~~~~~~~~~~~c~~~~~~~~~~~~~l~~~l~~~~~~g~~G-~v~f~~~g~~~~~~~~i~~~~~~~~~~~~~~~vg~w~~ 400 (428)
25257 T 5KC9_A 322 EDRKWHSMASLNCIRKSTKPWNGGRSMLDTIKKGHITGLTG-VMEFREDSSNPYVQFEILGTTYSETFGKDMRKLATWDS 400 (428)
25258 T ss_dssp HTTCCCCCCCCCSSSTTCCCCTTHHHHHHHHHTCEEEETTE-EEECCTTSBCCCCEEEEEEEEEETTTEEEEEEEEEEET
25259 T ss_pred HcCCCCCcCCCcccCCCCCCCcchHHHHHHHHcCeeecccc-eEEECCCCCCCeEEEEEEeceeeccCCCCeEEEEEEeC
25260 Confidence 532110 01122110 1124556778888888999999 89999999886 578888877421 1256899999997
25261
25262
25263 Q NP_000836.2 494 QL 495 (908)
25264 Q Consensus 494 ~~ 495 (908)
25265 ..
25266 T Consensus 401 ~~ 402 (428)
25267 T 5KC9_A 401 EK 402 (428)
25268 T ss_dssp TT
25269 T ss_pred CC
25270 Confidence 64
25271
25272
25273 No 57
25274 >6JFY_A Glutamate receptor ionotropic, kainate 3; Glutamate receptor, Kainate, SYM, MEMBRANE; 7.4A {Rattus norvegicus}
25275 Probab=99.58 E-value=1.1e-19 Score=216.68 Aligned_cols=373 Identities=15% Similarity=0.201 Sum_probs=238.9 Template_Neff=11.400
25276
25277 Q NP_000836.2 43 DGDIILGGLFPVHAK-GERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTC-SRDTYALEQSLTFV 120 (908)
25278 Q Consensus 43 ~~~i~Ig~l~p~~~~-~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~-~~~~~a~~~~~~~~ 120 (908)
25279 +++++||+++|.++. .. ..+.....|+++|++++|+.+++++|+++++++.|++ +++..+ .+.+
25280 T Consensus 2 ~~~i~ig~~~~~~~~~~~----------~~~~~~~~g~~~a~~~~n~~~~~~~g~~l~l~~~d~~~~~~~~~----~~~~ 67 (809)
25281 T 6JFY_A 2 PHVIRIGGIFEYADGPNA----------QVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEA----TKKA 67 (809)
25282 T ss_dssp -CEEECCBCEEESSGGGC----------SSCCHHHHHHHHHHHHHHHCTTSCSSCEEECCCCEEESSCHHHH----HHHH
25283 T ss_pred CceeEEEEeeecCCCCcc----------ccccHHHHHHHHHHHHHhcCCccCCCceeEEeeEecCCCChHHH----HHHH
25284 Confidence 468999999999864 21 3567889999999999999887777889999999977 453322 2233
25285
25286
25287 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
25288 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
25289 ++++. +++++++|+.++..+.++++.++..++|++++.++++.+.+ ..++++++.|++.
25290 T Consensus 68 ~~l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~~~ 126 (809)
25291 T 6JFY_A 68 CDQLA-------------------LGVVAIFGPSQGSTTNAVQSICNALEVPHIQLRWKHHPLDN--KDTFYVNLYPDYA 126 (809)
25292 T ss_dssp HHHHH-------------------HCCSCCBCCSCTTTHHHHHHHHHHTTCCCBCCSCCCCCSSC--CCSSCCCCCCCHH
25293 T ss_pred HHHHh-------------------cCccEEECCCCchHHHHHHHHHHHhCCCEEEEEecCCCCCC--CCeEEEEeeCCHH
25294 Confidence 33322 47899999888877778888889999999998876665443 2577899999999
25295
25296
25297 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
25298 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
25299 ..++++++++++++|+++++++ +++++....+.+++.+++. ++++.... +. .+..++...++++++ .++|+|++
25300 T Consensus 127 ~~~~~~~~~l~~~~~~~v~iv~-~~~~~~~~~~~~~~~~~~~-g~~v~~~~-~~--~~~~~~~~~~~~l~~-~~~~~vv~ 200 (809)
25301 T 6JFY_A 127 SLSHAILDLVQSLKWRSATVVY-DDSTGLIRLQELIMAPSRY-NIRLKIRQ-LP--IDSDDSRPLLKEMKR-GREFRIIF 200 (809)
25302 T ss_dssp HHHHHHHHHHHHHTCSCCCEEE-CSTHHHHHHHHHHTGGGTS-CCCCCEEE-CC--SSSCCCHHHHHHHHH-TTCCEEEE
25303 T ss_pred HHHHHHHHHHHHcCCCEEEEEE-cCCchHHHHHHHhhCcccc-CeeEEEEe-CC--CCCcccHHHHHHHHh-CCceEEEE
25304 Confidence 9999999999888999999999 6778888888888888775 46665433 22 223456677777763 57899888
25305
25306
25307 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
25308 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
25309 .+....+..++++++++|+.. .+.|+..+.+...... ........+...... + . ...+....|
25310 T Consensus 201 ~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~-~----~~~~~~~~f 264 (809)
25311 T 6JFY_A 201 DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDL-EPYRYSGVNLTGFRI----------L-N----VDNPHVSAI 264 (809)
25312 T ss_dssp CSCHHHHHHHHHHHHHTTCCCTTCEEECCSSCTTSSCC-HHHHTTCCEEECCBC----------S-C----TTCHHHHHH
25313 T ss_pred ECCHHHHHHHHHHHHHccCcCCCeEEEEeeCCcccCCC-cccccCCceeEEEEE----------e-e----CCCchHHHH
25314 Confidence 877777888999999888754 3456654432211100 000000011110000 0 0 001111122
25315
25316
25317 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRM-STID 438 (908)
25318 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~-~~~~ 438 (908)
25319 .+.+++.+..... ..|... ....++.++..+|||++++++|++++....+.. ..|... ...+
25320 T Consensus 265 ~~~~~~~~~~~~~---------~~~~~~------~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~--~~~~~~~~~~~ 327 (809)
25321 T 6JFY_A 265 VEKWSMERLQAAP---------RAESGL------LDGVMMTDAALLYDAVHIVSVTYQRAPQMTVNS--LQCHRHKAWRF 327 (809)
25322 T ss_dssp HHHHHHHCCC--------------------------CCCCHHHHHHHHHHHHHHHHHHSSCCCCCCC--CCSSSCCCCHH
25323 T ss_pred HHHhhHHHHhhCC---------cccCCc------CCCCcchHHHHHHHHHHHHHHHHHhCcCCCCcc--ccccccccccc
25324 Confidence 2222222110000 000000 001234567889999999999999987532111 111111 1124
25325
25326
25327 Q NP_000836.2 439 GKELLGYIRAVNFNGSAGTPVTFNENGDA-P-GRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
25328 Q Consensus 439 ~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~-~-~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
25329 ++.+.++|++..|.|.+| ++.||++|++ . ..+.+.+++ ++.++.+|.|.+.
25330 T Consensus 328 ~~~l~~~l~~~~~~g~~G-~~~f~~~~~~~~~~~~~i~~~~----~~~~~~v~~~~~~ 380 (809)
25331 T 6JFY_A 328 GGRFMNFIKEAQWEGLTG-RIVFNKTSGLRTDFDLDIISLK----EDGLEKVGVWSPA 380 (809)
25332 T ss_dssp HHHHHHHHHTCCEEETTE-EECCBTTTTBCCCCCEEEEEEE----TTEEEEEEEEETT
25333 T ss_pred hhHHHHHHHHhccCCCcc-cEEEecCCCceeeeEEEEEEec----ccCceEeEEEeCC
25334 Confidence 567888888889999988 8999986443 3 266777776 2568888988764
25335
25336
25337 No 58
25338 >4GPA_A Glutamate receptor 4; PBP fold, GLUTAMATE RECEPTOR, LIGAND-GATED; HET: NAG; 2.25A {Rattus norvegicus}
25339 Probab=99.58 E-value=1.1e-19 Score=196.06 Aligned_cols=361 Identities=14% Similarity=0.180 Sum_probs=224.0 Template_Neff=11.800
25340
25341 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLL-SNITLGVRI-LDTCSRDTYALEQSLTFV 120 (908)
25342 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il-~g~~l~~~~-~d~~~~~~~a~~~~~~~~ 120 (908)
25343 +++++||+++|.++. ....|+++|++++|+++++. +++++++.+ .|+.+++.. ..+.+
25344 T Consensus 3 ~~~i~ig~~~~~~~~----------------~~~~~~~~a~~~~n~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~ 62 (389)
25345 T 4GPA_A 3 PSSVQIGGLFIRNTD----------------QEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFA----VTNAF 62 (389)
25346 T ss_dssp CSEEEEEEEECTTCH----------------HHHHHHHHHHHHHHTCSCTTTCSSEEEEEEEECSSCCHHH----HHHHH
25347 T ss_pred CCceeeeeEEecCCH----------------HHHHHHHHHHHHHhcCCCcCCCCceeeeeeeecCCCCHHH----HHHHH
25348 Confidence 568999999998752 56789999999999876542 346777664 344444332 22333
25349
25350
25351 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
25352 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
25353 .+++. +++++|||+.++.....++.++...+||+|++.+..+ ..+++++++.++
25354 T Consensus 63 ~~~~~-------------------~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~-----~~~~~~~~~~~~-- 116 (389)
25355 T 4GPA_A 63 CSQYS-------------------RGVFAIFGLYDKRSVHTLTSFCSALHISLITPSFPTE-----GESQFVLQLRPS-- 116 (389)
25356 T ss_dssp HHHHH-------------------TTCSEEEECCCTTTHHHHHHHHHHTTCEEEECSCCCS-----SCCSSEEECSCC--
25357 T ss_pred HHHHh-------------------hCeeEEEeCCCchHHHHHHHHHHHcCCcEEeCCCCCC-----CCcccEEEeecc--
25358 Confidence 33332 4788999988777777788888999999999876543 236788888887
25359
25360
25361 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
25362 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
25363 .+.++++++++++|+++++++.++ ++....+.+++.+++. ++++....... .+..++...+++++. .++++|++
25364 T Consensus 117 -~~~~~~~~~~~~~~~~v~il~~~~-~~~~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~~~~~~~~~i~~-~~~~~vv~ 190 (389)
25365 T 4GPA_A 117 -LRGALLSLLDHYEWNCFVFLYDTD-RGYSILQAIMEKAGQN-GWHVSAICVEN--FNDVSYRQLLEELDR-RQEKKFVI 190 (389)
25366 T ss_dssp -CHHHHHHHHHHTTCCEEEEEECST-TCSHHHHHHHHHHHTT-TCEEEEEECTT--CCHHHHHHHHHHHHH-HTCCEEEE
25367 T ss_pred -hHHHHHHHHHHcCCcEEEEEEcCh-hHHHHHHHHHHHHhhc-CCeEEEEEeeC--CCCccHHHHHHHHHh-cCCcEEEE
25368 Confidence 567788888888999999999655 7777778888877765 35554321111 122345566777763 57898888
25369
25370
25371 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
25372 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
25373 .+....+..+++++++.|+.. .+.|+..+.+...... ........+...... .. ...+....|
25374 T Consensus 191 ~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~----~~~~~~~~f 254 (389)
25375 T 4GPA_A 191 DCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISL-ERFIHGGANVTGFQL-----------VD----FNTPMVTKL 254 (389)
25376 T ss_dssp ECCHHHHHHHHHHHHHHTCSBTTCEEEECSSBGGGSCC-HHHHHHBCEEEEEEC-----------SC----TTSHHHHHH
25377 T ss_pred ECCHHHHHHHHHHHHHcCCCCCCeEEEEEcCCccccCh-HHhccCCeeEEEEEE-----------ec----CCCHHHHHH
25378 Confidence 776667788999998888753 3556665432211100 000000111111100 00 001111223
25379
25380
25381 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP----GYIGLCPRM- 434 (908)
25382 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~----~~~~~~~~~- 434 (908)
25383 .+.|++.++.. |... ...+..++..+||++++++++++++....+. .....|...
25384 T Consensus 255 ~~~~~~~~~~~-------------~~~~-------~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~~~c~~~~ 314 (389)
25385 T 4GPA_A 255 MDRWKKLDQRE-------------YPGS-------ETPPKYTSALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANP 314 (389)
25386 T ss_dssp HHHHTTSCTTT-------------STTT-------TSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCTTCCCCTTCSS
25387 T ss_pred HHHHHHhcccc-------------CCCC-------CCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCccccCC
25388 Confidence 33333322210 0000 0113456778999999999999987643211 001122210
25389
25390
25391 Q NP_000836.2 435 --STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQLH 496 (908)
25392 Q Consensus 435 --~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~~~ 496 (908)
25393 ...++..+.+.|++..|.|.+| ++.|+++|++.. .+.+++++ ++.++.||.|+....
25394 T Consensus 315 ~~~~~~~~~l~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~i~~~~----~~~~~~vg~w~~~~g 374 (389)
25395 T 4GPA_A 315 AAPWGQGIDMERTLKQVRIQGLTG-NVQFDHYGRRVNYTMDVFELK----STGPRKVGYWNDMDK 374 (389)
25396 T ss_dssp CCCCTTHHHHHHHHHTCEEEETTE-EEEBCTTSCBCSCEEEEEEEE----TTEEEEEEEEETTTE
25397 T ss_pred CCcccchHHHHHHHhcCCcccCCe-eeEECCCCceeeeeEEEEEcc----cCCCEEeEEEeCCcc
25398 Confidence 1124556778888888999988 899999898875 78888887 246889999987643
25399
25400
25401 No 59
25402 >5EWM_A NMDA glutamate receptor subunit, Glutamate; Glutamate receptor, allosteric modulator, GluN2B; HET: MAN, 5SM, NAG, BMA; 2.76A {Xenopus laevis}
25403 Probab=99.58 E-value=1.2e-19 Score=195.95 Aligned_cols=351 Identities=18% Similarity=0.242 Sum_probs=221.3 Template_Neff=11.800
25404
25405 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
25406 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
25407 +++++||+++|.+ ....|+++|++++|+.++ +.++++++...|+..++..+. +.+.+
25408 T Consensus 2 ~~~i~Ig~~~~~~------------------~~~~~~~~a~~~~n~~~~-~~~~~l~~~~~d~~~~~~~~~----~~~~~ 58 (390)
25409 T 5EWM_A 2 PKIVNIGAVLSTK------------------KHEQIFREAVNQANKRHF-TRKIQLQATSVTHRPNAIQMA----LSVCE 58 (390)
25410 T ss_dssp CEEEEEEEEESSH------------------HHHHHHHHHHHHHHHHSC-CSSEEEEEEEEECCSSHHHHH----HHCCC
25411 T ss_pred CcceEEEEEeCch------------------hHHHHHHHHHHHHhhhcC-CCCceEEEEEecCCCCHHHHH----HHHHH
25412 Confidence 4678999999875 245789999999998753 356778877666555433222 22222
25413
25414
25415 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAA-----ASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
25416 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~-----~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
25417 ++. .+++++++|+. ++..+..++.++...++|+|++.+..+.+++...+++++++.+
25418 T Consensus 59 ~~~------------------~~~v~~vig~~~~~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~ 120 (390)
25419 T 5EWM_A 59 DLI------------------SSQVYAILVSHPPAPTDHLTPTPISYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVP 120 (390)
25420 T ss_dssp CCG------------------GGTEEEEEECCCC-----CCSHHHHHHHHHTTCCEEESSCCCGGGGCTTTSTTEEESSC
25421 T ss_pred HHh------------------hcCcEEEEECCCCCCCCCCCchHHHHHHHhcCCCEEEccCCCcccccccccceEEecCC
25422 Confidence 221 15788999873 3344455677888899999998887766654445788999999
25423
25424
25425 Q NP_000836.2 198 PDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQS-------QKIP------------REPR 258 (908)
25426 Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-------~~~~------------~~~~ 258 (908)
25427 +...++.++++++++++|+++++++.++.++....+.+++.+++. ++++... ..+. ...+
25428 T Consensus 121 ~~~~~~~~~~~~~~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (390)
25429 T 5EWM_A 121 PYSHQALVWFEMMRLFNWNHVILIVSDDHEGRAAQKKLETLLEGK-ESKSKKRNYENLDQLSYDNKRGPKADKVLQFEPG 199 (390)
25430 T ss_dssp CGGGGHHHHHHHHHHHTCCEEEEEEESSHHHHHHHHHHHHHHCC------------------------CEEEEEEEECTT
25431 T ss_pred CHHHHHHHHHHHHHHcCCCEEEEEEecCCcchHHHHHHHHHHhcC-CccccccccccccccccccCCCCCcccceecCCC
25432 Confidence 998889999999988999999999987778888888888877765 3443210 0000 0011
25433
25434
25435 Q NP_000836.2 259 PGEFEKIIKRLLETPNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRAS 337 (908)
25436 Q Consensus 259 ~~~~~~~~~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 337 (908)
25437 ..++...+++++. .++|+|++.........+++++++.++.. ++.|+..+.+..... ......+.+.
25438 T Consensus 200 ~~~~~~~~~~l~~-~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~------- 267 (390)
25439 T 5EWM_A 200 TKNLTALLLEAKE-LEARVIILSASEDDATAVYKSAAMLDMTGAGYVWLVGEREISGSA----LRYAPDGIIG------- 267 (390)
25440 T ss_dssp CSCCHHHHHHHHH-SSCCEEEEECCHHHHHHHHHHHHHTTCSSTTCEEECCSGGGSHHH----HHHCCTTCEE-------
25441 T ss_pred chhHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHcCCCCCCEEEEEecccCCcch----hhcCCCeEEE-------
25442 Confidence 2345556666663 57899888776667778888888877743 456776543321100 0000000000
25443
25444
25445 Q NP_000836.2 338 IDGFDRYFRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALH 417 (908)
25446 Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~ 417 (908)
25447 + . . ..+..++..+|||++++++|++
25448 T Consensus 268 ---------------------~-~----~-----------------------------~~~~~~~~~~ydav~~~~~al~ 292 (390)
25449 T 5EWM_A 268 ---------------------L-Q----L-----------------------------INGKNESAHISDAVAVVAQAIH 292 (390)
25450 T ss_dssp ---------------------E-E----E-----------------------------TTTTCHHHHHHHHHHHHHHHHH
25451 T ss_pred ---------------------E-E----E-----------------------------cCCCchHHHHHHHHHHHHHHHH
25452 Confidence 0 0 0 0112356789999999999999
25453
25454
25455 Q NP_000836.2 418 NMHKDLCPG-YIGLCPRMS--TIDGKELLGYIRA-VNFNGSAGTPVTFNENGDA-PGRYDIFQYQITNKSTEYKVIGHWT 492 (908)
25456 Q Consensus 418 ~~~~~~~~~-~~~~~~~~~--~~~~~~l~~~l~~-~~f~G~~G~~v~Fd~~G~~-~~~~~i~~~~~~~~~~~~~~Vg~~~ 492 (908)
25457 +.....+.. ....|.... ...+..+.+.+++ ..|.|.+| .+.||++|++ ...+.+++++ .+.++.+|.|+
25458 T Consensus 293 ~~~~~~~~~~~~~~c~~~~~~~~~~~~l~~~l~~~~~~~g~~G-~i~fd~~g~~~~~~~~i~~~~----~~~~~~vg~~~ 367 (390)
25459 T 5EWM_A 293 ELFEMENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGVTG-RIEFNEDGDRKFAQYSIMNLQ----NRKLVQVGIFN 367 (390)
25460 T ss_dssp HHTTSSSCCCCCSSSTTCCSCCTTHHHHHHHHHTCCEEEETTE-EEEECTTSCEESCCEEEEEEE----TTEEEEEEEEC
25461 T ss_pred HHHhccCCCCCCCccCCCCchhccHHHHHHHHHcCCCCCCCcc-cEEECCCCCcccceEEEEEcC----CCeEEEEEEEe
25462 Confidence 987543211 011222110 1134456667765 46888888 8999999998 4788888887 35789999998
25463
25464
25465 Q NP_000836.2 493 NQLH-LKVEDMQWAHR 507 (908)
25466 Q Consensus 493 ~~~~-~~~~~i~w~~~ 507 (908)
25467 .... .+...+.|+++
25468 T Consensus 368 ~~~~~~~~~~~~w~~~ 383 (390)
25469 T 5EWM_A 368 GSYIIQNDRKIIWPGG 383 (390)
25470 T ss_dssp SSCEEECSSCCCCSSS
25471 T ss_pred CceeeecCCcccCCCC
25472 Confidence 6522 22224678653
25473
25474
25475 No 60
25476 >3H6G_A Glutamate receptor, ionotropic kainate 2; MEMBRANE PROTEIN GLYCOPROTEIN, Cell junction; HET: TLA, NAG; 2.697A {Rattus norvegicus}
25477 Probab=99.57 E-value=1.2e-19 Score=196.12 Aligned_cols=373 Identities=17% Similarity=0.207 Sum_probs=225.6 Template_Neff=12.000
25478
25479 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCS-RDTYALEQSLTFVQ 121 (908)
25480 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~-~~~~a~~~~~~~~~ 121 (908)
25481 .++++||+++|.++.. .+.....|+++|++++|+++++++++++++...|+.. +...+ .+.+.
25482 T Consensus 2 ~~~i~ig~~~~~~g~~------------~~~~~~~~~~~a~~~~n~~~~~~~~~~l~~~~~d~~~~~~~~~----~~~~~ 65 (395)
25483 T 3H6G_A 2 THVLRFGGIFEYVESG------------PMGAEELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEA----SKKAC 65 (395)
25484 T ss_dssp CEEEEEEEEEEESSSC------------SCCHHHHHHHHHHHHHHHCSSSSSSEEEEEEEEEEETTCHHHH----HHHHH
25485 T ss_pred CCeEEEEEEeccCCCC------------CCcHHHHHHHHHHHHHhcCcccCCCCEEEEEEEecCcchhHHH----HHHHH
25486 Confidence 4679999999998742 3567889999999999998877767888887777654 32211 11111
25487
25488
25489 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
25490 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
25491 +.. .++++++||+.++.....++.++...++|+|++.+..+.+.. .+++++++.++...
25492 T Consensus 66 ~~~-------------------~~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~~~~ 124 (395)
25493 T 3H6G_A 66 DQL-------------------SLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDN--KDSFYVSLYPDFSS 124 (395)
25494 T ss_dssp HHH-------------------HHCCSCEECCSSHHHHHHHHHHHHHTTCCEEECSCCCCCTTC--CCCSEEEEEECHHH
25495 T ss_pred HHH-------------------hcCceEEECCCCHHHHHHHHHHHHHhCCCEEEeecCccccCC--CCceeEEcCCCHHH
25496 Confidence 111 147889999988877777888888999999998775544332 35788999999888
25497
25498
25499 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
25500 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
25501 .++++++++++++|+++++++.+ .++....+.+.+.+++. ++++... .+. ....++...+++++. .+++++++.
25502 T Consensus 125 ~~~~~~~~~~~~~~~~v~il~~~-~~~~~~~~~~~~~~~~~-~~~v~~~-~~~--~~~~~~~~~~~~l~~-~~~~~iv~~ 198 (395)
25503 T 3H6G_A 125 LSRAILDLVQFFKWKTVTVVYDD-STGLIRLQELIKAPSRY-NLRLKIR-QLP--ADTKDAKPLLKEMKR-GKEFHVIFD 198 (395)
25504 T ss_dssp HHHHHHHHHHHTTCSEEEEEESS-THHHHHTHHHHTGGGTS-SCEEEEE-ECC--SSGGGGHHHHHHHHH-TTCCEEEEE
25505 T ss_pred HHHHHHHHHHHcCCCEEEEEEeC-CccHHHHHHHHHCcCcc-CceEEEE-ECC--CCCCCcHHHHHHHHh-CCCeEEEEE
25506 Confidence 88999999888899999999954 37766677777776664 3554432 222 223355666777753 477888877
25507
25508
25509 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
25510 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
25511 ........+++++++.|+.. .+.|+........... . .....+... ..+..+ . ...+....+.
25512 T Consensus 199 ~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~--------~~~~~~-~----~~~~~~~~~~ 262 (395)
25513 T 3H6G_A 199 CSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDV-E--PYRYSGVNM--------TGFRIL-N----TENTQVSSII 262 (395)
25514 T ss_dssp SCHHHHHHHHHHHHHTTCCSTTCEEEECCTTGGGBCC-T--TTTTSCCEE--------EEEECS-C----TTSHHHHHHH
25515 T ss_pred CCHHHHHHHHHHHHHcCCCcCCeEEEEeeCCcccCcc-h--hhccCCeee--------EEEEEe-c----CCCcchHHHH
25516 Confidence 76677788899998888753 2345543211100000 0 000001000 000000 0 0001111222
25517
25518
25519 Q NP_000836.2 361 EFWEENF-GCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRM-STID 438 (908)
25520 Q Consensus 361 ~~~~~~~-~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~-~~~~ 438 (908)
25521 +.|.+.+ .+.. .+... .....+..++..+|||+++++++++++....+.. ..|... ...+
25522 T Consensus 263 ~~~~~~~~~~~~-----------~~~~~-----~~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~--~~~~~~~~~~~ 324 (395)
25523 T 3H6G_A 263 EKWSMERLQAPP-----------KPDSG-----LLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSS--LQCNRHKPWRF 324 (395)
25524 T ss_dssp HHHHHC-----------------CCSSC-----BCTTCCCHHHHHHHHHHHHHHHHHHTCTTCCCCC--CCTTSCCCCTT
25525 T ss_pred HHHHHHhhcCCC-----------CCCCC-----ccCcCCChHHHHHHHHHHHHHHHHHhccccCCCC--CCCCCCCCccc
25526 Confidence 2222211 1100 00000 0001134567889999999999999986543211 112111 1123
25527
25528
25529 Q NP_000836.2 439 GKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQL 495 (908)
25530 Q Consensus 439 ~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~ 495 (908)
25531 +..+.+.|++..|.|.+| ++.||++|++...+.+..++.. ++.++.||.|....
25532 T Consensus 325 ~~~l~~~l~~~~~~g~~G-~~~f~~~~~~~~~~~~~~~~~~--~~~~~~vg~~~~~~ 378 (395)
25533 T 3H6G_A 325 GTRFMSLIKEAHWEGLTG-RITFNKTNGLRTDFDLDVISLK--EEGLEKIGTWDPAS 378 (395)
25534 T ss_dssp HHHHHHHHHHCEEEETTE-EEECCTTTSEECCCCEEEEEEE--TTEEEEEEEEETTT
25535 T ss_pred cHHHHHHHHhccccCCcc-eEEEcCCCCcccceEEEEEEee--ccccEEEEEEeCCC
25536 Confidence 456777888888999988 8999987666554444333321 35789999998764
25537
25538
25539 No 61
25540 >3H6G_B Glutamate receptor, ionotropic kainate 2; MEMBRANE PROTEIN GLYCOPROTEIN, Cell junction; HET: NAG, TLA; 2.697A {Rattus norvegicus}
25541 Probab=99.57 E-value=1.2e-19 Score=196.12 Aligned_cols=373 Identities=17% Similarity=0.207 Sum_probs=226.1 Template_Neff=12.000
25542
25543 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCS-RDTYALEQSLTFVQ 121 (908)
25544 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~-~~~~a~~~~~~~~~ 121 (908)
25545 .++++||+++|.++.. .+.....|+++|++++|+++++++++++++...|+.. +...+ .+.+.
25546 T Consensus 2 ~~~i~ig~~~~~~g~~------------~~~~~~~~~~~a~~~~n~~~~~~~~~~l~~~~~d~~~~~~~~~----~~~~~ 65 (395)
25547 T 3H6G_B 2 THVLRFGGIFEYVESG------------PMGAEELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEA----SKKAC 65 (395)
25548 T ss_dssp CEEEEEEEEEEESSSC------------SCCHHHHHHHHHHHHHHHCSSSSSSEEEEEEEEEEETTCHHHH----HHHHH
25549 T ss_pred CCeEEEEEEeccCCCC------------CCcHHHHHHHHHHHHHhcCcccCCCCEEEEEEEecCcchhHHH----HHHHH
25550 Confidence 4679999999998742 3567889999999999998877767888887777654 32211 11111
25551
25552
25553 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
25554 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
25555 +.. .++++++||+.++.....++.++...++|+|++.+..+.+.. .+++++++.++...
25556 T Consensus 66 ~~~-------------------~~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~~~~ 124 (395)
25557 T 3H6G_B 66 DQL-------------------SLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDN--KDSFYVSLYPDFSS 124 (395)
25558 T ss_dssp HHH-------------------HHCCSCEECCSSHHHHHHHHHHHHHTTCCEEECSCCCCCTTC--CCCSEEEEEECHHH
25559 T ss_pred HHH-------------------hcCceEEECCCCHHHHHHHHHHHHHhCCCEEEeecCccccCC--CCceeEEcCCCHHH
25560 Confidence 111 147889999988877777888888999999998775544332 35788999999888
25561
25562
25563 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
25564 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
25565 .++++++++++++|+++++++.+ .++....+.+.+.+++. ++++... .+. ....++...+++++. .+++++++.
25566 T Consensus 125 ~~~~~~~~~~~~~~~~v~il~~~-~~~~~~~~~~~~~~~~~-~~~v~~~-~~~--~~~~~~~~~~~~l~~-~~~~~iv~~ 198 (395)
25567 T 3H6G_B 125 LSRAILDLVQFFKWKTVTVVYDD-STGLIRLQELIKAPSRY-NLRLKIR-QLP--ADTKDAKPLLKEMKR-GKEFHVIFD 198 (395)
25568 T ss_dssp HHHHHHHHHHHTTCSEEEEEESS-THHHHHTHHHHTGGGTS-SCEEEEE-ECC--SSGGGCHHHHHHHHH-TTCCEEEEE
25569 T ss_pred HHHHHHHHHHHcCCCEEEEEEeC-CccHHHHHHHHHCcCcc-CceEEEE-ECC--CCCCCcHHHHHHHHh-CCCeEEEEE
25570 Confidence 88999999888899999999954 37766677777776664 3554432 222 223355666777753 477888877
25571
25572
25573 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
25574 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
25575 ........+++++++.|+.. .+.|+........... . .....+... ..+..+ . ...+....+.
25576 T Consensus 199 ~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~--------~~~~~~-~----~~~~~~~~~~ 262 (395)
25577 T 3H6G_B 199 CSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDV-E--PYRYSGVNM--------TGFRIL-N----TENTQVSSII 262 (395)
25578 T ss_dssp SCHHHHHHHHHHHHHTTCCSTTCEEEECCTTGGGBCC-T--TTTTSCCEE--------EEEECS-C----TTSHHHHHHH
25579 T ss_pred CCHHHHHHHHHHHHHcCCCcCCeEEEEeeCCcccCcc-h--hhccCCeee--------EEEEEe-c----CCCcchHHHH
25580 Confidence 76677788899998888753 2345543211100000 0 000001000 000000 0 0001111222
25581
25582
25583 Q NP_000836.2 361 EFWEENF-GCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRM-STID 438 (908)
25584 Q Consensus 361 ~~~~~~~-~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~-~~~~ 438 (908)
25585 +.|.+.+ .+.. .+... .....+..++..+|||+++++++++++....+.. ..|... ...+
25586 T Consensus 263 ~~~~~~~~~~~~-----------~~~~~-----~~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~--~~~~~~~~~~~ 324 (395)
25587 T 3H6G_B 263 EKWSMERLQAPP-----------KPDSG-----LLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSS--LQCNRHKPWRF 324 (395)
25588 T ss_dssp HHHHHHHTTSCC-----------CSSSC-----BCTTCCCHHHHHHHHHHHHHHHHHHTCTTCCCCC--CCTTSCCCCTT
25589 T ss_pred HHHHHHhhcCCC-----------CCCCC-----ccCcCCChHHHHHHHHHHHHHHHHHhccccCCCC--CCCCCCCCccc
25590 Confidence 2222211 1100 00000 0001134567889999999999999986543211 112111 1123
25591
25592
25593 Q NP_000836.2 439 GKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQL 495 (908)
25594 Q Consensus 439 ~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~~ 495 (908)
25595 +..+.+.|++..|.|.+| ++.||++|++...+.+..++.. ++.++.||.|....
25596 T Consensus 325 ~~~l~~~l~~~~~~g~~G-~~~f~~~~~~~~~~~~~~~~~~--~~~~~~vg~~~~~~ 378 (395)
25597 T 3H6G_B 325 GTRFMSLIKEAHWEGLTG-RITFNKTNGLRTDFDLDVISLK--EEGLEKIGTWDPAS 378 (395)
25598 T ss_dssp HHHHHHHHHTCEEEETTE-EEECCTTTSEECCCCEEEEEEE--TTEEEEEEEEETTT
25599 T ss_pred cHHHHHHHHhccccCCcc-eEEEcCCCCcccceEEEEEEee--ccccEEEEEEeCCC
25600 Confidence 456777888888999988 8999987666554444333321 35789999998764
25601
25602
25603 No 62
25604 >6JFY_B Glutamate receptor ionotropic, kainate 3; Glutamate receptor, Kainate, SYM, MEMBRANE; 7.4A {Rattus norvegicus}
25605 Probab=99.57 E-value=1.2e-19 Score=216.12 Aligned_cols=373 Identities=15% Similarity=0.201 Sum_probs=239.8 Template_Neff=11.300
25606
25607 Q NP_000836.2 43 DGDIILGGLFPVHAK-GERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTC-SRDTYALEQSLTFV 120 (908)
25608 Q Consensus 43 ~~~i~Ig~l~p~~~~-~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~-~~~~~a~~~~~~~~ 120 (908)
25609 +++++||+++|.++. .. ..+.....|+++|++++|+.+++++|+++++++.|++ +++..+ .+.+
25610 T Consensus 2 ~~~i~ig~~~~~~~~~~~----------~~~~~~~~g~~~a~~~~n~~~~~~~g~~l~l~~~d~~~~~~~~~----~~~~ 67 (809)
25611 T 6JFY_B 2 PHVIRIGGIFEYADGPNA----------QVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEA----TKKA 67 (809)
25612 T ss_pred CCceEEEEEEeCCCCchh----------HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEeCCCCCHHHH----HHHH
25613 Confidence 468999999999864 21 3567889999999999999887777889999999977 453332 2233
25614
25615
25616 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
25617 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
25618 ++++. +++++++|+.++..+.+++..++..++|++++.++++.+.+ ..++++++.|++.
25619 T Consensus 68 ~~l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~~~ 126 (809)
25620 T 6JFY_B 68 CDQLA-------------------LGVVAIFGPSQGSTTNAVQSICNALEVPHIQLRWKHHPLDN--KDTFYVNLYPDYA 126 (809)
25621 T ss_pred HHHHH-------------------cCCCEEEcCCCcHHHHHHHHHHHHHCCCEEeCCCCCcccCC--CCCCeeecCCCHH
25622 Confidence 33322 47899999888877778888889999999998876665443 2577999999999
25623
25624
25625 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
25626 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
25627 .+++++++++++++|+++++++ +++++....+.+++.+++. ++++.... +. .+..++...++++++ .++|+|++
25628 T Consensus 127 ~~~~~~~~~l~~~~~~~v~iv~-~~~~~~~~~~~~~~~~~~~-g~~v~~~~-~~--~~~~~~~~~~~~l~~-~~~~~vv~ 200 (809)
25629 T 6JFY_B 127 SLSHAILDLVQSLKWRSATVVY-DDSTGLIRLQELIMAPSRY-NIRLKIRQ-LP--IDSDDSRPLLKEMKR-GREFRIIF 200 (809)
25630 T ss_pred HHHHHHHHHHHHhCCCEEEEEE-eChhhHHHHHHHHHHHHHC-CCEEEeee-cC--CCCCCcHHHHHHHHH-hCCCEEEE
25631 Confidence 9999999999888999999999 6778888888888888775 46665433 22 223456677777763 57899988
25632
25633
25634 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
25635 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
25636 .+....+..++++++++|+.. .+.|+..+.+...... ........+...... + . ...+....|
25637 T Consensus 201 ~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~-~----~~~~~~~~f 264 (809)
25638 T 6JFY_B 201 DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDL-EPYRYSGVNLTGFRI----------L-N----VDNPHVSAI 264 (809)
25639 T ss_pred eCCHHHHHHHHHHHHHcCCCCCCeeEEEecCCCCCCch-HhhcCCceeEEEEec----------C-C----CCChHHHHH
25640 Confidence 877777888999999888754 2456654432211100 000000011110000 0 0 001111122
25641
25642
25643 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRM-STID 438 (908)
25644 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~-~~~~ 438 (908)
25645 .+.+++.+..... ..|... ....++.++..+|||++++++|++++....+.. ..|... ...+
25646 T Consensus 265 ~~~~~~~~~~~~~---------~~~~~~------~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~--~~~~~~~~~~~ 327 (809)
25647 T 6JFY_B 265 VEKWSMERLQAAP---------RAESGL------LDGVMMTDAALLYDAVHIVSVTYQRAPQMTVNS--LQCHRHKAWRF 327 (809)
25648 T ss_pred HHHHHHHHCCCCC---------CCCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCc--cccccCCCccc
25649 Confidence 2222222110000 000000 001234567889999999999999987532111 111111 1124
25650
25651
25652 Q NP_000836.2 439 GKELLGYIRAVNFNGSAGTPVTFNENGDA-P-GRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
25653 Q Consensus 439 ~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~-~-~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
25654 ++.+.++|++..|.|.+| ++.||++|++ . ..+.+.+++ ++.++.+|.|.+.
25655 T Consensus 328 ~~~l~~~l~~~~~~g~~G-~~~f~~~~~~~~~~~~~i~~~~----~~~~~~v~~~~~~ 380 (809)
25656 T 6JFY_B 328 GGRFMNFIKEAQWEGLTG-RIVFNKTSGLRTDFDLDIISLK----EDGLEKVGVWSPA 380 (809)
25657 T ss_pred HHHHHHHHHhcCcCCCCC-cEEecCCCCccceeEEEEEecc----CCceEEeEEEeCC
25658 Confidence 567788888889999988 8999986443 3 266777776 2568888988764
25659
25660
25661 No 63
25662 >5L2E_B Cerebellin-1; Synapse Protein, Cell Surface Protein; 4.152A {Rattus norvegicus}
25663 Probab=99.57 E-value=1.3e-19 Score=211.78 Aligned_cols=379 Identities=16% Similarity=0.219 Sum_probs=233.2 Template_Neff=11.900
25664
25665 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRI-LDTCSRDTYALEQSLTFV 120 (908)
25666 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~-~d~~~~~~~a~~~~~~~~ 120 (908)
25667 .+++++||+++|.++ .....|++.|++++|+++++++|+++++++ .|+++++..+.+.+
25668 T Consensus 2 ~~~~i~Ig~~~~~~~----------------~~~~~~~~~a~~~iN~~~~~~~g~~i~~~~~~d~~~~~~~a~~~~---- 61 (688)
25669 T 5L2E_B 2 SDSIIHIGAIFDESA----------------KKDDEVFRTAVGDLNQNEEILQTEKITFSVTFVDGNNPFQAVQEA---- 61 (688)
25670 T ss_dssp -CCCEEEEEEEETTC----------------HHHHHHHHHHHHHHHHCSSSSTTCCEEEEEEEECTTCHHHHHHHH----
25671 T ss_pred CCceeeeEEEecCCC----------------chhHHHHHHHHHHHhcCcccccCcceEEEEEEeCCCCHHHHHHHH----
25672 Confidence 357899999999875 245689999999999988777789999998 88887754433333
25673
25674
25675 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAP-------ELSDNTRYDFFS 193 (908)
25676 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~-------~l~~~~~~~~~~ 193 (908)
25677 .+++. ++++++||+.++..+..++.++...++|+|++.+..+ .+++...+++++
25678 T Consensus 62 ~~l~~-------------------~~v~~viG~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~l~~~~~~~~~~ 122 (688)
25679 T 5L2E_B 62 CELMN-------------------QGILALVSSIGCTSAGSLQSLADAMHIPHLFIQRSTAGTPRSGCGLTRSNRNDDYT 122 (688)
25680 T ss_dssp HHHHH-------------------HCCSCEEEEECHHHHHHHHHHHHHHTCCEEEEECCGGGCCCCCCCCCCCTTSCCCE
25681 T ss_pred HHHHH-------------------cCeeEEEecCCcchHHHHHHHHHHcCCCEEEeecCCCCCCCCCcccccCCCCCceE
25682 Confidence 33322 4788999998887777788888999999999876554 333334578899
25683
25684
25685 Q NP_000836.2 194 RVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPRE------PRPGEFEKIIK 267 (908)
25686 Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~------~~~~~~~~~~~ 267 (908)
25687 ++.+++..++.++++++++++|+++++++++ +++....+.+.+.+++. ++++.....++.. ....+....++
25688 T Consensus 123 ~~~~~~~~~~~~l~~~~~~~~~~~v~i~~~~-~~g~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~ 200 (688)
25689 T 5L2E_B 123 LSVRPPVYLNEVILRVVTEYAWQKFIIFYDS-EYDIRGIQEFLDKVSQQ-GMDVALQKVENNINKMITTLFDTMRIEELN 200 (688)
25690 T ss_dssp EECSCCCCHHHHHHHHHHHTTCCEEEEEECT-TCCGGGGHHHHHHHHHT-TCEEEEEECCSCHHHHHHHHHHHSCHHHHH
25691 T ss_pred EEecCChhHHHHHHHHHHHhCCcEEEEEEcC-ccchHHHHHHHHHHHhc-CcchHHHHhhchhHHhHHhhhccccHHHHH
25692 Confidence 9999988889999999988899999988754 47777777888777765 4665443222110 00122334445
25693
25694
25695 Q NP_000836.2 268 RLLETPNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFR 346 (908)
25696 Q Consensus 268 ~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 346 (908)
25697 ++. ..+++|++......+..+++++++.|+.. ++.|+..+.+...............+........ .
25698 T Consensus 201 ~~~--~~~~~ii~~~~~~~~~~~l~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 268 (688)
25699 T 5L2E_B 201 RYR--DTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTF----------P 268 (688)
25700 T ss_dssp HHH--HHTTEEEEESCHHHHHHHHHHHHHTTSSCTTCEEEEECSCCCHHHHHHHHHHCCSEEEEEEECC----------C
25701 T ss_pred HHH--HhccEEEEEcCHHHHHHHHHHHHHccCcCCCeEEEEecCCcccCChHHHHhhccceEEEEEecC----------C
25702 Confidence 443 25777777766667788999998888753 4567766543322110000001111111111000 0
25703
25704
25705 Q NP_000836.2 347 SRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG 426 (908)
25706 Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~ 426 (908)
25707 .........+.+.+++.+. .|...... ...+..++..+|||++++++|++++....+..
25708 T Consensus 269 ---~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~----~~~~~~~~~~~ydav~~~~~al~~~~~~~~~~ 327 (688)
25709 T 5L2E_B 269 ---VPQNISQRCFRGNHRISST--------------LCDPKDPF----AQNMEISNLYIYDTVLLLANAFHKKLQDRKWH 327 (688)
25710 T ss_dssp ---CCCSSGGGSEETTEECCHH--------------HHCTTSHH----HHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCC
25711 T ss_pred ---CCchhhhhccccCcccCCC--------------cCCCCCCc----cccccchHHHHHHHHHHHHHHHHHHHHcCCCC
25712 Confidence 0000111112222222111 11000000 01234567789999999999999986543210
25713
25714
25715 Q NP_000836.2 427 --YIGLCPRM---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDA-PGRYDIFQYQITN-KSTEYKVIGHWTNQL 495 (908)
25716 Q Consensus 427 --~~~~~~~~---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~-~~~~~i~~~~~~~-~~~~~~~Vg~~~~~~ 495 (908)
25717 ....|... ...++..+.++|++.+|.|.+| .+.|+++|++ ...+.+++++... +...++.||.|....
25718 T Consensus 328 ~~~~~~c~~~~~~~~~~~~~l~~~l~~~~~~g~~G-~v~f~~~g~~~~~~~~i~~~~~~~~~~~~~~~vg~~~~~~ 402 (688)
25719 T 5L2E_B 328 SMASLSCIRKNSKPWQGGRSMLETIKKGGVNGLTG-DLEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVT 402 (688)
25720 T ss_dssp CCCCCCSSSTTCCCCTTHHHHHHHHHTCEEECSSS-EEECCTTSBCCCCCEEEEEC--------CCEEEEEEETTT
25721 T ss_pred CCCCcccccCCCCCCccchHHHHHHHhCccccccc-eEEecCCCccceeEEEEEecCCCcccCCcEEEEEEEeCCC
25722 Confidence 01122111 0114556778888889999988 8999999985 4678888887421 235789999998764
25723
25724
25725 No 64
25726 >3QEK_B NMDA glutamate receptor subunit; amino terminal domain, ion channel; HET: MSE, NAG, BMA; 2.001A {Xenopus laevis}
25727 Probab=99.57 E-value=1.3e-19 Score=195.07 Aligned_cols=349 Identities=18% Similarity=0.255 Sum_probs=220.0 Template_Neff=11.900
25728
25729 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
25730 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
25731 +++++||+++|.+ ....|+++|++++|+.+ .++++++++...|+..++..+ .+.+.+
25732 T Consensus 3 ~~~i~Ig~~~~~~------------------~~~~~~~~a~~~~n~~~-~~~~~~l~~~~~~~~~~~~~~----~~~~~~ 59 (384)
25733 T 3QEK_B 3 PKIVNIGAVLSTK------------------KHEQIFREAVNQANKRH-FTRKIQLQATSVTHRPNAIQM----ALSVCE 59 (384)
25734 T ss_dssp CCEEEEEEEESSH------------------HHHHHHHHHHHHHHHHC-----CEEEEEEEECCSSHHHH----HHHCCC
25735 T ss_pred CcceEEEEEechH------------------HHHHHHHHHHHHHhHhh-cCCCeeEEEEEecCCcCHHHH----HHHHHH
25736 Confidence 4689999999875 24578999999999864 345777777665544443222 222222
25737
25738
25739 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAA-----ASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
25740 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~-----~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
25741 ++. .+++++++|+. ++..+..++.++...++|+|++.+..+.+.+...+++++++.|
25742 T Consensus 60 ~~~------------------~~~v~~vig~~~~~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~ 121 (384)
25743 T 3QEK_B 60 DLI------------------SSQVYAILVSHPPAPTDHLTPTPISYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVP 121 (384)
25744 T ss_dssp CCG------------------GGTEEEEEECCC-------CCHHHHHHHHTTTCCEEESSCCCGGGGCSSSCTTEEESSC
25745 T ss_pred HHH------------------hcCcEEEEECCCCCCCCcCChHHHHHHHHhhCCCEEEccCCCccccCccccceEeecCC
25746 Confidence 221 15788999953 3344456677888899999998877666554335688999999
25747
25748
25749 Q NP_000836.2 198 PDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQS-------QKIP------------REPR 258 (908)
25750 Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-------~~~~------------~~~~ 258 (908)
25751 +....+.++++++.+++|+++++++.++.++....+.+++.+++. ++++... ..+. ....
25752 T Consensus 122 ~~~~~~~~~~~~~~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (384)
25753 T 3QEK_B 122 PYSHQALVWFEMMRLFNWNHVILIVSDDHEGRAAQKKLETLLEGK-ESKSKKRNYENLDQLSYDNKRGPKADKVLQFEPG 200 (384)
25754 T ss_dssp CGGGGHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHH-HHHHHHHTC-------------CEEEEEEEECTT
25755 T ss_pred CHHHHHHHHHHHHHHcCCcEEEEEEecCcchhHHHHHHHHHHhcC-CCccccccccccccccccCCCCCCccceeecCCC
25756 Confidence 998889999999988899999999987778887778888777765 3442110 0000 0011
25757
25758
25759 Q NP_000836.2 259 PGEFEKIIKRLLETPNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRAS 337 (908)
25760 Q Consensus 259 ~~~~~~~~~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 337 (908)
25761 ..++...+++++. .++|+|++.........+++++++.|+.+ ++.|+..+.+..... ......+.
25762 T Consensus 201 ~~~~~~~~~~i~~-~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~--------- 266 (384)
25763 T 3QEK_B 201 TKNLTALLLEAKE-LEARVIILSASEDDATAVYKSAAMLDMTGAGYVWLVGEREISGSA----LRYAPDGI--------- 266 (384)
25764 T ss_dssp CCCCHHHHHHHHT-SSCCEEEEECCHHHHHHHHHHHHHTTCSSTTCEEEECSGGGSHHH----HHHCCTTC---------
25765 T ss_pred chhHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHcCCCCCCEEEEEeccccCCch----hhcCCCcE---------
25766 Confidence 2345566777763 57899888877777788889888887753 456665543221100 00000000
25767
25768
25769 Q NP_000836.2 338 IDGFDRYFRSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALH 417 (908)
25770 Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~ 417 (908)
25771 +... ...+..++..+|||+++++++++
25772 T Consensus 267 -----------------------------~~~~------------------------~~~~~~~~~~~ydav~~~~~al~ 293 (384)
25773 T 3QEK_B 267 -----------------------------IGLQ------------------------LINGKNESAHISDAVAVVAQAIH 293 (384)
25774 T ss_dssp -----------------------------EEEE------------------------ETTTTCHHHHHHHHHHHHHHHHH
25775 T ss_pred -----------------------------EEEE------------------------ecCCCcchhHHHHHHHHHHHHHH
25776 Confidence 0000 00112356789999999999999
25777
25778
25779 Q NP_000836.2 418 NMHKDLCPG-YIGLCPRM--STIDGKELLGYIRA-VNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWT 492 (908)
25780 Q Consensus 418 ~~~~~~~~~-~~~~~~~~--~~~~~~~l~~~l~~-~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~ 492 (908)
25781 ++....+.. ....|... ....+..+.+.|++ ..|.|.+| ++.||++|++. ..+.+++++ ++.++.+|.|+
25782 T Consensus 294 ~~~~~~~~~~~~~~c~~~~~~~~~~~~l~~~l~~~~~~~g~~G-~i~fd~~g~~~~~~~~i~~~~----~~~~~~vg~~~ 368 (384)
25783 T 3QEK_B 294 ELFEMENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGVTG-RIEFNEDGDRKFAQYSIMNLQ----NRKLVQVGIFN 368 (384)
25784 T ss_dssp HHTTSSCCCCCCSCCTTCCCCCTTHHHHHHHHHTCCEEEETTE-EECBCTTSCBCSCCEEEEEEE----TTEEEEEEEEC
25785 T ss_pred HHHhcCCCCCCCCCcCCCcchhccHHHHHHHHhcCCCCCCCCC-CEEECCCCCcCceEEEEEEcc----CCeEEEEEEEe
25786 Confidence 986532110 01122111 11234556677765 56889888 89999999986 688888887 35799999998
25787
25788
25789 Q NP_000836.2 493 NQL-HLKVEDMQWA 505 (908)
25790 Q Consensus 493 ~~~-~~~~~~i~w~ 505 (908)
25791 ... .++...+.|+
25792 T Consensus 369 ~~~~~~~~~~~~w~ 382 (384)
25793 T 3QEK_B 369 GSYIIQNDRKIIWP 382 (384)
25794 T ss_dssp SSSEEECSSCCCCT
25795 T ss_pred CCccccCCCcccCC
25796 Confidence 652 2233457774
25797
25798
25799 No 65
25800 >6LU9_D Glutamate receptor ionotropic, delta-2; Membrane protein;{Rattus norvegicus}
25801 Probab=99.57 E-value=1.3e-19 Score=217.96 Aligned_cols=374 Identities=16% Similarity=0.230 Sum_probs=233.0 Template_Neff=11.400
25802
25803 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRI-LDTCSRDTYALEQSLTFVQA 122 (908)
25804 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~-~d~~~~~~~a~~~~~~~~~~ 122 (908)
25805 ++++||+++|.++ .....|+++|++++|+++++++|+++++.+ .|+++++..+.+. +.+
25806 T Consensus 2 ~~i~IG~~~p~~g----------------~~~~~~~~~Ai~~in~~~~~~~g~~i~~~~~~d~~~~~~~~~~~----~~~ 61 (877)
25807 T 6LU9_D 2 SIIHIGAIFDESA----------------KKDDEVFRTAVGDLNQNEEILQTEKITFSVTFVDGNNPFQAVQE----ACE 61 (877)
25808 T ss_dssp CSSEEEEEECTTT----------------HHHHHHHHHHHHHHHTCCSSCSSCCCEEEEEECCTTCHHHHHHH----HHH
25809 T ss_pred CeEEEEEEeccCc----------------cchHHHHHHHHHHHHccccccccccceeEEEEcCCCCHHHHHHH----HHH
25810 Confidence 5789999999864 246789999999999988777789999988 8887765443333 333
25811
25812
25813 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAP-------ELSDNTRYDFFSRV 195 (908)
25814 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~-------~l~~~~~~~~~~~~ 195 (908)
25815 ++. +++++++|+.++..+..++..+...++|++++.++.+ .+++...++++++.
25816 T Consensus 62 l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 122 (877)
25817 T 6LU9_D 62 LMN-------------------QGILALVSSIGCTSAGSLQSLADAMHIPHLFIQRSTAGTPRSGCGLTRSNRNDDYTLS 122 (877)
25818 T ss_dssp HHH-------------------HCCSCEEEEECHHHHHHHHHHHHHHTCCEEEEECCGGGCCCCCCSCCSCTTSCCCEEE
25819 T ss_pred HHH-------------------cCeeEEEecCChhhHHHHHHHHHHcCCCEEEeecCCCCCCCCCCCcccCCCCCCeEEE
25820 Confidence 332 5789999998887777888889999999999877655 34333456788888
25821
25822
25823 Q NP_000836.2 196 VPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEF--------EKIIK 267 (908)
25824 Q Consensus 196 ~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~--------~~~~~ 267 (908)
25825 .+++..+++++++++++++|+++++++ +++++....+.+.+.+++. ++++.....++. +..++ ...++
25826 T Consensus 123 ~~~~~~~~~~l~~~l~~~~~~~v~il~-~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~--~~~~~~~~~~~~~~~~l~ 198 (877)
25827 T 6LU9_D 123 VRPPVYLNEVILRVVTEYAWQKFIIFY-DSEYDIRGIQEFLDKVSQQ-GMDVALQKVENN--INKMITTLFDTMRIEELN 198 (877)
25828 T ss_dssp CSCCCCHHHHHHHHHHHTTCSEEEEEE-CTTSCGGGSHHHHHHHHHT-TCEEEEEECCSS--HHHHHHHHHHHSCHHHHH
25829 T ss_pred ecCChhHHHHHHHHHHHhCCcEEEEEE-cCcccHHHHHHHHHHHHhc-CCceeEeecccc--hhHhHHHHHhhhcHHHHH
25830 Confidence 888777888999998888999999999 7778877778888877765 355543322221 11111 12233
25831
25832
25833 Q NP_000836.2 268 RLLETPNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFR 346 (908)
25834 Q Consensus 268 ~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 346 (908)
25835 ++. .++|+|++......+..+++++++.|+.. .+.|+..+.+...............+........ .
25836 T Consensus 199 ~~~--~~~~~ii~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 266 (877)
25837 T 6LU9_D 199 RYR--DTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTF----------P 266 (877)
25838 T ss_dssp HHH--HHTTEEEEESCHHHHHHHHHHHHHTTSSCSSCEEEEECSCCCHHHHHHHHHHCSSEEEEEEEEC----------C
25839 T ss_pred HhH--HhCCeEEEEcCHHHHHHHHHHHHHcCCccCceEEEEEeCCcccccHHHHhhhhcccEEEEEecc----------C
25840 Confidence 332 36788887777777888999999888753 4567766543321110000000111111110000 0
25841
25842
25843 Q NP_000836.2 347 SRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG 426 (908)
25844 Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~ 426 (908)
25845 .........+.+.+++.+. .|...+.. ...+..++..+|||++++++|++++....+..
25846 T Consensus 267 ---~~~~~~~~~f~~~~~~~~~--------------~~~~~~~~----~~~~~~~~~~~ydav~~~~~al~~~~~~~~~~ 325 (877)
25847 T 6LU9_D 267 ---VPQNISQRCFRGNHRISST--------------LCDPKDPF----AQNMEISNLYIYDTVLLLANAFHKKLQDRKWH 325 (877)
25848 T ss_dssp ---CCSSHHHHHEETTEECCTT--------------TSCTTSHH----HHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCC
25849 T ss_pred ---CCcccccccccccccccCC--------------cCCCCCCc----ccccchhHHHHHHHHHHHHHHHHHHHHcCCcc
25850 Confidence 0000011112222221111 01000000 01234567889999999999999886532110
25851
25852
25853 Q NP_000836.2 427 --YIGLCPRM---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDA-PGRYDIFQYQITN-KSTEYKVIGHWTNQ 494 (908)
25854 Q Consensus 427 --~~~~~~~~---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~-~~~~~i~~~~~~~-~~~~~~~Vg~~~~~ 494 (908)
25855 ....|... ...++..+.+++++..|.|.+| .+.||++|++ ...+.+++++..+ ..+.+..||.|...
25856 T Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~~ 399 (877)
25857 T 6LU9_D 326 SMASLSCIRKNSKPWQGGRSMLETIKKGGVNGLTG-DLEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPV 399 (877)
25858 T ss_dssp CCCCCCSSSTTCCCCHHHHHHHHHHHTCEEECSSS-EEECCTTSBCCCCEEEEEEEEEEETTEEEEEEEEEEETT
25859 T ss_pred ccccccccCCCCCccccchHHHHHHHhcccCceee-eEEcCCCCCcccEEEEEEecccccccCCcEEEEEEEeCC
25860 Confidence 00112110 1124566888888889999998 8999999998 4688888887421 12468888988754
25861
25862
25863 No 66
25864 >1USG_A LEUCINE-SPECIFIC BINDING PROTEIN; LEUCINE-BINDING PROTEIN, PROTEIN STRUCTURE, ABC; 1.53A {ESCHERICHIA COLI} SCOP: c.93.1.1
25865 Probab=99.56 E-value=2.1e-19 Score=190.09 Aligned_cols=335 Identities=20% Similarity=0.239 Sum_probs=214.3 Template_Neff=12.300
25866
25867 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
25868 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
25869 ++++||+++|.++... ..+.....+++.|++++|+.+++. |+++++.+.|+.+++.. ..+.++++
25870 T Consensus 1 ~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~~~~~~~~-g~~i~~~~~~~~~~~~~----~~~~~~~l 65 (346)
25871 T 1USG_A 1 DDIKVAVVGAMSGPIA----------QWGDMEFNGARQAIKDINAKGGIK-GDKLVGVEYDDACDPKQ----AVAVANKI 65 (346)
25872 T ss_dssp CCEEEEEEECSSSTTH----------HHHHHHHHHHHHHHHHHHHTTTBT-TBCEEEEEEECTTCHHH----HHHHHHHH
25873 T ss_pred CCeEEEEEecCCCCch----------hhhHHHHHHHHHHHHHHHHCCCCC-CceEEEEEEcCCCCHHH----HHHHHHHH
25874 Confidence 3689999999775321 255678899999999999876543 67788888776655332 23334433
25875
25876
25877 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
25878 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
25879 +. ++++++|++.++.....+...+...++|+|.+....+.+... .+++++++.+++...+
25880 T Consensus 66 ~~-------------------~~v~~ii~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 125 (346)
25881 T 1USG_A 66 VN-------------------DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR-GYQHIMRTAGLDSSQG 125 (346)
25882 T ss_dssp HH-------------------TTCCEEECCSSHHHHHHHHHHHHHHTCEEEECCCCCGGGGSS-CCSSEEECSCCGGGHH
25883 T ss_pred Hh-------------------CCCCEEEcCCCchhhHHHHHHHHHhCCEEEecCCCCHHHHhc-CCCceEEecCChhhhH
25884 Confidence 32 478889988776665566677788899999987665544322 3567888888888888
25885
25886
25887 Q NP_000836.2 204 QAMVDIV-TALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFA 282 (908)
25888 Q Consensus 204 ~~~~~~l-~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~ 282 (908)
25889 +.+++++ ++.+|+++++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .++|++++..
25890 T Consensus 126 ~~~~~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~i~~~~ 201 (346)
25891 T 1USG_A 126 PTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAA-NANVVFFDGIT--AGEKDFSALIARLKK-ENIDFVYYGG 201 (346)
25892 T ss_dssp HHHHHHCCCCCCCSSEEEEECSSHHHHHHHHHHHHHHHHT-TCCEEEEEECC--TTCCCCHHHHHHHHH-TTCCEEEEES
25893 T ss_pred HHHHHHHHHhhCCCEEEEEEcCCccchhHHHHHHHHHHHC-CCeEeEEeccC--CCCCChHHHHHHHHH-CCCCEEEEec
25894 Confidence 8889887 45689999999976667778888888888775 35554322222 122345556666653 5788888776
25895
25896
25897 Q NP_000836.2 283 NEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAEF 362 (908)
25898 Q Consensus 283 ~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (908)
25899 .+..+..+++++++.|+ ++.|++.+.+...... ........+.+...+.. +...+....|.+.
25900 T Consensus 202 ~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------------~~~~~~~~~f~~~ 264 (346)
25901 T 1USG_A 202 YYPEMGQMLRQARSVGL--KTQFMGPEGVGNASLS-NIAGDAAEGMLVTMPKR--------------YDQDPANQGIVDA 264 (346)
25902 T ss_dssp CHHHHHHHHHHHHHTTC--CCEEEECGGGCCTTHH-HHHGGGGTTCEEEECCC--------------GGGSGGGHHHHHH
25903 T ss_pred ChHHHHHHHHHHHHcCC--CCeEEcCcccccHHHH-HHHchhhcCcEEEcCCC--------------cCCChhHHHHHHH
25904 Confidence 55567788888888877 3567766543322110 00011122222111100 0001111222222
25905
25906
25907 Q NP_000836.2 363 WEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKEL 442 (908)
25908 Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~~l 442 (908)
25909 +++.+. ..+..++..+|||++++++++++.... +++.+
25910 T Consensus 265 ~~~~~~---------------------------~~~~~~~~~~yda~~~~~~a~~~~~~~---------------~~~~i 302 (346)
25911 T 1USG_A 265 LKADKK---------------------------DPSGPYVWITYAAVQSLATALERTGSD---------------EPLAL 302 (346)
25912 T ss_dssp HHHTTC---------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCC---------------CHHHH
25913 T ss_pred HHHhhC---------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCC---------------CHHHH
25914 Confidence 222111 112345778999999999999886531 34467
25915
25916
25917 Q NP_000836.2 443 LGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQ 477 (908)
25918 Q Consensus 443 ~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~ 477 (908)
25919 .+.|++..|.|.+| ++.||++|++. ..+.+++++
25920 T Consensus 303 ~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~i~~~~ 337 (346)
25921 T 1USG_A 303 VKDLKANGANTVIG-PLNWDEKGDLKGFDFGVFQWH 337 (346)
25922 T ss_dssp HHHHHHHCEEETTE-EECBCTTSSBSSCCCEEEEEC
25923 T ss_pred HHHHHhCCCCccCc-ceeeCCCCCcCcccEEEEEEe
25924 Confidence 78888888999999 89999988876 467777776
25925
25926
25927 No 67
25928 >3IP6_A ABC transporter, substrate binding protein; VENUS FLYTRAP DOMAIN, TRANSPORT PROTEIN; 1.4A {Agrobacterium tumefaciens}
25929 Probab=99.55 E-value=2.6e-19 Score=190.40 Aligned_cols=349 Identities=15% Similarity=0.188 Sum_probs=218.3 Template_Neff=12.000
25930
25931 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
25932 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
25933 ++++||+++|.++.. ...+.....+++.|++++|+.+++. |+++++.+.|+..++. ...+.++++
25934 T Consensus 1 ~~~~Ig~i~~~~~~~----------~~~~~~~~~g~~~a~~~~n~~~~~~-g~~i~~~~~~~~~~~~----~~~~~~~~l 65 (356)
25935 T 3IP6_A 1 MDVVIAVGAPLTGPN----------AAFGAQIQKGAEQAAKDINAAGGIN-GEQIKIVLGDDVSDPK----QGISVANKF 65 (356)
25936 T ss_dssp CCEEEEEEECSSSTT----------HHHHHHHHHHHHHHHHHHHHTTCBT-TBCEEEEEEECTTCHH----HHHHHHHHH
25937 T ss_pred CcEEEEEEecCCCCC----------hHHHHHHHHHHHHHHHHHHHcCCcC-CceeEEEEecCCCCHH----HHHHHHHHH
25938 Confidence 368999999976532 1256678899999999999876543 6778887777655433 223334443
25939
25940
25941 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
25942 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
25943 +. ++++++|++.++.....+...+...++|+|.+....+.+... ..++++++.++....+
25944 T Consensus 66 ~~-------------------~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 125 (356)
25945 T 3IP6_A 66 VA-------------------DGVKFVVGHFNSGVSIPASEVYAENGILEITPAATNPVFTER-GLWNTFRTCGRDDQQG 125 (356)
25946 T ss_dssp HH-------------------TTCCEEEECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSS-CCTTEEESSCCHHHHH
25947 T ss_pred HH-------------------CCCCEEEecCCchhhHHHHHHHHHcCCEEEccCCCChhhhcc-CCcCeEEecCChhHHH
25948 Confidence 32 478889987766655566677788899999988765543322 2356788888888888
25949
25950
25951 Q NP_000836.2 204 QAMVDIV-TALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFA 282 (908)
25952 Q Consensus 204 ~~~~~~l-~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~ 282 (908)
25953 +.+++++ ++++|+++++++.++.++..+.+.+++.+++. ++++.....+. .+..+....++++++ .+++++++..
25954 T Consensus 126 ~~~~~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~i~~~~ 201 (356)
25955 T 3IP6_A 126 GIAGKYLADHFKDAKVAIIHDKTPYGQGLADETKKAANAA-GVTEVMYEGVN--VGDKDFSALISKMKE-AGVSIIYWGG 201 (356)
25956 T ss_dssp HHHHHHHHHHCTTCCEEEEECSSHHHHHHHHHHHHHHHHT-TCCCSEEEECC--TTCCCCHHHHHHHHH-TTCCEEEEES
25957 T ss_pred HHHHHHHHHhcCCCeEEEEeCCChhhHHHHHHHHHHHHHC-CCeeeEeeccC--CCCCChHHHHHHHHH-hCCCEEEEeC
25958 Confidence 8888888 45699999999976667777888888888775 35543322222 122344555666653 4778877776
25959
25960
25961 Q NP_000836.2 283 NEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAEF 362 (908)
25962 Q Consensus 283 ~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (908)
25963 .+..+..+++++++.|+. ..|++.+.+...... ........+.+..... . +...+....|.+.
25964 T Consensus 202 ~~~~~~~~~~~~~~~g~~--~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~---~~~~~~~~~f~~~ 264 (356)
25965 T 3IP6_A 202 LHTEAGLIIRQAADQGLK--AKLVSGDGIVSNELA-SIAGDAVEGTLNTFGP-----------D---PTLRPENKELVEK 264 (356)
25966 T ss_dssp CHHHHHHHHHHHHHHTCC--CEEEECTTCCSHHHH-HHHGGGGTTCEEEECC-----------C---GGGCGGGHHHHHH
25967 T ss_pred chHHHHHHHHHHHHCCCC--CeEEEcccccCHHHH-HHHhHHhcCceeecCC-----------C---cccChhHHHHHHH
25968 Confidence 566778888988888774 356665543221110 0001112222211100 0 0001111222222
25969
25970
25971 Q NP_000836.2 363 WEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKEL 442 (908)
25972 Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~~l 442 (908)
25973 +++ +. ..+..++..+|||++++++++++... .++..+
25974 T Consensus 265 ~~~-~~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~---------------~~~~~l 301 (356)
25975 T 3IP6_A 265 FKA-AG---------------------------FNPEAYTLYSYAAMQAIAGAAKAAGS---------------VEPEKV 301 (356)
25976 T ss_dssp HHH-TT---------------------------CCCCTTHHHHHHHHHHHHHHHHHHTC---------------CCHHHH
25977 T ss_pred HHH-hC---------------------------CCCChHHHHHHHHHHHHHHHHHHcCC---------------CCHHHH
25978 Confidence 221 10 11234567899999999999987642 134567
25979
25980
25981 Q NP_000836.2 443 LGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTN 493 (908)
25982 Q Consensus 443 ~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~ 493 (908)
25983 .+.|++..|.|.+| .+.||++|++. ..+.+.+++... ++.|+.++.|..
25984 T Consensus 302 ~~~l~~~~~~g~~g-~i~f~~~g~~~~~~~~i~~~~~~~-~g~~~~~~~~~~ 351 (356)
25985 T 3IP6_A 302 AEALKKGSFPTALG-EISFDEKGDPKLPGYVMYEWKKGP-DGKFTYIQQGSH 351 (356)
25986 T ss_dssp HHHHTTCCBCCTTS-SBCBCTTSCBCCCCCEEEEEEECT-TSSEEEEEC---
25987 T ss_pred HHHHHcCCCCcCce-eEEECCCCCccCCeEEEEEEEeCC-CCcEEEEecCCC
25988 Confidence 78888888999888 89999989875 467787876321 357888887753
25989
25990
25991 No 68
25992 >3IPC_A ABC transporter, substrate binding protein; VENUS FLYTRAP DOMAIN, TRANSPORT PROTEIN; 1.3A {Agrobacterium tumefaciens}
25993 Probab=99.55 E-value=2.7e-19 Score=190.15 Aligned_cols=348 Identities=16% Similarity=0.198 Sum_probs=218.0 Template_Neff=12.100
25994
25995 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
25996 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
25997 +++||+++|.++.. ...+.....+++.|++++|+.+++. |+++++.+.|+..++. ...+.+++++
25998 T Consensus 2 ~~~Ig~~~~~~~~~----------~~~~~~~~~~~~~a~~~~n~~~~~~-g~~i~~~~~~~~~~~~----~~~~~~~~l~ 66 (356)
25999 T 3IPC_A 2 DVVIAVGAPLTGPN----------AAFGAQIQKGAEQAAKDINAAGGIN-GEQIKIVLGDDVSDPK----QGISVANKFV 66 (356)
26000 T ss_dssp CEEEEEEECCSSTT----------HHHHHHHHHHHHHHHHHHHHTTCBT-TBCEEEEEEECTTCHH----HHHHHHHHHH
26001 T ss_pred CeEEEEEeCCCCCc----------hHHHHHHHHHHHHHHHHHHHCCCcC-CceeEEEEecCCCCHH----HHHHHHHHHH
26002 Confidence 67899999977532 1356778899999999999876543 6778887777655533 2233344333
26003
26004
26005 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
26006 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
26007 . ++++++|++.++.....+...+...++|+|.+.+..+.+... ..++++++.++....++
26008 T Consensus 67 ~-------------------~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 126 (356)
26009 T 3IPC_A 67 A-------------------DGVKFVVGHANSGVSIPASEVYAENGILEITPAATNPVFTER-GLWNTFRTCGRDDQQGG 126 (356)
26010 T ss_dssp H-------------------TTCCEEEECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSS-CCTTEEESSCCHHHHHH
26011 T ss_pred h-------------------CCCCEEEccCCchhhHHHHHHHHHcCCEEEecCCCChhhhcc-CCCCeEEecCChhHHHH
26012 Confidence 2 478899988766655566677788899999987655543321 24567888888888888
26013
26014
26015 Q NP_000836.2 205 AMVDIV-TALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFAN 283 (908)
26016 Q Consensus 205 ~~~~~l-~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~~ 283 (908)
26017 .+++++ ++++|++|++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .+++++++...
26018 T Consensus 127 ~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ii~~~~ 202 (356)
26019 T 3IPC_A 127 IAGKYLADHFKDAKVAIIHDKTPYGQGLADETKKAANAA-GVTEVMYEGVN--VGDKDFSALISKMKE-AGVSIIYWGGL 202 (356)
26020 T ss_dssp HHHHHHHHHCTTCCEEEEECSSHHHHHHHHHHHHHHHHT-TCCCSEEEECC--TTCCCCHHHHHHHHH-TTCCEEEEESC
26021 T ss_pred HHHHHHHHhcCCCEEEEEECCChhhHhHHHHHHHHHHHC-CCeEeEEEccC--CCCcCHHHHHHHHHH-cCCCEEEEeCc
26022 Confidence 888887 45699999999966667777888888887765 35544322222 122344556666653 47888777765
26023
26024
26025 Q NP_000836.2 284 EDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAEFW 363 (908)
26026 Q Consensus 284 ~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (908)
26027 +..+..+++++++.|+. ..|++.+.+...... ........+.+..... . +...+....|.+.+
26028 T Consensus 203 ~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~---~~~~~~~~~f~~~~ 265 (356)
26029 T 3IPC_A 203 HTEAGLIIRQAADQGLK--AKLVSGDGIVSNELA-SIAGDAVEGTLNTFGP-----------D---PTLRPENKELVEKF 265 (356)
26030 T ss_dssp HHHHHHHHHHHHHHTCC--CEEEECGGGCSHHHH-HHHGGGGTTCEEEESC-----------C---GGGCGGGHHHHHHH
26031 T ss_pred hHHHHHHHHHHHHCCCC--CeEEechhhcCHHHH-HHhhHHhcCceeecCC-----------C---CCCChhHHHHHHHH
26032 Confidence 66677889998888874 356665533221110 0001112222211100 0 00001111122222
26033
26034
26035 Q NP_000836.2 364 EENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKELL 443 (908)
26036 Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~~l~ 443 (908)
26037 ++. . ..+..++..+|||++++++++++... .++..+.
26038 T Consensus 266 ~~~-~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~---------------~~~~~l~ 302 (356)
26039 T 3IPC_A 266 KAA-G---------------------------FNPEAYTLYSYAAMQAIAGAAKAAGS---------------VEPEKVA 302 (356)
26040 T ss_dssp HHT-T---------------------------CCCCTTHHHHHHHHHHHHHHHHHHTC---------------CCHHHHH
26041 T ss_pred HHc-C---------------------------CCCchHHHHHHHHHHHHHHHHHHcCC---------------CCHHHHH
26042 Confidence 110 0 01234567899999999999987642 1345677
26043
26044
26045 Q NP_000836.2 444 GYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTN 493 (908)
26046 Q Consensus 444 ~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~ 493 (908)
26047 ++|++..|.|.+| ++.||++|++. ..+.+.+++..+ ++.++.++.|+.
26048 T Consensus 303 ~~l~~~~~~g~~G-~i~f~~~g~~~~~~~~i~~~~~~~-~g~~~~~~~~~~ 351 (356)
26049 T 3IPC_A 303 EALKKGSFPTALG-EISFDEKGDPKLPGYVMYEWKKGP-DGKFTYIQQGSH 351 (356)
26050 T ss_dssp HHHTTCCBCCTTS-SBCBCTTSCBCCCCCEEEEEEECT-TSSEEEEEC---
26051 T ss_pred HHHHcCCCCccce-EEEECCCCCccCCeEEEEEEEECC-CccEEEEecCCC
26052 Confidence 8888888999888 89999989875 467787886321 357888887764
26053
26054
26055 No 69
26056 >4EYG_B Twin-arginine translocation pathway signal; PSI-BIOLOGY, MCSG, MIDWEST CENTER FOR; HET: VNL, MSE; 1.86A {Rhodopseudomonas palustris}
26057 Probab=99.55 E-value=3.1e-19 Score=190.67 Aligned_cols=356 Identities=16% Similarity=0.187 Sum_probs=222.9 Template_Neff=12.100
26058
26059 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
26060 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
26061 ..++++||++.|.++... ..+.....+++.|++++|.. ..|+++++.+.|+.+++. ...+.++
26062 T Consensus 3 ~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~~~~---~~g~~v~~~~~d~~~~~~----~~~~~~~ 65 (368)
26063 T 4EYG_B 3 AEDTFKVGLIVPMTGGQA----------STGKQIDNAIKLYIKKHGDT---VAGKKIEVILKDDAAIPD----NTKRLAQ 65 (368)
26064 T ss_dssp -CCEEEEEEEECSSSTTH----------HHHHHHHHHHHHHHHHHCSE---ETTEEEEEEEEECTTCHH----HHHHHHH
26065 T ss_pred CCCcEEEEEEEcCCCCCh----------HHHHHHHHHHHHHHHHhCCc---cCCEEEEEEEEcCCCCch----HHHHHHH
26066 Confidence 457899999999876421 25567888999999998851 235677877777655533 2233344
26067
26068
26069 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
26070 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
26071 +++. .++++++|++..+.....+...+...++|+|.+....+.+.. .+++++++.+++..
26072 T Consensus 66 ~l~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~~~~ 125 (368)
26073 T 4EYG_B 66 ELIV------------------NDKVNVIAGFGITPAALAAAPLATQAKVPEIVMAAGTSIITE--RSPYIVRTSFTLAQ 125 (368)
26074 T ss_dssp HHHH------------------TSCCSEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGGG--GCTTEEESSCCHHH
26075 T ss_pred HHHh------------------cCCcCEEEecCChHHHHHHHHHHHHcCCCEEEcCCCCccccC--CCCcEEEcCCChhh
26076 Confidence 4332 157889998876666566667778899999988765543322 24678888898888
26077
26078
26079 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
26080 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
26081 .++.+++++.+.+|+++++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .++|++++.
26082 T Consensus 126 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~i~~~ 201 (368)
26083 T 4EYG_B 126 SSIIIGDWAAKNGIKKVATLTSDYAPGNDALAFFKERFTAG-GGEIVEEIKVP--LANPDFAPFLQRMKD-AKPDAMFVF 201 (368)
26084 T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEEC--SSSCCCHHHHHHHHH-HCCSEEEEE
26085 T ss_pred hHHHHHHHHHHCCCCEEEEEecCChhhHHHHHHHHHHHHhC-CCeeceEEecC--CCCCCcHHHHHHHHH-hCCCEEEEE
26086 Confidence 88899999877899999999966667777888888888765 35543322222 122344556666653 578888877
26087
26088
26089 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
26090 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
26091 .....+..+++++++.|+.. ++.|++.+.+...... ........+.+...... . ....+....|.
26092 T Consensus 202 ~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~f~ 267 (368)
26093 T 4EYG_B 202 VPAGQGGNFMKQFAERGLDKSGIKVIGPGDVMDDDLL-NSMGDAALGVVTAHMYS----------A---AHPSAMNKEFV 267 (368)
26094 T ss_dssp CCTTCHHHHHHHHHHTTGGGTTCEEEEEGGGGCTTTG-GGCCGGGTTCEEEESCC----------T---TCCCHHHHHHH
26095 T ss_pred eccchHHHHHHHHHHcCCCcCCCEEEccccccCHHHH-HHchhhhCCcEEEeccc----------C---CCCCHHHHHHH
26096 Confidence 65466778888888888753 3566665533221110 00111122222211100 0 00001111222
26097
26098
26099 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
26100 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
26101 +.+++.++ ..+..++..+|||++++++++++.... .+++
26102 T Consensus 268 ~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~a~~~~~~~--------------~~~~ 306 (368)
26103 T 4EYG_B 268 AAYKKEFG---------------------------QRPGFMAVGGYDGIHLVFEALKKTGGK--------------ADGD 306 (368)
26104 T ss_dssp HHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHTTTC--------------CSHH
26105 T ss_pred HHHHHHHC---------------------------CCCChHHHHHHHHHHHHHHHHHHhCCC--------------CCHH
26106 Confidence 22222111 112345778999999999999886421 2345
26107
26108
26109 Q NP_000836.2 441 ELLGYIRAVNFNGSAGTPVTFNEN-GDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
26110 Q Consensus 441 ~l~~~l~~~~f~G~~G~~v~Fd~~-G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
26111 .+.++|++.+|.|.+| ++.|+++ |++...+.+.+++..++...++.+|.|...
26112 T Consensus 307 ~v~~~l~~~~~~g~~G-~~~f~~~~~~~~~~~~i~~~~~~~g~~~~~~vg~~~~~ 360 (368)
26113 T 4EYG_B 307 SLIAAMKGMKWESPRG-PISIDPETRDIVQNIYIRKVEKVDGELYNIEFAKFDAV 360 (368)
26114 T ss_dssp HHHHHHTTCEEEETTE-EEEECTTTCCEEEEEEEEEEEEETTEEEEEEEEEEEEE
26115 T ss_pred HHHHHHhCCCccCCCc-ceEeCCCCCcccceEEEEEEEeeCCeEEEeEEEEecCC
26116 Confidence 6778888778999888 8999975 566667888888732223457888888754
26117
26118
26119 No 70
26120 >4EYK_A Twin-arginine translocation pathway signal; PSI-BIOLOGY, MCSG, MIDWEST CENTER FOR; HET: DHB; 1.9A {Rhodopseudomonas palustris}
26121 Probab=99.55 E-value=3.1e-19 Score=190.67 Aligned_cols=356 Identities=16% Similarity=0.187 Sum_probs=222.9 Template_Neff=12.100
26122
26123 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
26124 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
26125 ..++++||++.|.++... ..+.....+++.|++++|.. ..|+++++.+.|+.+++. ...+.++
26126 T Consensus 3 ~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~~~~---~~g~~v~~~~~d~~~~~~----~~~~~~~ 65 (368)
26127 T 4EYK_A 3 AEDTFKVGLIVPMTGGQA----------STGKQIDNAIKLYIKKHGDT---VAGKKIEVILKDDAAIPD----NTKRLAQ 65 (368)
26128 T ss_dssp -CCEEEEEEEECSSSTTH----------HHHHHHHHHHHHHHHHHCSE---ETTEEEEEEEEECTTCHH----HHHHHHH
26129 T ss_pred CCCcEEEEEEEcCCCCCh----------HHHHHHHHHHHHHHHHhCCc---cCCEEEEEEEEcCCCCch----HHHHHHH
26130 Confidence 457899999999876421 25567888999999998851 235677877777655533 2233344
26131
26132
26133 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
26134 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
26135 +++. .++++++|++..+.....+...+...++|+|.+....+.+.. .+++++++.+++..
26136 T Consensus 66 ~l~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~~~~ 125 (368)
26137 T 4EYK_A 66 ELIV------------------NDKVNVIAGFGITPAALAAAPLATQAKVPEIVMAAGTSIITE--RSPYIVRTSFTLAQ 125 (368)
26138 T ss_dssp CCCC------------------CSCCSEEEECCSHHHHHHHHHHHHHHTCCEEESSCCCGGGGG--GCTTEEESSCCHHH
26139 T ss_pred HHHh------------------cCCcCEEEecCChHHHHHHHHHHHHcCCCEEEcCCCCccccC--CCCcEEEcCCChhh
26140 Confidence 4332 157889998876666566667778899999988765543322 24678888898888
26141
26142
26143 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
26144 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
26145 .++.+++++.+.+|+++++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .++|++++.
26146 T Consensus 126 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~i~~~ 201 (368)
26147 T 4EYK_A 126 SSIIIGDWAAKNGIKKVATLTSDYAPGNDALAFFKERFTAG-GGEIVEEIKVP--LANPDFAPFLQRMKD-AKPDAMFVF 201 (368)
26148 T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEEC--SSSCCCHHHHHHHHH-HCCSEEEEE
26149 T ss_pred hHHHHHHHHHHCCCCEEEEEecCChhhHHHHHHHHHHHHhC-CCeeceEEecC--CCCCCcHHHHHHHHH-hCCCEEEEE
26150 Confidence 88899999877899999999966667777888888888765 35543322222 122344556666653 578888877
26151
26152
26153 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
26154 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
26155 .....+..+++++++.|+.. ++.|++.+.+...... ........+.+...... . ....+....|.
26156 T Consensus 202 ~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~f~ 267 (368)
26157 T 4EYK_A 202 VPAGQGGNFMKQFAERGLDKSGIKVIGPGDVMDDDLL-NSMGDAALGVVTAHMYS----------A---AHPSAMNKEFV 267 (368)
26158 T ss_dssp CCTTCHHHHHHHHHHTTGGGTTCEEEEEGGGGCHHHH-TTCCGGGTTCEEEESCC----------T---TCCCHHHHHHH
26159 T ss_pred eccchHHHHHHHHHHcCCCcCCCEEEccccccCHHHH-HHchhhhCCcEEEeccc----------C---CCCCHHHHHHH
26160 Confidence 65466778888888888753 3566665533221110 00111122222211100 0 00001111222
26161
26162
26163 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
26164 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
26165 +.+++.++ ..+..++..+|||++++++++++.... .+++
26166 T Consensus 268 ~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~a~~~~~~~--------------~~~~ 306 (368)
26167 T 4EYK_A 268 AAYKKEFG---------------------------QRPGFMAVGGYDGIHLVFEALKKTGGK--------------ADGD 306 (368)
26168 T ss_dssp HHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHTTTC--------------CSHH
26169 T ss_pred HHHHHHHC---------------------------CCCChHHHHHHHHHHHHHHHHHHhCCC--------------CCHH
26170 Confidence 22222111 112345778999999999999886421 2345
26171
26172
26173 Q NP_000836.2 441 ELLGYIRAVNFNGSAGTPVTFNEN-GDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
26174 Q Consensus 441 ~l~~~l~~~~f~G~~G~~v~Fd~~-G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
26175 .+.++|++.+|.|.+| ++.|+++ |++...+.+.+++..++...++.+|.|...
26176 T Consensus 307 ~v~~~l~~~~~~g~~G-~~~f~~~~~~~~~~~~i~~~~~~~g~~~~~~vg~~~~~ 360 (368)
26177 T 4EYK_A 307 SLIAAMKGMKWESPRG-PISIDPETRDIVQNIYIRKVEKVDGELYNIEFAKFDAV 360 (368)
26178 T ss_dssp HHHHHHTTCEEEETTE-EEEECTTTCCEEEEEEEEEEEEETTEEEEEEEEEEEEE
26179 T ss_pred HHHHHHhCCCccCCCc-ceEeCCCCCcccceEEEEEEEeeCCeEEEeEEEEecCC
26180 Confidence 6778888778999888 8999975 566667888888732223457888888754
26181
26182
26183 No 71
26184 >3HUT_A putative branched-chain amino acid ABC; Extracellular ligand-binding receptor,Transport protein,Receptor or; 1.93A {Rhodospirillum rubrum ATCC 11170}
26185 Probab=99.54 E-value=4e-19 Score=189.00 Aligned_cols=350 Identities=17% Similarity=0.219 Sum_probs=215.6 Template_Neff=12.100
26186
26187 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
26188 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
26189 .++++||++.|.++.. ...+.....+++.|++++|+.+++ .|.++++...|+.+++.. ..+.+++
26190 T Consensus 2 ~~~~~Ig~i~~~~~~~----------~~~~~~~~~~~~~a~~~~n~~~~~-~g~~v~~~~~d~~~~~~~----~~~~~~~ 66 (358)
26191 T 3HUT_A 2 SLALLLGYELPLTGAN----------AAYGRVFQEAARLQLDRFNAAGGV-GGRPVDILYADSRDDADQ----ARTIARA 66 (358)
26192 T ss_dssp -CCEEEEEEECSSSTT----------HHHHHHHHHHHHHHHHHHHHTTTB-TTBCEEEEEEECTTCHHH----HHHHHHH
26193 T ss_pred CcceEEEEEecCCCCc----------HHHHHHHHHHHHHHHHHHHHcCCC-CCeeeEEEEecCCCCHHH----HHHHHHH
26194 Confidence 4678999999976532 124567889999999999987654 367788877776555332 2233333
26195
26196
26197 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
26198 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
26199 ++. ..+++++|++.++.....+...+...++|+|.++...+.+. ...++++++.++....
26200 T Consensus 67 ~~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~--~~~~~~~~~~~~~~~~ 126 (358)
26201 T 3HUT_A 67 FVD------------------DPRVVGVLGDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYI--KISPWQFRAITTPAFE 126 (358)
26202 T ss_dssp HHH------------------CTTEEEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGT--TSCTTEEESSCCGGGH
26203 T ss_pred Hhh------------------CCCEEEEEcCCCcHHHHHHHHHHHHhCCCEEccCCCCcchh--ccCCCeeEecCCccch
26204 Confidence 332 14788899887766555666777888999998876554332 1246788999998888
26205
26206
26207 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFA 282 (908)
26208 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~ 282 (908)
26209 ++.+++++.+.+|++|++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .+++++++..
26210 T Consensus 127 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ii~~~ 202 (358)
26211 T 3HUT_A 127 GPNNAAWMIGDGFTSVAVIGVTTDWGLSSAQAFRKAFELR-GGAVVVNEEVP--PGNRRFDDVIDEIED-EAPQAIYLAM 202 (358)
26212 T ss_dssp HHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEEC--TTCCCCHHHHHHHHH-HCCSEEEEES
26213 T ss_pred HHHHHHHHHhCCCCEEEEEEeCChhhHHHHHHHHHHHHHc-CCeEeeEEEeC--CCCCCHHHHHHHHHh-hCCCEEEEeC
26214 Confidence 8899999887899999999976667778888888888775 35543322222 122345556666653 4788887776
26215
26216
26217 Q NP_000836.2 283 NEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAEF 362 (908)
26218 Q Consensus 283 ~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (908)
26219 .+..+..+++++++.|+. ..+++.+.+...... ........+.+...... . ....+....|.+.
26220 T Consensus 203 ~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~f~~~ 266 (358)
26221 T 3HUT_A 203 AYEDAAPFLRALRARGSA--LPVYGSSALYSPKFI-DLGGPAVEGVRLATAFV----------L---GASDPVVVEFVSA 266 (358)
26222 T ss_dssp CHHHHHHHHHHHHHTTCC--CCEEECGGGCSHHHH-HHHGGGGTTCEEEESCC----------T---TCCSHHHHHHHHH
26223 T ss_pred CHHHHHHHHHHHHHCCCC--CCEEecchhcCHHHH-HhhcHHhCCeEEEEccc----------C---CCCCHHHHHHHHH
26224 Confidence 566677888888887773 345554433221110 00011122222111000 0 0000111122222
26225
26226
26227 Q NP_000836.2 363 WEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKEL 442 (908)
26228 Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~~l 442 (908)
26229 +++.++ ..++.++..+|||+++++.++++.... .++..+
26230 T Consensus 267 ~~~~~~---------------------------~~~~~~~~~~yda~~~~~~a~~~~~~~--------------~~~~~~ 305 (358)
26231 T 3HUT_A 267 YETLYG---------------------------AIPTLFAAHGYDAVGIMLAAVGRAGPE--------------VTRESL 305 (358)
26232 T ss_dssp HHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHHCTT--------------CCHHHH
26233 T ss_pred HHHHHC---------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCC--------------CCHHHH
26234 Confidence 221111 112345678999999999999876431 134567
26235
26236
26237 Q NP_000836.2 443 LGYIRAV-NFNGSAGTPVTFNENGDA-PGRYDIFQYQITNKSTEYKVIGHWTN 493 (908)
26238 Q Consensus 443 ~~~l~~~-~f~G~~G~~v~Fd~~G~~-~~~~~i~~~~~~~~~~~~~~Vg~~~~ 493 (908)
26239 .+.|++. .|.|.+| ++.|++++++ ...+.+++++ +++++.+|.|..
26240 T Consensus 306 ~~~l~~~~~~~g~~G-~~~f~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 353 (358)
26241 T 3HUT_A 306 RDALAATDRYAGVTG-ITRFDPETRETTKILTRLVVR----EGDFRVIDREGH 353 (358)
26242 T ss_dssp HHHHHTCCSEEETTE-EEEECTTTCCEEECCEEEEEE----TTEEEEC-----
26243 T ss_pred HHHHHcCCCccCCCe-eEEECCCCCccceeEEEEEEE----CCEEEEecCCCC
26244 Confidence 7778765 6899988 8999986543 4566777776 367888888864
26245
26246
26247 No 72
26248 >5KUH_C Glutamate receptor ionotropic, kainate 2; GluK2EM with LY466195, SIGNALING PROTEIN; HET: LY5; 11.6A {Rattus norvegicus}
26249 Probab=99.54 E-value=4.1e-19 Score=209.95 Aligned_cols=372 Identities=16% Similarity=0.193 Sum_probs=231.8 Template_Neff=11.700
26250
26251 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCS-RDTYALEQSLTFVQ 121 (908)
26252 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~-~~~~a~~~~~~~~~ 121 (908)
26253 +++++||+++|.++.. .+.....|+++|++++|++++++++..+.+...|+.+ +...+ .+.+.
26254 T Consensus 2 ~~~i~Ig~~~p~sg~~------------~g~~~~~~~~~A~~~in~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 65 (757)
26255 T 5KUH_C 2 THVLRFGGIFEYVESG------------PMGAEELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEA----SKKAC 65 (757)
26256 T ss_dssp CEEEEEEEEEEESSSC------------SCCHHHHHHHHHHHHHHHCSSSSSSEEEEEEEEEEETTCHHHH----HHHHH
26257 T ss_pred CceEEeEEEeecCCCC------------CCcHHHHHHHHHHHHHHcCcccCCCCeeeeeeEecCCCChHHH----HHHHH
26258 Confidence 4689999999998742 3567889999999999998877777888887777654 32211 11111
26259
26260
26261 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
26262 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
26263 +.. .++++++||+.++..+..++.+++..++|+|++.+.++.+.+ .+++++++.+++..
26264 T Consensus 66 ~~~-------------------~~~v~~viG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~~~~ 124 (757)
26265 T 5KUH_C 66 DQL-------------------SLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDN--KDSFYVSLYPDFSS 124 (757)
26266 T ss_dssp HHH-------------------HHCCSCEECCSSHHHHHHHHHHHHHTTCCEEECSCCCCCTTC--CCCSEEEEEECHHH
26267 T ss_pred HHH-------------------HcCccEEEcCCChHHHHHHHHHHHHHCCCEEEeecCCCCCCC--CCceEEEccCCHHH
26268 Confidence 111 147899999998888888888999999999998876665443 36889999999988
26269
26270
26271 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
26272 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
26273 .+.++++++.+++|+++++++ ++.++....+.+.+.+.+. ++++... .++ .+..++...+++++. .++++|++.
26274 T Consensus 125 ~~~~l~~~~~~~~~~~v~ii~-~~~~~~~~~~~~~~~~~~~-g~~v~~~-~~~--~~~~~~~~~l~~l~~-~~~~~vv~~ 198 (757)
26275 T 5KUH_C 125 LSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRY-NLRLKIR-QLP--ADTKDAKPLLKEMKR-GKEFHVIFD 198 (757)
26276 T ss_dssp HHHHHHHHHHHTTCSEEEEEE-SSTHHHHHTHHHHTGGGTS-SCEEEEE-ECC--SSGGGCHHHHHHHHH-TTCCEEEEE
26277 T ss_pred HHHHHHHHHHHcCCCEEEEEE-eCchHHHHHHHHHhCcccc-CceEEEE-EcC--CCccccHHHHHHHHh-CCCEEEEEE
26278 Confidence 899999999888999999999 5556766677777766664 3555432 232 223456667777763 578999888
26279
26280
26281 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
26282 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
26283 .....+..+++++++.|+.. .+.|+........... . .....+..... +.. .. ...+....+.
26284 T Consensus 199 ~~~~~~~~~l~~~~~~g~~~~~~~~i~~~~~~~~~~~-~--~~~~~~~~~~~--------~~~-~~----~~~~~~~~f~ 262 (757)
26285 T 5KUH_C 199 CSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDV-E--PYRYSGVNMTG--------FRI-LN----TENTQVSSII 262 (757)
26286 T ss_dssp SCHHHHHHHHHHHHHTTCCSTTCEEEECCTTGGGBCC-T--TTTTSCCEEEE--------EEC-SC----TTSHHHHHHH
26287 T ss_pred CCHHHHHHHHHHHHHcCCcCCCeEEEEeccCcccCCc-h--hhcccCcceEE--------EEE-ee----CCChHHHHHH
26288 Confidence 77777888999998888754 2345543211110000 0 00001100000 000 00 0011122233
26289
26290
26291 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRM-STIDG 439 (908)
26292 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~-~~~~~ 439 (908)
26293 +.|++.+..... .+... .....+..++..+|||++++++|++++....+.. ..|... ...++
26294 T Consensus 263 ~~~~~~~~~~~~----------~~~~~-----~~~~~~~~~~~~~ydav~~~~~al~~~~~~~~~~--~~~~~~~~~~~~ 325 (757)
26295 T 5KUH_C 263 EKWSMERLQAPP----------KPDSG-----LLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSS--LQCNRHKPWRFG 325 (757)
26296 T ss_dssp HHHHHHHTTSCC----------CSSSC-----BCTTCCCHHHHHHHHHHHHHHHHHHTCTTCCCCC--CCTTSCCCCTTH
26297 T ss_pred HHHHHhhcCCCC----------CCCCC-----CCCCCccHHHHHHHHHHHHHHHHHHhccccCCCc--cccCCCCcchhH
26298 Confidence 333322210000 00000 0001234567889999999999999876543211 112111 11244
26299
26300
26301 Q NP_000836.2 440 KELLGYIRAVNFNGSAGTPVTFNENGDAPGR--YDIFQYQITNKSTEYKVIGHWTNQL 495 (908)
26302 Q Consensus 440 ~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~--~~i~~~~~~~~~~~~~~Vg~~~~~~ 495 (908)
26303 ..+.+.|++..|.|.+| ++.||++|++... +.++++. ++.++.||.|....
26304 T Consensus 326 ~~l~~~l~~~~~~g~~G-~i~f~~~~~~~~~~~~~~~~~~----~~~~~~vg~~~~~~ 378 (757)
26305 T 5KUH_C 326 TRFMSLIKEAHWEGLTG-RITFNKTNGLRTDFDLDVISLK----EEGLEKIGTWDPAS 378 (757)
26306 T ss_dssp HHHHHHHHTCEEEETTE-EEECCTTTSEECCCCEEEEEEE----TTEEEEEEEEETTT
26307 T ss_pred HHHHHHHHhcccCCccc-eeEecccCCeeeeeEEEEEEcc----cccceeeEEEECCC
26308 Confidence 56778888889999988 8999987777654 4444444 35789999998653
26309
26310
26311 No 73
26312 >4EVQ_A Putative ABC transporter subunit, substrate-binding; Structural Genomics, PSI-Biology, Midwest Center; HET: PHB, MSE, SO4, GOL; 1.4A {Rhodopseudomonas palustris}
26313 Probab=99.54 E-value=4.1e-19 Score=190.38 Aligned_cols=352 Identities=16% Similarity=0.137 Sum_probs=219.3 Template_Neff=11.900
26314
26315 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
26316 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
26317 .....++++||+++|..+... ..+.....+++.+++++|. ...|+++++...|+.+++.. ..+
26318 T Consensus 10 ~~~~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~~~---~~~g~~v~~~~~d~~~~~~~----~~~ 72 (375)
26319 T 4EVQ_A 10 SYAQAGALKVGLLLPYSGTYA----------PLGEAITRGLELYVQSQGG---KLGGRSISFVKVDDESAPPK----ATE 72 (375)
26320 T ss_dssp -----CCEEEEEEECSSSTTH----------HHHHHHHHHHHHHHHHTTT---EETTEEEEEEEEECTTCHHH----HHH
26321 T ss_pred cccCCCcEEEEEEeCCCCCch----------hhhHHHHHHHHHHHHhcCC---CcCCEEEEEEEecCCCChHH----HHH
26322 Confidence 446678999999999876421 2456788899999998753 22367788777776554322 233
26323
26324
26325 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
26326 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
26327 .+++++. .++++++|++.++.....+...+...++|+|.+....+.+......++++++.++
26328 T Consensus 73 ~~~~l~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~ 134 (375)
26329 T 4EVQ_A 73 LTTKLIQ------------------SEKADVLIGTVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFA 134 (375)
26330 T ss_dssp HHHCCCC------------------CSCCSEEEECSSHHHHHHHHHHHHHHCCCEEESSCCCGGGGTTTCCTTEEESSCC
26331 T ss_pred HHHHHHH------------------cCCCCEEEEecCHHHHHHHHHHHHHhCCCEEEcCCCChhhcccccCCCEEEeecC
26332 Confidence 3333332 1578999987766655666677788899999887665443322235678888898
26333
26334
26335 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
26336 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
26337 +...++.+++++.+.+|+++++++.++.++..+.+.+++.+++. ++++.....+. ....+....+++++. .++|++
26338 T Consensus 135 ~~~~~~~~~~~l~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~i 210 (375)
26339 T 4EVQ_A 135 NGQIGRATGDAMIKAGLKKAVTVTWKYAAGEEMVSGFKKSFTAG-KGEVVKDITIA--FPDVEFQSALAEIAS-LKPDCV 210 (375)
26340 T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEEC--TTCCCCHHHHHHHHH-HCCSEE
26341 T ss_pred hhHHHHHHHHHHHHcCCCeEEEEeeCChHhHHHHHHHHHHHHhC-CCeEeeEEEec--CCCcchHHHHHHHHh-hCCCEE
26342 Confidence 88888899999887899999999866667777888888888765 35443322222 122345566677763 478888
26343
26344
26345 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVW 358 (908)
26346 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (908)
26347 ++...+..+..+++++++.|+. ..+++.+.|..... ........+.+..... .. ....+....
26348 T Consensus 211 i~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----------~~---~~~~~~~~~ 273 (375)
26349 T 4EVQ_A 211 YAFFSGGGALKFIKDYAAANLG--IPLWGPGFLTDGVE--AAAGPAGDGIKTVLHY----------VS---DLDNAENQA 273 (375)
26350 T ss_dssp EEECCTHHHHHHHHHHHHTTCC--CCEEEEGGGTTTTH--HHHGGGGTTCEEEESC----------CT---TCCSHHHHH
26351 T ss_pred EEEeecchHHHHHHHHHHCCCC--CCEEeccccchhHH--HHHccccCCcEEEEec----------CC---CCCCHHHHH
26352 Confidence 8776566677888988888874 34554432221100 0001112222211110 00 000011112
26353
26354
26355 Q NP_000836.2 359 FAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTID 438 (908)
26356 Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~ 438 (908)
26357 |.+.+++.++ ..++.++..+||++++++.|++++... ..+
26358 T Consensus 274 f~~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~~-------------~~~ 313 (375)
26359 T 4EVQ_A 274 FVKSFEAAYK---------------------------IPPDVFAVQGWDAGQLLDAGVKAVGGD-------------VAK 313 (375)
26360 T ss_dssp HHHHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHTTTC-------------TTC
26361 T ss_pred HHHHHHHHHC---------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCC-------------ccc
26362 Confidence 2222222111 112356778999999999999987531 123
26363
26364
26365 Q NP_000836.2 439 GKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHW 491 (908)
26366 Q Consensus 439 ~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~ 491 (908)
26367 ++.+.+.|++..|.|.+| ++.||++|++...+.+.+++ ++.++.+|.+
26368 T Consensus 314 ~~~l~~~l~~~~~~g~~G-~i~f~~~g~~~~~~~i~~~~----~~~~~~~~~~ 361 (375)
26369 T 4EVQ_A 314 RKELNAAMAAASFASPRG-PFKLSAAHNPVQNFYLRELK----GGKSVNLGLA 361 (375)
26370 T ss_dssp HHHHHHHHHTCEEEETTE-EEEBCTTSCBCCCEEEEEEE----TTEEEEEEEE
26371 T ss_pred HHHHHHHHHcCCCCCCCc-ceEeCCCCCeeeeEEEEEEE----CCeEEEeEEe
26372 Confidence 456778888888999999 89999888877778888887 3567777766
26373
26374
26375 No 74
26376 >4EVQ_B Putative ABC transporter subunit, substrate-binding; Structural Genomics, PSI-Biology, Midwest Center; HET: GOL, PHB, SO4; 1.4A {Rhodopseudomonas palustris}
26377 Probab=99.54 E-value=4.1e-19 Score=190.38 Aligned_cols=352 Identities=16% Similarity=0.137 Sum_probs=222.2 Template_Neff=11.900
26378
26379 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
26380 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
26381 .....++++||+++|..+... ..+.....+++.+++++|. ...|+++++...|+.+++.. ..+
26382 T Consensus 10 ~~~~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~~~---~~~g~~v~~~~~d~~~~~~~----~~~ 72 (375)
26383 T 4EVQ_B 10 SYAQAGALKVGLLLPYSGTYA----------PLGEAITRGLELYVQSQGG---KLGGRSISFVKVDDESAPPK----ATE 72 (375)
26384 T ss_dssp CHHHHCCEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHTTT---EETTEEEEEEEEECTTCHHH----HHH
26385 T ss_pred cccCCCcEEEEEEeCCCCCch----------hhhHHHHHHHHHHHHhcCC---CcCCEEEEEEEecCCCChHH----HHH
26386 Confidence 446678999999999876421 2456788899999998753 22367788777776554322 233
26387
26388
26389 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
26390 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
26391 .+++++. .++++++|++.++.....+...+...++|+|.+....+.+......++++++.++
26392 T Consensus 73 ~~~~l~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~ 134 (375)
26393 T 4EVQ_B 73 LTTKLIQ------------------SEKADVLIGTVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFA 134 (375)
26394 T ss_dssp HHHCCCC------------------CSCCSEEEECSSHHHHHHHHHHHHHHCCCEEESSCCCGGGGTTTCCTTEEESSCC
26395 T ss_pred HHHHHHH------------------cCCCCEEEEecCHHHHHHHHHHHHHhCCCEEEcCCCChhhcccccCCCEEEeecC
26396 Confidence 3333332 1578999987766655666677788899999887665443322235678888898
26397
26398
26399 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
26400 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
26401 +...++.+++++.+.+|+++++++.++.++..+.+.+++.+++. ++++.....+. ....+....+++++. .++|++
26402 T Consensus 135 ~~~~~~~~~~~l~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~i 210 (375)
26403 T 4EVQ_B 135 NGQIGRATGDAMIKAGLKKAVTVTWKYAAGEEMVSGFKKSFTAG-KGEVVKDITIA--FPDVEFQSALAEIAS-LKPDCV 210 (375)
26404 T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEEC--TTCCCCHHHHHHHHH-HCCSEE
26405 T ss_pred hhHHHHHHHHHHHHcCCCeEEEEeeCChHhHHHHHHHHHHHHhC-CCeEeeEEEec--CCCcchHHHHHHHHh-hCCCEE
26406 Confidence 88888899999887899999999866667777888888888765 35443322222 122345566677763 478888
26407
26408
26409 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVW 358 (908)
26410 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (908)
26411 ++...+..+..+++++++.|+. ..+++.+.|..... ........+.+..... .. ....+....
26412 T Consensus 211 i~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----------~~---~~~~~~~~~ 273 (375)
26413 T 4EVQ_B 211 YAFFSGGGALKFIKDYAAANLG--IPLWGPGFLTDGVE--AAAGPAGDGIKTVLHY----------VS---DLDNAENQA 273 (375)
26414 T ss_dssp EEECCTHHHHHHHHHHHHTTCC--CCEEEEGGGTTTTH--HHHGGGGTTCEEEESC----------CT---TCCSHHHHH
26415 T ss_pred EEEeecchHHHHHHHHHHCCCC--CCEEeccccchhHH--HHHccccCCcEEEEec----------CC---CCCCHHHHH
26416 Confidence 8776566677888988888874 34554432221100 0001112222211110 00 000011112
26417
26418
26419 Q NP_000836.2 359 FAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTID 438 (908)
26420 Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~ 438 (908)
26421 |.+.+++.++ ..++.++..+||++++++.|++++... ..+
26422 T Consensus 274 f~~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~~-------------~~~ 313 (375)
26423 T 4EVQ_B 274 FVKSFEAAYK---------------------------IPPDVFAVQGWDAGQLLDAGVKAVGGD-------------VAK 313 (375)
26424 T ss_dssp HHHHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHTTTC-------------TTC
26425 T ss_pred HHHHHHHHHC---------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCC-------------ccc
26426 Confidence 2222222111 112356778999999999999987531 123
26427
26428
26429 Q NP_000836.2 439 GKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHW 491 (908)
26430 Q Consensus 439 ~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~ 491 (908)
26431 ++.+.+.|++..|.|.+| ++.||++|++...+.+.+++ ++.++.+|.+
26432 T Consensus 314 ~~~l~~~l~~~~~~g~~G-~i~f~~~g~~~~~~~i~~~~----~~~~~~~~~~ 361 (375)
26433 T 4EVQ_B 314 RKELNAAMAAASFASPRG-PFKLSAAHNPVQNFYLRELK----GGKSVNLGLA 361 (375)
26434 T ss_dssp HHHHHHHHHTCEEEETTE-EEEBCTTSCBCCCEEEEEEE----TTEEEEEEEE
26435 T ss_pred HHHHHHHHHcCCCCCCCc-ceEeCCCCCeeeeEEEEEEE----CCeEEEeEEe
26436 Confidence 456778888888999999 89999888877778888887 3567777766
26437
26438
26439 No 75
26440 >4N0Q_B Leu/Ile/Val-binding protein homolog 3; structural genomics, NIAID, National Institute; HET: LEU; 2.3A {Brucella melitensis}
26441 Probab=99.54 E-value=4.2e-19 Score=188.61 Aligned_cols=336 Identities=17% Similarity=0.229 Sum_probs=214.3 Template_Neff=11.900
26442
26443 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
26444 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
26445 ..+++||++.|+++... ..+.....+++.|++++|+.+++. |.++++.+.|+.+++.. ..+.+++
26446 T Consensus 8 ~~~~~ig~~~p~sg~~~----------~~~~~~~~g~~~a~~~~n~~~~~~-g~~i~~~~~d~~~~~~~----~~~~~~~ 72 (354)
26447 T 4N0Q_B 8 HADITIGVIAPLTGPVA----------AFGDQVKKGAETAVEVINKAGGIK-GEKVVLKFADDAGEPKQ----GVSAANQ 72 (354)
26448 T ss_dssp -CCEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHHHHTTTBT-TBCEEEEEEECTTCHHH----HHHHHHH
26449 T ss_pred ccCeEEEEEEcCCCCcH----------HHHHHHHHHHHHHHHHHHHccCCC-CeeEEEEEecCCCCHHH----HHHHHHH
26450 Confidence 35789999999987642 366788999999999999876543 67888888887665432 2233333
26451
26452
26453 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
26454 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
26455 ++. ++++++|++.++.....+...+...++|+|.+....+.+... .+++++++.+++...
26456 T Consensus 73 l~~-------------------~~v~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 132 (354)
26457 T 4N0Q_B 73 IVG-------------------DGIKFVVGLVTTGVAVPVSDVLSENGVLMVTPTATGPDLTAR-GLENVFRTCGRDGQQ 132 (354)
26458 T ss_dssp HHH-------------------TTCCEEEECCSHHHHHHHHHHHHHTTCEEEESSCCCGGGGSS-CCSSEEESSCCHHHH
26459 T ss_pred HHh-------------------CCCCEEEEcCCcccHHHHHHHHHHcCCEEEecccCCcchhhc-CCCceeecCCChHHH
26460 Confidence 332 478899987766655566677788899999987655443321 256788999998888
26461
26462
26463 Q NP_000836.2 203 AQAMVDIV-TALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
26464 Q Consensus 203 ~~~~~~~l-~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
26465 ++.+++++ ++++|+++++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .++|++++.
26466 T Consensus 133 ~~~~~~~l~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~vi~~ 208 (354)
26467 T 4N0Q_B 133 AEVMADYVLKNMKDKKVAVIHDKGAYGKGLADAFKAAINKG-GITEVHYDSVT--PGDKDFSALVTKLKS-AGAEVVYFG 208 (354)
26468 T ss_dssp HHHHHHHHHHHCTTSCEEEEECSSHHHHHHHHHHHHHHHHT-TCCCSEEEECC--TTCCCCHHHHHHHHH-TTCSEEEEE
26469 T ss_pred HHHHHHHHHHhcCCCEEEEEECCCHhhHHHHHHHHHHHHhC-CCeeeEEEeeC--CCCCChHHHHHHHHH-CCCCEEEEe
26470 Confidence 99999988 45689999999976667777888888888775 45544322222 122344555666653 578888777
26471
26472
26473 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAE 361 (908)
26474 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (908)
26475 ..+..+..+++++++.|+. +.|++.+.|...... ........+....... . . ...+.+.+
26476 T Consensus 209 ~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~---~---~~~~~~~~ 268 (354)
26477 T 4N0Q_B 209 GYHAEGGLLSRQLHDAGMQ--ALVLGGEGLSNTEYW-AIGGTNAQGTLFTNAK-----------D---A---TKNPAAKD 268 (354)
26478 T ss_dssp SCHHHHHHHHHHHHHTTCC--CEEEECGGGCSHHHH-HHHGGGGTTCEEEEEC-----------C---G---GGSGGGHH
26479 T ss_pred cCchhHHHHHHHHHHcCCC--cEEEeccccCCHHHH-HhhcccccCcEEecCC-----------c---c---CCCHHHHH
26480 Confidence 6566677888888888773 466665544322110 0001111222111100 0 0 01111222
26481
26482
26483 Q NP_000836.2 362 FWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKE 441 (908)
26484 Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (908)
26485 +.++ +.. .. ..++.++..+|||++++++|++++... .+++.
26486 T Consensus 269 f~~~-~~~-~~-----------------------~~~~~~~~~~yda~~~~~~a~~~~~~~--------------~~~~~ 309 (354)
26487 T 4N0Q_B 269 AIQA-LKA-KN-----------------------IPAEAFTMNAYAAVEVIKAGIERAGST--------------DDSAA 309 (354)
26488 T ss_dssp HHHH-HHH-TT-----------------------CCCCHHHHHHHHHHHHHHHHHHHHTCS--------------SCHHH
26489 T ss_pred HHHH-HHH-cC-----------------------CCCChHHHHHHHHHHHHHHHHHHhCCC--------------CCHHH
26490 Confidence 2221 110 00 112356778999999999999886431 13445
26491
26492
26493 Q NP_000836.2 442 LLGYIRA-VNFNGSAGTPVTFNENGDAP-GRYDIFQYQ 477 (908)
26494 Q Consensus 442 l~~~l~~-~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~ 477 (908)
26495 +.++|++ ..|.|.+| .+.|+++|++. ..+.+++++
26496 T Consensus 310 ~~~~l~~~~~~~g~~g-~i~f~~~g~~~~~~~~i~~~~ 346 (354)
26497 T 4N0Q_B 310 VAKALHDGKPIETAIG-TLTYSETGDLSSPSFDIFKWD 346 (354)
26498 T ss_dssp HHHHHTSSCCEEETTE-EECBCTTSCBSSCCEEEEEEE
26499 T ss_pred HHHHHhcCCCCcccee-EEEeCCCCCCCCCeeEEEEEE
26500 Confidence 7777865 57899988 89999888875 356777776
26501
26502
26503 No 76
26504 >4N0Q_C Leu/Ile/Val-binding protein homolog 3; structural genomics, NIAID, National Institute; HET: LEU; 2.3A {Brucella melitensis}
26505 Probab=99.54 E-value=4.2e-19 Score=188.61 Aligned_cols=336 Identities=17% Similarity=0.229 Sum_probs=213.8 Template_Neff=11.900
26506
26507 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
26508 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
26509 ..+++||++.|+++... ..+.....+++.|++++|+.+++. |.++++.+.|+.+++.. ..+.+++
26510 T Consensus 8 ~~~~~ig~~~p~sg~~~----------~~~~~~~~g~~~a~~~~n~~~~~~-g~~i~~~~~d~~~~~~~----~~~~~~~ 72 (354)
26511 T 4N0Q_C 8 HADITIGVIAPLTGPVA----------AFGDQVKKGAETAVEVINKAGGIK-GEKVVLKFADDAGEPKQ----GVSAANQ 72 (354)
26512 T ss_dssp --CEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHHHHTTCSS-SCCEEEEEEECTTCHHH----HHHHHHH
26513 T ss_pred ccCeEEEEEEcCCCCcH----------HHHHHHHHHHHHHHHHHHHccCCC-CeeEEEEEecCCCCHHH----HHHHHHH
26514 Confidence 35789999999987642 366788999999999999876543 67888888887665432 2233333
26515
26516
26517 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
26518 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
26519 ++. ++++++|++.++.....+...+...++|+|.+....+.+... .+++++++.+++...
26520 T Consensus 73 l~~-------------------~~v~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 132 (354)
26521 T 4N0Q_C 73 IVG-------------------DGIKFVVGLVTTGVAVPVSDVLSENGVLMVTPTATGPDLTAR-GLENVFRTCGRDGQQ 132 (354)
26522 T ss_dssp HHH-------------------TTCCEEEECCSHHHHHHHHHHHHHTTCEEEESSCCCGGGSSS-CCSSEEESSCCHHHH
26523 T ss_pred HHh-------------------CCCCEEEEcCCcccHHHHHHHHHHcCCEEEecccCCcchhhc-CCCceeecCCChHHH
26524 Confidence 332 478899987766655566677788899999987655443321 256788999998888
26525
26526
26527 Q NP_000836.2 203 AQAMVDIV-TALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
26528 Q Consensus 203 ~~~~~~~l-~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
26529 ++.+++++ ++++|+++++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .++|++++.
26530 T Consensus 133 ~~~~~~~l~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~vi~~ 208 (354)
26531 T 4N0Q_C 133 AEVMADYVLKNMKDKKVAVIHDKGAYGKGLADAFKAAINKG-GITEVHYDSVT--PGDKDFSALVTKLKS-AGAEVVYFG 208 (354)
26532 T ss_dssp HHHHHHHHHHHCTTSCEEEEECSSHHHHHHHHHHHHHHHHH-TCCCSEEEECC--TTCCCCHHHHHHHHH-TTCSEEEEE
26533 T ss_pred HHHHHHHHHHhcCCCEEEEEECCCHhhHHHHHHHHHHHHhC-CCeeeEEEeeC--CCCCChHHHHHHHHH-CCCCEEEEe
26534 Confidence 99999988 45689999999976667777888888888775 45544322222 122344555666653 578888777
26535
26536
26537 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAE 361 (908)
26538 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (908)
26539 ..+..+..+++++++.|+. +.|++.+.|...... ........+....... . . ...+.+.+
26540 T Consensus 209 ~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~---~---~~~~~~~~ 268 (354)
26541 T 4N0Q_C 209 GYHAEGGLLSRQLHDAGMQ--ALVLGGEGLSNTEYW-AIGGTNAQGTLFTNAK-----------D---A---TKNPAAKD 268 (354)
26542 T ss_dssp SCHHHHHHHHHHHHHTTCC--CEEEECGGGCSHHHH-HHHGGGGTTCEEEEEC-----------C---S---TTSGGGHH
26543 T ss_pred cCchhHHHHHHHHHHcCCC--cEEEeccccCCHHHH-HhhcccccCcEEecCC-----------c---c---CCCHHHHH
26544 Confidence 6566677888888888773 466665544322110 0001111222111100 0 0 01111222
26545
26546
26547 Q NP_000836.2 362 FWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKE 441 (908)
26548 Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (908)
26549 +.++ +.. .. ..++.++..+|||++++++|++++... .+++.
26550 T Consensus 269 f~~~-~~~-~~-----------------------~~~~~~~~~~yda~~~~~~a~~~~~~~--------------~~~~~ 309 (354)
26551 T 4N0Q_C 269 AIQA-LKA-KN-----------------------IPAEAFTMNAYAAVEVIKAGIERAGST--------------DDSAA 309 (354)
26552 T ss_dssp HHHH-HHH-TT-----------------------CCCCHHHHHHHHHHHHHHHHHHHHTCS--------------SCHHH
26553 T ss_pred HHHH-HHH-cC-----------------------CCCChHHHHHHHHHHHHHHHHHHhCCC--------------CCHHH
26554 Confidence 2221 110 00 112356778999999999999886431 13445
26555
26556
26557 Q NP_000836.2 442 LLGYIRA-VNFNGSAGTPVTFNENGDAP-GRYDIFQYQ 477 (908)
26558 Q Consensus 442 l~~~l~~-~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~ 477 (908)
26559 +.++|++ ..|.|.+| .+.|+++|++. ..+.+++++
26560 T Consensus 310 ~~~~l~~~~~~~g~~g-~i~f~~~g~~~~~~~~i~~~~ 346 (354)
26561 T 4N0Q_C 310 VAKALHDGKPIETAIG-TLTYSETGDLSSPSFDIFKWD 346 (354)
26562 T ss_dssp HHHHHHSCCCEEETTE-EECBCTTSCBSSCCEEEEEEE
26563 T ss_pred HHHHHhcCCCCcccee-EEEeCCCCCCCCCeeEEEEEE
26564 Confidence 7777865 57899988 89999888875 356777776
26565
26566
26567 No 77
26568 >3SAJ_C Glutamate receptor 1; Rossmann fold, ion channel, membrane; HET: BMA, MAN, NAG; 2.5A {Rattus norvegicus}
26569 Probab=99.54 E-value=4.5e-19 Score=190.74 Aligned_cols=357 Identities=17% Similarity=0.268 Sum_probs=218.4 Template_Neff=11.900
26570
26571 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
26572 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
26573 ...++++||+++|.++ .....|+++|++++|+++++++++++ +...|+.. ..+.+
26574 T Consensus 6 ~~~~~i~Ig~~~~~~~----------------~~~~~~~~~a~~~~n~~~~~~~~~~~-~~~~d~~~--------~~~~~ 60 (384)
26575 T 3SAJ_C 6 AMPNNIQIGGLFPNQQ----------------SQEHAAFRFALSQLTEPPKLLPQIDI-VNISDSFE--------MTYRF 60 (384)
26576 T ss_pred cCCCCEEEEEEcCCCc----------------HHHHHHHHHHHHHHHHcCCCCCCEEE-EEEcCcHH--------HHHHH
26577 Confidence 4567899999999875 24668999999999987766555555 44444321 11122
26578
26579
26580 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
26581 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
26582 .+++. ++++++||+.++..+..++..+...++|+|++.+.... ..++++. .+++
26583 T Consensus 61 ~~~~~-------------------~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~-----~~~~~~~-~~~~- 114 (384)
26584 T 3SAJ_C 61 CSQFS-------------------KGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVDT-----SNQFVLQ-LRPE- 114 (384)
26585 T ss_pred HHHHh-------------------cCCCEEECCCCHHHHHHHHHHHHHhCCCEEeCCCCCCC-----CCCccee-cCHH-
26586 Confidence 22221 47889999888877777788889999999998754321 1233333 4333
26587
26588
26589 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
26590 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
26591 .+.++++++++++|++|++++ ++.++....+.+++.+++. ++++.....++ .+..++...+++++. .++|+|++
26592 T Consensus 115 -~~~~~~~~~~~~~~~~v~ii~-~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ii~ 188 (384)
26593 T 3SAJ_C 115 -LQEALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAEK-NWQVTAVNILT--TTEEGYRMLFQDLEK-KKERLVVV 188 (384)
26594 T ss_pred -HHHHHHHHHHHhCCCEEEEEe-cChhhHHHHHHHHHHHHHc-CCeEEEEEecC--CCCCCcHHHHHHHHH-hCCCEEEE
26595 Confidence 678888888888999999999 6677877788888887775 35554433332 122456666777763 57899988
26596
26597
26598 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSD-SWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVW 358 (908)
26599 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (908)
26600 .........+++++++.|+.. .+.|+..+ .|..... ........+...... + . ...+....
26601 T Consensus 189 ~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~----------~-~----~~~~~~~~ 251 (384)
26602 T 3SAJ_C 189 DCESERLNAILGQIVKLEKNGIGYHYILANLGFMDIDL--NKFKESGANVTGFQL----------V-N----YTDTIPAR 251 (384)
26603 T ss_pred eCCHHHHHHHHHHHHHCCCCCCCeEEEEeCCCcCCCch--HHhhhcccccceeEe----------e-C----CCCcccHH
26604 Confidence 877777788999998888753 46677654 2322110 000000111111000 0 0 00111122
26605
26606
26607 Q NP_000836.2 359 FAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG----YIGLCPRM 434 (908)
26608 Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~----~~~~~~~~ 434 (908)
26609 +.+.|++.+.. .|.... ...+..++..+|||++++++++++.....+.. ....|...
26610 T Consensus 252 f~~~~~~~~~~-------------~~~~~~------~~~~~~~~~~~ydav~~~~~al~~~~~~~~~~~~~~~~~~c~~~ 312 (384)
26611 T 3SAJ_C 252 IMQQWRTSDSR-------------DHTRVD------WKRPKYTSALTYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLAN 312 (384)
26612 T ss_pred HHHHHHHHHCC-------------CCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccCCC
26613 Confidence 33333333221 010000 01234567889999999999999987543210 01122211
26614
26615
26616 Q NP_000836.2 435 ---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQL 495 (908)
26617 Q Consensus 435 ---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~~ 495 (908)
26618 ...++..+.+.|++..|.|.+| ++.||++|++.. .+.+++++ ++.++.||.|+...
26619 T Consensus 313 ~~~~~~~~~~l~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~i~~~~----~~~~~~vg~w~~~~ 372 (384)
26620 T 3SAJ_C 313 PAVPWGQGIDIQRALQQVRFEGLTG-NVQFNEKGRRTNYTLHVIEMK----HDGIRKIGYWNEDD 372 (384)
26621 T ss_pred CCCCccCHHHHHHHHhcCCcccCCc-cEEEcCCCCCCCeeEEEEEee----CCcEEEeEEEeCCC
26622 Confidence 0114456778888889999998 899999998753 56666665 35789999998653
26623
26624
26625 No 78
26626 >6E7R_B Glutamate receptor ionotropic, NMDA 1; NMDA Receptor, Ion channel, Allosteric; HET: HYS, CL, MAN, NAG, BMA; 2.1A {Xenopus laevis}
26627 Probab=99.53 E-value=6e-19 Score=188.06 Aligned_cols=348 Identities=15% Similarity=0.202 Sum_probs=223.3 Template_Neff=12.000
26628
26629 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
26630 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
26631 ++++||+++|.. ....|++.|++++|+.++++ |.++++... +.+++.. ..+.+.++
26632 T Consensus 2 ~~i~ig~~~~~~------------------~~~~~~~~a~~~in~~~~~~-g~~i~l~~~-~~~~~~~----~~~~~~~l 57 (363)
26633 T 6E7R_B 2 PSIGIAVILVGT------------------SDEVAIKDAHEKDDFHHLSV-VPRVELVAM-NETDPKS----IITRICDL 57 (363)
26634 T ss_dssp CEEEEEEEEESS------------------CCHHHHHHHTTGGGGCCSSS-EEEEEEEEE-CCCSHHH----HHHHHHHH
26635 T ss_pred CceeEEEEEeCC------------------chhHHHHHHHHhcCCCCCcc-CCcEEEEEc-CCCCHHH----HHHHHHHH
26636 Confidence 578999998621 35678999999999877654 567777666 4444332 22333333
26637
26638
26639 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVI--GAAASSV-SIMVANILRLFKIPQISYASTA-PELSDNTRYDFFSRVVPPD 199 (908)
26640 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vI--g~~~s~~-~~~va~~~~~~~iP~Is~~~~~-~~l~~~~~~~~~~~~~~~~ 199 (908)
26641 +. .++++++| |+.++.. +..+...+...++|+|++.+.. ..+++...+++++++.+++
26642 T Consensus 58 ~~------------------~~~v~~vi~~g~~~s~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (363)
26643 T 6E7R_B 58 MS------------------DRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQFGPSI 119 (363)
26644 T ss_dssp HH------------------HSCEEEEEEEESSCCTHHHHHHHHHHHHHTCCEEEEEGGGGSCCCSCCTTCCEEESSCCH
26645 T ss_pred Hh------------------hCCceEEEEcCCCCHHHHHHHHHHHHHhhCCCEEEecCCCcccccCCCccceeEEcCCCH
26646 Confidence 32 14789999 8877753 6677778888999999887643 2333333578999999999
26647
26648
26649 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPR-PGEFEKIIKRLLETPNARAV 278 (908)
26650 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~vi 278 (908)
26651 ...++++++++.+++|+++++++.+++++....+.+++.+++. ++++.....++.... ..++...+++++. .++++|
26652 T Consensus 120 ~~~~~~~~~~~~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~v 197 (363)
26653 T 6E7R_B 120 EQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENS-FVGWELEEVLLLDMSLDDGDSKIQNQLKK-LQSPII 197 (363)
26654 T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECSSTTHHHHHHHHHHHHHTS-SSCCEEEEEEECCTTSCCTTCHHHHHHTT-CCCSEE
26655 T ss_pred HHHHHHHHHHHHHcCCeEEEEEEEcCCChHHHHHHHHHHHhhc-CCCeEEEEEEEecCCCCCchHHHHHHHHh-CCCCEE
26656 Confidence 9899999999988899999999987778887888888877765 355543222211011 2245566777763 578988
26657
26658
26659 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNV 357 (908)
26660 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (908)
26661 ++......+..+++++++.|+.. ++.|+..+.+...... . ......+.+.+
26662 T Consensus 198 v~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~-~~~~~~g~~~~-------------------------- 249 (363)
26663 T 6E7R_B 198 LLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDT-V-PSEFPTGLISV-------------------------- 249 (363)
26664 T ss_dssp EEESCHHHHHHHHHHHHHTTCSSTTCEEEECHHHHCSTTC-C-CTTSCTTCEEE--------------------------
26665 T ss_pred EEeCCHHHHHHHHHHHHHcCCCCCCeEEEeecCCCCCCCC-C-CccCCCceEEE--------------------------
26666 Confidence 88877777788899888888753 4567665422211000 0 00000110000
26667
26668
26669 Q NP_000836.2 358 WFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG--YIGLCPRM- 434 (908)
26670 Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~--~~~~~~~~- 434 (908)
26671 .+ . .+ ...++..+|||++++++|++++....+.. ....|...
26672 T Consensus 250 ~~----~-~~------------------------------~~~~~~~~ydav~~~~~al~~~~~~~~~~~~~~~~c~~~~ 294 (363)
26673 T 6E7R_B 250 SY----D-EW------------------------------DYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSCYNTH 294 (363)
26674 T ss_dssp EC----S-SS------------------------------SSCHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCSCSTTTT
26675 T ss_pred ee----c-cc------------------------------ccChhHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCC
26676 Confidence 00 0 00 01235678999999999999987532110 01122211
26677
26678
26679 Q NP_000836.2 435 --STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWA 505 (908)
26680 Q Consensus 435 --~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~ 505 (908)
26681 ...++..+.++|++..|.| | ++.|+++|++. ..+.|++++. ...++.||.|+... ++...+.|+
26682 T Consensus 295 ~~~~~~~~~l~~~l~~~~~~g--g-~i~f~~~g~~~~~~~~i~~~~~---~~~~~~vg~w~~~~-l~~~~~~w~ 361 (363)
26683 T 6E7R_B 295 EKRIYQSNMLNRYLINVTFEG--R-DLSFSEDGYQMHPKLVIILLNK---ERKWERVGKWKDKS-LQMKYYVWP 361 (363)
26684 T ss_dssp GGGGGCCCTTHHHHTSCEETT--E-ECCBCTTSBBSSCCEEEEEECT---TSCEEEEEEEETTE-EEESCSSCC
26685 T ss_pred cccchhhHHHHHHHcceEecC--e-eeeeCCCCccccceEEEEEeeC---CCceEEEEEEECCe-eEeeceecC
26686 Confidence 1124556778888888987 7 89999999875 5788888873 25688999998762 333346663
26687
26688
26689 No 79
26690 >6E7S_D Glutamate receptor ionotropic, NMDA 1; NMDA Receptor, Ion channel, Allosteric; HET: MAN, HZ4, NAG, BMA; 2.72A {Xenopus laevis}
26691 Probab=99.53 E-value=6e-19 Score=188.06 Aligned_cols=348 Identities=15% Similarity=0.202 Sum_probs=223.3 Template_Neff=12.000
26692
26693 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
26694 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
26695 ++++||+++|.. ....|++.|++++|+.++++ |.++++... +.+++.. ..+.+.++
26696 T Consensus 2 ~~i~ig~~~~~~------------------~~~~~~~~a~~~in~~~~~~-g~~i~l~~~-~~~~~~~----~~~~~~~l 57 (363)
26697 T 6E7S_D 2 PSIGIAVILVGT------------------SDEVAIKDAHEKDDFHHLSV-VPRVELVAM-NETDPKS----IITRICDL 57 (363)
26698 T ss_dssp CEEEEEEEEESS------------------CCHHHHHHHHTTTTTCCSSC-EEEEEEEEE-SCCSHHH----HHHHHHHH
26699 T ss_pred CceeEEEEEeCC------------------chhHHHHHHHHhcCCCCCcc-CCcEEEEEc-CCCCHHH----HHHHHHHH
26700 Confidence 578999998621 35678999999999877654 567777666 4444332 22333333
26701
26702
26703 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVI--GAAASSV-SIMVANILRLFKIPQISYASTA-PELSDNTRYDFFSRVVPPD 199 (908)
26704 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vI--g~~~s~~-~~~va~~~~~~~iP~Is~~~~~-~~l~~~~~~~~~~~~~~~~ 199 (908)
26705 +. .++++++| |+.++.. +..+...+...++|+|++.+.. ..+++...+++++++.+++
26706 T Consensus 58 ~~------------------~~~v~~vi~~g~~~s~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (363)
26707 T 6E7S_D 58 MS------------------DRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQFGPSI 119 (363)
26708 T ss_dssp HH------------------HSCEEEEEEECSSCCTHHHHHHHHHHHHHTCCEEEEEGGGGSCCCSCCTTCCEEESSCCH
26709 T ss_pred Hh------------------hCCceEEEEcCCCCHHHHHHHHHHHHHhhCCCEEEecCCCcccccCCCccceeEEcCCCH
26710 Confidence 32 14789999 8877753 6677778888999999887643 2333333578999999999
26711
26712
26713 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPR-PGEFEKIIKRLLETPNARAV 278 (908)
26714 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~vi 278 (908)
26715 ...++++++++.+++|+++++++.+++++....+.+++.+++. ++++.....++.... ..++...+++++. .++++|
26716 T Consensus 120 ~~~~~~~~~~~~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~v 197 (363)
26717 T 6E7S_D 120 EQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENS-FVGWELEEVLLLDMSLDDGDSKIQNQLKK-LQSPII 197 (363)
26718 T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECSSTTHHHHHHHHHHHHHSC-SSCCEEEEEEECCTTSCCTTCHHHHHHTT-CCCSEE
26719 T ss_pred HHHHHHHHHHHHHcCCeEEEEEEEcCCChHHHHHHHHHHHhhc-CCCeEEEEEEEecCCCCCchHHHHHHHHh-CCCCEE
26720 Confidence 9899999999988899999999987778887888888877765 355543222211011 2245566777763 578988
26721
26722
26723 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNV 357 (908)
26724 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (908)
26725 ++......+..+++++++.|+.. ++.|+..+.+...... . ......+.+.+
26726 T Consensus 198 v~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~-~~~~~~g~~~~-------------------------- 249 (363)
26727 T 6E7S_D 198 LLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDT-V-PSEFPTGLISV-------------------------- 249 (363)
26728 T ss_dssp EEESCHHHHHHHHHHHHHTTCSSTTCEEEECHHHHCSTTC-C-CTTSCTTCEEE--------------------------
26729 T ss_pred EEeCCHHHHHHHHHHHHHcCCCCCCeEEEeecCCCCCCCC-C-CccCCCceEEE--------------------------
26730 Confidence 88877777788899888888753 4567665422211000 0 00000110000
26731
26732
26733 Q NP_000836.2 358 WFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG--YIGLCPRM- 434 (908)
26734 Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~--~~~~~~~~- 434 (908)
26735 .+ . .+ ...++..+|||++++++|++++....+.. ....|...
26736 T Consensus 250 ~~----~-~~------------------------------~~~~~~~~ydav~~~~~al~~~~~~~~~~~~~~~~c~~~~ 294 (363)
26737 T 6E7S_D 250 SY----D-EW------------------------------DYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSCYNTH 294 (363)
26738 T ss_dssp EC----T-TS------------------------------SSCHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCSCSTTTT
26739 T ss_pred ee----c-cc------------------------------ccChhHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCC
26740 Confidence 00 0 00 01235678999999999999987532110 01122211
26741
26742
26743 Q NP_000836.2 435 --STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWA 505 (908)
26744 Q Consensus 435 --~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~ 505 (908)
26745 ...++..+.++|++..|.| | ++.|+++|++. ..+.|++++. ...++.||.|+... ++...+.|+
26746 T Consensus 295 ~~~~~~~~~l~~~l~~~~~~g--g-~i~f~~~g~~~~~~~~i~~~~~---~~~~~~vg~w~~~~-l~~~~~~w~ 361 (363)
26747 T 6E7S_D 295 EKRIYQSNMLNRYLINVTFEG--R-DLSFSEDGYQMHPKLVIILLNK---ERKWERVGKWKDKS-LQMKYYVWP 361 (363)
26748 T ss_dssp TTTTTCCSTTHHHHTSCEETT--E-ECCBCTTSBBSSCCEEEEEECT---TSCEEEEEEEETTE-EEESCSSCC
26749 T ss_pred cccchhhHHHHHHHcceEecC--e-eeeeCCCCccccceEEEEEeeC---CCceEEEEEEECCe-eEeeceecC
26750 Confidence 1124556778888888987 7 89999999875 5788888873 25688999998762 333346663
26751
26752
26753 No 80
26754 >3HSY_B Glutamate receptor 2; GLUTAMATE RECEPTOR, LIGAND-GATED ION CHANNEL; HET: BMA, NAG, SO4; 1.75A {Rattus norvegicus}
26755 Probab=99.53 E-value=6.1e-19 Score=188.94 Aligned_cols=357 Identities=15% Similarity=0.172 Sum_probs=218.5 Template_Neff=12.200
26756
26757 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRI-LDTCSRDTYALEQSLTFVQA 122 (908)
26758 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~-~d~~~~~~~a~~~~~~~~~~ 122 (908)
26759 ++++||+++|.++. ....|+++|++++|+. |+++++.+ .|+.+++.. +.+.+.+
26760 T Consensus 1 ~~i~Ig~~~~~~~~----------------~~~~~~~~a~~~~n~~-----g~~i~~~~~~~~~~~~~~----~~~~~~~ 55 (376)
26761 T 3HSY_B 1 NSIQIGGLFPRGAD----------------QEYSAFRVGMVQFSTS-----EFRLTPHIDNLEVANSFA----VTNAFCS 55 (376)
26762 T ss_dssp CEEEEEEEEETTCH----------------HHHHHHHHHHHHHCCS-----SCEEEEEEEEECTTCHHH----HHHHHHH
26763 T ss_pred CceeEEEEecCCCh----------------HHHHHHHHHHHHhcCC-----CceeceeEEecCCCChHH----HHHHHHH
26764 Confidence 36899999998752 4678999999999975 35677765 344444332 2233333
26765
26766
26767 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
26768 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
26769 ++. ++++++||+.++.....++.+++..++|+|++..... ..+++++++.|+ .
26770 T Consensus 56 l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~-----~~~~~~~~~~p~---~ 108 (376)
26771 T 3HSY_B 56 QFS-------------------RGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTD-----GTHPFVIQMRPD---L 108 (376)
26772 T ss_dssp HHH-------------------HTCSEEEECCCTTTHHHHHHHHHHHTCEEEECSCCCS-----SCCTTEEECSCC---C
26773 T ss_pred HHh-------------------cCeeEEEecCChHHHHHHHHHHhhcCCeEEecCCCCC-----CCCCcEEEecCC---H
26774 Confidence 332 4788999998887777888889999999998764332 246889999887 3
26775
26776
26777 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPRE--PRPGEFEKIIKRLLETPNARAVIM 280 (908)
26778 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
26779 ++++++++.+++|+++++++.++ ++....+.+.+.+++. ++++......+.. .+..++...+++++. .++++|++
26780 T Consensus 109 ~~~~~~~l~~~~~~~v~il~~~~-~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vv~ 185 (376)
26781 T 3HSY_B 109 KGALLSLIEYYQWDKFAYLYDSD-RGLSTLQAVLDSAAEK-KWQVTAINVGNINNDKKDETYRSLFQDLEL-KKERRVIL 185 (376)
26782 T ss_dssp HHHHHHHHHHTTCCEEEEEECTT-TCSHHHHHHHHHHHHH-TCEEEEEEGGGTTSTTHHHHHHHHHCCCCC-SCCCEEEE
26783 T ss_pred HHHHHHHHHHhCCCEEEEEEeCc-chHHHHHHHHHHHhhc-CceEEEEEeecCCCCCCccchHHHHHHccc-cCCcEEEE
26784 Confidence 67778888888999999999665 7777777777777664 3555432221100 112345666777763 57899888
26785
26786
26787 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
26788 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
26789 .+.......+++++++.|+.. .+.|+..+........ ........+...+... . ...+....|
26790 T Consensus 186 ~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~----~~~~~~~~f 249 (376)
26791 T 3HSY_B 186 DCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDL-LKIQFGGANVSGFQIV-----------D----YDDSLVSKF 249 (376)
26792 T ss_dssp CSCGGGHHHHHHHHHHHSSSGGGCEEEECSSBGGGSCC-CTTTTTTCEEEEEESS-----------C----TTSHHHHHH
26793 T ss_pred ECCHHHHHHHHHHHHHhCCCcCCeEEEEecCCCCcccH-HHhccCCeeEEEEEEe-----------c----CCChHHHHH
26794 Confidence 877777888999998888753 3456655321111000 0000001111111000 0 001111223
26795
26796
26797 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG----YIGLCPRM- 434 (908)
26798 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~----~~~~~~~~- 434 (908)
26799 .+.+++.+..... .. ....+..++..+|||++++++|++++....+.. ....|...
26800 T Consensus 250 ~~~~~~~~~~~~~----------~~---------~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~~~c~~~~ 310 (376)
26801 T 3HSY_B 250 IERWSTLEEKEYP----------GA---------HTATIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANP 310 (376)
26802 T ss_dssp HHHHTTSCTTTST----------TC---------SSSCCCHHHHHHHHHHHHHHHHHTTSCCCCCCCCCCCCTTHHHHSC
26803 T ss_pred HHHHHccChhhCC----------CC---------CCCCCChHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCccCCCC
26804 Confidence 3333322211000 00 001234567889999999999999876432110 00122110
26805
26806
26807 Q NP_000836.2 435 --STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQL 495 (908)
26808 Q Consensus 435 --~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~~ 495 (908)
26809 ...++..+.+.|++..|.|.+| ++.|+++|++.. .+.+++++ .+.++.+|.|....
26810 T Consensus 311 ~~~~~~~~~l~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~i~~~~----~~~~~~vg~w~~~~ 369 (376)
26811 T 3HSY_B 311 AVPWGQGVEIERALKQVQVEGLSG-NIKFDQNGKRINYTINIMELK----TNGPRKIGYWSEVD 369 (376)
26812 T ss_dssp CCCHHHHHHHHHHHHTCCEEETTE-EECBCTTSCBCSCEEEEEEEE----TTEEEEEEEEETTT
26813 T ss_pred CCCchhhHHHHHHHhcCCcccCCe-eEEECCCCceeeeEEEEEEee----cCCcEEEEEEeCCC
26814 Confidence 0124556778888889999988 899999898875 88888887 25688999998653
26815
26816
26817 No 81
26818 >3SAJ_B Glutamate receptor 1; Rossmann fold, ion channel, membrane; HET: MAN, BMA, NAG; 2.5A {Rattus norvegicus}
26819 Probab=99.53 E-value=6.5e-19 Score=189.48 Aligned_cols=357 Identities=17% Similarity=0.268 Sum_probs=217.5 Template_Neff=11.900
26820
26821 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
26822 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
26823 ...++++||+++|.++ .....|+++|++++|+++++++++++ +...|+.. ..+.+
26824 T Consensus 6 ~~~~~i~ig~~~p~~~----------------~~~~~~~~~a~~~~n~~~~~~~~~~~-~~~~d~~~--------~~~~~ 60 (384)
26825 T 3SAJ_B 6 AMPNNIQIGGLFPNQQ----------------SQEHAAFRFALSQLTEPPKLLPQIDI-VNISDSFE--------MTYRF 60 (384)
26826 T ss_dssp CCCSEEEEEEEESSSS----------------CHHHHHHHHHHHTCCSSSEEEEEEEE-CCTTCHHH--------HHHHH
26827 T ss_pred CCCCceeEEEEeCCCC----------------hHHHHHHHHHHHHccCCCccCCccEE-ecCCcHHH--------HHHHH
26828 Confidence 4567899999999875 24668999999999987766655555 44444321 11122
26829
26830
26831 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
26832 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
26833 .+++. ++++++||+.++..+..++..+...++|+|++.+.... ..++++. .+++
26834 T Consensus 61 ~~~~~-------------------~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~-----~~~~~~~-~~~~- 114 (384)
26835 T 3SAJ_B 61 CSQFS-------------------KGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVDT-----SNQFVLQ-LRPE- 114 (384)
26836 T ss_dssp HHHHH-------------------HTCSCEEECCCTTTHHHHHHHHHHHTCCEEECSCCCSS-----CCTTEEE-CSCC-
26837 T ss_pred HHhhh-------------------cCeEEEEecCCHHHHHHHHHHHhhcCCcEEeCCCCCCC-----CCceEEE-echh-
26838 Confidence 22221 47889999888877777788889999999998754321 1233333 3333
26839
26840
26841 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
26842 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
26843 .+.++++++++++|++|++++ ++.++....+.+++.+++. ++++.....++ .+..++...+++++. .++|+|++
26844 T Consensus 115 -~~~~~~~~~~~~~~~~v~vi~-~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~~~~~~~~~~~~-~~~~~iv~ 188 (384)
26845 T 3SAJ_B 115 -LQEALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAEK-NWQVTAVNILT--TTEEGYRMLFQDLEK-KKERLVVV 188 (384)
26846 T ss_dssp -CHHHHHHHHHHHTCCEEEEEE-CHHHHTTHHHHHHHHHHHH-TCEEEEEETTT--CCHHHHHHHHHHHHH-SSSCEEEE
26847 T ss_pred -HHHHHHHHHHHcCCCEEEEEE-cCccchHHHHHHHHHHHhc-CCceEEEEecc--CCccchHHHHHHHhh-cCCcEEEE
26848 Confidence 678888888888999999999 6677877788888877765 35554433232 122355666777763 57899888
26849
26850
26851 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSD-SWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVW 358 (908)
26852 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (908)
26853 .........+++++++.|+.. .+.|+..+ .|..... ........+...... + . ...+....
26854 T Consensus 189 ~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~----------~-~----~~~~~~~~ 251 (384)
26855 T 3SAJ_B 189 DCESERLNAILGQIVKLEKNGIGYHYILANLGFMDIDL--NKFKESGANVTGFQL----------V-N----YTDTIPAR 251 (384)
26856 T ss_dssp ECCHHHHHHHHHHHHHTTCSSTTCEEEEECSBTTSSCC--SSSTTTSCEEEEEEC----------C-C----TTSHHHHH
26857 T ss_pred ECCHHHHHHHHHHHHHhccccCCeEEEEeeCCccccCH--HHHhccCCceEEEEE----------E-c----CCCchHHH
26858 Confidence 877777788999998888753 46677654 2322110 000000111111000 0 0 00111222
26859
26860
26861 Q NP_000836.2 359 FAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG----YIGLCPRM 434 (908)
26862 Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~----~~~~~~~~ 434 (908)
26863 +.+.|++.+.. .|.... ...+..++..+|||++++++++++.....+.. ....|...
26864 T Consensus 252 f~~~~~~~~~~-------------~~~~~~------~~~~~~~~~~~ydav~~~~~al~~~~~~~~~~~~~~~~~~c~~~ 312 (384)
26865 T 3SAJ_B 252 IMQQWRTSDSR-------------DHTRVD------WKRPKYTSALTYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLAN 312 (384)
26866 T ss_dssp HHHHHHHHHHH-------------C------------CCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCSCCCSCCB
26867 T ss_pred HHHHHHccCcc-------------CCCCCC------CCCCcchHHHHHHHHHHHHHHHHHHHHCCCCchhcCCCCCcccC
26868 Confidence 33333333221 010000 01234567789999999999999887543210 01122211
26869
26870
26871 Q NP_000836.2 435 ---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQL 495 (908)
26872 Q Consensus 435 ---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~~ 495 (908)
26873 ...++..+.+.|++..|.|.+| ++.||++|++.. .+.+++++ ++.++.||.|+...
26874 T Consensus 313 ~~~~~~~~~~l~~~l~~~~f~g~~G-~~~f~~~g~~~~~~~~i~~~~----~~~~~~vg~w~~~~ 372 (384)
26875 T 3SAJ_B 313 PAVPWGQGIDIQRALQQVRFEGLTG-NVQFNEKGRRTNYTLHVIEMK----HDGIRKIGYWNEDD 372 (384)
26876 T ss_dssp SCCCCTTHHHHHHHHHTCEEEETTE-EEEBCTTSBBCSCCEEEEEEE----TTEEEEEEEEETTT
26877 T ss_pred CCCCcccHHHHHHHHhcCCccCCcc-eEEECCCCCeeeeEEEEEEee----eCceEEeEEEcCCC
26878 Confidence 0114456778888888999988 899999888753 56666665 35789999998653
26879
26880
26881 No 82
26882 >3N6V_D Glutamate receptor 2; AMPA, assembly, NTD, GluR2, GluA2; 3.2A {Rattus norvegicus}
26883 Probab=99.52 E-value=6.9e-19 Score=188.37 Aligned_cols=355 Identities=15% Similarity=0.178 Sum_probs=216.7 Template_Neff=12.200
26884
26885 Q NP_000836.2 46 IILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRI-LDTCSRDTYALEQSLTFVQALI 124 (908)
26886 Q Consensus 46 i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~-~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
26887 ++||+++|.++. ....|+++|++++|+. |.++++.+ .|+.+++.. ..+.+++++
26888 T Consensus 1 i~ig~~~~~~g~----------------~~~~~~~~a~~~in~~-----g~~l~~~~~~~~~~~~~~----~~~~~~~l~ 55 (374)
26889 T 3N6V_D 1 IQIGGLFPRGAD----------------QEYSAFRVGMVQFSTS-----EFRLTPHIDNLEVANSFA----VTNAFCSQF 55 (374)
26890 T ss_dssp CEEEEEEETTCH----------------HHHHHHHHHHHHHCCS-----SCCCEEEEEEECTTCHHH----HHHHHHHHH
26891 T ss_pred CceeeeeCCCCH----------------HHHHHHHHHHHHhhCC-----CceeceeEEecCCCChHH----HHHHHHHHH
26892 Confidence 578999988752 4678999999999975 35667665 455444332 222333333
26893
26894
26895 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
26896 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
26897 . ++++++||+.++.....++.++...+||+|++..... ..+++++++.|+ .+.
26898 T Consensus 56 ~-------------------~~v~~iig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~-----~~~~~~~~~~~~---~~~ 108 (374)
26899 T 3N6V_D 56 S-------------------RGVYAIFGFYDKKSVNAITSFCGTLHVSFITPSFPTD-----GTHPFVIQMRPD---LKG 108 (374)
26900 T ss_dssp H-------------------HTCSEEEECCCTTTHHHHHHHHHHHTCEEEECSCCCS-----SCCSSEEECSCC---HHH
26901 T ss_pred h-------------------cCeeEEEecCChHHHHHHHHHHHhcCCceeeCCCCCC-----CCCCcEEEecCC---HHH
26902 Confidence 2 4788999998887777778889999999998764321 246889999887 367
26903
26904
26905 Q NP_000836.2 205 AMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPRE--PRPGEFEKIIKRLLETPNARAVIMFA 282 (908)
26906 Q Consensus 205 ~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~viv~~~ 282 (908)
26907 ++++++.+++|+++++++.++ ++....+.+.+.+++. ++++......+.. .+..++...+++++. .++++|++.+
26908 T Consensus 109 ~~~~~~~~~~~~~v~iv~~~~-~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vv~~~ 185 (374)
26909 T 3N6V_D 109 ALLSLIEYYQWDKFAYLYDSD-RGLSTLQAVLDSAAEK-KWQVTAINVGNINNDKKDETYRSLFQDLEL-KKERRVILDC 185 (374)
26910 T ss_dssp HHHHHHHHTTCCEEEEEECGG-GCSHHHHHHHHHHHHT-TCEEEEEECTTCCSTTHHHHHHTTSTTTTT-TTCCEEEEES
26911 T ss_pred HHHHHHHHhCCcEEEEEEeCC-cchhhHHHHHHHHHhc-CCeEEEEEeccCCCCCCccchHHHHHHHcc-cCCcEEEEEC
26912 Confidence 778888788999999999655 7777777777777664 3555432221100 112356666777763 5789988887
26913
26914
26915 Q NP_000836.2 283 NEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAE 361 (908)
26916 Q Consensus 283 ~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (908)
26917 ....+..+++++++.|+.. .+.|+..+........ ........+...+... . ...+....|.+
26918 T Consensus 186 ~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~----~~~~~~~~f~~ 249 (374)
26919 T 3N6V_D 186 ERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDL-LKIQFGGANVSGFQIV-----------D----YDDSLVSKFIE 249 (374)
26920 T ss_dssp CHHHHHHHHHHHHHTTCSSTTCEEEECSSBSSSSCC-GGGTTTSCEEEEEESS-----------C----TTSHHHHHHHH
26921 T ss_pred CHHHHHHHHHHHHHcCCccCceEEEEecCCCCcccH-hHhhcCCeeEEEEEEE-----------c----CCChHHHHHHH
26922 Confidence 7777888999998888753 3456655321111000 0000011111111100 0 00111122333
26923
26924
26925 Q NP_000836.2 362 FWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG----YIGLCPRM--- 434 (908)
26926 Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~----~~~~~~~~--- 434 (908)
26927 .|++.+..... .. ....+..++..+||+++++++|++++....+.. ....|...
26928 T Consensus 250 ~~~~~~~~~~~-------------~~------~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~~~c~~~~~~ 310 (374)
26929 T 3N6V_D 250 RWSTLEEKEYP-------------GA------HTATIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAV 310 (374)
26930 T ss_dssp HHTTSCTTTST-------------TC------SSSCCCHHHHHHHHHHHHHHHHHHTTTTTTCCCCC----CCTTCSSCC
26931 T ss_pred HHHcCChhhCC-------------CC------CCCccchhHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCccCCCCC
26932 Confidence 33322211000 00 001234567789999999999999886432110 00122110
26933
26934
26935 Q NP_000836.2 435 STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQL 495 (908)
26936 Q Consensus 435 ~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~~ 495 (908)
26937 ...++..+.+.|++..|.|.+| ++.|+++|++.. .+.+++++ .+.++.+|.|+...
26938 T Consensus 311 ~~~~~~~l~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~i~~~~----~~~~~~vg~w~~~~ 367 (374)
26939 T 3N6V_D 311 PWGQGVEIERALKQVQVEGLSG-NIKFDQNGKRINYTINIMELK----TNGPRKIGYWSEVD 367 (374)
26940 T ss_dssp CCTTHHHHHHHHHTCEEEETTE-EEEBCTTSCBCSCEEEEEEEC----SSCEEEEEEEETTT
26941 T ss_pred CccchHHHHHHHhcCccccCCe-eEEECCCCCeeeeEEEEEEee----cCCcEEEEEEeCCC
26942 Confidence 0124556778888888999988 899999998875 78888887 24788999998653
26943
26944
26945 No 83
26946 >4GNR_A ABC transporter substrate-binding protein-branched chain; amino acid-binding protein, surface-exposed protein; 1.0A {Streptococcus pneumoniae}
26947 Probab=99.52 E-value=7e-19 Score=186.67 Aligned_cols=347 Identities=15% Similarity=0.192 Sum_probs=213.1 Template_Neff=12.100
26948
26949 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
26950 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
26951 ...++++||+++|.++... ..+.....+++.|++++|+.+++ .++++++...|+.+++.. ..+.+
26952 T Consensus 3 ~~~~~~~Ig~~~~~~~~~~----------~~~~~~~~~~~~a~~~~n~~~~~-~~~~~~~~~~d~~~~~~~----~~~~~ 67 (353)
26953 T 4GNR_A 3 VEEKTIKIGFNFEESGSLA----------AYGTAEQKGAQLAVDEINAAGGI-DGKQIEVVDKDNKSETAE----AASVT 67 (353)
26954 T ss_dssp ---CEEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHHHHTTCB-TTBEEEEEEEECTTCHHH----HHHHH
26955 T ss_pred ccCceEEEEEEecCCCCch----------HHcHHHHHHHHHHHHHHHHCCCC-CCcceEEEEecCCCChHH----HHHHH
26956 Confidence 3457899999999876421 35667888999999999987654 357788877777655432 33333
26957
26958
26959 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
26960 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
26961 ++++. .++++++||+.++.....+...+...++|+|.+....+.+.. ..++++++.++..
26962 T Consensus 68 ~~l~~------------------~~~v~~iig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~~~ 127 (353)
26963 T 4GNR_A 68 TNLVT------------------QSKVSAVVGPATSGATAAAVANATKAGVPLISPSATQDGLTK--GQDYLFIGTFQDS 127 (353)
26964 T ss_dssp HHHHH------------------TSCCSEEECCCSHHHHHHHHHHHHHTTCCEEESSCCCTTTTT--TCTTEEECSCCHH
26965 T ss_pred HHHHh------------------cCCeeEEECCCChHHHHHHHHHHHHhCCCEEecCCCCCcCcC--CCCceeEecCChH
26966 Confidence 33332 147899998877766667777888899999998765544332 2467788888888
26967
26968
26969 Q NP_000836.2 201 YQAQAMVDIVT-ALGWNYVSTLASE-GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
26970 Q Consensus 201 ~~~~~~~~~l~-~~~~~~v~ii~~~-~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
26971 ..++++++++. +++|+++++++.+ +.++....+.+.+... ..+.....+. .+..+....++++++ .+++++
26972 T Consensus 128 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~i 200 (353)
26973 T 4GNR_A 128 FQGKIISNYVSEKLNAKKVVLYTDNASDYAKGIAKSFRESYK----GEIVADETFV--AGDTDFQAALTKMKG-KDFDAI 200 (353)
26974 T ss_dssp HHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHHHHCC----SEEEEEEEEC--TTCCCCHHHHHHHHT-SCCSEE
26975 T ss_pred HHHHHHHHHHHHHcCCCEEEEEEcCcchHHHHHHHHHHHHcC----CceeeEEEec--CCCCCHHHHHHHhhc-CCCCEE
26976 Confidence 88888898885 5789999998855 4555555555554322 2222211121 122345566777763 578888
26977
26978
26979 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVW 358 (908)
26980 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (908)
26981 ++......+..+++++++.|+. ..|++.+.+...............+.+...... .. ....+....
26982 T Consensus 201 i~~~~~~~~~~~~~~~~~~g~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--~~~~~~~~~ 266 (353)
26983 T 4GNR_A 201 VVPGYYNEAGKIVNQARGMGID--KPIVGGDGFNGEEFVQQATAEKASNIYFISGFS----------TT--VEVSAKAKA 266 (353)
26984 T ss_dssp ECCSCHHHHHHHHHHHHHTTCC--SCEEECGGGCSHHHHHHHCTTTCCSEEEEESCC----------SS--SSCCHHHHH
26985 T ss_pred EEcCCHHHHHHHHHHHHHCCCC--CCEEeccccccHHHHHHhchhhhcCEEEEeccc----------CC--cccCHHHHH
26986 Confidence 7776666778888888888773 456665543321110000001111211111000 00 000011112
26987
26988
26989 Q NP_000836.2 359 FAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTID 438 (908)
26990 Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~ 438 (908)
26991 |.+.+.+.++ ..++.++..+||+++++++++++...
26992 T Consensus 267 f~~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~----------------- 302 (353)
26993 T 4GNR_A 267 FLDAYRAKYN---------------------------EEPSTFAALAYDSVHLVANAAKGAKN----------------- 302 (353)
26994 T ss_dssp HHHHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHTTCSS-----------------
26995 T ss_pred HHHHHHHHHC---------------------------CCCChHHHHHHHHHHHHHHHHhcCCC-----------------
26996 Confidence 2222222111 11235678899999999999987531
26997
26998
26999 Q NP_000836.2 439 GKELLGYIRA-VNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWT 492 (908)
27000 Q Consensus 439 ~~~l~~~l~~-~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~ 492 (908)
27001 ++.+.+.|++ ..|.|.+| ++.|+++|++...+.+.+++ ++.++.+|.|+
27002 T Consensus 303 ~~~~~~~l~~~~~~~g~~G-~~~f~~~~~~~~~~~v~~~~----~~~~~~~~~~~ 352 (353)
27003 T 4GNR_A 303 SGEIKDNLAKTKDFEGVTG-QTSFDADHNTVKTAYMMTMN----NGKVEAAEVVK 352 (353)
27004 T ss_dssp HHHHHHHHHTCCCEEETTE-EECCCTTSCCCCCEEEEEEE----TTEEEEEEEEC
27005 T ss_pred hHHHHHHHhcCCCCCCCcc-eeEEcCCCCccceEEEEEEE----CCEEEEeeeeC
27006 Confidence 2346677766 47889988 89999988887778888776 35788888885
27007
27008
27009 No 84
27010 >3N0X_A Possible substrate binding protein of; Receptor family ligand binding region; HET: GOL; 1.5A {Rhodopseudomonas palustris}
27011 Probab=99.52 E-value=7.4e-19 Score=188.33 Aligned_cols=348 Identities=14% Similarity=0.174 Sum_probs=214.4 Template_Neff=11.600
27012
27013 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
27014 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
27015 +++++||+++|.++... ..+.....|++.|++++|+.++.++|.++++.+.|+++++..+ .+.+++
27016 T Consensus 2 ~~~i~Ig~~~~~~g~~~----------~~~~~~~~g~~~a~~~~n~~g~~~~g~~i~~~~~d~~~~~~~~----~~~~~~ 67 (374)
27017 T 3N0X_A 2 ADDLKIALIYGKTGPLE----------AYAKQTETGLMMGLEYATKGTMTLDGRKIVVITKDDQSKPDLS----KAALAE 67 (374)
27018 T ss_dssp --CEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHHTTTCCEETTEEEEEEEEECTTCHHHH----HHHHHH
27019 T ss_pred CCceEEEEEeCCCCCch----------HHHHHHHHHHHHHHHHhhcCCCccCCeEEEEEEecCCCChHHH----HHHHHH
27020 Confidence 46799999999887431 3566788999999999998554355788999988887765433 333344
27021
27022
27023 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
27024 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
27025 ++.+ +++++++|+.++.....++..+...++|++...+.++.+.+...+++++++.++....
27026 T Consensus 68 l~~~------------------~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (374)
27027 T 3N0X_A 68 AYQD------------------DGADIAIGTSSSAAALADLPVAEENKKILIVEPAVADQITGEKWNRYIFRTGRNSSQD 129 (374)
27028 T ss_dssp HHHT------------------SCCSEEEECSSHHHHHHHHHHHHHHTCCEEECSCCCGGGGTTTCCTTEEECSCCHHHH
27029 T ss_pred HHhh------------------cCCCEEEecCCcHHHHhHHHHHHHcCCEEEeCCCCchHHhCCCCCccEEEccCCchhH
27030 Confidence 3321 5788999988777777788888889999998776555443322467889999988888
27031
27032
27033 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET----PNARAV 278 (908)
27034 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~vi 278 (908)
27035 +.++++++.+ .|++|++++.++.++....+.+++.+++. ++++.....+. .+..++...+++++.. .++++|
27036 T Consensus 130 ~~~~~~~~~~-~~~~v~iv~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~v 205 (374)
27037 T 3N0X_A 130 AISNAVAIGK-QGVTIATLAQDYAFGRDGVAAFKEALAKT-GATLATEEYVP--TTTTDFTAVGQRLFDALKDKPGKKII 205 (374)
27038 T ss_dssp HHHHHHHHCC-TTEEEEEEEESSHHHHHHHHHHHHHHTTT-TCEEEEEEEEC--TTCCCCHHHHHHHHHHHTTCSSEEEE
27039 T ss_pred HHHHHHHHHh-cCCEEEEEecCcHHHHHHHHHHHHHHHHc-CCeeceeeecC--CCCCChHHHHHHHHHHhcCCCCCCeE
27040 Confidence 8888887765 67899999977778888888888888765 45654433332 2233455566666521 145666
27041
27042
27043 Q NP_000836.2 279 IMFA-NEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNV 357 (908)
27044 Q Consensus 279 v~~~-~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (908)
27045 ++.. .......++++++..++. ..|+..+.+.... ... ....+........ .. ....+...
27046 T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~---------~~---~~~~~~~~ 267 (374)
27047 T 3N0X_A 206 WVIWAGGGDPLTKLQDMDPKRYG--IELSTGGNILPAL---AAY-KRLPGMEGATYYY---------YD---IPKNPINE 267 (374)
27048 T ss_dssp EECCCSSSCHHHHHHHTCGGGGT--EEEEECCCCTTGG---GGG-GGSTTCEEEESCC---------TT---SCCSHHHH
27049 T ss_pred EEEEecCCcHHHHHHhccccccC--ceeccccchHHHH---HHH-hhCCCceeeeecc---------cc---CCCChhhH
27050 Confidence 5533 344455666666665542 2344332221100 000 0011111100000 00 00011122
27051
27052
27053 Q NP_000836.2 358 WFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTI 437 (908)
27054 Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~ 437 (908)
27055 .|.+.+++.++ ..++.++..+|||+++++.|++++.. .
27056 T Consensus 268 ~f~~~~~~~~~---------------------------~~p~~~~~~~yda~~~~~~al~~~~~---------------~ 305 (374)
27057 T 3N0X_A 268 WLVTEHQKRFN---------------------------APPDFFTAGGFSAAMAVVTAVQKAKS---------------T 305 (374)
27058 T ss_dssp HHHHHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHHTS---------------C
27059 T ss_pred HHHHHHHHHHC---------------------------CCCChhHHHHHHHHHHHHHHHHHcCC---------------C
27060 Confidence 23332322221 11235678899999999999988642 1
27061
27062
27063 Q NP_000836.2 438 DGKELLGYIRAVNFNGSAGTPVTFNE-NGDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
27064 Q Consensus 438 ~~~~l~~~l~~~~f~G~~G~~v~Fd~-~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
27065 ++..+.++|++..|+|.+| ++.|++ ++++...+.+++++.. + +|.|+..
27066 T Consensus 306 ~~~~i~~~l~~~~~~g~~G-~i~f~~~~~~~~~~~~i~~~~~~---~----~~~w~~~ 355 (374)
27067 T 3N0X_A 306 DTEKLIAAMEGMEFDTPKG-KMVFRKEDHQALQSMYHFKVKVD---P----AVAWAVL 355 (374)
27068 T ss_dssp CHHHHHHHHTTCEEEETTE-EEEECTTTCBEECCEEEEEEECC---T----TSSSCEE
27069 T ss_pred CHHHHHHHHcCCceecCCe-eEEeCCCCCeeeeeeEEEEEcCC---h----hhhcccc
27070 Confidence 3456778888888999888 899987 5555567777776621 1 5677654
27071
27072
27073 No 85
27074 >6KSP_B Glutamate receptor ionotropic, delta-1; complex, membrane protein; 8.1A {Rattus norvegicus}
27075 Probab=99.52 E-value=7.5e-19 Score=210.74 Aligned_cols=372 Identities=15% Similarity=0.185 Sum_probs=225.3 Template_Neff=11.500
27076
27077 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILD-TCSRDTYALEQSLTFVQA 122 (908)
27078 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d-~~~~~~~a~~~~~~~~~~ 122 (908)
27079 ++++||+++|.++. ....|+++|++++|+++++++|+++++++.| +++++..+ .+.+++
27080 T Consensus 2 ~~i~Ig~l~p~sg~----------------~~~~g~~~a~~~in~~~g~~~~~~i~~~~~d~~~~~~~~~----~~~~~~ 61 (856)
27081 T 6KSP_B 2 SIIHIGAIFEENAA----------------KDDRVFQLAVSDLSLNDDILQSEKITYSIKVIEANNPFQA----VQEACD 61 (856)
27082 T ss_dssp CCCBCCEEECSCCH----------------HHHHHHHHHHHHHHSSCSSSTTCCCBCCEEECCSSCCHHH----HHHHHH
27083 T ss_pred ceeeeeeeeccccc----------------CchHHHHHHHHHHhcCcccccccceeEEeEeccCCCHHHH----HHHHHH
27084 Confidence 57999999998752 5678999999999998877767899999888 55554332 233333
27085
27086
27087 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS-- 200 (908)
27088 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~-- 200 (908)
27089 ++. ++++++||+.++..+.+++..+...++|+|++ +..+.+.. .++++++..+++.
27090 T Consensus 62 l~~-------------------~~v~~viG~~~s~~~~~~~~~~~~~~ip~i~~-~~~~~~~~--~~~~~~~~~~~~~~~ 119 (856)
27091 T 6KSP_B 62 LMT-------------------QGILALVTSTGCASANALQSLTDAMHIPHLFV-QRNPGGSP--RTACHLNPSPDGEAY 119 (856)
27092 T ss_dssp HTT-------------------TCCSCCCCBCCSTTSHHHHHHHHTTTCCEEEC-CCCTTSCC--CCCCCCCSCCTTTCC
27093 T ss_pred Hhh-------------------cCeeEEecCCCchhHHHHHHHHHhcCCCEEEe-ecCCCCCC--CcccccccCCCCCce
27094 Confidence 332 57899999988887778888899999999998 44443332 3455666655554
27095
27096
27097 Q NP_000836.2 201 --------YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPR---E---PRPGEFEKII 266 (908)
27098 Q Consensus 201 --------~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~---~---~~~~~~~~~~ 266 (908)
27099 .++.++++++++++|+++++++ +++++....+.+.+.+++. ++++.....++. + ....+....+
27100 T Consensus 120 ~~~~~p~~~~~~~l~~~~~~~~~~~v~il~-~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l 197 (856)
27101 T 6KSP_B 120 TLASRPPVRLNDVMLRLVTELRWQKFVMFY-DSEYDIRGLQSFLDQASRL-GLDVSLQKVDKNISHVFTSLFTTMKTEEL 197 (856)
27102 T ss_dssp EEECSCCCCHHHHHHHHHHHHTCCSCEEEE-CTTCCGGGGTTHHHHHHHT-TCCCEEEECCSCHHHHHHHHHHHCCHHHH
27103 T ss_pred eeecCCCccHHHHHHHHHHHcCCcEEEEEE-eCCchHHHHHHHHHHHHhh-CCeEEEEEccCChhHhcHHHHhhhcHHHH
27104 Confidence 7788888888888999999999 6667777777777777664 355433222110 0 0122334556
27105
27106
27107 Q NP_000836.2 267 KRLLETPNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYF 345 (908)
27108 Q Consensus 267 ~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (908)
27109 +++++ . .+.+++.+....+..+++++++.|+.. .+.|+..+.+...............+.......
27110 T Consensus 198 ~~~~~-~-~~~vv~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 264 (856)
27111 T 6KSP_B 198 NRYRD-T-LRRAILLLSPQGAHSFINEAVETNLASKDSHWVFVNEEISDPEILDLVHSALGRMTVVRQI----------- 264 (856)
27112 T ss_dssp HHHHH-H-HTEEEECSCHHHHHHHHHHHHHTTCCCTTCEEEECCSCCCHHHHHHHHHHCSSBCEEEECC-----------
27113 T ss_pred Hhchh-h-cceEEEEcChHHHHHHHHHHHHcCCCCCCceEEEEcCCCCChhHHHHHhhhcccceEEehh-----------
27114 Confidence 66653 3 344444455667888899998888753 356666543322111000000011111111000
27115
27116
27117 Q NP_000836.2 346 RSRTLANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP 425 (908)
27118 Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~ 425 (908)
27119 . ...+....|.+.+++.+.+. |..... ....+..++..+|||++++++|++++....+.
27120 T Consensus 265 ~----~~~~~~~~f~~~~~~~~~~~-------------~~~~~~----~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~ 323 (856)
27121 T 6KSP_B 265 F----PSAKDNQKCMRNNHRISSLL-------------CDPQEG----YLQMLQISNLYLYDSVLMLANAFHRKLEDRKW 323 (856)
27122 T ss_dssp C----CCSCCSSTTBCSSCBCCSST-------------TTTCTT----TSTTCCHHHHHHHHHHHHHHHHHHHHHTTTCC
27123 T ss_pred c----CCcchhHHHHhhcccccccc-------------cCCCcc----ccccccHHHHHHHHHHHHHHHHHHHHHHcCCc
27124 Confidence 0 00111222333333332210 000000 00123456788999999999999987643211
27125
27126
27127 Q NP_000836.2 426 G--YIGLCPRM---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITN-KSTEYKVIGHWTNQ 494 (908)
27128 Q Consensus 426 ~--~~~~~~~~---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~-~~~~~~~Vg~~~~~ 494 (908)
27129 . ....|... ...++..+.++|++..|.|.+| ++.||++|++. ..+.+++++..+ ....+..||.|...
27130 T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~g~~G-~v~f~~~g~~~~~~~~i~~~~~~~~~~~~~~~v~~~~~~ 398 (856)
27131 T 6KSP_B 324 HSMASLNCIRKSTKPWNGGRSMLDTIKKGHITGLTG-VMEFREDSSNPYVQFEILGTTYSETFGKDMRKLATWDSE 398 (856)
27132 T ss_dssp CCCCSCCSSSSCCCCCSTTHHHHHHHHTCCCCSSSS-CCCCCTTCBCCCCEEEEEECCCBTTTBCCCCCCEEEETT
27133 T ss_pred ccccccccccCCCCCccCchhHHHHHHhCceeeeee-eEEecCCCCCceEEEEEEeeccCCcCCcceEEEEEEeCC
27134 Confidence 0 01112110 1124567888888889999998 89999999875 578888887431 12367889999864
27135
27136
27137 No 86
27138 >3N6V_B Glutamate receptor 2; AMPA, assembly, NTD, GluR2, GluA2; 3.2A {Rattus norvegicus}
27139 Probab=99.52 E-value=8.3e-19 Score=187.76 Aligned_cols=355 Identities=15% Similarity=0.178 Sum_probs=216.6 Template_Neff=12.200
27140
27141 Q NP_000836.2 46 IILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRI-LDTCSRDTYALEQSLTFVQALI 124 (908)
27142 Q Consensus 46 i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~-~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
27143 ++||+++|.++. ....|+++|++++|+. |.++++.+ .|+.+++.. ..+.+++++
27144 T Consensus 1 i~ig~~~~~~g~----------------~~~~~~~~a~~~in~~-----g~~l~~~~~~~~~~~~~~----~~~~~~~l~ 55 (374)
27145 T 3N6V_B 1 IQIGGLFPRGAD----------------QEYSAFRVGMVQFSTS-----EFRLTPHIDNLEVANSFA----VTNAFCSQF 55 (374)
27146 T ss_pred CeEEEEccCCCH----------------HHHHHHHHHHHHHHHC-----CCEEEEEEEeCCCCCHHH----HHHHHHHHH
27147 Confidence 578999988752 4678999999999975 35667665 455444332 222333333
27148
27149
27150 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
27151 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
27152 . ++++++||+.++.....++.++...+||+|++..... ..+++++++.|+ .+.
27153 T Consensus 56 ~-------------------~~v~~iig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~-----~~~~~~~~~~~~---~~~ 108 (374)
27154 T 3N6V_B 56 S-------------------RGVYAIFGFYDKKSVNAITSFCGTLHVSFITPSFPTD-----GTHPFVIQMRPD---LKG 108 (374)
27155 T ss_pred h-------------------cCCCEEECCCChHHHHHHHHHHHhhCCCEECCCcCCC-----ccCCceeecCHH---HHH
27156 Confidence 2 4788999998887777778888999999998764321 246889999887 367
27157
27158
27159 Q NP_000836.2 205 AMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPRE--PRPGEFEKIIKRLLETPNARAVIMFA 282 (908)
27160 Q Consensus 205 ~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~viv~~~ 282 (908)
27161 ++++++.+++|++++++++++ ++....+.+.+.+++. ++++......+.. .+..++...+++++. .++++|++.+
27162 T Consensus 109 ~~~~~~~~~~~~~v~iv~~~~-~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vv~~~ 185 (374)
27163 T 3N6V_B 109 ALLSLIEYYQWDKFAYLYDSD-RGLSTLQAVLDSAAEK-KWQVTAINVGNINNDKKDETYRSLFQDLEL-KKERRVILDC 185 (374)
27164 T ss_pred HHHHHHHHhCCCeEEEEEeCc-hhHHHHHHHHHHHHHC-CCEEEEEEeeCCCCCCCCCCHHHHHHHHHH-cCCCEEEEeC
27165 Confidence 778888788999999999655 7777777777777664 3555432221100 122356666777763 5789988887
27166
27167
27168 Q NP_000836.2 283 NEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAE 361 (908)
27169 Q Consensus 283 ~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (908)
27170 ....+..+++++++.|+.. .+.|+..+........ ........+...+... . ...+....|.+
27171 T Consensus 186 ~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~----~~~~~~~~f~~ 249 (374)
27172 T 3N6V_B 186 ERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDL-LKIQFGGANVSGFQIV-----------D----YDDSLVSKFIE 249 (374)
27173 T ss_pred CHHHHHHHHHHHHHcCCCCCCcEEEEecCCCCCCch-HHhhccccceeeeeec-----------C----CCCHHHHHHHH
27174 Confidence 7777888999998888753 3456655321111000 0000011111111100 0 00111122333
27175
27176
27177 Q NP_000836.2 362 FWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG----YIGLCPRM--- 434 (908)
27178 Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~----~~~~~~~~--- 434 (908)
27179 .|++.+..... .. ....+..++..+||+++++++|++++....+.. ....|...
27180 T Consensus 250 ~~~~~~~~~~~-------------~~------~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~~~c~~~~~~ 310 (374)
27181 T 3N6V_B 250 RWSTLEEKEYP-------------GA------HTATIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAV 310 (374)
27182 T ss_pred HHHHHhCCCCC-------------CC------CCCCCccHHHHHHHHHHHHHHHHHHHhhcCCcccCCCCCCccCCCCCC
27183 Confidence 33322211000 00 001234567789999999999999886432110 00122110
27184
27185
27186 Q NP_000836.2 435 STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQL 495 (908)
27187 Q Consensus 435 ~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~~ 495 (908)
27188 ...++..+.+.|++..|.|.+| ++.|+++|++.. .+.+++++ .+.++.+|.|....
27189 T Consensus 311 ~~~~~~~l~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~i~~~~----~~~~~~vg~w~~~~ 367 (374)
27190 T 3N6V_B 311 PWGQGVEIERALKQVQVEGLSG-NIKFDQNGKRINYTINIMELK----TNGPRKIGYWSEVD 367 (374)
27191 T ss_pred CCCCHHHHHHHHHcCcccCCCc-ceEeCCCCCcCCCeEEEEEEe----CCceEEeEEEeCCC
27192 Confidence 0124556778888889999988 899999998875 78888887 24788999998653
27193
27194
27195 No 87
27196 >1Z17_A Leu/Ile/Val-binding protein; periplasmic binding proteins, alpha-beta fold; 1.96A {Escherichia coli}
27197 Probab=99.52 E-value=8.4e-19 Score=185.21 Aligned_cols=333 Identities=20% Similarity=0.234 Sum_probs=211.1 Template_Neff=12.300
27198
27199 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
27200 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
27201 +++||++.|.++... ..+.....+++.|++++|+.+++. |+++++.+.|+.+++. ...+.+++++
27202 T Consensus 2 ~~~Ig~~~~~~~~~~----------~~~~~~~~~~~~a~~~~n~~~~~~-g~~i~~~~~d~~~~~~----~~~~~~~~l~ 66 (344)
27203 T 1Z17_A 2 DIKVAVVGAMSGPVA----------QYGDQEFTGAEQAVADINAKGGIK-GNKLQIVKYDDACDPK----QAVAVANKVV 66 (344)
27204 T ss_dssp CEEEEEEECSSSTTH----------HHHHHHHHHHHHHHHHHHHTTTBT-TBCEEEEEEECTTCHH----HHHHHHHHHH
27205 T ss_pred CeEEEEEecCCCchH----------HhhHHHHHHHHHHHHHHHHCCCcC-CceEEEEEEcCCCCHH----HHHHHHHHHH
27206 Confidence 689999999875321 245678899999999999876543 6778888777665532 2223333333
27207
27208
27209 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
27210 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
27211 . ++++++|++.++.....+...+...++|+|.+....+.+... .+++++++.+++...+.
27212 T Consensus 67 ~-------------------~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 126 (344)
27213 T 1Z17_A 67 N-------------------DGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTAR-GYQLILRTTGLDSDQGP 126 (344)
27214 T ss_dssp H-------------------TTCCEEEECCSHHHHHHHHHHHHHHTCEEEESSCCCGGGGSS-CCSSEEESSCCHHHHHH
27215 T ss_pred h-------------------cCCCEEEcCCCCcchHHHHHHHHHHCCeEEecCCCCHHHHhc-CCCeEEEecCCcccchH
27216 Confidence 2 478899988766655566677788899999987655443221 24677888888888888
27217
27218
27219 Q NP_000836.2 205 AMVDIVT-ALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFAN 283 (908)
27220 Q Consensus 205 ~~~~~l~-~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~~ 283 (908)
27221 .+++++. +.+|+++++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .+++++++...
27222 T Consensus 127 ~~~~~l~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ii~~~~ 202 (344)
27223 T 1Z17_A 127 TAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQDGLKKG-NANVVFFDGIT--AGEKDFSTLVARLKK-ENIDFVYYGGY 202 (344)
27224 T ss_dssp HHHHHCCCCCCCSSEEEEECSSHHHHHHHHHHHHHHHHT-TCCEEEEEECC--TTCCCCHHHHHHHHH-TTCCEEEEESC
27225 T ss_pred HHHHHHHHHcCCCEEEEEEcCCchhHHHHHHHHHHHHhC-CCEEeEEeccC--CCCCChHHHHHHHHH-CCCCEEEEecC
27226 Confidence 8888884 4589999999976667777788888887765 35543322222 122345556666653 47888877765
27227
27228
27229 Q NP_000836.2 284 EDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAEFW 363 (908)
27230 Q Consensus 284 ~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (908)
27231 +..+..+++++++.|+ ++.|++.+.+...... ........+.+...+.. ....+....|.+.+
27232 T Consensus 203 ~~~~~~~~~~~~~~g~--~~~~i~~~~~~~~~~~-~~~~~~~~g~~~~~~~~--------------~~~~~~~~~f~~~~ 265 (344)
27233 T 1Z17_A 203 HPEMGQILRQARAAGL--KTQFMGPEGVANVSLS-NIAGESAEGLLVTKPKN--------------YDQVPANKPIVDAI 265 (344)
27234 T ss_dssp HHHHHHHHHHHHHTTC--CCEEEECGGGCSHHHH-HHHGGGGTTCEEEECCC--------------GGGSGGGHHHHHHH
27235 T ss_pred chHHHHHHHHHHHcCC--CcEEEcCCcccCHHHH-HHhhhhcCCeEEEcCCC--------------CCCCcchHHHHHHH
27236 Confidence 6667788899888887 3567766543322110 00111122322211100 00001111222222
27237
27238
27239 Q NP_000836.2 364 EENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKELL 443 (908)
27240 Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~~l~ 443 (908)
27241 ++.++ ..++.++..+|||++++++++++.. ++..+.
27242 T Consensus 266 ~~~~~---------------------------~~~~~~~~~~yda~~~~~~a~~~~~-----------------~~~~l~ 301 (344)
27243 T 1Z17_A 266 KAKKQ---------------------------DPSGAFVWTTYAALQSLQAGLNQSD-----------------DPAEIA 301 (344)
27244 T ss_dssp HTTTC---------------------------CCCSHHHHHHHHHHHHHHHHHTTCS-----------------CHHHHH
27245 T ss_pred HHHHC---------------------------CCCChHHHHHHHHHHHHHHHHhcCC-----------------CHHHHH
27246 Confidence 22111 1123457789999999999987631 234577
27247
27248
27249 Q NP_000836.2 444 GYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQI 478 (908)
27250 Q Consensus 444 ~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~ 478 (908)
27251 ++|++..|.|.+| ++.|+++|++. ..+.+.+++.
27252 T Consensus 302 ~~l~~~~~~g~~G-~i~f~~~g~~~~~~~~i~~~~~ 336 (344)
27253 T 1Z17_A 302 KYLKANSVDTVMG-PLTWDEKGDLKGFEFGVFDWHA 336 (344)
27254 T ss_dssp HHHHHSCEEETTE-EECBCTTSCBTTCCCEEEEECT
27255 T ss_pred HHHHhCCCCcCce-eeEeCCCCCcCcceEEEEEEec
27256 Confidence 7788888999998 89999989876 5777887773
27257
27258
27259 No 88
27260 >4RU0_B Putative branched-chain amino acid ABC; ABC transporter permease, Structural Genomics; HET: MSE, GOL, P3G; 2.442A {Pseudomonas protegens Pf-5}
27261 Probab=99.51 E-value=1e-18 Score=192.27 Aligned_cols=370 Identities=12% Similarity=0.111 Sum_probs=225.6 Template_Neff=11.600
27262
27263 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINK-DPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
27264 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~-~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
27265 ....++++||++.|.++... ..+.....|++.|++++|+ .+++. |+++++.+.|+++++.. ..+
27266 T Consensus 28 ~~~~~~~~ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~n~~~g~~~-g~~v~~~~~d~~~~~~~----~~~ 92 (447)
27267 T 4RU0_B 28 QAGPDQQFFPLATYRVGAYA----------SSGVQVWAGMIDYLNYINQVEGGIN-GVKLVWQECETEWTAEK----GIE 92 (447)
27268 T ss_dssp --CTTSEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHHHHTTCSBT-TBCEEEEEEECTTCHHH----HHH
27269 T ss_pred hcCCCceEEEEeeccCCCcc----------ccchhHHHHHHHHHHHHHHhcCCcC-CeEeEEEEEcCCCCHHH----HHH
27270 Confidence 34567899999999875421 2566788999999999997 55443 67788887777655332 333
27271
27272
27273 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
27274 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
27275 .+++++.+ ..+.+++++++.++.....+...+...++|+|.+.+..+.+.+....++++++.++
27276 T Consensus 93 ~~~~l~~~----------------~~~~~~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~ 156 (447)
27277 T 4RU0_B 93 CYERFKNG----------------LDGAPVAVYQPNGAPAAYALSERAEVDKIPLITLGYGRTEATDGTVFPYNFPVMLT 156 (447)
27278 T ss_dssp HHHHHTTC----------------BTTBCBSCBCCCSHHHHHHHHHHHHHTTCCEECTTCSCGGGGCTTTCTTEECCSCC
27279 T ss_pred HHHHHHhc----------------CCCCCEEEEcCCCcHHHHHHHHHHHHcCCCEEEcCCCchhhcCCCCCCccccccCC
27280 Confidence 34443320 00367788888777666677778888999999987765543321235678899999
27281
27282
27283 Q NP_000836.2 199 DSYQAQAMVDIVTA-------LGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE 271 (908)
27284 Q Consensus 199 ~~~~~~~~~~~l~~-------~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~ 271 (908)
27285 +...++.+++++.+ .+|++|++++.++.++..+.+.+++.+++. ++++... .+. ....+....+++++.
27286 T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~il~~~~~~~~~~~~~~~~~~~~~-g~~v~~~-~~~--~~~~~~~~~~~~~~~ 232 (447)
27287 T 4RU0_B 157 FYSEASTLVNYIAQREGGFDRLKGKKIATLYHDSAYGRETLGPLKLLAEKY-GFENIQI-PVA--DPGNEQSAQWRQIRQ 232 (447)
27288 T ss_dssp HHHHHHHHHHHHHHHHTSGGGGTTCEEEEEEESSHHHHTTHHHHHHHHHHH-CCEEEEE-EEC--TTCCCCHHHHHHHHH
27289 T ss_pred hHHHHHHHHHHHHHhcCCccccCCCEEEEEecCChHhHhcHHHHHHHHHHh-CCEEEEE-EeC--CCCCchHHHHHHHHH
27290 Confidence 88888899998865 689999999966667777888888888775 4555431 121 122345566666663
27291
27292
27293 Q NP_000836.2 272 TPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLA 351 (908)
27294 Q Consensus 272 ~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (908)
27295 .++|++++...+..+..+++++++.|+.. .++..+.|...............+.+...... .. .
27296 T Consensus 233 -~~~~~i~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~---~ 296 (447)
27297 T 4RU0_B 233 -QNPDWVFLRTWGVSTPVAVKTAARFGFPV--DHIIGDIWASSSEDVLPAGAAAKGYLALTPYP----------AG---S 296 (447)
27298 T ss_dssp -HCCSEEEEECCTTHHHHHHHHHHHTTCCG--GGEEECGGGCSGGGTGGGGGGGTTCEEEESSC----------CC---S
27299 T ss_pred -hCCCEEEEEcCCccHHHHHHHHHHcCCCC--cEEEeeccCCCchhhHhhHHhhCCeEEeecCC----------CC---C
27300 Confidence 57888887765666778889988888753 23333323221100000111122222211100 00 0
27301
27302
27303 Q NP_000836.2 352 NNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLC 431 (908)
27304 Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~ 431 (908)
27305 ..+....|.+.+++.+...+.. ....++.++..+|||+++++++++++......
27306 T Consensus 297 ~~~~~~~f~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~yda~~~~~~al~~~~~~~g~------ 350 (447)
27307 T 4RU0_B 297 DFEIHKRLKQYILDTGKSDLKD--------------------LKNFGSVYYNSGLVNAAVAVEAIRTAQGKFGK------ 350 (447)
27308 T ss_dssp CSTTHHHHCCCCCTTTCCSCSC--------------------GGGTTSHHHHHHHHHHHHHHHHHHHHHHHHCS------
27309 T ss_pred CCHHHHHHHHHHHHhCCCcccc--------------------ccccCChhHHHHHHHHHHHHHHHHHHHHhcCC------
27310 Confidence 0011112222222211100000 00112456788999999999999987532100
27311
27312
27313 Q NP_000836.2 432 PRMSTIDGKELLGYIRAVNF----------NGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
27314 Q Consensus 432 ~~~~~~~~~~l~~~l~~~~f----------~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
27315 ...++..+.+.|++..+ .|.+| ++.|+++|++. ..+.+++++ ++.++.++.|...
27316 T Consensus 351 ---~~~~~~~l~~~l~~~~~~~~~~~~~~~~G~~G-~i~f~~~~~~~~~~~~i~~~~----~g~~~~v~~~~~~ 416 (447)
27317 T 4RU0_B 351 ---RPLNGEEGRWGLEHLNIDDARLKDMGYLGLMQ-NLKLSCRDHEGGGAARVQQWD----GANWTLISEWIAA 416 (447)
27318 T ss_dssp ---SCCCHHHHHHHHHTCEECHHHHHHHTCTTTSC-CEECCSSCSCCCCEEEEEEEC----SSCEEECCCCEEC
27319 T ss_pred ---CCCChHHHHHHHHhccCCchHHhccCcccccc-CeeecCCCCcccceEEEEEEe----CCeEEEcceeEec
27320 Confidence 01245567777777666 67888 89999888764 467788886 3578899988754
27321
27322
27323 No 89
27324 >5EWM_D NMDA glutamate receptor subunit, Glutamate; Glutamate receptor, allosteric modulator, GluN2B; HET: MAN, 5SM, NAG, BMA; 2.76A {Xenopus laevis}
27325 Probab=99.51 E-value=1e-18 Score=186.31 Aligned_cols=349 Identities=15% Similarity=0.211 Sum_probs=214.9 Template_Neff=11.900
27326
27327 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
27328 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
27329 .++++||+++|.++ ...|+++|++++|+.++.. +.++++... ++.++.. ..+.+.+
27330 T Consensus 2 ~~~i~Ig~~~~~~~------------------~~~~~~~a~~~in~~~~~~-~~~i~l~~~-~~~~~~~----~~~~~~~ 57 (364)
27331 T 5EWM_D 2 PPSIGIAVILVGTS------------------DEVAIKDAHEKDDFHHLSV-VPRVELVAM-NETDPKS----IITRICD 57 (364)
27332 T ss_dssp CCEEEEEEEEESSC------------------CHHHHHC------CCCSSS-EEEEEEEEE-CCCSHHH----HHHHHHH
27333 T ss_pred CCeeeEEEEEeCCC------------------chHHHHHHHHhcCCCcCcc-CCceEEEee-CCCCHHH----HHHHHHH
27334 Confidence 46789999998652 4578999999999875432 455666655 3444322 2233333
27335
27336
27337 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVI--GAAASS-VSIMVANILRLFKIPQISYASTAP-ELSDNTRYDFFSRVVPP 198 (908)
27338 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vI--g~~~s~-~~~~va~~~~~~~iP~Is~~~~~~-~l~~~~~~~~~~~~~~~ 198 (908)
27339 ++. .+++++++ |+.++. .+..+..++...++|+|++.+..+ .+.+...+++++++.|+
27340 T Consensus 58 l~~------------------~~~v~~vi~~g~~~s~~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (364)
27341 T 5EWM_D 58 LMS------------------DRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQFGPS 119 (364)
27342 T ss_dssp HHH------------------HSCEEEEEEECSSCCTHHHHHHHHHHHHHTCCEEEEEGGGSSCCCSCCTTCCEEESSCC
27343 T ss_pred HHh------------------cCCceEEEEcCCCChHHHHHHHHHHHHhhCCCEEeecCCCcccccCcccCcceeecCCC
27344 Confidence 332 14789999 887775 466777788889999999876542 33333357899999999
27345
27346
27347 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPR-PGEFEKIIKRLLETPNARA 277 (908)
27348 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~v 277 (908)
27349 +...++++++++++++|+++++++.++.++....+.+++.+++. ++++.....+..... ..++...+++++. .++++
27350 T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~il~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~ 197 (364)
27351 T 5EWM_D 120 IEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENS-FVGWELEEVLLLDMSLDDGDSKIQNQLKK-LQSPI 197 (364)
27352 T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEESSTTHHHHHHHHHHHHHSC-CSSCEEEEEEEECCSSCCTTCHHHHHHTT-CCCSE
27353 T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEEcCCchHHHHHHHHHHHHhh-CCcEEEEEEEecCCCCCcchHHHHHHHHh-CCCCE
27354 Confidence 98889999999988899999999987777777778888877765 355443222210011 2345566666753 57888
27355
27356
27357 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRN 356 (908)
27358 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (908)
27359 |++.+....+..+++++++.|+.. .+.|+..+.+...... .......+.+.+ .
27360 T Consensus 198 v~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~---------------------~--- 251 (364)
27361 T 5EWM_D 198 ILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDT--VPAEFPTGLISV---------------------S--- 251 (364)
27362 T ss_dssp EEEESCHHHHHHHHHHHHHTTCSSTTCEEEECHHHHCSTTC--CCTTSCTTCEEE---------------------E---
27363 T ss_pred EEEeCCHHHHHHHHHHHHHcCCCCCcEEEEeecCCCCCCCC--CCccCCCcEEEE---------------------e---
27364 Confidence 888877777788899998888753 3566665422111000 000000010000 0
27365
27366
27367 Q NP_000836.2 357 VWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG--YIGLCPRM 434 (908)
27368 Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~--~~~~~~~~ 434 (908)
27369 . ..+ ...++..+|||++++++|++++....+.. ....|...
27370 T Consensus 252 --~-----~~~------------------------------~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~c~~~ 294 (364)
27371 T 5EWM_D 252 --Y-----DEW------------------------------DYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSCYNT 294 (364)
27372 T ss_dssp --E-----CTT------------------------------TSCHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCSCSSCS
27373 T ss_pred --e-----cCc------------------------------ccCccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCccccC
27374 Confidence 0 000 01235679999999999999886532110 01223211
27375
27376
27377 Q NP_000836.2 435 ---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWA 505 (908)
27378 Q Consensus 435 ---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~ 505 (908)
27379 ...++..+.++|++..|.| | .+.|+++|++. ..+.|++++. +..++.||.|+... +....+.|+
27380 T Consensus 295 ~~~~~~~~~~l~~~l~~~~~~g--g-~~~f~~~g~~~~~~~~i~~~~~---~~~~~~vg~w~~~~-l~~~~~~w~ 362 (364)
27381 T 5EWM_D 295 HEKRIYQSNMLNRYLINVTFEG--R-DLSFSEDGYQMHPKLVIILLNK---ERKWERVGKWKDKS-LQMKYYVWP 362 (364)
27382 T ss_dssp GGGGGGCCCTTHHHHTSCCCC-----CCCBCTTSBBSSCCEEEEEECT---TSCEEEEEEECSSC-EEESCSSCC
27383 T ss_pred ccceeehHHHHHHHheeeEecC--e-eeeeCCCCccccceEEEEEecC---CccEEEeEEEECCe-eeeeceecC
27384 Confidence 1124566778888888988 7 89999999886 5788888873 24688999998762 322345563
27385
27386
27387 No 90
27388 >4MLC_A Extracellular ligand-binding receptor; Structural Genomics, PSI-Biology, Midwest Center; HET: MSE, SO4; 2.705A {Desulfitobacterium hafniense}
27389 Probab=99.51 E-value=1.1e-18 Score=185.42 Aligned_cols=346 Identities=20% Similarity=0.252 Sum_probs=211.0 Template_Neff=12.200
27390
27391 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
27392 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
27393 ....++++||+++|.+. .+.....+++.|++++|+.+++ .|.++++.+.|+.+++.. ..+.
27394 T Consensus 5 ~~~~~~~~Ig~~~~~~~--------------~~~~~~~~~~~a~~~~n~~~~~-~g~~~~~~~~d~~~~~~~----~~~~ 65 (356)
27395 T 4MLC_A 5 VNPSEEIFIGVAWPFAS--------------LDDLFAEGLELAVQEINEQGGV-QGRKLSLVKADDEAELEK----GLAI 65 (356)
27396 T ss_dssp ----CEEEEEEEECCTT--------------CCSSHHHHHHHHHHHHHTTTTB-TTBEEEEEEEECTTCHHH----HHHH
27397 T ss_pred cCCCCcEEEEEEcCCCC--------------ccHHHHHHHHHHHHHHHHcCCc-CCeeEEEEEEcCcccHHH----HHHH
27398 Confidence 34567899999999642 3456788999999999987654 367788888887665432 2333
27399
27400
27401 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
27402 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
27403 +++++. .++++++|++.++.....+...+...++|+|++....+.+... .+++++++.+++
27404 T Consensus 66 ~~~l~~------------------~~~v~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~-~~~~~~~~~~~~ 126 (356)
27405 T 4MLC_A 66 AQAFAD------------------NAGIQAVIGHRNSFISIPAASIYDQAGLVMLSPASTSPDLTDH-GYIHVFRNIPSD 126 (356)
27406 T ss_dssp HHHHHT------------------CTTEEEEECCSSHHHHHHHHHHHHHHTCEEEESSCCCGGGGSS-CCSSEEESSCCH
27407 T ss_pred HHHHHH------------------cCCccEEEcCCCchhhHHHHHHHHHhCCeEEEcCcCCcccccC-CCCCeEECCCCH
27408 Confidence 333332 1478999988776666666777888999999887655443221 356788899988
27409
27410
27411 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
27412 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
27413 ...++.+++++.+.+|+++++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .++++++
27414 T Consensus 127 ~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~v~ 202 (356)
27415 T 4MLC_A 127 QEIARQLAIYLAEQGHERMVIYYTDDSYGNGLANAFEDYARAQ-GITIVDRFNYY--GNLKDLERLYDKWQA-FGMDGIF 202 (356)
27416 T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECSSHHHHHHHHHHHHHHHHT-TCEEEEEESCC--CSHHHHHHHHHHHHH-HTCCEEE
27417 T ss_pred HHHHHHHHHHHHHcCCCEEEEEEcCCcchhHHHHHHHHHHHHC-CCeEeEEEecC--CCCccHHHHHHHHHH-cCCCEEE
27418 Confidence 8888999999888899999999966667777888888888775 45554322221 122345556666653 4778887
27419
27420
27421 Q NP_000836.2 280 MFANE-DDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAP--VYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRN 356 (908)
27422 Q Consensus 280 ~~~~~-~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (908)
27423 +.... ..+..+++++++.|+. .+|++.+.|...... .........+.+..... ... ...+..
27424 T Consensus 203 ~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~---~~~~~~ 267 (356)
27425 T 4MLC_A 203 IAKTATGGGTEFLVDAKSVGIE--VPLIAGNSWDALSLTEDIENIGMTAEGLLVGSFF----------NPQ---RPDSRT 267 (356)
27426 T ss_dssp EESCCCCCCHHHHHHHHHHTCC--SCEEECGGGCC----------CGGGTTCEEEEEC----------CTT---CSSHHH
27427 T ss_pred EEecCccchHHHHHHHHHcCCC--CCEEecCccchhchHHHHHHhhhhhcCeEEEecC----------CCC---CCChhH
27428 Confidence 76543 3567788888887773 456655544321100 00000111121111100 000 000111
27429
27430
27431 Q NP_000836.2 357 VWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMST 436 (908)
27432 Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~ 436 (908)
27433 ..|.+.+++.++ ..++.++..+|||++++++|+++...
27434 T Consensus 268 ~~f~~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~--------------- 305 (356)
27435 T 4MLC_A 268 QDFVEAFRREYG---------------------------QPPTSYAAAGYDAVILLAEALEKSDL--------------- 305 (356)
27436 T ss_dssp HHHHHHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHTTSCS---------------
27437 T ss_pred HHHHHHHHHHHC---------------------------CCCCHHHHHHHHHHHHHHHHHHhCCC---------------
27438 Confidence 122222222111 11235677899999999999987642
27439
27440
27441 Q NP_000836.2 437 IDGKELLGYIRA-VNFNGSAGTPVTFNENGDAPGRYD-IFQYQITNKSTEYKVIG 489 (908)
27442 Q Consensus 437 ~~~~~l~~~l~~-~~f~G~~G~~v~Fd~~G~~~~~~~-i~~~~~~~~~~~~~~Vg 489 (908)
27443 .+++.+.+.|++ ..|.|.+| .+.|+++|++...+. +.++. ++.++.+|
27444 T Consensus 306 ~~~~~~~~~l~~~~~~~g~~G-~~~f~~~g~~~~~~~~~~~~~----~g~~~~~~ 355 (356)
27445 T 4MLC_A 306 THPATLAQGLRDLGPWEGVMG-MHRFDGRGDDIGDLVVLKKMK----DGRFEYLG 355 (356)
27446 T ss_dssp SSTTHHHHHHHHHCSEEETTE-EECBCTTCCBCSSCEEEEEEE----TTEEEEC-
27447 T ss_pred CCHHHHHHHHHhhCCCCCcce-eEEECCCCCcccceEEEEEEE----CCEEEEcC
27448 Confidence 134457777877 47899988 899999888765433 44443 24555554
27449
27450
27451 No 91
27452 >4Q6B_A Extracellular ligand-binding receptor; Structural Genomics, PSI-Biology, Midwest Center; 1.667A {Desulfitobacterium hafniense}
27453 Probab=99.51 E-value=1.1e-18 Score=185.42 Aligned_cols=346 Identities=20% Similarity=0.252 Sum_probs=211.0 Template_Neff=12.200
27454
27455 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
27456 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
27457 ....++++||+++|.+. .+.....+++.|++++|+.+++ .|.++++.+.|+.+++.. ..+.
27458 T Consensus 5 ~~~~~~~~Ig~~~~~~~--------------~~~~~~~~~~~a~~~~n~~~~~-~g~~~~~~~~d~~~~~~~----~~~~ 65 (356)
27459 T 4Q6B_A 5 VNPSEEIFIGVAWPFAS--------------LDDLFAEGLELAVQEINEQGGV-QGRKLSLVKADDEAELEK----GLAI 65 (356)
27460 T ss_dssp ----CEEEEEEEECTTT--------------CCSSHHHHHHHHHHHHHHTTCB-TTBEEEEEEEECTTCHHH----HHHH
27461 T ss_pred cCCCCcEEEEEEcCCCC--------------ccHHHHHHHHHHHHHHHHcCCc-CCeeEEEEEEcCcccHHH----HHHH
27462 Confidence 34567899999999642 3456788999999999987654 367788888887665432 2333
27463
27464
27465 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
27466 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
27467 +++++. .++++++|++.++.....+...+...++|+|++....+.+... .+++++++.+++
27468 T Consensus 66 ~~~l~~------------------~~~v~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~-~~~~~~~~~~~~ 126 (356)
27469 T 4Q6B_A 66 AQAFAD------------------NAGIQAVIGHRNSFISIPAASIYDQAGLVMLSPASTSPDLTDH-GYIHVFRNIPSD 126 (356)
27470 T ss_dssp HHHHHT------------------CTTEEEEECCSSHHHHHHHHHHHHHHTCCEEESSCCCGGGGSS-CCSSEEESSCCH
27471 T ss_pred HHHHHH------------------cCCccEEEcCCCchhhHHHHHHHHHhCCeEEEcCcCCcccccC-CCCCeEECCCCH
27472 Confidence 333332 1478999988776666666777888999999887655443221 356788899988
27473
27474
27475 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
27476 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
27477 ...++.+++++.+.+|+++++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .++++++
27478 T Consensus 127 ~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~v~ 202 (356)
27479 T 4Q6B_A 127 QEIARQLAIYLAEQGHERMVIYYTDDSYGNGLANAFEDYARAQ-GITIVDRFNYY--GNLKDLERLYDKWQA-FGMDGIF 202 (356)
27480 T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECSSHHHHHHHHHHHHHHHHT-TCEEEEEESCC--CSHHHHHHHHHHHHH-TTCCEEE
27481 T ss_pred HHHHHHHHHHHHHcCCCEEEEEEcCCcchhHHHHHHHHHHHHC-CCeEeEEEecC--CCCccHHHHHHHHHH-cCCCEEE
27482 Confidence 8888999999888899999999966667777888888888775 45554322221 122345556666653 4778887
27483
27484
27485 Q NP_000836.2 280 MFANE-DDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAP--VYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRN 356 (908)
27486 Q Consensus 280 ~~~~~-~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (908)
27487 +.... ..+..+++++++.|+. .+|++.+.|...... .........+.+..... ... ...+..
27488 T Consensus 203 ~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~---~~~~~~ 267 (356)
27489 T 4Q6B_A 203 IAKTATGGGTEFLVDAKSVGIE--VPLIAGNSWDALSLTEDIENIGMTAEGLLVGSFF----------NPQ---RPDSRT 267 (356)
27490 T ss_dssp EESCCCCCCHHHHHHHHHHTCC--SCEEECGGGTCC-----------TTTTCEEEEEC----------CTT---CCCHHH
27491 T ss_pred EEecCccchHHHHHHHHHcCCC--CCEEecCccchhchHHHHHHhhhhhcCeEEEecC----------CCC---CCChhH
27492 Confidence 76543 3567788888887773 456655544321100 00000111121111100 000 000111
27493
27494
27495 Q NP_000836.2 357 VWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMST 436 (908)
27496 Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~ 436 (908)
27497 ..|.+.+++.++ ..++.++..+|||++++++|+++...
27498 T Consensus 268 ~~f~~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~--------------- 305 (356)
27499 T 4Q6B_A 268 QDFVEAFRREYG---------------------------QPPTSYAAAGYDAVILLAEALEKSDL--------------- 305 (356)
27500 T ss_dssp HHHHHHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHTSCT---------------
27501 T ss_pred HHHHHHHHHHHC---------------------------CCCCHHHHHHHHHHHHHHHHHHhCCC---------------
27502 Confidence 122222222111 11235677899999999999987642
27503
27504
27505 Q NP_000836.2 437 IDGKELLGYIRA-VNFNGSAGTPVTFNENGDAPGRYD-IFQYQITNKSTEYKVIG 489 (908)
27506 Q Consensus 437 ~~~~~l~~~l~~-~~f~G~~G~~v~Fd~~G~~~~~~~-i~~~~~~~~~~~~~~Vg 489 (908)
27507 .+++.+.+.|++ ..|.|.+| .+.|+++|++...+. +.++. ++.++.+|
27508 T Consensus 306 ~~~~~~~~~l~~~~~~~g~~G-~~~f~~~g~~~~~~~~~~~~~----~g~~~~~~ 355 (356)
27509 T 4Q6B_A 306 THPATLAQGLRDLGPWEGVMG-MHRFDGRGDDIGDLVVLKKMK----DGRFEYLG 355 (356)
27510 T ss_dssp TCGGGHHHHHHHTCSEEETTE-EECBCTTSCBCSSCEEEEEEE----TTEEEEC-
27511 T ss_pred CCHHHHHHHHHhhCCCCCcce-eEEECCCCCcccceEEEEEEE----CCEEEEcC
27512 Confidence 134457777877 47899988 899999888765433 44443 24555554
27513
27514
27515 No 92
27516 >3TD9_A Branched chain amino acid ABC; leucine binding, Structural Genomics, Joint; HET: EDO, PHE; 1.9A {Thermotoga maritima}
27517 Probab=99.51 E-value=1.1e-18 Score=186.24 Aligned_cols=347 Identities=22% Similarity=0.238 Sum_probs=217.8 Template_Neff=11.700
27518
27519 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
27520 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
27521 -++++||++.|.++... ..+.....|++.|++++|.. .|+++++.+.|+.+++.. ..+.+++
27522 T Consensus 14 ~~~i~ig~~~p~sg~~~----------~~~~~~~~g~~~a~~~~~~~----~g~~v~l~~~d~~~~~~~----~~~~~~~ 75 (366)
27523 T 3TD9_A 14 RKVVKIAVILPMTGGIS----------AFGRMVWEGIQIAHEEKPTV----LGEEVELVLLDTRSEKTE----AANAAAR 75 (366)
27524 T ss_dssp --CEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHCCEE----TTEEEEEEEEECTTCHHH----HHHHHHH
27525 T ss_pred CCceEEEEEEccCCCch----------HHHHHHHHHHHHHHHhCCCC----CCeEEEEEEEcCCCCHHH----HHHHHHH
27526 Confidence 46799999999987532 35677889999999988642 367788888887655332 2233333
27527
27528
27529 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
27530 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
27531 ++. .+++++++++.++.....+...+...++|+|.+.+..+.+.. ..++++++.+++...
27532 T Consensus 76 l~~------------------~~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~~~~~ 135 (366)
27533 T 3TD9_A 76 AID------------------KEKVLAIIGEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQ--GRKFVSRVCFIDPFQ 135 (366)
27534 T ss_dssp HHH------------------TSCCSEEEECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGTT--TCSSEEESSCCHHHH
27535 T ss_pred HHH------------------hcCccEEEccCCchHHHHHHHHHHHcCCCEEccCCCCccccC--CCceeeEecCCcHHH
27536 Confidence 332 147889999877766666777788899999998776544322 246778888888888
27537
27538
27539 Q NP_000836.2 203 AQAMVDIV-TALGWNYVSTLAS-EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
27540 Q Consensus 203 ~~~~~~~l-~~~~~~~v~ii~~-~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
27541 ++.+++++ ++.+|+++++++. ++.++..+.+.+++.+++. ++++.. ..+. ....+....+++++. .+++++++
27542 T Consensus 136 ~~~~~~~l~~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~~-g~~~~~-~~~~--~~~~~~~~~~~~~~~-~~~~~iv~ 210 (366)
27543 T 3TD9_A 136 GAAMAVFAYKNLGAKRVVVFTDVEQDYSVGLSNFFINKFTEL-GGQVKR-VFFR--SGDQDFSAQLSVAMS-FNPDAIYI 210 (366)
27544 T ss_dssp HHHHHHCCCCCSCCCEEEEEEETTCHHHHHHHHHHHHHHHHT-TCEEEE-EEEC--TTCCCCHHHHHHHHH-TCCSEEEE
27545 T ss_pred HHHHHHHHHHhcCCCEEEEEEeCCChhhHHHHHHHHHHHHHC-CCeEEE-EEEC--CCCCChHHHHHHHHh-hCCCEEEE
27546 Confidence 88888888 5578999999984 4556667778888877765 355432 1222 122345566666663 57888877
27547
27548
27549 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
27550 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
27551 ...+..+..+++++++.|+.. .+++.+.+...... ........+.+...... .. ....+....|.
27552 T Consensus 211 ~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~~--~~~~~~~~~f~ 275 (366)
27553 T 3TD9_A 211 TGYYPEIALISRQARQLGFTG--YILAGDGADAPELI-EIGGEAVEGLLFTTHYH----------PK--AASNPVAKKFV 275 (366)
27554 T ss_dssp CSCHHHHHHHHHHHHHTTCCS--EEEECGGGCSTHHH-HHHGGGGTTCEEEESCC----------GG--GCCSHHHHHHH
27555 T ss_pred cCCHHHHHHHHHHHHHcCCCc--EEEecCccCcHHHH-HHhhHHhCceEEEecCC----------cc--cCCCHHHHHHH
27556 Confidence 765566777888888888742 33433322211100 00011122322211100 00 00001111222
27557
27558
27559 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
27560 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
27561 +.+++.++ ..++.++..+|||+++++++++++.. .+++
27562 T Consensus 276 ~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~---------------~~~~ 313 (366)
27563 T 3TD9_A 276 EVYKEKYG---------------------------KEPAALNALGYDAYMVLLDAIERAGS---------------FDRE 313 (366)
27564 T ss_dssp HHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHHTS---------------CCHH
27565 T ss_pred HHHHHHHC---------------------------CCCcHHHHHHHHHHHHHHHHHHHcCC---------------CCHH
27566 Confidence 22222111 11234677899999999999988642 1345
27567
27568
27569 Q NP_000836.2 441 ELLGYIRAV-NFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
27570 Q Consensus 441 ~l~~~l~~~-~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
27571 .+.++|++. .|.|.+| ++.|+++|++...+.+.+++ ++.++.+|.|++.
27572 T Consensus 314 ~l~~~l~~~~~~~g~~G-~~~f~~~g~~~~~~~i~~~~----~~~~~~~~~w~~~ 363 (366)
27573 T 3TD9_A 314 KIAEEIRKTRNFNGASG-IINIDENGDAIKSVVVNIVK----NGSVDFEAVINPD 363 (366)
27574 T ss_dssp HHHHHHTTCCSEEETTE-EECBCTTSCBCCCEEEEEEE----TTEEEEEEEECGG
27575 T ss_pred HHHHHHHcCCCcccccE-EEEECCCCCccceEEEEEEE----CCEEEEeEEeCcc
27576 Confidence 677777765 7889888 89999988887788888886 3578888888753
27577
27578
27579 No 93
27580 >3N0W_B ABC branched chain amino acid; Receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
27581 Probab=99.50 E-value=1.7e-18 Score=185.85 Aligned_cols=350 Identities=13% Similarity=0.170 Sum_probs=216.8 Template_Neff=11.800
27582
27583 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
27584 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
27585 ..++++||+++|.++... ...+.....|++.|++++|. + ..|+++++.+.|+.+++.. ..+.++
27586 T Consensus 3 ~~~~~~Ig~i~~~~~~~~---------~~~~~~~~~g~~~a~~~~~~--~-~~g~~i~~~~~d~~~~~~~----~~~~~~ 66 (379)
27587 T 3N0W_B 3 STGQVTLGVLTDMSSVYA---------DSAGKGSVAAVQLAIEDVGG--K-ALGQPVKLVSADYQMKTDV----ALSIAR 66 (379)
27588 T ss_dssp ---CCEEEEEECSSSTTT---------TTSHHHHHHHHHHHHHTTTT--E-ETTEECEEEEEECTTCHHH----HHHHHH
27589 T ss_pred CCccEEEEEEecCCCcch---------hhcCHHHHHHHHHHHHHhCC--c-cCCeeEEEEEEcCCCCHHH----HHHHHH
27590 Confidence 456899999999876421 01456788999999999972 2 2467788888887655432 333344
27591
27592
27593 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
27594 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
27595 +++. .+++++++++.++.....+...+...++|+|.+....+.+.....+++++++.++...
27596 T Consensus 67 ~l~~------------------~~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (379)
27597 T 3N0W_B 67 EWFD------------------RDGVDAIFDVVNSGTALAINNLVKDKKKLAFITAAAADQIGGTECNGYGIGFLYNFTS 128 (379)
27598 T ss_dssp HHHH------------------TSCCCEEEECCSHHHHHHHHHHHHHHTCEEEECSCCCTTTTTTTCCSSEEECSCCHHH
27599 T ss_pred HHHH------------------HhCCCEEEeCCCHHHHHHHHHHHHhcCCeEEEcCccccccCCCccCCceeEcccCHHH
27600 Confidence 4332 1478899998777666666777888899999887655443322235678888888888
27601
27602
27603 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
27604 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
27605 .++++++++.+.+|+++++++.++.++..+.+.+++.+++. ++++.....+. .+..++...+++++. .++|++++.
27606 T Consensus 129 ~~~~~~~~l~~~~~~~i~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~iv~~ 204 (379)
27607 T 3N0W_B 129 IVKTVVQAQLAKGYKTWFLMLPDAAYGDLMNAAIRRELTAG-GGQIVGSVRFP--FETQDFSSYLLQAKA-SGAQLIVST 204 (379)
27608 T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEEC--TTCCCCHHHHHHHHH-TTCSEEEEC
27609 T ss_pred HHHHHHHHHHHcCCCEEEEEccccHHHHHHHHHHHHHHHHC-CCEEEEEEEeC--CCCCChHHHHHHHHH-cCCCEEEEE
27610 Confidence 88888888877899999999976677888888888888775 35554332222 122345566677663 578888777
27611
27612
27613 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQE-EIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
27614 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
27615 ..+..+..+++++++.|+..++.+++.. +...... .... ....+.+.... +.. ...+....|.
27616 T Consensus 205 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~-~~~~~~~~~g~~~~~~----------~~~----~~~~~~~~f~ 268 (379)
27617 T 3N0W_B 205 SGGAANINIMKQAREFGLPSKTQKVGGM-IDILTDV-KSAGLRVMQGQEYATS----------FYW----NMDDRTRAFA 268 (379)
27618 T ss_dssp CCHHHHHHHHHHHHTTTCSCSSCEEECC-BCCHHHH-HHHCHHHHTTCEEEES----------CCT----TSSHHHHHHH
27619 T ss_pred cChHHHHHHHHHHHHcCCCccceeeech-hhHHHHH-HHhchhhhcCCceecc----------ccc----CCCHHHHHHH
27620 Confidence 6666778888898888775333333321 1110000 0000 11112111100 000 0011112222
27621
27622
27623 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
27624 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
27625 +.+++.++ ..++.++..+|||+++++.|++++.. .+++
27626 T Consensus 269 ~~~~~~~~---------------------------~~p~~~~~~~yda~~~~~~al~~~~~---------------~~~~ 306 (379)
27627 T 3N0W_B 269 KRFYAKMG---------------------------KMPTNNQAGGYSAALQYLKAVNAIGS---------------KDPQ 306 (379)
27628 T ss_dssp HHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHHTC---------------CCHH
27629 T ss_pred HHHHHHHC---------------------------CCCChHHHHHHHHHHHHHHHHHHHCC---------------CCHH
27630 Confidence 22222211 11234567899999999999988642 2355
27631
27632
27633 Q NP_000836.2 441 ELLGYIRAVNFN-GSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTN 493 (908)
27634 Q Consensus 441 ~l~~~l~~~~f~-G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~ 493 (908)
27635 .+.++|++..|. |.+| .+.|+++|++...+.+.+++. .. ..+|.|..
27636 T Consensus 307 ~l~~~l~~~~~~~g~~g-~~~f~~~~~~~~~~~i~~~~~----~~-~~~~~w~~ 354 (379)
27637 T 3N0W_B 307 KVFAYLKTIKFDDAVTR-HGTLRPGGRLVRDMYLVRAKK----PE-DQKGDWDY 354 (379)
27638 T ss_dssp HHHHHHTTCCBCSSSCC-SBEECTTSBEECCEEEEEECC----GG-GCCSTTCC
27639 T ss_pred HHHHHHhcCccccCCCC-ceeeCCCCcEEEeEEEEEEcC----Cc-cCCCChhh
27640 Confidence 677888877786 7788 899998887777788888873 12 45677764
27641
27642
27643 No 94
27644 >1PEA_A AMIDASE OPERON, ACETAMIDE; GENE REGULATOR, RECEPTOR, BINDING PROTEIN; 2.1A {Pseudomonas aeruginosa} SCOP: c.93.1.1
27645 Probab=99.49 E-value=1.8e-18 Score=186.08 Aligned_cols=354 Identities=11% Similarity=0.073 Sum_probs=219.0 Template_Neff=11.900
27646
27647 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
27648 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
27649 ..++++||++.|.++... ..+.....+++.|++++|+.+++. |+++++.+.|+.+++.. ..+.++
27650 T Consensus 4 ~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~n~~g~~~-g~~i~~~~~d~~~~~~~----~~~~~~ 68 (385)
27651 T 1PEA_A 4 HQERPLIGLLFSETGVTA----------DIERSQRYGALLAVEQLNREGGVG-GRPIETLSQDPGGDPDR----YRLCAE 68 (385)
27652 T ss_dssp ----CEEEEECCSSSTTH----------HHHHHHHHHHHHHHHHHHTTTTBT-TBCCEEEEECCTTCHHH----HHHHHH
27653 T ss_pred CCCCCEEEEEEcCCCCcc----------hHHHHHHHHHHHHHHHHHHcCCcC-CeeeEEEEECCCCCHHH----HHHHHH
27654 Confidence 457899999999876421 256678899999999999876543 67888888887665432 233334
27655
27656
27657 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
27658 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
27659 +++. .++++++|++.++.....+...+...++|+|++....+. ...++++++.++...
27660 T Consensus 69 ~l~~------------------~~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~----~~~~~~~~~~~~~~~ 126 (385)
27661 T 1PEA_A 69 DFIR------------------NRGVRFLVGCYMSHTRKAVMPVVERADALLCYPTPYEGF----EYSPNIVYGGPAPNQ 126 (385)
27662 T ss_dssp HHHH------------------TTCCCEEEECCSHHHHHHHHHHHHHTTCEEEECSCCCCC----CCCTTEEECSCCGGG
27663 T ss_pred HHHH------------------hcCceEEEeccccHHHHhhHHHHhhcCCEEEecCCCCCC----CCCCcEEEecCChhh
27664 Confidence 3332 147889999887766667777888899999988764321 124678888888888
27665
27666
27667 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
27668 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
27669 .++.+++++.+.+|++|++++.++.++..+.+.+++.+++. ++++.....+.......++...+++++. .++|++++.
27670 T Consensus 127 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ii~~ 204 (385)
27671 T 1PEA_A 127 NSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVMRHLYRQH-GGTVLEEIYIPLYPSDDDLQRAVERIYQ-ARADVVFST 204 (385)
27672 T ss_dssp THHHHHHHHHTTTCSEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEECSSCCHHHHHHHHHHHHH-HTCSEEEEE
27673 T ss_pred hhHHHHHHHHHHhCCcEEEEecCCcchHHHHHHHHHHHHHC-CCeEEEEEEeCCCCCchhHHHHHHHHHH-cCCCEEEEE
27674 Confidence 88889999887899999999976677778888888888765 3555432211110112345566666663 578888777
27675
27676
27677 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
27678 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
27679 ..+..+..+++++++.|+.. .+.|+..+ ...... .........+.+...+.. . ....+....|.
27680 T Consensus 205 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~f~ 269 (385)
27681 T 1PEA_A 205 VVGTGTAELYRAIARRYGDGRRPPIASLT-TSEAEV-AKMESDVAEGQVVVAPYF----------S---SIDTPASRAFV 269 (385)
27682 T ss_dssp CCTHHHHHHHHHHHHHHCSSCCCCEEESS-CCHHHH-TTSCHHHHTTCEEEESCC----------T---TCSSHHHHHHH
27683 T ss_pred ccchHHHHHHHHHHHHhCCCCCCCeeEee-CCHHHH-HhcccchhcCCEEEeccc----------c---CCCCHHHHHHH
27684 Confidence 66667778888888877542 33444332 111000 000011122222111100 0 00011112222
27685
27686
27687 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
27688 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
27689 +.+++.++. ...+..++..+||++++++.++++... .+++
27690 T Consensus 270 ~~~~~~~~~-------------------------~~~~~~~~~~~yda~~~~~~a~~~~~~---------------~~~~ 309 (385)
27691 T 1PEA_A 270 QACHGFFPE-------------------------NATITAWAEAAYWQTLLLGRAAQAAGN---------------WRVE 309 (385)
27692 T ss_dssp HHHHTTSCT-------------------------TCCCCHHHHHHHHHHHHHHHHHHHHTS---------------CCHH
27693 T ss_pred HHHHHhCCC-------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCC---------------CCHH
27694 Confidence 222221110 011234677899999999999987642 1345
27695
27696
27697 Q NP_000836.2 441 ELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTN 493 (908)
27698 Q Consensus 441 ~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~ 493 (908)
27699 .+.+.|++..|.|.+| ++.|+++|++. ..+.+.+++. ++.++.++.++.
27700 T Consensus 310 ~l~~~l~~~~~~g~~g-~~~f~~~~~~~~~~~~i~~~~~---~g~~~~~~~~~~ 359 (385)
27701 T 1PEA_A 310 DVQRHLYDIDIDAPQG-PVRVERQNNHSRLSSRIAEIDA---RGVFQVRWQSPE 359 (385)
27702 T ss_dssp HHHHHHTTCCEEETTE-EEEECTTTSCEEBCCEEEEECT---TSCEEEEEECSS
27703 T ss_pred HHHHHHhcCCcccCCc-eEEEeCCCCeeeeeeEEEEEcC---CCCEeEEEeCCC
27704 Confidence 6778888888999988 89999766653 4667777752 246777776654
27705
27706
27707 No 95
27708 >1QO0_B AMIC, AMIR; BINDING PROTEIN, GENE REGULATOR, RECEPTOR; HET: BMD; 2.25A {PSEUDOMONAS AERUGINOSA} SCOP: c.93.1.1
27709 Probab=99.49 E-value=1.8e-18 Score=186.08 Aligned_cols=354 Identities=11% Similarity=0.073 Sum_probs=219.8 Template_Neff=11.900
27710
27711 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
27712 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
27713 ..++++||++.|.++... ..+.....+++.|++++|+.+++. |+++++.+.|+.+++.. ..+.++
27714 T Consensus 4 ~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~n~~g~~~-g~~i~~~~~d~~~~~~~----~~~~~~ 68 (385)
27715 T 1QO0_B 4 HQERPLIGLLFSETGVTA----------DIERSQRYGALLAVEQLNREGGVG-GRPIETLSQDPGGDPDR----YRLCAE 68 (385)
27716 T ss_dssp ---CCEEEEECCSSSTTH----------HHHHHHHHHHHHHHHHHHHTTTBT-TBCCEEEECCCTTCHHH----HHHHHH
27717 T ss_pred CCCCCEEEEEEcCCCCcc----------hHHHHHHHHHHHHHHHHHHcCCcC-CeeeEEEEECCCCCHHH----HHHHHH
27718 Confidence 457899999999876421 256678899999999999876543 67888888887665432 233334
27719
27720
27721 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
27722 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
27723 +++. .++++++|++.++.....+...+...++|+|++....+. ...++++++.++...
27724 T Consensus 69 ~l~~------------------~~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~----~~~~~~~~~~~~~~~ 126 (385)
27725 T 1QO0_B 69 DFIR------------------NRGVRFLVGCYMSHTRKAVMPVVERADALLCYPTPYEGF----EYSPNIVYGGPAPNQ 126 (385)
27726 T ss_dssp HHHH------------------HSCCCEEEECCSHHHHHHHHHHHHHHTCEEEECSCCCCC----CCCTTEEECSCCGGG
27727 T ss_pred HHHH------------------hcCceEEEeccccHHHHhhHHHHhhcCCEEEecCCCCCC----CCCCcEEEecCChhh
27728 Confidence 3332 147889999887766667777888899999988764321 124678888888888
27729
27730
27731 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
27732 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
27733 .++.+++++.+.+|++|++++.++.++..+.+.+++.+++. ++++.....+.......++...+++++. .++|++++.
27734 T Consensus 127 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ii~~ 204 (385)
27735 T 1QO0_B 127 NSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVMRHLYRQH-GGTVLEEIYIPLYPSDDDLQRAVERIYQ-ARADVVFST 204 (385)
27736 T ss_dssp THHHHHHHHHHHSCSEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEECSSCCHHHHHHHHHHHHH-HTCSEEEEE
27737 T ss_pred hhHHHHHHHHHHhCCcEEEEecCCcchHHHHHHHHHHHHHC-CCeEEEEEEeCCCCCchhHHHHHHHHHH-cCCCEEEEE
27738 Confidence 88889999887899999999976677778888888888765 3555432211110112345566666663 578888777
27739
27740
27741 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
27742 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
27743 ..+..+..+++++++.|+.. .+.|+..+ ...... .........+.+...+.. . ....+....|.
27744 T Consensus 205 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~f~ 269 (385)
27745 T 1QO0_B 205 VVGTGTAELYRAIARRYGDGRRPPIASLT-TSEAEV-AKMESDVAEGQVVVAPYF----------S---SIDTPASRAFV 269 (385)
27746 T ss_dssp CCSTTHHHHHHHHHHHSCSSSCCCEEESS-CCHHHH-TTSCHHHHTTCEEEESCC----------T---TCCSHHHHHHH
27747 T ss_pred ccchHHHHHHHHHHHHhCCCCCCCeeEee-CCHHHH-HhcccchhcCCEEEeccc----------c---CCCCHHHHHHH
27748 Confidence 66667778888888877542 33444332 111000 000011122222111100 0 00011112222
27749
27750
27751 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
27752 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
27753 +.+++.++. ...+..++..+||++++++.++++... .+++
27754 T Consensus 270 ~~~~~~~~~-------------------------~~~~~~~~~~~yda~~~~~~a~~~~~~---------------~~~~ 309 (385)
27755 T 1QO0_B 270 QACHGFFPE-------------------------NATITAWAEAAYWQTLLLGRAAQAAGN---------------WRVE 309 (385)
27756 T ss_dssp HHHHTTSCT-------------------------TCCCCHHHHHHHHHHHHHHHHHHHHTS---------------CCHH
27757 T ss_pred HHHHHhCCC-------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCC---------------CCHH
27758 Confidence 222221110 011234677899999999999987642 1345
27759
27760
27761 Q NP_000836.2 441 ELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTN 493 (908)
27762 Q Consensus 441 ~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~ 493 (908)
27763 .+.+.|++..|.|.+| ++.|+++|++. ..+.+.+++. ++.++.++.++.
27764 T Consensus 310 ~l~~~l~~~~~~g~~g-~~~f~~~~~~~~~~~~i~~~~~---~g~~~~~~~~~~ 359 (385)
27765 T 1QO0_B 310 DVQRHLYDIDIDAPQG-PVRVERQNNHSRLSSRIAEIDA---RGVFQVRWQSPE 359 (385)
27766 T ss_dssp HHHHTTTTCCEEETTE-EEEECTTTSBEEBCCEEEEECT---TSCEEEEEECSS
27767 T ss_pred HHHHHHhcCCcccCCc-eEEEeCCCCeeeeeeEEEEEcC---CCCEeEEEeCCC
27768 Confidence 6778888888999988 89999766653 4667777752 246777776654
27769
27770
27771 No 96
27772 >4KV7_A Probable leucine/isoleucine/valine-binding protein; structural genomics, PSI-Biology, Protein Structure; 1.2A {Rhodopirellula baltica}
27773 Probab=99.49 E-value=1.9e-18 Score=185.53 Aligned_cols=349 Identities=15% Similarity=0.149 Sum_probs=214.2 Template_Neff=11.900
27774
27775 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSL 117 (908)
27776 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
27777 ......++++||+++|.++... ..+.....+++.|++++|+.+++. |+++++.+.|+++++.. ..
27778 T Consensus 10 ~~~~~~~~~~Ig~~~~~~~~~~----------~~~~~~~~g~~~a~~~~n~~~~~~-g~~i~~~~~d~~~~~~~----~~ 74 (381)
27779 T 4KV7_A 10 ATPVDAQLLKFGMSTALSGPAA----------ELGINMRHGILAAFDEAKAKNHLP-SKTLKLIALDDGYEPAR----TA 74 (381)
27780 T ss_dssp CCCCCCEEEEEEEEECSSSTTH----------HHHHHHHHHHHHHHHHHHHTTSST-TEEEEEEEEECTTCHHH----HH
27781 T ss_pred CCCCCcceEEEEEEeCCCCccH----------HHHHHHHHHHHHHHHHHHHhCCCC-CceeEEEEEcCCCCHhh----HH
27782 Confidence 3455678999999999876421 256678899999999999876543 67888888887766433 33
27783
27784
27785 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
27786 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
27787 +.+++++. .++++++|++.++.....+...+...+||+|.+....+.+.....+++++++.+
27788 T Consensus 75 ~~~~~l~~------------------~~~~~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~ 136 (381)
27789 T 4KV7_A 75 PNMHRLTD------------------EHEVLAVVGNVGTPTAITAIPIAQQTKTPFFGAFTGASALRKTESVEFVINYRA 136 (381)
27790 T ss_dssp HHHHHHHT------------------TTCCSCEECCBCHHHHHHHHHHHHHTTCCEESCBCCCGGGCC---CTTEEBCSC
27791 T ss_pred HHHHHHHh------------------hCCeeEEEeCCCcHHHHHHHHHHHhhCCCEEeeecCchHhcCCCCCceEEECCc
27792 Confidence 33444332 147889999887776677778888999999998776554432224677888989
27793
27794
27795 Q NP_000836.2 198 PDSYQAQAMVDIVTA--LGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQ--KIPREPRPGEFEKIIKRLLE-T 272 (908)
27796 Q Consensus 198 ~~~~~~~~~~~~l~~--~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~--~~~~~~~~~~~~~~~~~l~~-~ 272 (908)
27797 +....+.++++++.+ .+|++|++++.++.++....+.+.+.+++..++++.... .+. .+..++...+++++. .
27798 T Consensus 137 ~~~~~~~~~~~~l~~~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~ 214 (381)
27799 T 4KV7_A 137 SYAEETAAMVDALVAKGIKPEEIGFFTQNDSYGDDGFFGGLAAIRRHQSVKVSSLPHGRYR--RNTSQVEDGLADLLMHQ 214 (381)
27800 T ss_dssp CHHHHHHHHHHHHHHTTCCGGGEEEEEESSHHHHHHHHHHHHHHHHHSCCCGGGSCEEEEC--TTCCCCHHHHHHHHTCS
27801 T ss_pred CHHHHHHHHHHHHHHCCCCccEEEEEEeCCcchHhhHHHHHHHHHHcCCCcceecCCCCCC--CCCccHHHHHHHHHhcC
27802 Confidence 888888889988854 578999999976667777777888777652134443211 111 112344555666541 2
27803
27804
27805 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLAN 352 (908)
27806 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (908)
27807 .++|+|++...+..+..+++++++.|+. ..|++.+.+...... ........+.+....... . ...
27808 T Consensus 215 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~----~~~ 279 (381)
27809 T 4KV7_A 215 PLPKAVIMVGTYEPCSKLIRMARMNNFN--PQFLAVSFVGADALQ-RSLGDLANGIVATQVVPH--------F----DSD 279 (381)
27810 T ss_dssp SCCSEEEEESCHHHHHHHHHHHHHTTCC--CEEEECGGGCHHHHH-HHHGGGGTTCEEEESSCC--------T----TCC
27811 T ss_pred CCCCEEEEECChHHHHHHHHHHHhCCCC--CcEEEEeccCHHHHH-HHHHHhcccEEEEEeeCC--------C----CCC
27812 Confidence 4688887776666677888888887764 345554433221110 000111222221110000 0 000
27813
27814
27815 Q NP_000836.2 353 NRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCP 432 (908)
27816 Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~ 432 (908)
27817 .+....|.+.+++.+.. .....++..+|||++++++++++....
27818 T Consensus 280 ~~~~~~f~~~~~~~~~~--------------------------~~~~~~~~~~yda~~~~~~al~~~~~~---------- 323 (381)
27819 T 4KV7_A 280 LPLVREYRDAMRDYDPE--------------------------LPLSFVSLEGYIVGRILVKAVTSIKGE---------- 323 (381)
27820 T ss_dssp SHHHHHHHHHHHHHCTT--------------------------SCCCHHHHHHHHHHHHHHHHHHHCCSC----------
27821 T ss_pred CHHHHHHHHHHHHhCCC--------------------------CCCChhhHHHHHHHHHHHHHHHhcCCC----------
27822 Confidence 01111222222211110 112345778999999999999876421
27823
27824
27825 Q NP_000836.2 433 RMSTIDGKELLGYIRAV-NFN-GSAGTPVTFNENGDAP-GRYDIFQYQ 477 (908)
27826 Q Consensus 433 ~~~~~~~~~l~~~l~~~-~f~-G~~G~~v~Fd~~G~~~-~~~~i~~~~ 477 (908)
27827 .+++.+.+.|++. .|. |.+| ++.|+++|++. ..+.+++++
27828 T Consensus 324 ----~~~~~l~~~l~~~~~~~~g~~g-~i~f~~~~~~~~~~~~i~~~~ 366 (381)
27829 T 4KV7_A 324 ----ISRSSIAAALEQLGQFDIGLGA-PLTLGPNDHQASSKVWPVLIG 366 (381)
27830 T ss_dssp ----CCHHHHHHHHHHTEEECSSSSS-CEEEBTTBCBCCCCCEEEEEC
27831 T ss_pred ----CCHHHHHHHHHHcCCCcCCCCC-CcccCCCCCcccccEEEEEEc
27832 Confidence 2345677788766 787 7777 89999876543 456666665
27833
27834
27835 No 97
27836 >4OBB_B Amino acid/amide ABC transporter substrate-binding; STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER; HET: 1QQ, MSE; 1.526A {Anabaena variabilis}
27837 Probab=99.49 E-value=2e-18 Score=186.37 Aligned_cols=362 Identities=16% Similarity=0.184 Sum_probs=213.9 Template_Neff=11.900
27838
27839 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
27840 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
27841 .....++++||+++|.++... ..+.....+++.|++++|+.+++ .|+++++.+.|+.+++.. ..+
27842 T Consensus 27 ~~~~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~n~~~~~-~g~~i~~~~~d~~~~~~~----~~~ 91 (395)
27843 T 4OBB_B 27 TTSDKNTIPIGIALAQTSNVA----------LLGQEQVAGAKIAEKYFNDKGGV-NGTPIKLIFQDTAGDEAG----TIN 91 (395)
27844 T ss_dssp -----CCEEEEECCCCSSTTH----------HHHHHHHHHHHHHHHHHHHTTTB-TTBCEEEEECCCTTSHHH----HHH
27845 T ss_pred CCccCCcEEEEEEECCCCCcH----------HHHHHHHHHHHHHHHHHHHcCCC-CCeeeEEEEEcCCCCHHH----HHH
27846 Confidence 345678999999999875321 24567889999999999987654 367788887776655332 233
27847
27848
27849 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
27850 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
27851 .+++++.+ .+++++|++.++.....+...+...+||+|.+....+.+.. .+++++++.++
27852 T Consensus 92 ~~~~l~~~------------------~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~ 151 (395)
27853 T 4OBB_B 92 AFQTLINK------------------DKVVGIVGPTLSQQAFSANPIAERAKVPVVGPSNTAKGIPE--IGDYVARVSAP 151 (395)
27854 T ss_dssp HHHCCCCC------------------SCCSCEECCSCHHHHHHHHHHHHHHTCCEEESSCCSTTSGG--GCTTEEESSCC
27855 T ss_pred HHHHHHhc------------------CCccEEECCCChhHHHHHHHHHHHhCCCEEcCCcCCCcCCC--CCCeEEEecCC
27856 Confidence 33433321 46788888876665566677788899999998765543321 24677888888
27857
27858
27859 Q NP_000836.2 199 DSYQAQAMVDIVT--ALGWNYVSTLA-SEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNA 275 (908)
27860 Q Consensus 199 ~~~~~~~~~~~l~--~~~~~~v~ii~-~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (908)
27861 +...+..+++.+. ..+|+++++++ .++.++..+.+.|++.+++. ++++.....+. ....+....+++++. .++
27862 T Consensus 152 ~~~~~~~~~~~l~~~~~~~~~i~ii~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~ 227 (395)
27863 T 4OBB_B 152 VSVVAPNSVKAALKQNPNIKKVAVFFAQNDAFSKSETEIFQQTVKDQ-GLELVTVQKFQ--TTDTDFQSQATNAIN-LKP 227 (395)
27864 T ss_dssp HHHHTHHHHHHHHHHCTTCCEEEEEEETTCHHHHHHHHHHHHHHHHH-TCEEEEEEEEC--TTCCCCHHHHHHHHT-TCC
27865 T ss_pred hHHhchHHHHHHHHhCCCCCEEEEEEecCChHhHHHHHHHHHHHHHC-CCeEEEEEEeC--CCCCCHHHHHHHHHh-hCC
27866 Confidence 8777777776543 56899999998 45556777788888887765 35544322222 122344555666653 478
27867
27868
27869 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRR 355 (908)
27870 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (908)
27871 ++|++...+..+..+++++++.|+. ..|++.+.+...... ........+.+...... . ....+.
27872 T Consensus 228 ~~i~~~~~~~~~~~~~~~~~~~g~~--~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~---~~~~~~ 291 (395)
27873 T 4OBB_B 228 DLVIISGLAADGGNLVRQLRELGYQ--GAIIGGNGLNTSNVF-AVCKALCDGVLIAQAYS----------P---EYTGEI 291 (395)
27874 T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCC--SEEEECGGGCSGGGH-HHHGGGGTTCEEEESCC----------T---TCCCHH
27875 T ss_pred CEEEEECChhhHHHHHHHHHHcCCC--ceEEecCccCCHHHH-HHhHHHhCCeEEeecCC----------c---ccCCHH
27876 Confidence 8887776566677888888888774 356655433221100 00011122222111100 0 000011
27877
27878
27879 Q NP_000836.2 356 NVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMS 435 (908)
27880 Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~ 435 (908)
27881 ...|.+.+.+.++ ..+..++..+|||++++++++++....... .+. ..
27882 T Consensus 292 ~~~f~~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~~~~~----~~~-~~ 339 (395)
27883 T 4OBB_B 292 NKAFRQAYVDQYK---------------------------KEPPQFSAQAFAAVQVYVESLKALDTKNKV----SKI-QL 339 (395)
27884 T ss_dssp HHHHHHHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHHHHHSCG----GGS-CH
27885 T ss_pred HHHHHHHHHHHHC---------------------------CCCChHHHHHHHHHHHHHHHHHHccccCCC----ccc-cH
27886 Confidence 1122222222111 112356788999999999999887642100 000 00
27887
27888
27889 Q NP_000836.2 436 TIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWT 492 (908)
27890 Q Consensus 436 ~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~ 492 (908)
27891 ....+.+.+.+++..|.|.+| ++.||++|++. ..+.+++++. ..+..+|.|.
27892 T Consensus 340 ~~~~~~l~~~l~~~~~~g~~G-~i~f~~~g~~~~~~~~i~~~~~----~~~~~~~~~~ 392 (395)
27893 T 4OBB_B 340 PELRTELNKQLLTGKYNTPLG-EISFTPIGEVVQKDFYVAQIKM----EKDGSQGKFT 392 (395)
27894 T ss_dssp HHHHHHHHHHHHHCEEEETTE-EEEECTTSCEECCCCEEEEEEE----CTTSSCEEEE
27895 T ss_pred HHHHHHHHHHHhhCCCcCCcE-EEEECCCCCccCccEEEEEEEc----cccCCcceEE
27896 Confidence 011223444455568999988 89999988875 6788888763 2344556554
27897
27898
27899 No 98
27900 >4RV5_B Amino acid/amide ABC transporter substrate-binding; Structural Genomics, PSI-Biology, Protein Structure; HET: PYR, MSE, FMT; 1.04A {Anabaena variabilis ATCC 29413}
27901 Probab=99.49 E-value=2e-18 Score=186.37 Aligned_cols=362 Identities=16% Similarity=0.184 Sum_probs=213.9 Template_Neff=11.900
27902
27903 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
27904 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
27905 .....++++||+++|.++... ..+.....+++.|++++|+.+++ .|+++++.+.|+.+++.. ..+
27906 T Consensus 27 ~~~~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~n~~~~~-~g~~i~~~~~d~~~~~~~----~~~ 91 (395)
27907 T 4RV5_B 27 TTSDKNTIPIGIALAQTSNVA----------LLGQEQVAGAKIAEKYFNDKGGV-NGTPIKLIFQDTAGDEAG----TIN 91 (395)
27908 T ss_dssp -----CCEEEEECCCCSSTTH----------HHHHHHHHHHHHHHHHHHHTTTB-TTBCEEEEECCCTTSHHH----HHH
27909 T ss_pred CCccCCcEEEEEEECCCCCcH----------HHHHHHHHHHHHHHHHHHHcCCC-CCeeeEEEEEcCCCCHHH----HHH
27910 Confidence 345678999999999875321 24567889999999999987654 367788887776655332 233
27911
27912
27913 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
27914 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
27915 .+++++.+ .+++++|++.++.....+...+...+||+|.+....+.+.. .+++++++.++
27916 T Consensus 92 ~~~~l~~~------------------~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~ 151 (395)
27917 T 4RV5_B 92 AFQTLINK------------------DKVVGIVGPTLSQQAFSANPIAERAKVPVVGPSNTAKGIPE--IGDYVARVSAP 151 (395)
27918 T ss_dssp HHHHHHHT------------------SCCSCEECCSCHHHHHHHHHHHHHHTCCEEESSCCSTTSGG--GCTTEEESSCC
27919 T ss_pred HHHHHHhc------------------CCccEEECCCChhHHHHHHHHHHHhCCCEEcCCcCCCcCCC--CCCeEEEecCC
27920 Confidence 33433321 46788888876665566677788899999998765543321 24677888888
27921
27922
27923 Q NP_000836.2 199 DSYQAQAMVDIVT--ALGWNYVSTLA-SEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNA 275 (908)
27924 Q Consensus 199 ~~~~~~~~~~~l~--~~~~~~v~ii~-~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (908)
27925 +...+..+++.+. ..+|+++++++ .++.++..+.+.|++.+++. ++++.....+. ....+....+++++. .++
27926 T Consensus 152 ~~~~~~~~~~~l~~~~~~~~~i~ii~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~ 227 (395)
27927 T 4RV5_B 152 VSVVAPNSVKAALKQNPNIKKVAVFFAQNDAFSKSETEIFQQTVKDQ-GLELVTVQKFQ--TTDTDFQSQATNAIN-LKP 227 (395)
27928 T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEEETTCHHHHHHHHHHHHHHHHT-TCEEEEEEEEC--TTCCCCHHHHHHHHT-TCC
27929 T ss_pred hHHhchHHHHHHHHhCCCCCEEEEEEecCChHhHHHHHHHHHHHHHC-CCeEEEEEEeC--CCCCCHHHHHHHHHh-hCC
27930 Confidence 8777777776543 56899999998 45556777788888887765 35544322222 122344555666653 478
27931
27932
27933 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRR 355 (908)
27934 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (908)
27935 ++|++...+..+..+++++++.|+. ..|++.+.+...... ........+.+...... . ....+.
27936 T Consensus 228 ~~i~~~~~~~~~~~~~~~~~~~g~~--~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~---~~~~~~ 291 (395)
27937 T 4RV5_B 228 DLVIISGLAADGGNLVRQLRELGYQ--GAIIGGNGLNTSNVF-AVCKALCDGVLIAQAYS----------P---EYTGEI 291 (395)
27938 T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCC--SEEEECGGGCSGGGH-HHHGGGGTTCEEEESCC----------T---TCCCHH
27939 T ss_pred CEEEEECChhhHHHHHHHHHHcCCC--ceEEecCccCCHHHH-HHhHHHhCCeEEeecCC----------c---ccCCHH
27940 Confidence 8887776566677888888888774 356655433221100 00011122222111100 0 000011
27941
27942
27943 Q NP_000836.2 356 NVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMS 435 (908)
27944 Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~ 435 (908)
27945 ...|.+.+.+.++ ..+..++..+|||++++++++++....... .+. ..
27946 T Consensus 292 ~~~f~~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~~~~~----~~~-~~ 339 (395)
27947 T 4RV5_B 292 NKAFRQAYVDQYK---------------------------KEPPQFSAQAFAAVQVYVESLKALDTKNKV----SKI-QL 339 (395)
27948 T ss_dssp HHHHHHHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHHHHHSCG----GGS-CH
27949 T ss_pred HHHHHHHHHHHHC---------------------------CCCChHHHHHHHHHHHHHHHHHHccccCCC----ccc-cH
27950 Confidence 1122222222111 112356788999999999999887642100 000 00
27951
27952
27953 Q NP_000836.2 436 TIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWT 492 (908)
27954 Q Consensus 436 ~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~ 492 (908)
27955 ....+.+.+.+++..|.|.+| ++.||++|++. ..+.+++++. ..+..+|.|.
27956 T Consensus 340 ~~~~~~l~~~l~~~~~~g~~G-~i~f~~~g~~~~~~~~i~~~~~----~~~~~~~~~~ 392 (395)
27957 T 4RV5_B 340 PELRTELNKQLLTGKYNTPLG-EISFTPIGEVVQKDFYVAQIKM----EKDGSQGKFT 392 (395)
27958 T ss_dssp HHHHHHHHHHHHHCEEEETTE-EEEECTTSCEECCCCEEEEEEE----CTTSSCEEEE
27959 T ss_pred HHHHHHHHHHHhhCCCcCCcE-EEEECCCCCccCccEEEEEEEc----cccCCcceEE
27960 Confidence 011223444455568999988 89999988875 6788888763 2344556554
27961
27962
27963 No 99
27964 >3I45_A Twin-arginine translocation pathway signal protein; STRUCTURAL GENOMICS, CRYSTAL STRUCTURE,PROTEIN STRUCTURE; 1.36A {Rhodospirillum rubrum}
27965 Probab=99.49 E-value=2.3e-18 Score=185.44 Aligned_cols=355 Identities=15% Similarity=0.137 Sum_probs=214.7 Template_Neff=11.600
27966
27967 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
27968 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
27969 +++++||+++|.++.. ..+.....|++.|++++|+.+++++|+++++...|+.+++.. ..+.+++
27970 T Consensus 3 ~~~~~Ig~i~~~~~~~-----------~~~~~~~~g~~~a~~~~n~~~g~~~g~~v~~~~~d~~~~~~~----~~~~~~~ 67 (387)
27971 T 3I45_A 3 LEAIRIGEINSYSQIP-----------AFTLPYRNGWQLAVEQINAAGGLLGGRPLEVISRDDGGDPGK----AVTAAQE 67 (387)
27972 T ss_dssp CCCEEEEEEECTTTCH-----------HHHHHHHHHHHHHHHHHHHTTCBTTTBCEEEEEEECTTCHHH----HHHHHHH
27973 T ss_pred CCcEEEEEecCCCCCc-----------ccCHHHHHHHHHHHHHHHHCCCccCCceeEEEEecCCCCHHH----HHHHHHH
27974 Confidence 4689999999987532 245678899999999999987776678888888877655332 2333444
27975
27976
27977 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
27978 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
27979 ++. .++++++|++.++.....+...+...++|+|.+....+.+.+...+++++++.+++...
27980 T Consensus 68 l~~------------------~~~v~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (387)
27981 T 3I45_A 68 LLT------------------RHGVHALAGTFLSHVGLAVSDFARQRKVLFMASEPLTDALTWEKGNRYTYRLRPSTYMQ 129 (387)
27982 T ss_dssp HHH------------------HHCCSEEEECCSHHHHHHHHHHHHHHTCCEEECSCCCGGGTTTTCCTTEEECSCCHHHH
27983 T ss_pred HHH------------------HhCCCEEEEcCChHHHHHHHHHHHHcCCEEEEcCCCChhHhhcCCCCcEEEeCCCHHHH
27984 Confidence 332 14789999987776666667778888999998776554433222357788999988888
27985
27986
27987 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQ-KIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
27988 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
27989 +..+++++.+.+|+++++++.++.++..+.+.+++.+++. +..+.... .+.. ....+....+++++. .++|++++.
27990 T Consensus 130 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~ii~~ 206 (387)
27991 T 3I45_A 130 AAMLAAEAAKLPITRWATIAPNYEYGQSAVARFKELLLAA-RPEVTFVAEQWPA-LYKLDAGPTVQALQQ-AEPEGLFNV 206 (387)
27992 T ss_dssp HHHHHHHHTTSSCCEEEEECCSSHHHHHHHHHHHHHHHHH-CTTCEEEEEECCC-TTCCCHHHHHHHHHH-TCCSEEEEC
27993 T ss_pred HHHHHHHHhcCCCCEEEEEccCcHHhHHHHHHHHHHHHHh-CCCcEEEeeeccc-ccCCCcHHHHHHHHh-cCCCeEEEE
27994 Confidence 8899999888899999999976667777888888877764 22221111 1110 112344555666653 478888777
27995
27996
27997 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQE-EIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
27998 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
27999 ..+..+..+++++++.|+.....++ .......... .... ....+.+..... +. ....+....|.
28000 T Consensus 207 ~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~~---~~~~~~~~~f~ 271 (387)
28001 T 3I45_A 207 LFGADLPKFVREGRVRGLFAGRQVV-SMLTGEPEYL-NPLKDEAPEGWIVTGYP----------WY---DIDTAPHRAFV 271 (387)
28002 T ss_dssp CCTTHHHHHHHHHHHHTSSTTCEEE-EEEEESHHHH-GGGGGGCCSSCEEEECC----------GG---GCCCHHHHHHH
28003 T ss_pred cccccHHHHHHHHHHcCccCCCeEE-EEecCCHHHH-HhhcCCCCCCeEEecCC----------cc---cCCCHHHHHHH
28004 Confidence 5566677888888888775311111 1111111000 0000 111222111000 00 00011111222
28005
28006
28007 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
28008 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
28009 +.+.+.+. ..+..++..+||++++++.|++++.. .+++
28010 T Consensus 272 ~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~a~~~~~~---------------~~~~ 309 (387)
28011 T 3I45_A 272 EAYRARWK---------------------------EDPFVGSLVGYNTLTAMAVAFEKAGG---------------TESE 309 (387)
28012 T ss_dssp HHHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHHTS---------------CCHH
28013 T ss_pred HHHHHHHC---------------------------CCCChHHHHHHHHHHHHHHHHHHhCC---------------CCHH
28014 Confidence 22222111 11234567899999999999988642 1345
28015
28016
28017 Q NP_000836.2 441 ELLGYIRAVNFNGSAGTPVTFNE-NGDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
28018 Q Consensus 441 ~l~~~l~~~~f~G~~G~~v~Fd~-~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
28019 .+.++|++..|.|.+| ++.|++ +++....+.+.+++..+ +.+ .++.|...
28020 T Consensus 310 ~i~~~l~~~~~~g~~G-~i~f~~~~~~~~~~~~i~~~~~~~--g~~-~~~~w~~~ 360 (387)
28021 T 3I45_A 310 TLVETLKDMAFSTPMG-PLSFRASDHQSTMGAWVGRTALRD--GKG-VMVDWRYV 360 (387)
28022 T ss_dssp HHHHHTTTCEEEETTE-EEEBCTTTCBBCCCEEEEEEEEET--TEE-EEEEEEEE
28023 T ss_pred HHHHHHhhCcccCCCe-eEEEcCCCCcccccEEEEEEEeeC--Cce-eEeeeEEE
28024 Confidence 6778888778999988 899987 34444566776665321 233 34466543
28025
28026
28027 No 100
28028 >4F06_A Extracellular ligand-binding receptor; PSI-BIOLOGY, MCSG, MIDWEST CENTER FOR; HET: PHB, SO4, GOL; 1.3A {Rhodopseudomonas palustris}
28029 Probab=99.48 E-value=2.9e-18 Score=183.24 Aligned_cols=356 Identities=12% Similarity=0.097 Sum_probs=217.6 Template_Neff=12.000
28030
28031 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCS-RDTYALEQSLTFV 120 (908)
28032 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~-~~~~a~~~~~~~~ 120 (908)
28033 ..++++||++.|.++... ..+.....|++.|++++|. + ..|+++++.+.|+.+ ++.. ..+.+
28034 T Consensus 2 ~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~~~--~-~~g~~~~~~~~d~~~~~~~~----~~~~~ 64 (371)
28035 T 4F06_A 2 NADTIKVGVIGTMSGPYA----------LFGKNYKMGIDAWVAEHGN--K-VAGHTVEFVYRDEVSPNPAQ----SKALA 64 (371)
28036 T ss_dssp --CEEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHHCS--E-ETTEEEEEEEEECCSSCHHH----HHHHH
28037 T ss_pred cCCceEEEEEEcCCCChh----------HhHHHHHHHHHHHHHHcCC--c-cCCEEEEEEEecCCCCCHHH----HHHHH
28038 Confidence 356899999999875421 2556788899999999883 1 246778888877664 4332 22333
28039
28040
28041 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
28042 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
28043 ++++. .++++++|++.++.....+...+...++|+|.+....+.+.. ..++++++.++..
28044 T Consensus 65 ~~l~~------------------~~~~~~vi~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~--~~~~~~~~~~~~~ 124 (371)
28045 T 4F06_A 65 QELIV------------------KEKVQYLAGLYFTPNAMAVAPLLQEAKVPMVVMNAATSSITE--KSPYIVRTSFTMF 124 (371)
28046 T ss_dssp HHHHH------------------TSCCSEEEECCSHHHHHHHGGGHHHHTCCEEESSCCCGGGGG--GCTTEEESSCCHH
28047 T ss_pred HHHHH------------------hcCCCEEEeCCCCHHHHHHHHHHHHcCCCEEEecCCCchhcc--CCCCEEEecCchh
28048 Confidence 44332 157899999776666666677788899999998765543322 2567888888888
28049
28050
28051 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
28052 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
28053 ..+..+++++.+.+|++|++++.++.++..+.+.+.+.+++. ++++.....+. ....+....+++++. .++|++++
28054 T Consensus 125 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~i~~ 200 (371)
28055 T 4F06_A 125 QNTVPAAKVAKQKGATKVAIAVSDYGPGIDAETAFKKTFEAE-GGKVVEAVRMP--LSTTDFGPIMQRIKN-SGADMIFT 200 (371)
28056 T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEEC--TTCCCCHHHHHHHHH-HTCSEEEE
28057 T ss_pred hcHHHHHHHHHHhCCCEEEEEEeCCcccHHHHHHHHHHHHHC-CCEEcEEEEcC--CCCCChHHHHHHHHH-cCCCEEEE
28058 Confidence 888888888888899999999966667777788888887765 35544322222 122344556666653 47888877
28059
28060
28061 Q NP_000836.2 281 FA-NEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVW 358 (908)
28062 Q Consensus 281 ~~-~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (908)
28063 .+ ++..+..+++++++.|+.. ++.|++.+.+...... ........+.+..... .. ....+....
28064 T Consensus 201 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~---~~~~~~~~~ 266 (371)
28065 T 4F06_A 201 FLPAGPPTLGFVKAYIDNGLKAGGVKLMSTGDVVTEPDL-PNIGEAGLGILSTYHY----------AV---SHDSPENKA 266 (371)
28066 T ss_dssp ECCTTHHHHHHHHHHHHTTTTTTTCEEEEEGGGGCGGGH-HHHCGGGTTCEEEESC----------CT---TCCSHHHHH
28067 T ss_pred eCCCChhHHHHHHHHHHCCcccCCceEEEeCCCCCCcch-hhhhhhcceeEEEecc----------cc---cCCCHHHHH
28068 Confidence 65 4556778888988888753 3566665433221110 0011111222211100 00 000111122
28069
28070
28071 Q NP_000836.2 359 FAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTID 438 (908)
28072 Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~ 438 (908)
28073 |.+.+++.+.. ...+..++..+||++++++++++++... .+
28074 T Consensus 267 f~~~~~~~~~~-------------------------~~~~~~~~~~~yda~~~~~~al~~~~~~--------------~~ 307 (371)
28075 T 4F06_A 267 FLALLQKGGAK-------------------------LDEVTMTSVAAYDGARLIYKMIEATSGK--------------SD 307 (371)
28076 T ss_dssp HHHHHHHTTCC-------------------------GGGCCHHHHHHHHHHHHHHHHHHHTTTS--------------CC
28077 T ss_pred HHHHHHHcCCC-------------------------CCCCChHHHHHHHHHHHHHHHHHHcCCC--------------CC
28078 Confidence 33323221100 0012346778999999999999876421 23
28079
28080
28081 Q NP_000836.2 439 GKELLGYIRAVNFNGSAGTPVTFNEN-GDAPGRYDIFQYQITNKSTEYKVIGHWT 492 (908)
28082 Q Consensus 439 ~~~l~~~l~~~~f~G~~G~~v~Fd~~-G~~~~~~~i~~~~~~~~~~~~~~Vg~~~ 492 (908)
28083 ++.+.+.|++.+|.|.+| ++.|+++ +++...+.+.+++..++...++.++.|.
28084 T Consensus 308 ~~~l~~~l~~~~~~g~~g-~~~f~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 361 (371)
28085 T 4F06_A 308 PDKAIAAVKGMKWVSPRG-EVSIDPETRHITQNVYLREVEKVDGKLINRELETFK 361 (371)
28086 T ss_dssp HHHHHHHHTTCEEEETTE-EEEECTTTCBEEEEEEEEEEEEETTEEEEEEEEEEE
28087 T ss_pred HHHHHHHHcCCCeecCCe-eEEEcccCCceeeeEEEEEEEeeCCEEEeeeeeecc
28088 Confidence 456778888888999888 8999974 4445677787776321123455555553
28089
28090
28091 No 101
28092 >4N03_A ABC-type branched-chain amino acid transport; structural genomics, fatty acid, PSI-Biology; HET: PLM; 1.15A {Thermomonospora curvata}
28093 Probab=99.46 E-value=4.8e-18 Score=184.10 Aligned_cols=356 Identities=14% Similarity=0.094 Sum_probs=221.3 Template_Neff=11.800
28094
28095 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
28096 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
28097 ....++++||++.|.++... ..+.....+++.|++++|+.+++ .|+++++.+.|+.+++.. ..+.
28098 T Consensus 28 ~~~~~~i~Ig~i~~~~~~~~----------~~~~~~~~~~~~a~~~~n~~g~~-~g~~i~~~~~d~~~~~~~----~~~~ 92 (405)
28099 T 4N03_A 28 GVTDKTIKLGIATDLTGVYA----------PLGKSITQAQQLYYEEVNQRGGV-CGRTIEAVVRDHGYDPQK----AVSI 92 (405)
28100 T ss_dssp TBCSSEEEEEEEECSSSTTH----------HHHHHHHHHHHHHHHHHHHTTCB-TTBEEEEEEEECTTCHHH----HHHH
28101 T ss_pred CcCCCeEEEEEEeCCCCCCc----------chhHHHHHHHHHHHHHHHHcCCc-CCEeEEEEEEeCCCCHHH----HHHH
28102 Confidence 45678999999999875321 24567889999999999987654 367888888887655332 2233
28103
28104
28105 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
28106 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
28107 +++++ ++++++|++.++.....+...+...++|+|....... .. ..++++++.+++
28108 T Consensus 93 ~~~l~--------------------~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~-~~---~~~~~~~~~~~~ 148 (405)
28109 T 4N03_A 93 YTELN--------------------NNVLAIPHFLGSPMVSAVKQRIESDKMFTIPSAWTTA-LL---GSKYIQVTGTTY 148 (405)
28110 T ss_dssp HHHHT--------------------TTCSCEEEEECHHHHHHHHHHHHHHTCCEEEECCCGG-GC---SCTTBCCCSCCH
28111 T ss_pred HHHHH--------------------hhccEEeeccCChhHHHHHHHHHhcCCceecccccHH-Hc---CCCccccCCCCH
28112 Confidence 33322 2678888877666666666777888999986543322 11 246778888888
28113
28114
28115 Q NP_000836.2 200 SYQAQAMVDIVTAL----GWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNA 275 (908)
28116 Q Consensus 200 ~~~~~~~~~~l~~~----~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (908)
28117 ...+..+++++.+. +|++|++++.++.++..+.+.|++.+++. ++++.. ..+. ....++...+++++. .++
28118 T Consensus 149 ~~~~~~~~~~l~~~~~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~-~~~~--~~~~~~~~~~~~~~~-~~~ 223 (405)
28119 T 4N03_A 149 DVDMINGVQWLMDKKLIKKGDKLGHVYFEGDYGGSALRGTKYAAEQL-GLEVFE-LPIK--PTDRDMKSQVAALAK-EKV 223 (405)
28120 T ss_dssp HHHHHHHHHHHHHTTSSCTTCEEEEEEETTHHHHHHHHHHHHHHHHH-TCEEEE-EEEC--TTCCCCHHHHHHHHH-TTC
28121 T ss_pred HHHHHHHHHHHHHccccCCCCEEEEEEecCcchhhHHHHHHHHHHHh-CCEEEE-eeeC--CCCCCHHHHHHHHHH-CCC
28122 Confidence 88888888887543 89999999976667777788888888765 355432 2221 122345566677763 578
28123
28124
28125 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQE--EIAEGAVTILPKRASIDGFDRYFRSRTLANN 353 (908)
28126 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (908)
28127 |+|++...+..+..+++++++.|+. ..|++.+.+...... .... ....+.+....... . ....
28128 T Consensus 224 ~~vv~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~---------~---~~~~ 288 (405)
28129 T 4N03_A 224 DAILLSAGPQQAASLAGIARSQGMK--QPILGSNSAYSPQLL-ATPAKPALVEGFFIATAGAP---------M---SADL 288 (405)
28130 T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCC--CCEEECTTSCCGGGG-GSTTHHHHSSSEEEEESSCC---------T---TSSC
28131 T ss_pred CEEEEecCHHHHHHHHHHHHHcCCC--CCEEEecccCCHHHh-cCCCchhhcCCEEEEecCCC---------C---CCCC
28132 Confidence 8887776666677888888887773 456665533221110 0000 11222221111000 0 0001
28133
28134
28135 Q NP_000836.2 354 RRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPR 433 (908)
28136 Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~ 433 (908)
28137 +....|.+.+++.+.. .....++..+||++++++++++++....
28138 T Consensus 289 ~~~~~f~~~~~~~~~~--------------------------~~~~~~~~~~yda~~~~~~al~~~~~~~---------- 332 (405)
28139 T 4N03_A 289 PAIKKLAEAYSKKYPK--------------------------DPLDSGVVNGYGGASIVVSALEKACANK---------- 332 (405)
28140 T ss_dssp HHHHHHHHHHHHHCTT--------------------------SCCCHHHHHHHHHHHHHHHHHHHHHHTT----------
28141 T ss_pred HHHHHHHHHHHHHCCC--------------------------CCCChHHHHHHHHHHHHHHHHHHHHHCC----------
28142 Confidence 1112222222222110 0113457789999999999999875311
28143
28144
28145 Q NP_000836.2 434 MSTIDGKELLGYIRAV-NF-NGSAGTPVTFNENGDA-PGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
28146 Q Consensus 434 ~~~~~~~~l~~~l~~~-~f-~G~~G~~v~Fd~~G~~-~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
28147 ..+++.+.+.|++. .| .|.+| ++.|+.+|++ ...+.|++++..+ ...++.||.|...
28148 T Consensus 333 --~~~~~~l~~~l~~~~~~~~g~~g-~i~f~~~g~~~~~~~~i~~~~~~~-~~~~~~v~~~~~~ 392 (405)
28149 T 4N03_A 333 --DLTREGLINAHRSEANADDGLGT-PMNFTYFDKPATRKTYIIKPDEKA-TGGAVIVEQAFES 392 (405)
28150 T ss_dssp --EESHHHHHHHHTTCSCBCCSSSC-CBCCSCCSSCSCCCEEEEEECTTS-GGGEEEEEEEECC
28151 T ss_pred --CCCHHHHHHHHhcccCCCCCCCC-ccccccCCCCCcccEEEEEeCCCC-CCceEEEeeeecc
28152 Confidence 12455677788765 57 68888 8999988876 4578888886432 3468899999765
28153
28154
28155 No 102
28156 >4M88_A Extracellular ligand-binding receptor; STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER; HET: GOL; 1.762A {Verminephrobacter eiseniae}
28157 Probab=99.46 E-value=4.9e-18 Score=180.42 Aligned_cols=343 Identities=14% Similarity=0.064 Sum_probs=212.0 Template_Neff=12.000
28158
28159 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
28160 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
28161 +++++||++.|.++... ..+.....|++.|++++|+.+++. |+++++.+.|+.+++.. ..+.+++
28162 T Consensus 2 ~~~i~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~n~~g~~~-g~~i~~~~~d~~~~~~~----~~~~~~~ 66 (357)
28163 T 4M88_A 2 NAQIVLGQIGPFTGPLA----------ADAAGLNQGIKAYLAQANKAGGIR-GQKLTLFEADDRFSGEG----FAEQFPK 66 (357)
28164 T ss_dssp -CEEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHHHHTTCBT-TBEEEEEEEECTTSHHH----HHHHHHH
28165 T ss_pred CCeEEEeEEecCCCCCh----------HHhHHHHHHHHHHHHHHHHcCCCC-CEEeEEEEEcCCCCHHH----HHHHHHH
28166 Confidence 46789999999876421 245678899999999999876654 77888888887665432 3333443
28167
28168
28169 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVAN--ILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
28170 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~--~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
28171 ++. ++++++|++.++.....+.. .+...++|+|++....+.+.. ..+++++++.++..
28172 T Consensus 67 ~~~-------------------~~v~~iig~~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~-~~~~~~~~~~~~~~ 126 (357)
28173 T 4M88_A 67 AME-------------------KKPLALISPMGSAAIKRMLDDKLLDTAPVVVVNGVPGAESLRT-PGHPKFFHVRAGDK 126 (357)
28174 T ss_dssp HHT-------------------TCCSEEECCBCHHHHHHHHHTTTTSSCSCEEECCBSCCHHHHS-SCCTTEEBCSCCHH
28175 T ss_pred HHh-------------------hCCCEEEeCCCcHHHHHHcchhHHhcCCcEEEECCCCchhhcC-CCCCCeEEccCCcH
28176 Confidence 332 47889998877666555555 678889999988765544332 23577899999998
28177
28178
28179 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISRE-IGGVCIAQ-SQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
28180 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~-~~~i~v~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
28181 ..++.+++++.+.+|+++++++.++.++..+.+.|++.+++ . ++.+.. ...+. .+..+....+++++. .++|+|
28182 T Consensus 127 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~i 202 (357)
28183 T 4M88_A 127 QEIEEIVSHAQMLGMSKLATLYQDLPTGTSGMAVVQEAVKTVP-GGKIELNGVKSG--PDAAALAAAARQIAA-LGAQGV 202 (357)
28184 T ss_dssp HHHHHHHHHHHHTTCSEEEEEEESSHHHHHHHHHHHHHHHTCT-TCCCEEEEEEEC--SSHHHHHHHHHHHHT-TTCSEE
28185 T ss_pred HHHHHHHHHHHHhCCCEEEEEEeCChhcHHHHHHHHHHHHcCC-CCceEEEEeecC--CCHHHHHHHHHHHHH-cCCCEE
28186 Confidence 88999999988889999999997667787888888888776 4 344431 11111 122345556666663 578888
28187
28188
28189 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQE-EIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNV 357 (908)
28190 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (908)
28191 ++...+..+..+++++++.|+. ..|++.+.+...... .... ....+.+....... .. ....+...
28192 T Consensus 203 i~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~ 268 (357)
28193 T 4M88_A 203 LVIGPPPFIVAGIAALRKADVT--QPLFVLSYVSAAQIV-KVVGVAGARGVGIVQAFPD--------PN---DKMLPVQR 268 (357)
28194 T ss_dssp EEESSHHHHHHHHHHHHHTTCC--SCEEECTTCCHHHHH-HHHHHHHHTTEEEEESSSC--------TT---CCSSHHHH
28195 T ss_pred EEECCHHHHHHHHHHHHhCCCC--CCEEEeecCCHHHHH-HHHcccCcceEEEEEEeCC--------cc---cCCCHHHH
28196 Confidence 7777666677888998888874 345554433221110 0000 11122221110000 00 00011122
28197
28198
28199 Q NP_000836.2 358 WFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTI 437 (908)
28200 Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~ 437 (908)
28201 .|.+.+++.++. ...+..++..+||+++++++|++++... ..
28202 T Consensus 269 ~f~~~~~~~~~~-------------------------~~~~~~~~~~~yda~~~~~~al~~~~~~-------------~~ 310 (357)
28203 T 4M88_A 269 EFQAAMKEAFPQ-------------------------MQEYTEFQLEGYLSARTVGEALKHPKNT-------------GL 310 (357)
28204 T ss_dssp HHHHHHHHHCTT-------------------------CCSCCHHHHHHHHHHHHHHHHHHSTTCC-------------CS
28205 T ss_pred HHHHHHHHHccc-------------------------cCCCChHHHHHHHHHHHHHHHHhccCCC-------------CC
28206 Confidence 233333322210 0112346788999999999999886421 12
28207
28208
28209 Q NP_000836.2 438 DGKELLGYIRAV-NFNGSAGTPVTFNENGDAPGRYDIFQYQ 477 (908)
28210 Q Consensus 438 ~~~~l~~~l~~~-~f~G~~G~~v~Fd~~G~~~~~~~i~~~~ 477 (908)
28211 +++.+.++|++. .|. .+|.++.|+++|++...+.+.++.
28212 T Consensus 311 ~~~~l~~~l~~~~~~~-~~G~~~~f~~~~~~~~~~~i~~~~ 350 (357)
28213 T 4M88_A 311 SAANLAATLSTMGEID-IGGFHLDFSKGNAGSRYVNIGVIG 350 (357)
28214 T ss_dssp SHHHHHHHHHHSCCEE-ETTEEECCSSSSBCCCCCEEEEEC
28215 T ss_pred CHHHHHHHHHcCCCcc-cCcEEeecCCCCCccCcEEEEEEc
28216 Confidence 455677778765 465 334268999877766677777774
28217
28218
28219 No 103
28220 >3I09_B Periplasmic branched-chain amino acid-binding protein; TYPE I PERIPLASMIC BINDING PROTEIN; HET: MSE, CIT, EDO, AAE; 1.8A {Burkholderia mallei}
28221 Probab=99.45 E-value=6.2e-18 Score=181.03 Aligned_cols=347 Identities=10% Similarity=0.101 Sum_probs=213.9 Template_Neff=11.800
28222
28223 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
28224 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
28225 .++++||+++|.++... ...+.....+++.|++++|. + +.|+++++.+.|+.+++. ...+.+++
28226 T Consensus 2 ~~~~~Ig~i~~~~~~~~---------~~~~~~~~~g~~~a~~~~~~--~-~~g~~i~~~~~d~~~~~~----~~~~~~~~ 65 (375)
28227 T 3I09_B 2 ADSVKIGFITDMSGLYA---------DIDGQGGLEAIKMAVADFGG--K-VNGKPIEVVYADHQNKAD----IAASKARE 65 (375)
28228 T ss_dssp CSSEEEEEEECSSSTTT---------TTSHHHHHHHHHHHHHHHTS--E-ETTEEEEEEEEECTTCHH----HHHHHHHH
28229 T ss_pred CCeeEEEEEeCCCCcch---------hhcchhHHHHHHHHHHHhCC--c-cCCEEEEEEEecCCCCHH----HHHHHHHH
28230 Confidence 46789999999875421 01356778899999999872 2 346778888888765533 22333444
28231
28232
28233 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
28234 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
28235 ++. .++++++|++.++.....+...+...++|+|.+....+.+.....+++++++.+++...
28236 T Consensus 66 l~~------------------~~~v~~vi~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (375)
28237 T 3I09_B 66 WMD------------------RGGLDLLVGGTNSATALSMNQVAAEKKKVYINIGAGADTLTNEQCTPYTVHYAYDTMAL 127 (375)
28238 T ss_dssp HHH------------------HSCEEEEEECSCHHHHHHHHHHHHHHTCEEEECSCCCGGGGTTTCCTTEEECSCCHHHH
28239 T ss_pred HHH------------------hCCCCEEEecCChHHHHHHHHHHHHcCCEEEEccCCccccCCCcCCCceeEecCCHhHH
28240 Confidence 332 15788999977766666667778889999999876655433222346778888888888
28241
28242
28243 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFA 282 (908)
28244 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~ 282 (908)
28245 ++.+++++.+.+|+++++++.++.++..+.+.+.+.+++. ++++.....+. .+..++...++++.. .++|++++..
28246 T Consensus 128 ~~~~~~~l~~~~~~~i~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ii~~~ 203 (375)
28247 T 3I09_B 128 AKGTGSAVVKQGGKTWFFLTADYAFGKALEKNTADVVKAN-GGKVLGEVRHP--LSASDFSSFLLQAQS-SKAQILGLAN 203 (375)
28248 T ss_dssp CCCCCHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEEC--TTCSCCHHHHHHHHH-TTCSEEEEEC
28249 T ss_pred HHHHHHHHHHcCCCEEEEEEeCcHHHHHHHHHHHHHHHHC-CCEEEEEEeCC--CCccchHHHHHHHHh-cCCCEEEEEe
28250 Confidence 8899998877899999999976667778888888888775 35544322222 122345556666653 4788887776
28251
28252
28253 Q NP_000836.2 283 NEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQ-EEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAE 361 (908)
28254 Q Consensus 283 ~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (908)
28255 .+..+..+++++++.|+...+ ++.......... ... .....+.+.... +.. ...+....|.+
28256 T Consensus 204 ~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----------~~~----~~~~~~~~f~~ 266 (375)
28257 T 3I09_B 204 AGGDTVNAIKAAKEFGITKTM-KLAALLMFINDV--HALGLETTQGLVLTDS----------WYW----NRDQASRQWAQ 266 (375)
28258 T ss_dssp CHHHHHHHHHHHHHTTGGGTC-EEEESSCCHHHH--HHHCHHHHTTCEEEES----------CCT----TSSHHHHHHHH
28259 T ss_pred cchHHHHHHHHHHHcCCCCCe-eEeeccccHHHH--HHcCHhHHcCceEeec----------ccc----CCCHHHHHHHH
28260 Confidence 666778899999888875322 232211111000 000 011122211110 000 00111122333
28261
28262
28263 Q NP_000836.2 362 FWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKE 441 (908)
28264 Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (908)
28265 .+++.++ ..++.++..+|||++++++|++++.. .++..
28266 T Consensus 267 ~~~~~~~---------------------------~~p~~~~~~~yda~~~~~~al~~~~~---------------~~~~~ 304 (375)
28267 T 3I09_B 267 RYFAKMK---------------------------KMPSSLQAADYSSVTTYLKAVQAAGS---------------TDSDK 304 (375)
28268 T ss_dssp HHHHHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHHHTS---------------CCHHH
28269 T ss_pred HHHHHHC---------------------------CCCCHHHHHHHHHHHHHHHHHHHhCC---------------CCHHH
28270 Confidence 2322221 11235677899999999999988642 13456
28271
28272
28273 Q NP_000836.2 442 LLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWT 492 (908)
28274 Q Consensus 442 l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~ 492 (908)
28275 +.++|++..|.|.+| .+.|+.+|++...+.+.+++.+ . ..+|.|.
28276 T Consensus 305 ~~~~l~~~~~~~~~~-~~~~~~~g~~~~~~~i~~~~~~----~-~~~~~~~ 349 (375)
28277 T 3I09_B 305 VMAQLKKMKIDDFYA-KGYIRTDGSMIHDMYLMEVKKP----S-ESKEPWD 349 (375)
28278 T ss_dssp HHHHHTTSCEESSSC-EEEECTTSBEECCEEEEEECCG----G-GCCSTTC
28279 T ss_pred HHHHHhcCCccccCC-ceEEecCCCeEeeEEEEEEeCC----C-CCCCCcc
28280 Confidence 778888777877555 6777777877777888887631 1 4555565
28281
28282
28283 No 104
28284 >5TQ0_B NMDA glutamate receptor subunit, Glutamate; ION CHANNEL, NMDA RECEPTOR, ALLOSTERIC; HET: GOL, NAG, SO4; 2.7A {Mus musculus}
28285 Probab=99.45 E-value=6.5e-18 Score=179.74 Aligned_cols=343 Identities=16% Similarity=0.212 Sum_probs=207.3 Template_Neff=11.700
28286
28287 Q NP_000836.2 46 IILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVR---ILDTCSRDTYALEQSLTFVQA 122 (908)
28288 Q Consensus 46 i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~---~~d~~~~~~~a~~~~~~~~~~ 122 (908)
28289 ++||+++|.++.. +.+.|++++|+. .++|+++++. +.|+.+++..+. +.+++
28290 T Consensus 1 i~ig~i~~~sg~~-------------------~~~~~~~~~n~~--~~~~~~v~l~~~~~~d~~~~~~~~~----~~~~~ 55 (360)
28291 T 5TQ0_B 1 LNIAVLLGHSHDV-------------------TERELRNLWGPE--QATGLPLDVNVVALLMNRTDPKSLI----THVCD 55 (360)
28292 T ss_dssp CEEEEEECSSSCC-------------------CCCCC--------------CSCCEEEEEECSCCSHHHHH----HHHHH
28293 T ss_pred CeEEEEecCCCCh-------------------hHHHHHHccCcc--ccCCCCcEEEEEEeecCCCCHHHHH----HHHHH
28294 Confidence 5799999987631 235577788864 2457777774 477766644333 33333
28295
28296
28297 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKI-SGVIGAAASSVS--IMVANILRLFKIPQISYASTAPELSD-NTRYDFFSRVVPP 198 (908)
28298 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v-~~vIg~~~s~~~--~~va~~~~~~~iP~Is~~~~~~~l~~-~~~~~~~~~~~~~ 198 (908)
28299 ++.. +++ ++++|+.++..+ ..++.++...++|+|++.+..+.+.. ...+++++++.|+
28300 T Consensus 56 l~~~------------------~~v~~~vig~~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (360)
28301 T 5TQ0_B 56 LMSG------------------ARIHGLVFGDDTDQEAVAQMLDFISSQTFIPILGIHGGASMIMADKDPTSTFFQFGAS 117 (360)
28302 T ss_dssp HHHT------------------TCCSEEEEECCSCCTHHHHHHHHHHHHHCCCEEEEEGGGGCCCSCCCTTCCEEESCCC
28303 T ss_pred HHcC------------------CCceEEEEcCCCChHHHHHHHHHHHhhcCCCEEEecCCCcccccCCCCCCceEeecCC
28304 Confidence 3321 456 678898877665 67788889999999998876654432 2247899999999
28305
28306
28307 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIG-GVCIAQSQKIPREPRPGEFEKIIKRLLETPNARA 277 (908)
28308 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v 277 (908)
28309 ...+++++++++.+++|+++++++.++.++....+.+++.+++.+ ++++.....++ ....++. .+++++. .++++
28310 T Consensus 118 ~~~~~~~l~~~~~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~-~~~~i~~-~~~~~ 193 (360)
28311 T 5TQ0_B 118 IQQQATVMLKIMQDYDWHVFSLVTTIFPGYRDFISFIKTTVDNSFVGWDMQNVITLD--TSFEDAK-TQVQLKK-IHSSV 193 (360)
28312 T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESSTTHHHHHHHHHHHHHHSSSCCEECCCEEES--CSSCTHH-HHHHHTT-CCCSE
28313 T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEecCCchHHHHHHHHHHHhcCCCcceeEEEEEec--CCcccHH-HHHHHhc-CCCeE
28314 Confidence 988899999999888999999999887788877788887776542 13443322232 1223455 6666663 57888
28315
28316
28317 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRN 356 (908)
28318 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (908)
28319 |++.........+++++++.|+.. .+.|+..+.+...... .......+.+.
28320 T Consensus 194 vv~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~-------------------------- 245 (360)
28321 T 5TQ0_B 194 ILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTEL--IPKEFPSGLIS-------------------------- 245 (360)
28322 T ss_dssp EEEECCHHHHHHHHHHHHHTTCSSTTSEEEECHHHHCSTTC--CCTTSCTTCEE--------------------------
28323 T ss_pred EEEEcCHHHHHHHHHHHHHcCCCCCCEEEEeecccCCCCcC--CCccCCCceEE--------------------------
28324 Confidence 888777777888999988888753 3567765433221100 00000001000
28325
28326
28327 Q NP_000836.2 357 VWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP--GYIGLCPRM 434 (908)
28328 Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~--~~~~~~~~~ 434 (908)
28329 + . +. .+ ...++..+|||++++++|++++....+. .....|...
28330 T Consensus 246 --~-~-~~-~~------------------------------~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~c~~~ 290 (360)
28331 T 5TQ0_B 246 --V-S-YD-DW------------------------------DYSLEARVRDGLGILTTAASSMLEKFSYIPEAKASCYGQ 290 (360)
28332 T ss_dssp --E-E-SC-CS------------------------------SSCHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCSCSSCC
28333 T ss_pred --E-E-ec-Cc------------------------------cccHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccc
28334 Confidence 0 0 00 00 0124567999999999999987543210 001223211
28335
28336
28337 Q NP_000836.2 435 ---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWA 505 (908)
28338 Q Consensus 435 ---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~ 505 (908)
28339 ....+..+.+.|++..|.|. .+.||++|++. ..+.+++++. ...++.||.|+... +....+.|+
28340 T Consensus 291 ~~~~~~~~~~l~~~l~~~~~~G~---~i~f~~~g~~~~~~~~i~~~~~---~~~~~~vg~w~~~~-l~~~~~~w~ 358 (360)
28341 T 5TQ0_B 291 AEKPETPLHTLHQFMVNVTWDGK---DLSFTEEGYQVHPRLVVIVLNK---DREWEKVGKWENQT-LSLRHAVWP 358 (360)
28342 T ss_dssp -----CCSCCSTTTSSSCEETTE---ECCBCTTSSBSSCCCEEEEECT---TSCEEEEEECTTTT-CCBCCC---
28343 T ss_pred CCCCCChHHHHHHHHcceeEcCe---eeEECCCCceeceEEEEEEeeC---CCceEEEEEEECCe-eEecceecC
28344 Confidence 11245567788888888875 69999999885 6788888873 15789999998762 322335563
28345
28346
28347 No 105
28348 >5TPW_B NMDA glutamate receptor subunit, Glutamate; ION CHANNEL, NMDA RECEPTOR, ALLOSTERIC; HET: NAG, GOL, SO4; 2.909A {Mus musculus}
28349 Probab=99.45 E-value=6.5e-18 Score=179.74 Aligned_cols=343 Identities=16% Similarity=0.212 Sum_probs=203.3 Template_Neff=11.700
28350
28351 Q NP_000836.2 46 IILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVR---ILDTCSRDTYALEQSLTFVQA 122 (908)
28352 Q Consensus 46 i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~---~~d~~~~~~~a~~~~~~~~~~ 122 (908)
28353 ++||+++|.++.. +.+.|++++|+. .++|+++++. +.|+.+++..+. +.+++
28354 T Consensus 1 i~ig~i~~~sg~~-------------------~~~~~~~~~n~~--~~~~~~v~l~~~~~~d~~~~~~~~~----~~~~~ 55 (360)
28355 T 5TPW_B 1 LNIAVLLGHSHDV-------------------TERELRNLWGPE--QATGLPLDVNVVALLMNRTDPKSLI----THVCD 55 (360)
28356 T ss_dssp CEEEEEECSTTCC-------------------CC-------------------CCEEEEEECCCCSHHHHH----HHHHH
28357 T ss_pred CeEEEEecCCCCh-------------------hHHHHHHccCcc--ccCCCCcEEEEEEeecCCCCHHHHH----HHHHH
28358 Confidence 5799999987631 235577788864 2457777774 477766644333 33333
28359
28360
28361 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKI-SGVIGAAASSVS--IMVANILRLFKIPQISYASTAPELSD-NTRYDFFSRVVPP 198 (908)
28362 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v-~~vIg~~~s~~~--~~va~~~~~~~iP~Is~~~~~~~l~~-~~~~~~~~~~~~~ 198 (908)
28363 ++.. +++ ++++|+.++..+ ..++.++...++|+|++.+..+.+.. ...+++++++.|+
28364 T Consensus 56 l~~~------------------~~v~~~vig~~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (360)
28365 T 5TPW_B 56 LMSG------------------ARIHGLVFGDDTDQEAVAQMLDFISSQTFIPILGIHGGASMIMADKDPTSTFFQFGAS 117 (360)
28366 T ss_dssp HHTT------------------SCCSEEEEECSSCCTHHHHHHHHHHHHHCCCEEEEEGGGGCCCSCCCTTCCEEESCCC
28367 T ss_pred HHcC------------------CCceEEEEcCCCChHHHHHHHHHHHhhcCCCEEEecCCCcccccCCCCCCceEeecCC
28368 Confidence 3321 456 678898877665 67788889999999998876654432 2247899999999
28369
28370
28371 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIG-GVCIAQSQKIPREPRPGEFEKIIKRLLETPNARA 277 (908)
28372 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v 277 (908)
28373 ...+++++++++.+++|+++++++.++.++....+.+++.+++.+ ++++.....++ ....++. .+++++. .++++
28374 T Consensus 118 ~~~~~~~l~~~~~~~~~~~v~iv~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~-~~~~i~~-~~~~~ 193 (360)
28375 T 5TPW_B 118 IQQQATVMLKIMQDYDWHVFSLVTTIFPGYRDFISFIKTTVDNSFVGWDMQNVITLD--TSFEDAK-TQVQLKK-IHSSV 193 (360)
28376 T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSTTHHHHHHHHHHHHHTSTTCSEECCCEECC--TTSCHHH-HHHHHTT-CCCSE
28377 T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEecCCchHHHHHHHHHHHhcCCCcceeEEEEEec--CCcccHH-HHHHHhc-CCCeE
28378 Confidence 988899999999888999999999887788877788887776542 13443322232 1223455 6666663 57888
28379
28380
28381 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRN 356 (908)
28382 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (908)
28383 |++.........+++++++.|+.. .+.|+..+.+...... .......+.+.
28384 T Consensus 194 vv~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~-------------------------- 245 (360)
28385 T 5TPW_B 194 ILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTEL--IPKEFPSGLIS-------------------------- 245 (360)
28386 T ss_dssp EEEESCHHHHHHHHHHHHHTTCSSTTSEEEECHHHHCCSSC--CCTTSCTTCEE--------------------------
28387 T ss_pred EEEEcCHHHHHHHHHHHHHcCCCCCCEEEEeecccCCCCcC--CCccCCCceEE--------------------------
28388 Confidence 888777777888999988888753 3567765433221100 00000001000
28389
28390
28391 Q NP_000836.2 357 VWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP--GYIGLCPRM 434 (908)
28392 Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~--~~~~~~~~~ 434 (908)
28393 + . +. .+ ...++..+|||++++++|++++....+. .....|...
28394 T Consensus 246 --~-~-~~-~~------------------------------~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~c~~~ 290 (360)
28395 T 5TPW_B 246 --V-S-YD-DW------------------------------DYSLEARVRDGLGILTTAASSMLEKFSYIPEAKASCYGQ 290 (360)
28396 T ss_dssp --E-E-SC-CT------------------------------TSCHHHHHHHHHHHHHHHHHHTTTSSSSCCCCCSCSCC-
28397 T ss_pred --E-E-ec-Cc------------------------------cccHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccc
28398 Confidence 0 0 00 00 0124567999999999999987543210 001223211
28399
28400
28401 Q NP_000836.2 435 ---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWA 505 (908)
28402 Q Consensus 435 ---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~~~~~~~~i~w~ 505 (908)
28403 ....+..+.+.|++..|.|. .+.||++|++. ..+.+++++. ...++.||.|+... +....+.|+
28404 T Consensus 291 ~~~~~~~~~~l~~~l~~~~~~G~---~i~f~~~g~~~~~~~~i~~~~~---~~~~~~vg~w~~~~-l~~~~~~w~ 358 (360)
28405 T 5TPW_B 291 AEKPETPLHTLHQFMVNVTWDGK---DLSFTEEGYQVHPRLVVIVLNK---DREWEKVGKWENQT-LSLRHAVWP 358 (360)
28406 T ss_dssp -----CCSCCSSTTTSSCEETTE---ECCBCTTSSBSSCCCEEEEEET---TTEEEEEEECTTTT-CCCCC----
28407 T ss_pred CCCCCChHHHHHHHHcceeEcCe---eeEECCCCceeceEEEEEEeeC---CCceEEEEEEECCe-eEecceecC
28408 Confidence 11245567788888888875 69999999885 6788888873 15789999998762 322335563
28409
28410
28411 No 106
28412 >4MAA_A Putative branched-chain amino acid ABC; Psi-Biology, MCSG, Midwest Center For; HET: GOL; 2.0A {Pseudomonas protegens}
28413 Probab=99.44 E-value=9.1e-18 Score=181.66 Aligned_cols=352 Identities=13% Similarity=0.078 Sum_probs=215.8 Template_Neff=12.000
28414
28415 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
28416 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
28417 ....++++||+++|.++... ..+.....|++.|++++|.. .|.++++.+.|+.+++.. ..+.
28418 T Consensus 29 ~~~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~~~~----~g~~i~~~~~d~~~~~~~----~~~~ 90 (403)
28419 T 4MAA_A 29 AFAAEPFTFYGLKSMSGAFA----------SYGKFADMGSRLAVEQYPTL----LGRPLHYKVIDTEGNAGK----AVRR 90 (403)
28420 T ss_dssp -CCCCCEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHTCSEE----TTEEEEEEEEECTTCHHH----HHHH
28421 T ss_pred hhhCCCEEEEEEecCCCCch----------hhhHHHHHHHHHHHHhcCcc----CCeeeEEEEEeCCCCHHH----HHHH
28422 Confidence 45678999999999875321 25667889999999999842 366788888887655432 3333
28423
28424
28425 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVV-PP 198 (908)
28426 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~-~~ 198 (908)
28427 +++++. .++++++|++.++.....+...+...++|+|.+.. .+.+.....+++++++. ++
28428 T Consensus 91 ~~~l~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~-~~~~~~~~~~~~~~~~~~~~ 151 (403)
28429 T 4MAA_A 91 VQEAIA------------------QDGARFFQGCTLSSSALAVAKEVGKVGGVFMTPVG-ADEITGKDCNASTFRWSVPT 151 (403)
28430 T ss_dssp HHHHHH------------------HHCCCEEEECSSHHHHHHHHHHHHHHTCEEEECCC-CGGGGTTTCCTTEEECSCCH
28431 T ss_pred HHHHHH------------------hcCCCEEEecCCcHHHHHHHHHHHhhCCEEEccCC-ccccCCCCCCCceeEeeCCc
28432 Confidence 444332 15788999987776666777778889999998875 33222211256777875 66
28433
28434
28435 Q NP_000836.2 199 DSYQAQAMVDIVTA-LGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARA 277 (908)
28436 Q Consensus 199 ~~~~~~~~~~~l~~-~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v 277 (908)
28437 ....++.+++++.+ .+|++|++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .++|+
28438 T Consensus 152 ~~~~~~~~~~~l~~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~d~ 227 (403)
28439 T 4MAA_A 152 YGAIRETMVPLIKLLPEAKRWYTITPQYVFGEALLEGAKQVCAEH-GIEHIGNSYHS--LQEQEFSGYLTNAIA-ARPDV 227 (403)
28440 T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEEEESSHHHHHHHHHHHHHHHHH-TCEEEEEEEEC--TTCCCCHHHHHHHHH-HCCSE
28441 T ss_pred HHHHHHhhHHHHHhCCCCCEEEEEEeCCHHHHHHHHHHHHHHHHC-CCEEEEEEEec--CCCCChHHHHHHHHH-hCCCE
28442 Confidence 66677788888866 589999999976677778888888888765 35544332222 122345556666653 57888
28443
28444
28445 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNV 357 (908)
28446 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (908)
28447 +++...+..+..+++++++.|+..++.+++.+....... .........+.+..... +.. ...+...
28448 T Consensus 228 v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~~~---~~~~~~~ 293 (403)
28449 T 4MAA_A 228 LVLLNFGSQSSNALRQAVNFGIKERMKVLLVWSAGLDQF-QELGSDVLEGVYLGAQY----------WHQ---VDTPLNR 293 (403)
28450 T ss_dssp EEECCCHHHHHHHHHHHHHHTHHHHSEEEESSCCTHHHH-HHHHHHHHBTCEEEESC----------CTT---CCCHHHH
28451 T ss_pred EEEECCchHHHHHHHHHHHCCCccCcEEEEeccccHHHH-HHHchhhhcCcEEEecc----------ccc---CCCHHHH
28452 Confidence 877765566778888888888753333444322111100 00000112222211100 000 0011112
28453
28454
28455 Q NP_000836.2 358 WFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTI 437 (908)
28456 Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~ 437 (908)
28457 .|.+.+++.++ ..++.++..+||++++++++++++.. .
28458 T Consensus 294 ~f~~~~~~~~~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~---------------~ 331 (403)
28459 T 4MAA_A 294 ELVKLTQAKYG---------------------------INPTYPLAADYIGSKIILDTIAATGS---------------F 331 (403)
28460 T ss_dssp HHHHHHHHHTS---------------------------SCCCHHHHHHHHHHHHHHHHHHHHTC---------------C
28461 T ss_pred HHHHHHHHHHC---------------------------CCCChhHHHHHHHHHHHHHHHHHHCC---------------C
28462 Confidence 23333322221 11234567899999999999988642 2
28463
28464
28465 Q NP_000836.2 438 DGKELLGYIRAVNFNGSAGTPVTFNE-NGDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
28466 Q Consensus 438 ~~~~l~~~l~~~~f~G~~G~~v~Fd~-~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
28467 ++..+.++|++..|.|.+| .+.||+ +++....+.+++++. .. ..+|.|+..
28468 T Consensus 332 ~~~~l~~~l~~~~~~g~~g-~~~f~~~~~~~~~~~~i~~~~~----~~-~~~~~w~~~ 383 (403)
28469 T 4MAA_A 332 DGATVAKAMQGLTYQGPTG-EESIRAGDHQVIKDYYLLVGKA----AA-TMRDKDDLA 383 (403)
28470 T ss_dssp CHHHHHHHHTTCEEEETTE-EEEECTTTCBEECCEEEEEECC----GG-GCSSTTCCE
28471 T ss_pred CHHHHHHHHcCCceecCCe-eEEeCCCCCeeeeeEEEEEeec----cc-ccCCHhHHH
28472 Confidence 3456778888888999988 899997 334445677777762 22 567888755
28473
28474
28475 No 107
28476 >5L1B_D Glutamate receptor 2; Transporter, fusion protein, MEMBRANE PROTEIN; HET: NAG; 4.0A {Rattus norvegicus}
28477 Probab=99.43 E-value=1.1e-17 Score=198.82 Aligned_cols=356 Identities=15% Similarity=0.203 Sum_probs=224.6 Template_Neff=11.600
28478
28479 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTC-SRDTYALEQSLTFVQA 122 (908)
28480 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~-~~~~~a~~~~~~~~~~ 122 (908)
28481 ++++||++.|.++. ....|++.|++++|++ |+++++.+.|+. +++. .+.+.+++
28482 T Consensus 1 ~~i~Ig~~~~~~~~----------------~~~~g~~~a~~~in~~-----g~~i~~~~~d~~~~~~~----~~~~~~~~ 55 (803)
28483 T 5L1B_D 1 NSIQIGGLFPRGAD----------------QEYSAFRVGMVQFSTS-----EFRLTPHIDNLEVANSF----AVTNAFCS 55 (803)
28484 T ss_dssp CEEEEEEEEESSCS----------------HHHHHHHHHHHHTCCS-----SCEEEEEEEEECTTCHH----HHHHHHHH
28485 T ss_pred CceeeEeeeCCCCh----------------HHHHHHHHHHHhhcCC-----CceeeeeeEecCCCCHH----HHHHHHHH
28486 Confidence 36889999998752 4668999999999975 467888888865 3332 22233333
28487
28488
28489 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
28490 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
28491 +.. +++++++|+.++..+..++.++...++|++++..+++ ..+++++++.++ .
28492 T Consensus 56 l~~-------------------~~v~~viG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~-----~~~~~~~~~~~~---~ 108 (803)
28493 T 5L1B_D 56 QFS-------------------RGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTD-----GTHPFVIQMRPD---L 108 (803)
28494 T ss_dssp HHH-------------------TTCSEEECCCCTTTHHHHHHHHHHSCCEEEECSCCCS-----SCCSSEEECSCC---C
28495 T ss_pred HHh-------------------cCeeEEEecCChHHHHHHHHHHcccCCcEEeCCCCCC-----CCCCeEEEecCC---h
28496 Confidence 332 5789999998887777888888899999998876443 247889999988 5
28497
28498
28499 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPR--EPRPGEFEKIIKRLLETPNARAVIM 280 (908)
28500 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
28501 ++++++++++++|+++++++ +++++....+.+.+.+++. ++++.....++. +.+..++...++++++ .++++|++
28502 T Consensus 109 ~~~~~~~l~~~~~~~v~ii~-~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~d~~~~~~~i~~-~~~~~i~~ 185 (803)
28503 T 5L1B_D 109 KGALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK-KWQVTAINVGNINNDKKDETYRSLFQDLEL-KKERRVIL 185 (803)
28504 T ss_dssp HHHHHHHHHHTTCSEEEEEE-CSTTCSHHHHHHHHHHHHH-TCEEEEEECSCCCSSSHHHHHHHHHHHHGG-GTCCCEEE
28505 T ss_pred HHHHHHHHHHhCCCEEEEEE-eCcchHHHHHHHHHHHhhc-CCeEEEEEccCCCCCCCcchhHHHHHHHHh-cCCeEEEE
28506 Confidence 77888888888999999999 5567777777777777664 355544322210 0122456677777763 57899888
28507
28508
28509 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
28510 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
28511 .+....+..+++++++.|+.. .+.|++.+.+...... ........+...... .. ...+....+
28512 T Consensus 186 ~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~----~~~~~~~~f 249 (803)
28513 T 5L1B_D 186 DCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDL-LKIQFGGAEVSGFQI-----------VD----YDDSLVSKF 249 (803)
28514 T ss_dssp ESCHHHHHHHHHHHHHTTCCBTTCEEEECSSBTTTSCC-SSSSSSBCEEEEEEC-----------SC----SSSHHHHHH
28515 T ss_pred ECCHHHHHHHHHHHHHcCCCCCCcEEEEEeCCCCccch-hhcccCCeeEEEEEE-----------Ee----CCchHHHHH
28516 Confidence 877777888999999888754 3567765432211100 000000111111100 00 011112233
28517
28518
28519 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP----GYIGLCPRM- 434 (908)
28520 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~----~~~~~~~~~- 434 (908)
28521 .+.+++.+++. +... ....+..++..+|||++++++|++++...... .....|...
28522 T Consensus 250 ~~~~~~~~~~~-------------~~~~------~~~~~~~~~~~~yda~~~~a~al~~~~~~~~~~~~~~~~~~~~~~~ 310 (803)
28523 T 5L1B_D 250 IERWSTLEEKE-------------YPGA------HTATIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANP 310 (803)
28524 T ss_dssp HHHHTTSCTTT-------------STTC------SSSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCCCTTCSS
28525 T ss_pred HHHHHhcchhh-------------CCCc------ccCCCchHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCcccCC
28526 Confidence 33343332210 0000 00123456788999999999999988653210 000122110
28527
28528
28529 Q NP_000836.2 435 --STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
28530 Q Consensus 435 --~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
28531 ...+++.+.+.|++..|.|.+| ++.|+++|++.. .+.+++++ ++.++.+|.|+..
28532 T Consensus 311 ~~~~~~~~~l~~~l~~~~~~g~~G-~i~f~~~g~~~~~~~~i~~~~----~~~~~~~~~~~~~ 368 (803)
28533 T 5L1B_D 311 AVPWGQGVEIERALKQVQVEGLSG-NIKFDQNGKRINYTINIMELK----TNGPRKIGYWSEV 368 (803)
28534 T ss_dssp CCCCTHHHHHHHHHTTCCCEETTE-ECEECSSCCEESCCEEEEEEC----SSSEEEEEEEETT
28535 T ss_pred CCCccccHHHHHHHHhcCccCCCc-cEEECCCCcEEEEEEEEEEec----cCCceEEEEEecC
28536 Confidence 1124567888888889999988 899999898764 78888887 2467888888854
28537
28538
28539 No 108
28540 >4TLL_D GluN1/GluN2B; Neurotransmitter receptor, NMDA receptor, GluN1/GluN2B; HET: QEM, JEG, NAG; 3.59A {Xenopus laevis}
28541 Probab=99.42 E-value=1.3e-17 Score=198.99 Aligned_cols=340 Identities=15% Similarity=0.200 Sum_probs=214.1 Template_Neff=11.400
28542
28543 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPD--LLSNITLGVRILDTCSRDTYALEQSL 117 (908)
28544 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~--il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
28545 ...+++++||+++|.++ . ++|++++|++++ ++++..+.+...|+.+++..+.+.
28546 T Consensus 5 ~~~~~~i~Ig~~~p~sg--------------~--------~~a~~~~n~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-- 60 (824)
28547 T 4TLL_D 5 AQKHPNMDIAVILVGTT--------------E--------EVAIKDVHEKDDFHHLPVTPRVELVTMQESDPKSIITR-- 60 (824)
28548 T ss_dssp ---CCEEEEEEEEECCS--------------S--------CCCTTC-------CCCSSEEEEEEEEESCCCHHHHHHH--
28549 T ss_pred cccCCCceEEEEEcCCC--------------h--------HHhhhccccCCCcccCCCCceeEEEeCCCCCHHHHHHH--
28550 Confidence 45567899999999763 1 889999998876 455665667777777665443333
28551
28552
28553 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVI-GAAASS--VSIMVANILRLFKIPQISYASTAPE-LSDNTRYDFFS 193 (908)
28554 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vI-g~~~s~--~~~~va~~~~~~~iP~Is~~~~~~~-l~~~~~~~~~~ 193 (908)
28555 +.+++. ++++++++ |+.++. ....++..+...++|++++....+. +++...+++++
28556 T Consensus 61 --~~~l~~------------------~~~v~~vv~G~~~s~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~ 120 (824)
28557 T 4TLL_D 61 --ICDLMS------------------DKKVQGVVFGDDTDQEAIAQILDFISVQTLTPILGIHGGSSMIMADKEEASMFF 120 (824)
28558 T ss_dssp --HHHHHT------------------TTCEEEEEEECCCCCTHHHHHHHHHHHHHTCCEEECSGGGGSCCSCCCTTCCEE
28559 T ss_pred --HHHHhc------------------cCCCEEEEEcCCCChHHHHHHHHHHHHhhCCCEEEecCCCccccccccccceEE
28560 Confidence 333332 15789987 988776 4456677778899999986554432 22233578999
28561
28562
28563 Q NP_000836.2 194 RVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREP-RPGEFEKIIKRLLET 272 (908)
28564 Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~-~~~~~~~~~~~l~~~ 272 (908)
28565 ++.+++..+++++++++++++|+++++++.+++++....+.+++.+++. ++++.......... ...+....++++++
28566 T Consensus 121 ~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 198 (824)
28567 T 4TLL_D 121 QFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFENKVRSTIENS-FVGWELEEVIHLDMSLDDIDSKIQNQLCK- 198 (824)
28568 T ss_dssp ESSBCHHHHHHHHHHHHHHTTCCEEEEEEESSTTHHHHHHHHHHHHHHC-CBCCEEEEEEEECTTSCCSSCHHHHHHTT-
28569 T ss_pred ecCCCHHHHHHHHHHHHHHcCCeEEEEEEEcCCChHHHHHHHHHHHHhc-cCCcEEEEEEEecCChhhhhHHHHHHHHh-
28570 Confidence 9999999999999999988899999999988888888888888877764 34433221111101 11223444555653
28571
28572
28573 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLA 351 (908)
28574 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (908)
28575 .++|+|++......+..+++++++.|+.+ .+.|+..+.|...... .......+.+
28576 T Consensus 199 ~~~~~iv~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~---------------------- 254 (824)
28577 T 4TLL_D 199 LQSPVILLYCTKEEATYIFEVAHSVGLTGYGFTWIVPSLVAGDTDT--VPDEFPTGLI---------------------- 254 (824)
28578 T ss_dssp CCSSEEEEECCHHHHHHHHHHHHHHTTTSTTCEEECCTTTCCCSSC--CCTTSCTTCE----------------------
28579 T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCC--CCCcCCCCee----------------------
28580 Confidence 57899888877777888999999888754 4567765533221100 0000000000
28581
28582
28583 Q NP_000836.2 352 NNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG--YIG 429 (908)
28584 Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~--~~~ 429 (908)
28585 ...+. ..+..+++.+|||++++++|+++.....+.. ...
28586 T Consensus 255 ------------~~~~~---------------------------~~~~~~~~~~Ydav~ll~~a~~~~~~~~~~~~~~~~ 295 (824)
28587 T 4TLL_D 255 ------------SVSYD---------------------------EWDYDLPARVRDGIAIITTAASTMLSEHNSIPQSKS 295 (824)
28588 T ss_dssp ------------EEEEC---------------------------SSSSCHHHHHHHHHHHHHHHHHHHHHHSCC---CCC
28589 T ss_pred ------------EEEee---------------------------cCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCCCcc
28590 Confidence 00000 0112356789999999999999886542210 011
28591
28592
28593 Q NP_000836.2 430 LCPRM---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDA-PGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
28594 Q Consensus 430 ~~~~~---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~-~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
28595 .|... ...++..+.+++++.+|.| | ++.||++|++ ...+.+++++. ++.++.+|.|+..
28596 T Consensus 296 ~~~~~~~~~~~~~~~l~~~l~~~~f~g--G-~~~f~~~g~~~~~~~~i~~~~~---~g~~~~v~~~~~~ 358 (824)
28597 T 4TLL_D 296 SCNNIQESRVYEAHMLKRYLINVTFEG--R-DLSFSEDGYQMHPKLVIILLNQ---ERKWERVGKYKDR 358 (824)
28598 T ss_dssp CSSCCTTCCHHHHHHHHHHHHCCEETT--E-ECCBCTTSSBSSCCEEEEEECT---TSCEEEEEEECSS
28599 T ss_pred cccccccccceeHHHHHHHHhcCccCC--c-eeeeCCCCccceeeEEEEEecC---CcceEEEEEEECc
28600 Confidence 22211 1124567888888889988 7 8999999987 46788888873 3578899998764
28601
28602
28603 No 109
28604 >4TLM_D GluN1/GluN2B; neurotransmitter receptor, NMDA receptor, GluN1/GluN2B; HET: NAG, QEM, JEG; 3.77A {Xenopus laevis}
28605 Probab=99.42 E-value=1.3e-17 Score=198.99 Aligned_cols=340 Identities=15% Similarity=0.200 Sum_probs=216.8 Template_Neff=11.400
28606
28607 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPD--LLSNITLGVRILDTCSRDTYALEQSL 117 (908)
28608 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~--il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
28609 ...+++++||+++|.++ . ++|++++|++++ ++++..+.+...|+.+++..+.+.
28610 T Consensus 5 ~~~~~~i~Ig~~~p~sg--------------~--------~~a~~~~n~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-- 60 (824)
28611 T 4TLM_D 5 AQKHPNMDIAVILVGTT--------------E--------EVAIKDVHEKDDFHHLPVTPRVELVTMQESDPKSIITR-- 60 (824)
28612 T ss_dssp ------CEEEEEEECTT--------------C--------CCTHHHHHHTTTTTTSSSCCEEEEEEESSCCHHHHHHH--
28613 T ss_pred cccCCCceEEEEEcCCC--------------h--------HHhhhccccCCCcccCCCCceeEEEeCCCCCHHHHHHH--
28614 Confidence 45567899999999763 1 889999998876 455665667777777665443333
28615
28616
28617 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVI-GAAASS--VSIMVANILRLFKIPQISYASTAPE-LSDNTRYDFFS 193 (908)
28618 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vI-g~~~s~--~~~~va~~~~~~~iP~Is~~~~~~~-l~~~~~~~~~~ 193 (908)
28619 +.+++. ++++++++ |+.++. ....++..+...++|++++....+. +++...+++++
28620 T Consensus 61 --~~~l~~------------------~~~v~~vv~G~~~s~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~ 120 (824)
28621 T 4TLM_D 61 --ICDLMS------------------DKKVQGVVFGDDTDQEAIAQILDFISVQTLTPILGIHGGSSMIMADKEEASMFF 120 (824)
28622 T ss_dssp --HHHHHH------------------HHCCSEEEEEESCCCSHHHHHHHHHHHHHCCCEEECSHHHHSCCSCCCSSSCEE
28623 T ss_pred --HHHHhc------------------cCCCEEEEEcCCCChHHHHHHHHHHHHhhCCCEEEecCCCccccccccccceEE
28624 Confidence 333332 15789987 988776 4456677778899999986554432 22233578999
28625
28626
28627 Q NP_000836.2 194 RVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREP-RPGEFEKIIKRLLET 272 (908)
28628 Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~-~~~~~~~~~~~l~~~ 272 (908)
28629 ++.+++..+++++++++++++|+++++++.+++++....+.+++.+++. ++++.......... ...+....++++++
28630 T Consensus 121 ~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 198 (824)
28631 T 4TLM_D 121 QFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFENKVRSTIENS-FVGWELEEVIHLDMSLDDIDSKIQNQLCK- 198 (824)
28632 T ss_dssp ESSCCHHHHHHHHHHHHHHTTCCEEEEEEESSTTTTHHHHHHHHHHHHS-SSCCEEEEEEEECSSSCCSSCHHHHHHTT-
28633 T ss_pred ecCCCHHHHHHHHHHHHHHcCCeEEEEEEEcCCChHHHHHHHHHHHHhc-cCCcEEEEEEEecCChhhhhHHHHHHHHh-
28634 Confidence 9999999999999999988899999999988888888888888877764 34433221111101 11223444555653
28635
28636
28637 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLA 351 (908)
28638 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (908)
28639 .++|+|++......+..+++++++.|+.+ .+.|+..+.|...... .......+.+
28640 T Consensus 199 ~~~~~iv~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~---------------------- 254 (824)
28641 T 4TLM_D 199 LQSPVILLYCTKEEATYIFEVAHSVGLTGYGFTWIVPSLVAGDTDT--VPDEFPTGLI---------------------- 254 (824)
28642 T ss_dssp CCCSEEEEESCHHHHHHHHHHHHHHTTTSTTCEEEECHHHHTTSSC--CCTTSCTTCE----------------------
28643 T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCCCCeEEEeeccCCCCCCC--CCCcCCCCee----------------------
28644 Confidence 57899888877777888999999888754 4567765533221100 0000000000
28645
28646
28647 Q NP_000836.2 352 NNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG--YIG 429 (908)
28648 Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~--~~~ 429 (908)
28649 ...+. ..+..+++.+|||++++++|+++.....+.. ...
28650 T Consensus 255 ------------~~~~~---------------------------~~~~~~~~~~Ydav~ll~~a~~~~~~~~~~~~~~~~ 295 (824)
28651 T 4TLM_D 255 ------------SVSYD---------------------------EWDYDLPARVRDGIAIITTAASTMLSEHNSIPQSKS 295 (824)
28652 T ss_dssp ------------EEECC---------------------------TTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
28653 T ss_pred ------------EEEee---------------------------cCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCCCcc
28654 Confidence 00000 0112356789999999999999886542210 011
28655
28656
28657 Q NP_000836.2 430 LCPRM---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDA-PGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
28658 Q Consensus 430 ~~~~~---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~-~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
28659 .|... ...++..+.+++++.+|.| | ++.||++|++ ...+.+++++. ++.++.+|.|+..
28660 T Consensus 296 ~~~~~~~~~~~~~~~l~~~l~~~~f~g--G-~~~f~~~g~~~~~~~~i~~~~~---~g~~~~v~~~~~~ 358 (824)
28661 T 4TLM_D 296 SCNNIQESRVYEAHMLKRYLINVTFEG--R-DLSFSEDGYQMHPKLVIILLNQ---ERKWERVGKYKDR 358 (824)
28662 T ss_dssp CSSSCCCTTCTTHHHHHHHHTSCEETT--E-ECCBCTTSBBSCCCEEEEEECS---TTCEEEEEEEETT
28663 T ss_pred cccccccccceeHHHHHHHHhcCccCC--c-eeeeCCCCccceeeEEEEEecC---CcceEEEEEEECc
28664 Confidence 22211 1124567888888889988 7 8999999987 46788888873 3578899998764
28665
28666
28667 No 110
28668 >4EYQ_A Extracellular ligand-binding receptor; PSI-BIOLOGY, MCSG, MIDWEST CENTER FOR; HET: DHC, MSE, ENO; 1.96A {Rhodopseudomonas palustris}
28669 Probab=99.41 E-value=1.8e-17 Score=176.21 Aligned_cols=348 Identities=13% Similarity=0.160 Sum_probs=206.9 Template_Neff=12.200
28670
28671 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
28672 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
28673 ...++++||+++|..+... ..+.....+++.|++++| |+++++.+.|+.+++.. ..+.+
28674 T Consensus 3 ~~~~~~~Ig~i~~~~~~~~----------~~~~~~~~~~~~a~~~~~-------g~~i~~~~~d~~~~~~~----~~~~~ 61 (362)
28675 T 4EYQ_A 3 AETNEITVGITVTTTGPAA----------ALGIPERNALEFVAKEIG-------GHPIKMIVLDDGGDPTA----ATTNA 61 (362)
28676 T ss_dssp CCCSSEEEEEEECCSSTTH----------HHHHHHHHHGGGSCSEET-------TEEEEEEEEECTTCHHH----HHHHH
28677 T ss_pred ccCCcEEEEEEEeCCCccH----------HhCccHHHHHHHHHHHhC-------CEEEEEEEEeCCCCHHH----HHHHH
28678 Confidence 3456899999999875321 245677888999998875 35567777776655332 22333
28679
28680
28681 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
28682 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
28683 ++++. .+++++||++.++.....+...+...++|+|.+...... ....++++++.+++.
28684 T Consensus 62 ~~l~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~---~~~~~~~~~~~~~~~ 120 (362)
28685 T 4EYQ_A 62 RRFVT------------------ESKADVIMGSSVTPPTVAVSNVANEAQVPHIALAPLPVT---PERAKWSVVMPQPIP 120 (362)
28686 T ss_dssp HHHHH------------------TSCCSEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCC---HHHHTTEEECSCCHH
28687 T ss_pred HHHHH------------------hCCCCEEEecCCChhHHHHHHHHHHhCCCEEEecCCCCC---CcccceeEEcCCCHH
28688 Confidence 43332 157889998876665556667788899999987654321 112466778888888
28689
28690
28691 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
28692 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
28693 ..++.+++++.+.+|+++++++.++.++..+.+.+++.+++. ++++.....+. .+..+....+++++. .++|++++
28694 T Consensus 121 ~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~i~~ 196 (362)
28695 T 4EYQ_A 121 IMGKVLYEHMKKNNIKTVGYIGYSDSYGDLWFNDLKKQGEAM-GLKIVAEERFA--RPDTSVAGQVLKLVA-ANPDAILV 196 (362)
28696 T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHCCCCCHHT-TCEEEEEEEEC--TTCSCCHHHHHHHHH-HCCSEEEE
28697 T ss_pred HHHHHHHHHHHhCCCcEEEEEeecChhHHHHHHHHHHHHHHc-CCeEeeeeeeC--CCCCCHHHHHHHHHH-cCCCEEEE
28698 Confidence 888899999888899999999866667777888888888765 35544322222 122345566666663 57898877
28699
28700
28701 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
28702 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
28703 +..+..+..+++++++.|+. ..|++.+.+...... ........+.+........... .............|.
28704 T Consensus 197 ~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~f~ 268 (362)
28705 T 4EYQ_A 197 GASGTAAALPQTALRERGYN--GLIYQTHGAASMDFI-RIAGKSAEGVLMASGPVMDPEG-----QNDSALTKKPGLELN 268 (362)
28706 T ss_dssp ECCGGGGHHHHHHHHHTTCC--SEEEECGGGCSHHHH-HHHGGGGTTCEEEECGGGCTTT-----SCTTCTTHHHHHHHH
28707 T ss_pred eCChhHhHHHHHHHHHCCCC--ceEEeccccCcHHHH-HHhhhhhcCeEEeecccCCccc-----CCChhhcCCCChHHH
28708 Confidence 66666677888888888874 356655433221110 0011122232221110000000 000000000111222
28709
28710
28711 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
28712 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
28713 +.+.+.++. ..+..++..+||++++++++++++....... ...+++
28714 T Consensus 269 ~~~~~~~~~--------------------------~~~~~~~~~~yda~~~~~~a~~~~~~~~~~~--------~~~~~~ 314 (362)
28715 T 4EYQ_A 269 TAYETKYGP--------------------------NSRSQFAGHSFDAFKVLERVIPVALKTAKPG--------TQEFRE 314 (362)
28716 T ss_dssp HHHHHHHCT--------------------------TCCCHHHHHHHHHHHHHHHHHHHHTTTCCTT--------SHHHHH
28717 T ss_pred HHHHHHHCC--------------------------CCCCccccchhHHHHHHHHHHHHHHHhCCCC--------ChHHHH
28718 Confidence 222221110 0123567789999999999998875432100 012456
28719
28720
28721 Q NP_000836.2 441 ELLGYIRA-VNFNGSAGTPVTFNENGD---APGRYDIFQYQ 477 (908)
28722 Q Consensus 441 ~l~~~l~~-~~f~G~~G~~v~Fd~~G~---~~~~~~i~~~~ 477 (908)
28723 .+.++|++ ..|.|.+| ++.|+++++ +...+.+++++
28724 T Consensus 315 ~l~~~l~~~~~~~g~~g-~~~f~~~~~~~~~~~~~~i~~~~ 354 (362)
28725 T 4EYQ_A 315 AIRKALLTEKDIAASQG-VYSFTETDRYGLDDRSRILLTVK 354 (362)
28726 T ss_dssp HHHHHHHHCCCEEETTE-EECCCSSCSSCCCGGGCEEEEEE
28727 T ss_pred HHHHHHHhcCCccccce-EEEecCCCCCCCCCCCcEEEEEE
28728 Confidence 77888877 68999988 899987654 22355666665
28729
28730
28731 No 111
28732 >3LKB_B Probable branched-chain amino acid ABC; branched amino acid, ABC transporter; HET: VAL; 2.4A {Thermus thermophilus}
28733 Probab=99.41 E-value=1.9e-17 Score=178.40 Aligned_cols=360 Identities=13% Similarity=0.146 Sum_probs=216.8 Template_Neff=11.800
28734
28735 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
28736 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
28737 .+.+++||+++|.++.. ...+.....+++.|++++|+.+++ +|+++++.+.|+.+++.. ..+.++
28738 T Consensus 4 ~~~~~~Ig~~~~~~~~~----------~~~~~~~~~g~~~a~~~~n~~g~~-~g~~~~~~~~d~~~~~~~----~~~~~~ 68 (392)
28739 T 3LKB_B 4 GQQQVTLFWSGAITGPT----------SDAGAPYGAAVEDYCKWANERKLV-PGVVFNCVVRDDQYNNAN----TQRFFE 68 (392)
28740 T ss_dssp CCEEEEEEEEECSSSTT----------HHHHHHHHHHHHHHHHHHHHHTSS-TTEEEEEEEEECTTCHHH----HHHHHH
28741 T ss_pred ccCcEEEEEEecCCCCc----------cccchhhHHHHHHHHHHHHHCCCC-CCEEEEEEEEeCCCChHH----HHHHHH
28742 Confidence 45689999999986532 125567889999999999987654 477888888887665432 233333
28743
28744
28745 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
28746 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
28747 +++.+ +++++++++ ++.....+...+...++|+|......+. .....+++++++.+++..
28748 T Consensus 69 ~l~~~------------------~~~~~ii~~-~~~~~~~~~~~~~~~~ip~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 128 (392)
28749 T 3LKB_B 69 EAVDR------------------FKIPVFLSY-ATGANLQLKPLIQELRIPTIPASMHIEL-IDPPNNDYIFLPTTSYSE 128 (392)
28750 T ss_dssp HHHHH------------------HCCSCEEEC-CHHHHHHHHHHHHHHTCCEEESCCCGGG-TSSSSCTTBCEEECCHHH
28751 T ss_pred HHHHc------------------cCCCEEEec-ccHHHHhHHHHHHHhCCCeeccccChHH-cCCCCCCceeecCCCHHH
28752 Confidence 33321 467888854 4544556667778889999987654322 111235678888999888
28753
28754
28755 Q NP_000836.2 202 QAQAMVDIVT-ALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
28756 Q Consensus 202 ~~~~~~~~l~-~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
28757 .++.+++++. +++|+++++++.++.++..+.+.+.+.+++. ++++.....+. ....+....+++++. .+++++++
28758 T Consensus 129 ~~~~~~~~l~~~~~~~~i~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ii~ 204 (392)
28759 T 3LKB_B 129 QVVALLEYIAREKKGAKVALVVHPSPFGRAPVEDARKAAREL-GLQIVDVQEVG--SGNLDNTALLKRFEQ-AGVEYVVH 204 (392)
28760 T ss_dssp HHHHHHHHHHHHSTTCEEEEEECSSHHHHTTHHHHHHHHHHH-TCEEEEEEECC--TTCCCCHHHHHHHHH-TTCCEEEE
28761 T ss_pred HHHHHHHHHHHhcCCCeEEEEECCCHhhcccHHHHHHHHHHc-CCeEEEEEecC--CCCCCHHHHHHHHHH-cCCCEEEE
28762 Confidence 8999999984 6799999999976667777888888888775 35554322222 122345556666663 57888877
28763
28764
28765 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
28766 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
28767 ...+..+..+++++++.|+. ..+++.+.+...... ........+.+...... .. ........+.
28768 T Consensus 205 ~~~~~~~~~~~~~~~~~g~~--~~i~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~----------~~---~~~~~~~~~~ 268 (392)
28769 T 3LKB_B 205 QNVAGPVANILKDAKRLGLK--MRHLGAHYTGGPDLI-ALAGDAAEGFLWATSFY----------MA---HEDTPGIRLQ 268 (392)
28770 T ss_dssp ESCHHHHHHHHHHHHHTTCC--CEEEECGGGCSHHHH-HHHGGGGTTCEEEESBC----------CT---TSCCHHHHHH
28771 T ss_pred eCCChhHHHHHHHHHHcCCC--CcEEEccccCCHHHH-HHHHHHhCCEEEEeccC----------CC---CCCCHHHHHH
28772 Confidence 76566677889999888874 345554432221110 00111122222111100 00 0000111122
28773
28774
28775 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
28776 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
28777 +.+.+.++... ..........+||++++++.|++++.... ...+++
28778 T Consensus 269 ~~~~~~~~~~~-----------------------~~~~~~~~~~~yda~~~l~~al~~~~~~~-----------~~~~~~ 314 (392)
28779 T 3LKB_B 269 KEIGRKYGRPE-----------------------NFIESVNYTNGMLAAAIAVEAIRRAQERF-----------KRITNE 314 (392)
28780 T ss_dssp HHHHHHTTCCH-----------------------HHHTCHHHHHHHHHHHHHHHHHHHHHHHH-----------SCCSHH
28781 T ss_pred HHHHHHHCCCc-----------------------hhhcchHHHHHHHHHHHHHHHHHHHHHHh-----------CCCCHH
28782 Confidence 22222221100 00000112268999999999998875421 012455
28783
28784
28785 Q NP_000836.2 441 ELLGYIRAVN----------FNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
28786 Q Consensus 441 ~l~~~l~~~~----------f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
28787 .+.+.|++.. |.|.+|.++.|+++|++. ..+.+++++ ++.++.|+.|...
28788 T Consensus 315 ~l~~~l~~~~~~~~~~~~~~~~g~~G~~i~f~~~~~~~~~~~~i~~~~----~g~~~~v~~~~~~ 375 (392)
28789 T 3LKB_B 315 TVYQAIVGMNGPNAFKPGFAVSTKQGVEIDFTKSEHTGAEGLRILEAK----GGRFVPVTEPFTS 375 (392)
28790 T ss_dssp HHHHHHHTCSGGGCBCCSSBCCCSSSCSBCCCSSCCEEECCBEEEEEE----TTEEEECSCCBCC
28791 T ss_pred HHHHHHHhccCCCCCCCccccccCCcceeeeccCCCCCCccEEEEEEc----CCEEEECCCCcCH
28792 Confidence 6667776553 556665369999887765 567787776 3578999999865
28793
28794
28795 No 112
28796 >4F8J_A Putative branched-chain amino acid transport; lignin degratation, Structural Genomics, PSI-Biology; HET: GOL, EPE, SO4, HC4; 1.6A {Rhodopseudomonas palustris}
28797 Probab=99.39 E-value=2.8e-17 Score=174.67 Aligned_cols=348 Identities=14% Similarity=0.158 Sum_probs=206.1 Template_Neff=12.300
28798
28799 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
28800 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
28801 ...++++||+++|..+... ..+.....+++.+++++| |+++++.+.|+.+++. ...+.+
28802 T Consensus 3 ~~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~~-------g~~~~~~~~d~~~~~~----~~~~~~ 61 (362)
28803 T 4F8J_A 3 AETNEITIGITVTTTGPAA----------ALGIPERNALEFVAKEIG-------GHPLKVIVLDDGGDPT----AATTNA 61 (362)
28804 T ss_dssp -CCSSEEEEEEECCSSTTH----------HHHHHHHHGGGGSCSEET-------TEEEEEEEEECTTCHH----HHHHHH
28805 T ss_pred ccCCceEEEEEEcCCCchH----------HhCchHHHHHHHHHHHhC-------CEEEEEEEEeCCCCHH----HHHHHH
28806 Confidence 3456899999999875321 245677888888888875 4567777777655532 222333
28807
28808
28809 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
28810 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
28811 ++++. .++++++|++.++.....+...+...++|+|..+..... ....++++++.+++.
28812 T Consensus 62 ~~~~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~---~~~~~~~~~~~~~~~ 120 (362)
28813 T 4F8J_A 62 RRFVT------------------ESKADVIMGSSVTPPTVAVSNVANEAQVPHIALAPLPIT---PERAKWSVAMPQPIP 120 (362)
28814 T ss_dssp HCCCC------------------CSCCSEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCC---TTTTTTEEECSCCHH
28815 T ss_pred HHHHh------------------hcCCCEEEecCCChHHHHHHHHHHHhCCCEEEcCCCCCC---ccccceeeecCCChH
28816 Confidence 33332 157899998876665556677788899999987653221 113467788888888
28817
28818
28819 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
28820 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
28821 ..++.+++++.+.+|++|++++.++.++..+.+.+++.+++. ++++.....+. ....+....+++++. .+++++++
28822 T Consensus 121 ~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ii~ 196 (362)
28823 T 4F8J_A 121 IMGKVLYEHMKKNNIKTVGYIGYSDSYGDLWFNDLKKQGEAM-GLKIVAEERFA--RPDTSVAGQVLKLVA-ANPDAILV 196 (362)
28824 T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHCCCCCHHT-TCEEEEEEEEC--TTCSCCHHHHHHHHH-HCCSEEEE
28825 T ss_pred HHHHHHHHHHHhCCCeEEEEEEecCcchHHHHHHHHHHHHHc-CCEEEeeeeeC--CCCCChHHHHHHHHH-cCCCEEEE
28826 Confidence 888899999888899999999966667777788888887765 35554322222 122345556666653 57888877
28827
28828
28829 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
28830 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
28831 +.++..+..+++++++.|+. ..|++.+.+...... ........+.+........... . ... .........|.
28832 T Consensus 197 ~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~-~~~-~~~~~~~~~f~ 268 (362)
28833 T 4F8J_A 197 GASGTAAALPQTSLRERGYK--GLIYQTHGAASMDFI-RIAGKSAEGVLMASGPVMDPEG---Q-DDS-ALTKKPGLELN 268 (362)
28834 T ss_dssp ECCHHHHHHHHHHHHHTTCC--SEEEECGGGCBTHHH-HHHGGGGTTCEEEECGGGCGGG---S-CTT-CTTHHHHHHHH
28835 T ss_pred eCCHHHchHHHHHHHHCCCC--ceEEeecccCCHHHH-HHccccccCeEEecccccCcCC---C-Cch-hhcCCcchHHH
28836 Confidence 76666677888998888874 355555433221110 0011122232221110000000 0 000 00000111222
28837
28838
28839 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
28840 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
28841 +.+++.++. ..++.++..+||+++++++|++++....... ...+++
28842 T Consensus 269 ~~~~~~~~~--------------------------~~~~~~~~~~yda~~~~~~a~~~~~~~~~~~--------~~~~~~ 314 (362)
28843 T 4F8J_A 269 TAYEAKYGP--------------------------NSRSQFAAHSFDAFKVLERVVPVALKTAKPG--------TQEFRE 314 (362)
28844 T ss_dssp HHHHHHHCT--------------------------TCCBHHHHHHHHHHHHHHHHHHHHHTTCCTT--------SHHHHH
28845 T ss_pred HHHHHHHCC--------------------------CCCCccccchhHHHHHHHHHHHHHHHhCCCC--------CHHHHH
28846 Confidence 222221110 0123567889999999999998665432100 013456
28847
28848
28849 Q NP_000836.2 441 ELLGYIRA-VNFNGSAGTPVTFNENGDA---PGRYDIFQYQ 477 (908)
28850 Q Consensus 441 ~l~~~l~~-~~f~G~~G~~v~Fd~~G~~---~~~~~i~~~~ 477 (908)
28851 .+.+.|++ ..|.|.+| ++.|+++++. ...+.+++++
28852 T Consensus 315 ~l~~~l~~~~~~~g~~g-~i~f~~~~~~~~~~~~~~i~~~~ 354 (362)
28853 T 4F8J_A 315 AIRKALVSEKDIAASQG-VYSFTETDRYGLDDRSRILLTVK 354 (362)
28854 T ss_dssp HHHHHHHHSCCEECSSC-EECCCSSCSSCCCGGGCEEEEEE
28855 T ss_pred HHHHHHHhccCccccce-eEEecCCCCCCcCcCCcEEEEEE
28856 Confidence 78888887 58999988 8999986542 2356677765
28857
28858
28859 No 113
28860 >4U4G_D GluA2*; Ionotropic glutamate receptor, AMPA receptor; HET: NAG, ZK1, BMA; 4.49A {Rattus norvegicus}
28861 Probab=99.39 E-value=2.9e-17 Score=195.81 Aligned_cols=356 Identities=15% Similarity=0.188 Sum_probs=224.1 Template_Neff=11.500
28862
28863 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTC-SRDTYALEQSLTFVQA 122 (908)
28864 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~-~~~~~a~~~~~~~~~~ 122 (908)
28865 ++++||++.|.++. ....|++.|++++|++ |+++++.+.|+. +++. .+.+.+++
28866 T Consensus 1 ~~i~Ig~~~~~~g~----------------~~~~g~~~a~~~in~~-----g~~l~~~~~d~~~~~~~----~~~~~~~~ 55 (822)
28867 T 4U4G_D 1 NSIQIGGLFPRGAD----------------QEYSAFRVGMVQFSTS-----EFRLTPHIDNLEVANSF----AVTNAFCS 55 (822)
28868 T ss_dssp CEEEEEEEEETTCH----------------HHHHHHHHHHHHHCCS-----SCEEEEEEEEECTTCHH----HHHHHHHH
28869 T ss_pred CceeEEEecCCCCh----------------HHHHHHHHHHhhccCC-----CceeeeeEEecCCCCHH----HHHHHHHH
28870 Confidence 36899999988742 4678999999999975 467888888865 3322 22233333
28871
28872
28873 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
28874 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
28875 +.. +++++++|+.++..+.++++.+...++|+++++.+++ ..+++++++.++ .
28876 T Consensus 56 l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~-----~~~~~~~~~~~~---~ 108 (822)
28877 T 4U4G_D 56 QFS-------------------RGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTD-----GTHPFVIQMRPD---L 108 (822)
28878 T ss_dssp HHH-------------------HCCSCEEECCCTTTHHHHHHHHHHHCCCEEESSCCCS-----SCCSSEEECSCC---C
28879 T ss_pred HHh-------------------hCeeEEEecCChhHHHHHHHHHhccCCeEEeCCCCCC-----CCCCeEEEecCC---H
28880 Confidence 332 5789999998887777888888899999998876543 246889999887 4
28881
28882
28883 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPR--EPRPGEFEKIIKRLLETPNARAVIM 280 (908)
28884 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
28885 ++.+++++++++|+++++++ +++++....+.+++.+++. ++++.....++. +.+..++...++++++ .++|+|++
28886 T Consensus 109 ~~~~~~~l~~~~~~~v~iv~-~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~ 185 (822)
28887 T 4U4G_D 109 KGALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK-KWQVTAINVGNINNDKKDETYRSLFQDLEL-KKERRVIL 185 (822)
28888 T ss_dssp HHHHHHHHHHTTCCEEEEEE-CGGGCTHHHHHHHHHHHHH-TCEEEEEECSSCCSSSCSTTTTTHHHHTTS-SCCCEEEE
28889 T ss_pred HHHHHHHHHHcCCCEEEEEE-cCcchHHHHHHHHHHHHhc-CCeEEEEEccCCCCCCCcchhHHHHHHHHh-cCCcEEEE
28890 Confidence 67788888888999999999 5667777777787777764 455544332210 0122456667777763 57899988
28891
28892
28893 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
28894 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
28895 .+....+..+++++++.|+.. .+.|++.+.+...... ........+....... ....+....|
28896 T Consensus 186 ~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~~f 249 (822)
28897 T 4U4G_D 186 DCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDL-LKIQFGGAEVSGFQIV---------------DYDDSLVSKF 249 (822)
28898 T ss_dssp ESCHHHHHHHHHHHHHHTCSSTTCEEEECSSBTTTSCC-TTTTTSSCEEEEEESS---------------CTTSHHHHHH
28899 T ss_pred ECCHHHHHHHHHHHHHhCCCCCCeEEEEeeCCCCCCch-HhcccCCeeEEEEEEe---------------eCCchHHHHH
28900 Confidence 877767788899998888753 3566665422211100 0000001111111000 0011122233
28901
28902
28903 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP----GYIGLCPRM- 434 (908)
28904 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~----~~~~~~~~~- 434 (908)
28905 .+.+++.++.... + . ....++.++..+|||++++++|++++...... .....|...
28906 T Consensus 250 ~~~~~~~~~~~~~-----------~--~------~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 310 (822)
28907 T 4U4G_D 250 IERWSTLEEKEYP-----------G--A------HTATIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANP 310 (822)
28908 T ss_dssp HHHHTTSCTTTST-----------T--C------CSSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCCCTTCSS
28909 T ss_pred HHHHHhcchhcCC-----------C--C------CCCCCchhHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCCccCC
28910 Confidence 3434333321000 0 0 00123456788999999999999998653210 001122211
28911
28912
28913 Q NP_000836.2 435 --STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
28914 Q Consensus 435 --~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
28915 ...+++.+.++|++..|.|.+| ++.|+++|++.. .+.+++++ ++.++.+|.|...
28916 T Consensus 311 ~~~~~~~~~l~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~i~~~~----~~~~~~v~~~~~~ 368 (822)
28917 T 4U4G_D 311 AVPWGQGVEIERALKQVQVEGLSG-NIKFDQNGKRINYTINIMELK----TNGPRKIGYWSEV 368 (822)
28918 T ss_dssp CCCCTTHHHHHHHHHHCCEEETTE-EECBCTTCCBCSCCEEEEEEE----TTEEEEEEEEETT
28919 T ss_pred CCCccchHHHHHHHHhccccCCCc-cEEECCCCcEEEeEEEEEEec----CCCceeeEEeeCC
28920 Confidence 1124567888888889999988 899999888764 78888887 3568888888753
28921
28922
28923 No 114
28924 >6PEQ_D Glutamate receptor 2, Protein cornichon; ionotropic glutamate receptor, AMPA receptor; HET: CLR, OLC, PAM, ZK1; 2.97A {Rattus norvegicus}
28925 Probab=99.39 E-value=3.4e-17 Score=196.89 Aligned_cols=360 Identities=15% Similarity=0.192 Sum_probs=225.1 Template_Neff=11.200
28926
28927 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILD-TCSRDTYALEQSLT 118 (908)
28928 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d-~~~~~~~a~~~~~~ 118 (908)
28929 ...+++++||++.|.++. ....|++.|++++|++ |.++++.+.| +++++.. +.+
28930 T Consensus 21 ~~~~~~i~Ig~~~~~~g~----------------~~~~g~~~a~~~in~~-----g~~l~~~~~d~~~~~~~~----~~~ 75 (889)
28931 T 6PEQ_D 21 GVSSNSIQIGGLFPRGAD----------------QEYSAFRVGMVQFSTS-----EFRLTPHIDNLEVANSFA----VTN 75 (889)
28932 T ss_pred hccCCeEEEeEeeCCCCh----------------HHHHHHHHHHHhcccc-----CceeccceeecCccCHHH----HHH
28933 Confidence 456689999999998652 4678999999999975 4678888888 4444322 223
28934
28935
28936 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
28937 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
28938 .+++++. +++++++|+.++..+.+++..+...++|++++...++ ..+++++++.++
28939 T Consensus 76 ~~~~l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~-----~~~~~~~~~~~~ 131 (889)
28940 T 6PEQ_D 76 AFCSQFS-------------------RGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTD-----GTHPFVIQMRPD 131 (889)
28941 T ss_pred HHHHHHh-------------------cCeeEEEEcCChHHHHHHHHHHhccCCcEEEcCCCCC-----CCCCcEEEeecC
28942 Confidence 3333332 5789999998887777888888999999998876443 247889999887
28943
28944
28945 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPR--EPRPGEFEKIIKRLLETPNAR 276 (908)
28946 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~ 276 (908)
28947 .++++++++++++|+++++++ +++++....+.+++.+++. ++++......+. ..+..++...++++++ .++|
28948 T Consensus 132 ---~~~~~~~~~~~~~~~~v~ii~-~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~ 205 (889)
28949 T 6PEQ_D 132 ---LKGALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK-KWQVTAINVGNINNDKKDETYRSLFQDLEL-KKER 205 (889)
28950 T ss_pred ---hHHHHHHHHHHhCCCEEEEEE-eCcchhHHHHHHHHHHHhh-CCeEEEEEccCCCCCCCchhhHHHHHHhcc-CCCe
28951 Confidence 577888888888999999999 5567777777787777765 355543322210 0112355667777763 5789
28952
28953
28954 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRR 355 (908)
28955 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (908)
28956 +|++...+..+..+++++++.|+.. .+.|++.+.+...... ........+....... ....+.
28957 T Consensus 206 ~vi~~~~~~~~~~~l~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~ 269 (889)
28958 T 6PEQ_D 206 RVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDL-LKIQFGGANVSGFQIV---------------DYDDSL 269 (889)
28959 T ss_pred EEEEECCHHHHHHHHHHHHHhCCCCCCeEEEEEeCCCCcccH-HHhccCCcceEEEEEe---------------eCCcHH
28960 Confidence 9988877777888999998888753 4567765532221100 0000001111110000 000111
28961
28962
28963 Q NP_000836.2 356 NVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP----GYIGLC 431 (908)
28964 Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~----~~~~~~ 431 (908)
28965 ...|.+.+.+.++.. +... ....++.++..+|||+++++.|++++...... .....|
28966 T Consensus 270 ~~~f~~~~~~~~~~~-------------~~~~------~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~~~~ 330 (889)
28967 T 6PEQ_D 270 VSKFIERWSTLEEKE-------------YPGA------HTATIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDC 330 (889)
28968 T ss_pred HHHHHHHHHhccccc-------------CCCC------CCCCCChHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCC
28969 Confidence 222333333332210 0000 00123456788999999999999988643210 000122
28970
28971
28972 Q NP_000836.2 432 PRM---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
28973 Q Consensus 432 ~~~---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
28974 ... ...++..+.+.|++..|.|.+| ++.||++|++.. .+.+.+++ ++.++.++.|...
28975 T Consensus 331 ~~~~~~~~~~~~~i~~~l~~~~~~g~~G-~v~f~~~g~~~~~~~~i~~~~----~~~~~~~~~~~~~ 392 (889)
28976 T 6PEQ_D 331 LANPAVPWGQGVEIERALKQVQVEGLSG-NIKFDQNGKRINYTINIMELK----TNGPRKIGYWSEV 392 (889)
28977 T ss_pred CCCCCCCccchHHHHHHHHhcCccCCCc-cEEECCCCcEeeeEEEEEEec----cCCceEEEEEeCC
28978 Confidence 110 1124566778888889999988 899999888754 78888887 2457777878754
28979
28980
28981 No 115
28982 >3UK0_A Extracellular ligand-binding receptor; STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER; HET: ENO, MSE, SO4; 1.49A {Rhodopseudomonas palustris}
28983 Probab=99.38 E-value=3.5e-17 Score=173.93 Aligned_cols=348 Identities=14% Similarity=0.163 Sum_probs=203.7 Template_Neff=12.200
28984
28985 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
28986 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
28987 ...++++||+++|.++... ..+.....+++.+++++| |.++++.+.|+.+++.. ..+.+
28988 T Consensus 3 ~~~~~~~Ig~i~~~~~~~~----------~~~~~~~~~~~~a~~~~~-------g~~~~~~~~~~~~~~~~----~~~~~ 61 (362)
28989 T 3UK0_A 3 AETNEITVGISVTTTGPAA----------ALGIPERNALEFVVKEIS-------GHPIKIIVLDDGGDPTA----ATTNA 61 (362)
28990 T ss_dssp -CCCCEEEEEEECCSSTTH----------HHHHHHHHGGGGSCSEET-------TEEEEEEEEECTTCHHH----HHHHH
28991 T ss_pred ccCCcEEEEEEEecCCCcH----------HhCCCHHHHHHHHHHHhc-------CeEEEEEEEeCCCCHHH----HHHHH
28992 Confidence 3456899999999865321 245677889999999987 34566667776555332 22333
28993
28994
28995 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
28996 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
28997 ++++. .+++++||++.++.....+...+...++|+|........ ....++++++.+++.
28998 T Consensus 62 ~~l~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~---~~~~~~~~~~~~~~~ 120 (362)
28999 T 3UK0_A 62 RRFVT------------------ESKADVIMGSSVTPPSVAISNVANEAQIPHIALAPLPIT---PERAKWSVVMPQPIP 120 (362)
29000 T ss_dssp HHHHH------------------TSCCSEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCC---TTTTTTEEECSCCHH
29001 T ss_pred HHHHH------------------hcCCCEEEecCCChHHHHHHHHHHHcCCCEEEccCCCCC---CcccCceeecCCCHH
29002 Confidence 33332 157889998776655556667778889999987654221 112466788888888
29003
29004
29005 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
29006 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
29007 ..++.+++++.+.+|+++++++.++.++..+.+.+++.+++. ++++.....+. ....+....+++++. .+++++++
29008 T Consensus 121 ~~~~~~~~~l~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ii~ 196 (362)
29009 T 3UK0_A 121 IMGKVLYEHMKKNNVKTVGYIGYSDSYGDLWFNDLKKQGEAM-GLKIVGEERFA--RPDTSVAGQALKLVA-ANPDAILV 196 (362)
29010 T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHCCCCCHHT-TCEEEEEEEEC--TTCSCCHHHHHHHHH-HCCSEEEE
29011 T ss_pred HHHHHHHHHHHHCCCCEEEEEEecCcchHHHHHHHHHHHHHc-CCEEeeEEEeC--CCCCChHHHHHHHHH-cCCCEEEE
29012 Confidence 888889998887899999999966667777888888888765 35544322222 112334455666653 47888867
29013
29014
29015 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA 360 (908)
29016 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (908)
29017 +..+..+..+++++++.|+. ..+++.+.+...... ........+.+........... .............|.
29018 T Consensus 197 ~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~f~ 268 (362)
29019 T 3UK0_A 197 GASGTAAALPQTTLRERGYN--GLIYQTHGAASMDFI-RIAGKSAEGVLMASGPVMDPEG-----QDDTALTKKPGMALV 268 (362)
29020 T ss_dssp ECCHHHHHHHHHHHHHTTCC--SEEEECGGGCSHHHH-HHHGGGGTTCEEEECGGGCSTT-----SCTTCTTHHHHHHHH
29021 T ss_pred eCCHHHchhHHHHHHHcCCc--ceEEEcCcccCHHHH-HHhhhhhcCcEEeecCCCCCCC-----CCchhccCcchHHHH
29022 Confidence 66666677888998888874 355555433221110 0011122333221110000000 000000000111222
29023
29024
29025 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
29026 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
29027 +.|++.++. ..++.++..+||+++++++++++++...... ....++
29028 T Consensus 269 ~~~~~~~~~--------------------------~~~~~~~~~~yda~~~~~~a~~~a~~~~~~~--------~~~~~~ 314 (362)
29029 T 3UK0_A 269 KVYEEKYGP--------------------------SSRSQFAGHSYDAFKVLERVVPVALKKAKPG--------TQEFRE 314 (362)
29030 T ss_dssp HHHHHHHCT--------------------------TCCCHHHHHHHHHHHHHHHHHHHHHTTCCTT--------SHHHHH
29031 T ss_pred HHHHHHHCC--------------------------CCCCcccccchhHHHHHHHHHHHHHHhcCCC--------CHHHHH
29032 Confidence 222221110 0123567789999999999877665432100 112455
29033
29034
29035 Q NP_000836.2 441 ELLGYIRA-VNFNGSAGTPVTFNENGD---APGRYDIFQYQ 477 (908)
29036 Q Consensus 441 ~l~~~l~~-~~f~G~~G~~v~Fd~~G~---~~~~~~i~~~~ 477 (908)
29037 .+.++|++ ..|+|.+| ++.|+++++ +...+.+++++
29038 T Consensus 315 ~l~~~l~~~~~~~g~~g-~i~f~~~~~~~~~~~~~~i~~~~ 354 (362)
29039 T 3UK0_A 315 ALREAFLTEKDIAASQG-VYNFTETDRYGLDDRSRILLTVK 354 (362)
29040 T ss_dssp HHHHHHHHCCCEECSSC-EECCCSSCSSCCCGGGCEEEEEE
29041 T ss_pred HHHHHHHcCCccccccc-eEEeCCCCccccCccceEEEEEE
29042 Confidence 67777775 57899888 899987643 22355666665
29043
29044
29045 No 116
29046 >4TLL_C GluN1/GluN2B; Neurotransmitter receptor, NMDA receptor, GluN1/GluN2B; HET: JEG, QEM, NAG; 3.59A {Xenopus laevis}
29047 Probab=99.38 E-value=3.6e-17 Score=194.78 Aligned_cols=349 Identities=18% Similarity=0.271 Sum_probs=228.5 Template_Neff=11.000
29048
29049 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
29050 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
29051 +++++||+++|.++ ...|++.|++++|+.+ .|.++++...|+.+++.. .+...+.+++
29052 T Consensus 3 ~~~i~IG~i~~~~~------------------~~~~~~~a~~~~n~~g---~g~~i~l~~~d~~~~~~~-~~~~~~~~~~ 60 (823)
29053 T 4TLL_C 3 PKIVNIGAVLSTKK------------------HEQIFREAVNQANFFH---FTRKIQLNATSVTHRPNA-IQMALSVCED 60 (823)
29054 T ss_dssp CEEEEEEEEESSHH------------------HHHHHHHHHHHHHHSS---CTTTEEEEECCEECCSSH-HHHHHHCCCC
29055 T ss_pred CceeeeeEEecCch------------------HHHHHHHHHHHHhhcc---CCCceeccccccCCCCCH-HHHHHHHHHH
29056 Confidence 47899999998752 4578999999999865 267788888887655332 0113333333
29057
29058
29059 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-----IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
29060 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-----~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
29061 +.. +++++++|+.++..+ ..++..+...++|+|++.+..+.+.++..+++++++.+
29062 T Consensus 61 l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~ 121 (823)
29063 T 4TLL_C 61 LIS-------------------SQVYAILVSHPPAPTDHLTPTPISYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVP 121 (823)
29064 T ss_dssp CGG-------------------GCCSCEEECCCSSCCTTCTTHHHHHHHHHTTCCEEESSCCCGGGSCTTTCSSEEESSC
29065 T ss_pred HHh-------------------cCceEEEEcCCCCCCCcCCchHHHHhhccccCCEEEeecCCcccCCCCcccceeecCC
29066 Confidence 332 478999998887776 55666888899999998876665554335788999999
29067
29068
29069 Q NP_000836.2 198 PDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARA 277 (908)
29070 Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v 277 (908)
29071 ++..+++++++++++++|+++++++.+++++....+.+++.+++. ++++.....+. .+..+....++++++ .++|+
29072 T Consensus 122 ~~~~~~~~~~~~~~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ 197 (823)
29073 T 4TLL_C 122 PYSHQALVWFEMMRLFNWNHVILIVSDDHEGRAAQKKLETLLEEK-ESKADKVLQFE--PGTKNLTALLLEAKE-LEARV 197 (823)
29074 T ss_dssp CSGGGHHHHHHHHHHHTCCCCEEEEESSHHHHHHHHHHHHHHTSS-TTCCCEEEEEC--TTCSCCHHHHHHHHH-SSCCE
29075 T ss_pred CHHHHHHHHHHHHHHcCCCEEEEEEecCcchHHHHHHHHHHHHhc-cccccEEeccC--CCCccHHHHHHHHHh-CCceE
29076 Confidence 999999999999988899999999987788888888888888775 45554333232 122345666777763 57899
29077
29078
29079 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRN 356 (908)
29080 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (908)
29081 |++.+.+..+..+++++++.|+.. .+.|++.+.+.... .......+.+.
29082 T Consensus 198 vv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-------------------------- 247 (823)
29083 T 4TLL_C 198 IILSASEDDATAVYKSAAMLDMTGAGYVWLVGEREISGS----ALRYAPDGIIG-------------------------- 247 (823)
29084 T ss_dssp EEEECCHHHHHHHHHHHHHTTTTSTTCEEEECTTTSSTH----HHHSCCTTCEE--------------------------
29085 T ss_pred EEEECCHHHHHHHHHHHHhcCccCCCeEEEEecCCCCch----hhhcCCCceEE--------------------------
29086 Confidence 888877777888999998888753 34455543221110 00000000000
29087
29088
29089 Q NP_000836.2 357 VWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGY-IGLCPRM- 434 (908)
29090 Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~-~~~~~~~- 434 (908)
29091 ... ..+..++..+|||++.++.|+++......... ...|...
29092 T Consensus 248 ---~~~---------------------------------~~~~~~~~~~ydav~~~~~a~~~~~~~~~~~~~~~~~~~~~ 291 (823)
29093 T 4TLL_C 248 ---LQL---------------------------------INGKNESAHISDAVAVVAQAIHELFEMEQITDPPRGCVGNT 291 (823)
29094 T ss_dssp ---EEE---------------------------------TTSSCSHHHHHHHHHHHHHHHHHHTTSSSCCCCCSCSTTCC
29095 T ss_pred ---EEE---------------------------------cCCCCccchHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCC
29096 Confidence 000 00122456789999999999988764321110 0111110
29097
29098
29099 Q NP_000836.2 435 -STIDGKELLGYIRAV-NFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQLH-LKVEDMQWAHR 507 (908)
29100 Q Consensus 435 -~~~~~~~l~~~l~~~-~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~~~-~~~~~i~w~~~ 507 (908)
29101 ...+++.+.+.|++. .|.|.+| .+.||++|++. ..+.+.+++ ++.++.++.|+.... .....+.|+.+
29102 T Consensus 292 ~~~~~~~~l~~~l~~~~~~~G~~G-~i~fd~~g~~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (823)
29103 T 4TLL_C 292 NIWKTGPLFKRVLMSSKYPDGVTG-RIEFNEDGDRKFAQYSIMNLQ----NRKLVQVGIFDGSYIIQNDRKIIWPGG 363 (823)
29104 T ss_dssp SCCTTHHHHHHHHHTCCCTTCTTS-CCEECTTSCEESCCEEEEEEC----SSSEEEEEEECSSSCEECSSCCCCTTS
29105 T ss_pred CccccHHHHHHHHHcCCCCCCccc-cEEECCCCCEEeeEEEEEEcc----CCceEEEEEeeCCceeecCCceeCCCC
29106 Confidence 012345677777754 6889888 89999988874 677788876 357899999986532 12224667653
29107
29108
29109 No 117
29110 >4TLM_C GluN1/GluN2B; neurotransmitter receptor, NMDA receptor, GluN1/GluN2B; HET: NAG, QEM, JEG; 3.77A {Xenopus laevis}
29111 Probab=99.38 E-value=3.6e-17 Score=194.78 Aligned_cols=349 Identities=18% Similarity=0.271 Sum_probs=228.5 Template_Neff=11.000
29112
29113 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
29114 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
29115 +++++||+++|.++ ...|++.|++++|+.+ .|.++++...|+.+++.. .+...+.+++
29116 T Consensus 3 ~~~i~IG~i~~~~~------------------~~~~~~~a~~~~n~~g---~g~~i~l~~~d~~~~~~~-~~~~~~~~~~ 60 (823)
29117 T 4TLM_C 3 PKIVNIGAVLSTKK------------------HEQIFREAVNQANFFH---FTRKIQLNATSVTHRPNA-IQMALSVCED 60 (823)
29118 T ss_dssp CCEEEEEEEESCHH------------------HHHHHHHHHHHHHHTS---CTTTCEEEEEEEECCSSH-HHHHHHCCCC
29119 T ss_pred CceeeeeEEecCch------------------HHHHHHHHHHHHhhcc---CCCceeccccccCCCCCH-HHHHHHHHHH
29120 Confidence 47899999998752 4578999999999865 267788888887655332 0113333333
29121
29122
29123 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-----IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
29124 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-----~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
29125 +.. +++++++|+.++..+ ..++..+...++|+|++.+..+.+.++..+++++++.+
29126 T Consensus 61 l~~-------------------~~v~~vig~~~s~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~ 121 (823)
29127 T 4TLM_C 61 LIS-------------------SQVYAILVSHPPAPTDHLTPTPISYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVP 121 (823)
29128 T ss_dssp CGG-------------------GTCSCEEECCCSSCCSSCTTSHHHHHHHHHTCCEEESSCCCGGGSCTTTCSSEEESSC
29129 T ss_pred HHh-------------------cCceEEEEcCCCCCCCcCCchHHHHhhccccCCEEEeecCCcccCCCCcccceeecCC
29130 Confidence 332 478999998887776 55666888899999998876665554335788999999
29131
29132
29133 Q NP_000836.2 198 PDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARA 277 (908)
29134 Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v 277 (908)
29135 ++..+++++++++++++|+++++++.+++++....+.+++.+++. ++++.....+. .+..+....++++++ .++|+
29136 T Consensus 122 ~~~~~~~~~~~~~~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ 197 (823)
29137 T 4TLM_C 122 PYSHQALVWFEMMRLFNWNHVILIVSDDHEGRAAQKKLETLLEEK-ESKADKVLQFE--PGTKNLTALLLEAKE-LEARV 197 (823)
29138 T ss_dssp CTTTHHHHHHHHHHHHTCCCCEEEEESSHHHHHHHHHHHHHHHHS-SCCCSCEEEEC--TTCSCCHHHHHHHHH-SSCCE
29139 T ss_pred CHHHHHHHHHHHHHHcCCCEEEEEEecCcchHHHHHHHHHHHHhc-cccccEEeccC--CCCccHHHHHHHHHh-CCceE
29140 Confidence 999999999999988899999999987788888888888888775 45554333232 122345666777763 57899
29141
29142
29143 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRN 356 (908)
29144 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (908)
29145 |++.+.+..+..+++++++.|+.. .+.|++.+.+.... .......+.+.
29146 T Consensus 198 vv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-------------------------- 247 (823)
29147 T 4TLM_C 198 IILSASEDDATAVYKSAAMLDMTGAGYVWLVGEREISGS----ALRYAPDGIIG-------------------------- 247 (823)
29148 T ss_dssp EEEECCHHHHHHHHHHHHHTTTTSTTCEEEECHHHHSTH----HHHHCCTTCEE--------------------------
29149 T ss_pred EEEECCHHHHHHHHHHHHhcCccCCCeEEEEecCCCCch----hhhcCCCceEE--------------------------
29150 Confidence 888877777888999998888753 34455543221110 00000000000
29151
29152
29153 Q NP_000836.2 357 VWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGY-IGLCPRM- 434 (908)
29154 Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~-~~~~~~~- 434 (908)
29155 ... ..+..++..+|||++.++.|+++......... ...|...
29156 T Consensus 248 ---~~~---------------------------------~~~~~~~~~~ydav~~~~~a~~~~~~~~~~~~~~~~~~~~~ 291 (823)
29157 T 4TLM_C 248 ---LQL---------------------------------INGKNESAHISDAVAVVAQAIHELFEMEQITDPPRGCVGNT 291 (823)
29158 T ss_dssp ---EEE---------------------------------TTSSCHHHHHHHHHHHHHHHHHHHTTSSCCCCCCSSSTTCC
29159 T ss_pred ---EEE---------------------------------cCCCCccchHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCC
29160 Confidence 000 00122456789999999999988764321110 0111110
29161
29162
29163 Q NP_000836.2 435 -STIDGKELLGYIRAV-NFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQLH-LKVEDMQWAHR 507 (908)
29164 Q Consensus 435 -~~~~~~~l~~~l~~~-~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~~~-~~~~~i~w~~~ 507 (908)
29165 ...+++.+.+.|++. .|.|.+| .+.||++|++. ..+.+.+++ ++.++.++.|+.... .....+.|+.+
29166 T Consensus 292 ~~~~~~~~l~~~l~~~~~~~G~~G-~i~fd~~g~~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (823)
29167 T 4TLM_C 292 NIWKTGPLFKRVLMSSKYPDGVTG-RIEFNEDGDRKFAQYSIMNLQ----NRKLVQVGIFDGSYIIQNDRKIIWPGG 363 (823)
29168 T ss_dssp SCCTHHHHHHHHHHTCCCCCCSSC-CCCBCTTSCBCSCCEEEEECG----GGSCEEEEEEETTEEEECSSCCCCSSS
29169 T ss_pred CccccHHHHHHHHHcCCCCCCccc-cEEECCCCCEEeeEEEEEEcc----CCceEEEEEeeCCceeecCCceeCCCC
29170 Confidence 012345677777754 6889888 89999988874 677788876 357899999986532 12224667653
29171
29172
29173 No 118
29174 >4MPT_B Putative leu/ile/val-binding protein; Structural Genomics, PSI-Biology, Midwest Center; HET: ACY, MSE; 1.75A {Bordetella pertussis Tohama I}
29175 Probab=99.38 E-value=3.6e-17 Score=175.27 Aligned_cols=354 Identities=16% Similarity=0.200 Sum_probs=209.4 Template_Neff=11.900
29176
29177 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVR-ILDTCSRDTYALEQSLTFV 120 (908)
29178 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~-~~d~~~~~~~a~~~~~~~~ 120 (908)
29179 .+++++||+++|.++... ..+.....|++.|++++|+.+++. |+++++. +.|+.+++.. ..+.+
29180 T Consensus 3 ~~~~~~Ig~~~~~~~~~~----------~~~~~~~~~~~~a~~~~n~~~g~~-g~~v~l~~~~d~~~~~~~----~~~~~ 67 (380)
29181 T 4MPT_B 3 AADTIKIGMTSALTGPYN----------EFGEGNRRAVELAVEQWNAKGGIN-GKKIEIAMLLDDQLNPDR----AVQNI 67 (380)
29182 T ss_dssp --CEEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHHHTTTSBT-TBEEEEEEEEECTTCHHH----HHHHH
29183 T ss_pred cCCceEEEEEecCCCCch----------HHhHHHHHHHHHHHHHHHHCCCCC-CeEEEEEEEEcCCCCHHH----HHHHH
29184 Confidence 457899999999875421 245678899999999999876543 6778877 6776655432 33344
29185
29186
29187 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSD------NTRYDFFSR 194 (908)
29188 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~------~~~~~~~~~ 194 (908)
29189 ++++.+ ++++++||+.++.....+...+...++|+|......+.+.. ...++++++
29190 T Consensus 68 ~~l~~~------------------~~~~~vig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (380)
29191 T 4MPT_B 68 RAILDN------------------KDIVGIIGPAGSGPMLAVIDMVQADGRPYMNPIAQTPVVTYPGEKTGEKPRPNVFS 129 (380)
29192 T ss_dssp HHHHTC------------------TTCCCEECCSSHHHHHHHHHHHHHHCSCEEECSCCCGGGTCTTSSTTSSCCTTEEE
29193 T ss_pred HHHHhc------------------CCEEEEECCCCCHHHHHHHHHHHHhCCcEEcccCCCCcccCCCCcCCCCCCCceEE
29194 Confidence 444321 47889999887766667778888899999988766554321 113577899
29195
29196
29197 Q NP_000836.2 195 VVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPN 274 (908)
29198 Q Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (908)
29199 +.+++...+..+++++.+ +|++|++++.++.++..+.+.+++.+++..++++.....+. .+..++...+++++. .+
29200 T Consensus 130 ~~~~~~~~~~~~~~~l~~-~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~-~~ 205 (380)
29201 T 4MPT_B 130 FALQNDIEAVAMGEYLAK-KFKRVGIIHESTAYGVTGVDYLAASIAKNGGAKPVATDSYN--QGAQDMTAQVARMKR-AN 205 (380)
29202 T ss_dssp CSCCHHHHHHHHHHHHHH-HCSSEEEEEESSHHHHHHHHHHHHHHHHTTCCCCSEEEEEC--TTCSCCHHHHHHHHT-TT
29203 T ss_pred EecCchHHHHHHHHHHHh-hCCeEEEEecCChhhhhHHHHHHHHHHHcCCCeeeEEEeec--CCCCchHHHHHHHHH-CC
29204 Confidence 999988888888888876 89999999966667777888888777653224443322222 122345566666663 57
29205
29206
29207 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNR 354 (908)
29208 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (908)
29209 ++++++...+..+..+++++++.|+. ..+++.+.+...... ........+.+...... +.. ...+
29210 T Consensus 206 ~~~i~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~---~~~~ 270 (380)
29211 T 4MPT_B 206 VDAIAAIGLGKDLAVLRRTMARLNVN--VPLAASNGALGQPYQ-EGAGELTLGTLGTMIGA---------FGN---PMRA 270 (380)
29212 T ss_dssp CSEEEEESCHHHHHHHHHHHHHTTCC--CCEEECGGGGSHHHH-HHHGGGGTTCEEEEECT---------TSS---SCCH
29213 T ss_pred CCEEEEEcCchHHHHHHHHHHHcCCC--CCEEEcchhcCHHHH-HHhhHhhCCeeEEeecc---------cCC---CCCh
29214 Confidence 88887776666677888888887764 345554432211100 00011112221111000 000 0001
29215
29216
29217 Q NP_000836.2 355 RNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRM 434 (908)
29218 Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~ 434 (908)
29219 ....|.+.+.+.++...... . .. .........++..+|||+++++++++++..
29220 T Consensus 271 ~~~~f~~~~~~~~~~~~~~~---~----~~-------~~~~~~~~~~~~~~yda~~~~~~a~~~~~~------------- 323 (380)
29221 T 4MPT_B 271 PAADFAKAYKAKYGTDRWWG---N----DP-------ENPQLFMAISVSNGYDAANILFEGIRLANS------------- 323 (380)
29222 T ss_dssp HHHHHHHHHHHHHCSCTTTC---S----CT-------TSCCTTHCCCCCHHHHHHHHHHHHHHHHTS-------------
29223 T ss_pred HHHHHHHHHHHHHCCCccCC---C----CC-------CCchhhhhHHHHHHHHHHHHHHHHHHHcCC-------------
29224 Confidence 11223333332221100000 0 00 000000012367899999999999987642
29225
29226
29227 Q NP_000836.2 435 STIDGKELLGYIRAV-NFNGSAGTPVTFNENGDA---PGRYDIFQYQ 477 (908)
29228 Q Consensus 435 ~~~~~~~l~~~l~~~-~f~G~~G~~v~Fd~~G~~---~~~~~i~~~~ 477 (908)
29229 .++..+.++|++. .|.|.+| ++.|+++|++ ...+.++++.
29230 T Consensus 324 --~~~~~i~~~l~~~~~~~g~~g-~~~f~~~~~~~~~~~~~~v~~~~ 367 (380)
29231 T 4MPT_B 324 --TDPKAVIAAIESIKDYQGVNT-AYTFSKERHHGIETDGVKVFEYV 367 (380)
29232 T ss_dssp --CCHHHHHHHHTTCCSEECSSC-EECCCSSCCBCCCGGGEEEEEEE
29233 T ss_pred --CCHHHHHHHHHcCCCcccccc-eEEeecCcccccccceeEEEEEE
29234 Confidence 1345677788765 7899888 8999986543 2356666665
29235
29236
29237 No 119
29238 >4ZPJ_A Extracellular ligand-binding receptor; ABC transporter, substrate-binding protein, DUF3597; HET: ZN, MSE; 2.24A {Sphaerobacter thermophilus (strain DSM 20745 / S 6022)}
29239 Probab=99.37 E-value=5.1e-17 Score=177.05 Aligned_cols=346 Identities=19% Similarity=0.206 Sum_probs=206.4 Template_Neff=11.500
29240
29241 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
29242 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
29243 .....++++||++.|.++... ..+.....+++.|++++|+. ..|+++++.+.|+.+++.. ..+
29244 T Consensus 48 ~~~~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~n~~---~~g~~~~l~~~d~~~~~~~----~~~ 110 (423)
29245 T 4ZPJ_A 48 SSASGEPIRIGVLLTLSGPQG----------VNGEGNLRGLTLALDQAGMQ---FGGRPVELIIEDSAGQPEQ----AIT 110 (423)
29246 T ss_dssp -----CCEEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHTTTE---ETTEEEEEEEEECTTCHHH----HHH
29247 T ss_pred cccCCCCEEEEEEECCCCCch----------hHhHHHHHHHHHHHHHhccc---cCCEEEEEEEEcCCCCHHH----HHH
29248 Confidence 345677899999999875421 24567889999999999864 2367788888776655332 233
29249
29250
29251 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDN--TRYDFFSRVV 196 (908)
29252 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~--~~~~~~~~~~ 196 (908)
29253 .+++++.+ +++++++++.++.....+...+...+||+|.+....+.+... ..+++++++.
29254 T Consensus 111 ~~~~l~~~------------------~~~~~iig~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~ 172 (423)
29255 T 4ZPJ_A 111 KTRQLIER------------------DRVHLIAGITLSNEAAAVRDILVQAEMPTIVTNAGLQALTRDPAMRSPYLFRVS 172 (423)
29256 T ss_dssp HHHHHHHT------------------SCCSEEEECCCHHHHHHHHHHHHHTTCCEEESSCCCTHHHHSTTTCCTTEEESS
29257 T ss_pred HHHHHHHh------------------cCCcEEEecCCcHHHHHHHHHHHHCCCCEEEccCCcHHHcCCcccCCCceEEee
29258 Confidence 33433321 468888888766555566777888999999987655433211 1256788888
29259
29260
29261 Q NP_000836.2 197 PPDSYQAQAMVDIVT-ALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PN 274 (908)
29262 Q Consensus 197 ~~~~~~~~~~~~~l~-~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 274 (908)
29263 ++....++.+++++. +++|+++++++.++.++..+.+.|++.+++. ++++.....+. ....+....+++++.. .+
29264 T Consensus 173 ~~~~~~~~~~~~~l~~~~~~~~i~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~ 249 (423)
29265 T 4ZPJ_A 173 FANGQYDAPAADYAYETLGYRRMVLHAADYAAGHEEMAAFRSRFEQA-GGEIVDEVVAP--IGTQDFGPYLQRIEQAAAE 249 (423)
29266 T ss_dssp CCTTTTTHHHHHHHHHTTCCCEEEEEEESSHHHHHHHHHHHHHHHHT-TCEEEEEEEEC--TTCSCCHHHHHHHHHHGGG
29267 T ss_pred cCcccchHHHHHHHHHHhCCCEEEEEEeCcHHHHHHHHHHHHHHHHc-CCEEceEEecC--CCCCChHHHHHHHHHHHcC
29268 Confidence 888888888888884 4589999999866667777788888888775 35544322222 1123344556666521 26
29269
29270
29271 Q NP_000836.2 275 ARAVIMFA-NEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANN 353 (908)
29272 Q Consensus 275 ~~viv~~~-~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (908)
29273 +++|++.. .+..+..+++++++.|+..++.+++.+.+...... ........+.+...... . ....
29274 T Consensus 250 ~~~ii~~~~~~~~~~~~~~~~~~~g~~~~~~ii~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~---~~~~ 315 (423)
29275 T 4ZPJ_A 250 ADAVFAFHGTSTDAIRFLVQYQEFGLKDSIPLIPSGADVDQSIL-PEIGDAALGLVSGTLYT----------A---YNDT 315 (423)
29276 T ss_dssp CSEEEEECCSSHHHHHHHHHHHHTTCTTTSCEEECGGGGCTTTH-HHHGGGGTTCEEEESCC----------T---TCCS
29277 T ss_pred CCEEEEEcCChHHHHHHHHHHHHcCCCCCCcEecCCcccChhHH-HHHHHhhcceeEeeccc----------c---CCCC
29278 Confidence 78887664 35567788888888887533455555433221100 00111122222111100 0 0001
29279
29280
29281 Q NP_000836.2 354 RRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPR 433 (908)
29282 Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~ 433 (908)
29283 +....|.+.|++.+.. ..+..++..+||+++++++|+++....
29284 T Consensus 316 ~~~~~f~~~~~~~~~~--------------------------~~~~~~~~~~yda~~~l~~al~~~~~~----------- 358 (423)
29285 T 4ZPJ_A 316 PESQEFVEAFTARHEG--------------------------ILPGLVDYAGYIGGRVIAEALTAIDGE----------- 358 (423)
29286 T ss_dssp HHHHHHHHHHHHHTTT--------------------------CCCCHHHHHHHHHHHHHHHHHHHTTTC-----------
29287 T ss_pred HHHHHHHHHHHHHhCC--------------------------CCCChhhHHHHHHHHHHHHHHHHcCCC-----------
29288 Confidence 1112232222222110 012345678999999999999886431
29289
29290
29291 Q NP_000836.2 434 MSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQY 476 (908)
29292 Q Consensus 434 ~~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~ 476 (908)
29293 ..+++.+.+.|++..|.|.+| ++.|+++|++. ..+.++++
29294 T Consensus 359 --~~~~~~l~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~~~~~ 399 (423)
29295 T 4ZPJ_A 359 --VENKEALLEALKAVEFTGPAG-NFRFHPESQGPVTTILLCRV 399 (423)
29296 T ss_dssp --TTCHHHHHHHHHHCEEEETTE-EEEECTTTCSEEEEEEEEEE
29297 T ss_pred --CCCHHHHHHHHHcCCcccCCe-eEEECCCCCCceeeEEEEEE
29298 Confidence 124556778888888999988 89999887653 33444433
29299
29300
29301 No 120
29302 >6DLZ_B Glutamate receptor 2,Voltage-dependent calcium channel; Ion channel, TRANSPORT PROTEIN; HET: GLU, CYZ; 3.9A {Rattus norvegicus}
29303 Probab=99.37 E-value=5.2e-17 Score=198.52 Aligned_cols=356 Identities=15% Similarity=0.186 Sum_probs=226.0 Template_Neff=11.100
29304
29305 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTC-SRDTYALEQSLTFVQA 122 (908)
29306 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~-~~~~~a~~~~~~~~~~ 122 (908)
29307 ++++||+++|.++. ....|++.|++++|++ |+++++...|+. +++.. +.+.+++
29308 T Consensus 1 ~~i~IG~~~~~~~~----------------~~~~g~~~A~~~iN~~-----g~~i~l~~~d~~~~~~~~----a~~~~~~ 55 (1031)
29309 T 6DLZ_B 1 NSIQIGGLFPRGAD----------------QEYSAFRVGMVQFSTS-----EFRLTPHIDNLEVANSFA----VTNAFCS 55 (1031)
29310 T ss_dssp CCEEEEEEECTTCH----------------HHHHHHHHHHHHSCCS-----SCCEEEEEEECCSSCHHH----HHHHHHH
29311 T ss_pred CceeeeeeeCCCCh----------------HHHHHHHHHHHHhhcC-----CceeccceEecCCCCHHH----HHHHHHH
29312 Confidence 36899999998642 4678999999999985 477888888876 44322 2233333
29313
29314
29315 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
29316 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
29317 ++. +++++++|+.++....+++..+...++|++++..++. ..+++++++.|+.
29318 T Consensus 56 l~~-------------------~~v~aviG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~-----~~~~~~~~~~~~~--- 108 (1031)
29319 T 6DLZ_B 56 QFS-------------------RGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTD-----GTHPFVIQMRPDL--- 108 (1031)
29320 T ss_dssp HHH-------------------HTCSCEEECCCTTTHHHHHHHHHHHCCCEEECSSCCS-----SCCTTEEECSCCC---
29321 T ss_pred HHh-------------------cCeeEEEecCChHHHHHHHHHHhccCCcEEEcCCCCC-----CCCCeEEEeeccH---
29322 Confidence 332 5799999998887777888889999999998875433 2478899998873
29323
29324
29325 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPR--EPRPGEFEKIIKRLLETPNARAVIM 280 (908)
29326 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
29327 +.++++++++++|+++++++ +++++....+.+.+.+++. ++++.....+.. +.+..++.+.++++++ .++|+|++
29328 T Consensus 109 ~~~~~~~l~~~~~~~v~ii~-~~~~g~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~d~~~~~~~i~~-~~~~~vv~ 185 (1031)
29329 T 6DLZ_B 109 KGALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK-KWQVTAINVGNINNDKKDETYRSLFQDLEL-KKERRVIL 185 (1031)
29330 T ss_dssp HHHHHHHHHHHTCSEEEEEE-CGGGCSHHHHHHHHHHHHT-TCEEEEEECTTCCSTTTTTHHHHHHHHHTT-TTCCEEEE
29331 T ss_pred HHHHHHHHHHhCCCEEEEEE-eCcchHHHHHHHHHHHhhc-CCeEEEEEecCCCCCCCcchhHHHHHHHcc-cCceEEEE
29332 Confidence 67778888888999999999 6678887788888877765 455543332210 0123456677777764 57899988
29333
29334
29335 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
29336 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
29337 ......+..+++++++.|+.. .+.|+..+........ ........+....... ....+....+
29338 T Consensus 186 ~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~~f 249 (1031)
29339 T 6DLZ_B 186 DCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDL-LKIQFGGAEVSGFQIV---------------DYDDSLVSKF 249 (1031)
29340 T ss_dssp ECCHHHHHHHHHHHHHHTCCSTTCEEEECSSBTTTSCC-SSSSSSSCEEEEEESC---------------CTTSHHHHHH
29341 T ss_pred ECCHHHHHHHHHHHHHhCCccCCcEEEEEeCCCCcCcH-HHhccCCceEEEEEEe---------------eCCcHHHHHH
29342 Confidence 877777888999999988854 3566665422211100 0000111111111000 0001112223
29343
29344
29345 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP----GYIGLCPRM- 434 (908)
29346 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~----~~~~~~~~~- 434 (908)
29347 .+.+++.++..... . ....++.++..+||+++++++|++++...... .....|...
29348 T Consensus 250 ~~~~~~~~~~~~~~-------------~------~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 310 (1031)
29349 T 6DLZ_B 250 IERWSTLEEKEYPG-------------A------HTATIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANP 310 (1031)
29350 T ss_dssp HHHHHTSCTTTSTT-------------C------SSSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSCCCCTTCTT
29351 T ss_pred HHHHHhcccccCCC-------------C------CcCCCcHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCccCC
29352 Confidence 33333322210000 0 00123456788999999999999998653210 000112110
29353
29354
29355 Q NP_000836.2 435 --STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
29356 Q Consensus 435 --~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
29357 ...+++.+.++|++..|.|..| ++.|+++|++.. .+.+++++ ++.+..+|.|+..
29358 T Consensus 311 ~~~~~~~~~l~~~l~~~~~~g~~G-~~~f~~~g~~~~~~~~i~~~~----~~~~~~~~~~~~~ 368 (1031)
29359 T 6DLZ_B 311 AVPWGQGVEIERALKQVQVEGLSG-NIKFDQNGKRINYTINIMELK----TNGPRKIGYWSEV 368 (1031)
29360 T ss_dssp CCCCTHHHHHHHHHTTCCCEETTE-ECEECSSSCEESCEEEEEEEC----SSCEEEEEEEESS
29361 T ss_pred CCCcccHHHHHHHHHhcCccCCCc-cEEeCCCCcEEeeEEEEEEec----cCCcEEEEEEeCC
29362 Confidence 1224667888888888999888 899999888764 78888887 3568888888754
29363
29364
29365 No 121
29366 >3EAF_A ABC transporter, substrate binding protein; 11229a2, PSI2, NYSGXRC, ABC transporter; 2.0A {Aeropyrum pernix}
29367 Probab=99.36 E-value=6.6e-17 Score=173.99 Aligned_cols=362 Identities=14% Similarity=0.105 Sum_probs=213.9 Template_Neff=11.800
29368
29369 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLL-SNI--TLGVRILDTCSRDTYALEQSLTF 119 (908)
29370 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il-~g~--~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
29371 .++++||+++|.++.. ...+.....|++.|++++|..++++ +|+ ++++.+.|+.+++. ...+.
29372 T Consensus 2 ~~~~~Ig~i~~~~~~~----------~~~~~~~~~g~~~a~~~~n~~g~~~~~g~~~~v~~~~~d~~~~~~----~~~~~ 67 (391)
29373 T 3EAF_A 2 SLTINVGLLVDETGPT----------SDVGKGYSLGAELAFKYFNEKGIYTKDGVRVNINYIKRDYAYNPT----TAEEY 67 (391)
29374 T ss_dssp CEEEEEEEEECSSSTT----------HHHHHHHHHHHHHHHHHHHHHCEECTTCCEEEEEEEEEECTTCHH----HHHHH
29375 T ss_pred CCeEEEEEEecCCCCc----------chhchhhHHHHHHHHHHHHhcCceeeCCceeEEEEEEecCCCCHH----HHHHH
29376 Confidence 4578999999976532 1356678899999999999765432 344 56666677655432 22333
29377
29378
29379 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
29380 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
29381 +++++. +.++++||++ ++.....+...+...++|+|.+....+.+ .+++++++.+++
29382 T Consensus 68 ~~~l~~------------------~~~v~~ii~~-~~~~~~~~~~~~~~~~ip~i~~~~~~~~~----~~~~~~~~~~~~ 124 (391)
29383 T 3EAF_A 68 YREFRD------------------RYGVIAIIGW-GTADTEKLSDQVDTDKITYISASYSAKLL----VKPFNFYPAPDY 124 (391)
29384 T ss_dssp HHCCCC------------------CTCCSEEEEC-CHHHHHHHHHHHHHHTCEEEESCCCGGGT----TSTTEECSSCCH
29385 T ss_pred HHHHHH------------------hcCceEEEec-ccHHHHHHHHHHHHcCCeEEEcCcchhhc----CCCceeecCCCH
29386 Confidence 333332 1478999986 55555566677888999999987654322 246778888888
29387
29388
29389 Q NP_000836.2 200 SYQAQAMVDIV-TALGWNYVSTLAS-EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARA 277 (908)
29390 Q Consensus 200 ~~~~~~~~~~l-~~~~~~~v~ii~~-~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v 277 (908)
29391 ...+..+++++ ++++|+++++++. ++.++..+.+.|++.+++. ++++.....+.......+....+++++. .++++
29392 T Consensus 125 ~~~~~~~~~~l~~~~~~~~i~ii~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 202 (391)
29393 T 3EAF_A 125 STQACSGLAFLASEFGQGKLALAYDSKVAYSRSPIGAIKKAAPSL-GLQVVGDYDLPLRATEADAERIAREMLA-ADPDY 202 (391)
29394 T ss_dssp HHHHHHHHHHHHHHHCSEEEEEEECTTCHHHHTTHHHHHHHTGGG-TEEEEEEEECCTTCCHHHHHHHHHHHHT-TCCSE
29395 T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEcCCCccccCHHHHHHHHHHHc-CCEEEEeeecCCCCCcccHHHHHHHHHH-cCCCE
29396 Confidence 88888888887 5679999999985 5566777788888887765 3554332111110112334555666653 47888
29397
29398
29399 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTI-LPKRASIDGFDRYFRSRTLANNRRN 356 (908)
29400 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (908)
29401 +++...+..+..+++++++.|+. .+|+..+ |...............+.+.. ... .........+..
29402 T Consensus 203 vi~~~~~~~~~~~~~~~~~~g~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 269 (391)
29403 T 3EAF_A 203 VWCGNTISSCSLLGRAMAKVGLD--AFLLTNV-WGFDERSPQLIGEGGYGKVFGISPF----------IYPMFGQDVEGI 269 (391)
29404 T ss_dssp EEECSCHHHHHHHHHHHHHHTCC--CEEEECG-GGCSTTHHHHHCGGGTTSEEEEESB----------CCGGGCTTCHHH
29405 T ss_pred EEECCCHHHHHHHHHHHHHcCCC--cEEEecc-ccCCccchHHhccccccceeeeecc----------ccccCCcCCHHH
29406 Confidence 87765666777889999888874 3455443 221110000001111221110 000 000000001111
29407
29408
29409 Q NP_000836.2 357 VWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMST 436 (908)
29410 Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~ 436 (908)
29411 ..|.+.+++ +... ...+..++..+||+++++++|++++..... ..
29412 T Consensus 270 ~~f~~~~~~-~~~~------------------------~~~~~~~~~~~yda~~~~~~al~~~~~~~~----------~~ 314 (391)
29413 T 3EAF_A 270 QTIFEAARM-NGVS------------------------EDQINLRVVQGFVNVWLLIKAIESVTSQDL----------QE 314 (391)
29414 T ss_dssp HHHHHHHHH-TTCC------------------------GGGCCHHHHHHHHHHHHHHHHHTTSCHHHH----------HH
29415 T ss_pred HHHHHHHHH-cCCC------------------------cccCChhHHHHHHHHHHHHHHHHHhccccc----------cc
29416 Confidence 122222222 1100 011235677899999999999998753210 01
29417
29418
29419 Q NP_000836.2 437 IDGKELLGYIRAVNFN--GSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
29420 Q Consensus 437 ~~~~~l~~~l~~~~f~--G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
29421 .+++.+.++|++..|. |.+|+++.|+++|++. ..+.+.+++. ++.++.++.|...
29422 T Consensus 315 ~~~~~l~~~l~~~~~~~~G~~g~~i~f~~~~~~~~~~~~i~~~~~---~~~~~~v~~~~~~ 372 (391)
29423 T 3EAF_A 315 RGGEALKEALEANTFDLGGITADTIDYEPGFHLAYRKVFIIKLGE---NGELQLMGKFEAP 372 (391)
29424 T ss_dssp HTHHHHHHHHHHCCBCSTTCBSSCBCCBTTBCCCCCCEEEEEECT---TSSEEEEEEECCC
29425 T ss_pred cChHHHHHHHHhCCCCCCCccccceEecCCCccccceEEEEEECC---CCeEEeCcceeCc
29426 Confidence 2456778888877787 7765469999877653 4566666652 2467888888754
29427
29428
29429 No 122
29430 >5UOW_C N-methyl-D-aspartate receptor subunit NR1-8a, N-methyl-D-aspartate; membrane protein; HET: NAG, GLU, BMK; 4.5A {Xenopus laevis}
29431 Probab=99.36 E-value=6.8e-17 Score=192.22 Aligned_cols=336 Identities=18% Similarity=0.285 Sum_probs=221.7 Template_Neff=11.300
29432
29433 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
29434 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
29435 +++++||+++|.+ ....|++.|++++|+++ .+.++++.+.|+..++.. ...+.+.+++
29436 T Consensus 2 ~~~i~Ig~~~p~~------------------~~~~~~~~a~~~~n~~g---~~~~i~l~~~d~~~~~~~-~~~~~~~~~~ 59 (814)
29437 T 5UOW_C 2 PKIVNIGAVLSTK------------------KHEQIFREAVNQANKRH---FTRKIQLNATSVTHRPNA-IQMALSVCED 59 (814)
29438 T ss_dssp CSCEEEEEEESCH------------------HHHHHHHHHHHHHHHHS---CTTTCCEEEEEEECCSSH-HHHHHCCCCC
29439 T ss_pred CCccceEEEecCc------------------hHHHHHHHHHHHHHHhc---cCCCeeeeceeecCCCCH-HHHHHHHHHH
29440 Confidence 4678999999865 24578999999999865 246677777776544322 1112333333
29441
29442
29443 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-----IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
29444 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-----~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
29445 +.. +++++++|+.++..+ ..++..+...++|++++.+..+.+.+...+++++++.+
29446 T Consensus 60 l~~-------------------~~v~~iig~~~~~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~l~~~~~~~~~~~~~~ 120 (814)
29447 T 5UOW_C 60 LIS-------------------SQVYAILVSHPPAPTDHLTPTPISYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVP 120 (814)
29448 T ss_dssp TTT-------------------TCCSCEEECCCSSCCSSCTTSHHHHHHHHHTCCEEESSCCCGGGCCTTTCSSEEESSC
29449 T ss_pred HHh-------------------cCceEEEEcCCCCCCCCCCCchhHHhhhhcCCCEEEccCCCccccCCccCchhhcCCC
29450 Confidence 322 478899998877766 56667888899999998876665544335788999999
29451
29452
29453 Q NP_000836.2 198 PDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARA 277 (908)
29454 Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v 277 (908)
29455 ++...++++++++++++|+++++++.+++++....+.+++.+++. ++++.....+. .+..++...++++++ .++|+
29456 T Consensus 121 ~~~~~~~~~~~~~~~~~~~~i~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~l~~-~~~~~ 196 (814)
29457 T 5UOW_C 121 PYSHQALVWFEMMRLFNWNHVILIVSDDHEGRAAQKKLETLLEEK-ESKADKVLQFE--PGTKNLTALLLEAKE-LEARV 196 (814)
29458 T ss_dssp CTTTHHHHHHHHHHHHTCCCCEEEEESSHHHHHHHHHHHHHHHHS-SCCCSCEEEEC--SSCSCCHHHHHHHHH-SSCCE
29459 T ss_pred CHHHHHHHHHHHHHHcCCcEEEEEEecCcchHHHHHHHHHHHHhc-ccccceeeccC--CCCccHHHHHHHHHh-cCCeE
29460 Confidence 999999999999988899999999987788888888888888775 45554333232 223456667777763 57899
29461
29462
29463 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRN 356 (908)
29464 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (908)
29465 |++.+.......+++++++.|+.. .+.|++.+.+.... .......+.+..
29466 T Consensus 197 vv~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------------------------- 247 (814)
29467 T 5UOW_C 197 IILSASEDDATAVYKSAAMLDMTGAGYVWLVGEREISGS----ALRYAPDGIIGL------------------------- 247 (814)
29468 T ss_dssp EEEECCHHHHHHHHHHHHHTTTTSTTCEEEECHHHHSTH----HHHTCCTTCEEE-------------------------
29469 T ss_pred EEEeCCHHHHHHHHHHHHhcCCCCCCeEEEEecCCCCCc----hhhcCCCceEEE-------------------------
29470 Confidence 888877777788899988888753 34555543221110 000000000000
29471
29472
29473 Q NP_000836.2 357 VWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGY-IGLCPRM- 434 (908)
29474 Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~-~~~~~~~- 434 (908)
29475 . . ..+..++..+|||++++++++++.....+... ...|...
29476 T Consensus 248 ----~----~-----------------------------~~~~~~~~~~yda~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 290 (814)
29477 T 5UOW_C 248 ----Q----L-----------------------------INGKNESAHISDAVAVVAQAIHELFEMEQITDPPRGCVGNT 290 (814)
29478 T ss_dssp ----E----E-----------------------------SSSSCHHHHHHHHHHHHHHHHHHHTTSCCCCCCCSSSTTCC
29479 T ss_pred ----E----e-----------------------------cCCCcchhHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCC
29480 Confidence 0 0 00123456789999999999998765422110 0112111
29481
29482
29483 Q NP_000836.2 435 -STIDGKELLGYIRAV-NFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
29484 Q Consensus 435 -~~~~~~~l~~~l~~~-~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
29485 ...++..+.+.+++. .|+|.+| ++.||++|++. ..+.+.+++ ++.+..+|.|+..
29486 T Consensus 291 ~~~~~~~~l~~~l~~~~~~~G~~g-~~~fd~~g~~~~~~~~i~~~~----~~~~~~v~~~~~~ 348 (814)
29487 T 5UOW_C 291 NIWKTGPLFKRVLMSSKYPDGVTG-RIEFNEDGDRKFAQYSIMNLQ----NRKLVQVGIFDGS 348 (814)
29488 T ss_dssp SCCSSSHHHHHHHHTCCCCCCSSC-CCCBCTTSCBCCCCEEEEECC----TTSCEEEEEECSS
29489 T ss_pred ccccchHHHHHHHHhcCCCCCccc-ceEECCCCceeeeEEEEEEcc----CCceEEEEEEeCC
29490 Confidence 012445677777754 6788888 89999999875 678888886 3578999999864
29491
29492
29493 No 123
29494 >3LOP_A Substrate binding periplasmic protein; Substrate-binding, Protein Structure Initiative II(PSI; HET: EDO; 1.55A {Ralstonia solanacearum}
29495 Probab=99.36 E-value=7.1e-17 Score=171.86 Aligned_cols=352 Identities=11% Similarity=0.091 Sum_probs=207.6 Template_Neff=11.800
29496
29497 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
29498 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
29499 .++++||+++|.++... ..+.....+++.|++++|+++++. |+++++...|+.+++. ...+.+++
29500 T Consensus 3 ~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~n~~g~~~-g~~v~~~~~d~~~~~~----~~~~~~~~ 67 (364)
29501 T 3LOP_A 3 LADISVIQSLPLSGSQA----------VTGRALNAGARLYFDWLNLNGGIN-GETIRLVARDDEQKIE----QTVRNVRD 67 (364)
29502 T ss_dssp --CEEEEEEECSSSTTH----------HHHHHHHHHHHHHHHHHHHTTTBT-TBCEEEEEEECTTCHH----HHHHHHHH
29503 T ss_pred cccEEEEEecCCCCCch----------HHhHHHHHHHHHHHHHHHHcCCcC-CEEEEEEEecCCCCHH----HHHHHHHH
29504 Confidence 46789999999865321 245678899999999999876543 6778887777655532 22333333
29505
29506
29507 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVA--NILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
29508 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va--~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
29509 ++. ..++++++++.++....... ..+...++|+|.++...+.+. ..++++++.++..
29510 T Consensus 68 l~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~---~~~~~~~~~~~~~ 126 (364)
29511 T 3LOP_A 68 MAR------------------VDNPVALLTVVGTANVEALMREGVLAEARLPLVGPATGASSMT---TDPLVFPIKASYQ 126 (364)
29512 T ss_dssp HHH------------------HSCEEEEECCCCHHHHHHHHHTTHHHHHTCCEESCSCCCGGGG---SCTTEECCSCCHH
29513 T ss_pred HHh------------------hcCceEEEEecCCHHHHHHHhhhhHHhcCCCEEeccCCCcccC---CCCceEEccCCHH
29514 Confidence 332 14788888876655444443 567788999998876554332 1467788888888
29515
29516
29517 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
29518 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
29519 ..++.+++++.+.+|++|++++.++.++..+.+.+++.+++. ++++.....+. ....+....+++++. .++++|++
29520 T Consensus 127 ~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ii~ 202 (364)
29521 T 3LOP_A 127 QEIDKMITALVTIGVTRIGVLYQEDALGKEAITGVERTLKAH-ALAITAMASYP--RNTANVGPAVDKLLA-ADVQAIFL 202 (364)
29522 T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETTHHHHHHHHHHHHHHHTT-TCCCSEEEEEC--TTSCCCHHHHHHHHH-SCCSEEEE
29523 T ss_pred HHHHHHHHHHHHhCCCEEEEEEecCchhHHHHHHHHHHHHHC-CCceeEEeeeC--CCCCChHHHHHHHHh-CCCCEEEE
29524 Confidence 888889998877899999999966667777888888888775 35544322221 122344555666653 47888777
29525
29526
29527 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQE-EIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
29528 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
29529 ...+..+..+++++++.|+. ..+++.+.+...... .... ....+....... ........+....|
29530 T Consensus 203 ~~~~~~~~~~~~~~~~~g~~--~~ii~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~f 268 (364)
29531 T 3LOP_A 203 GATAEPAAQFVRQYRARGGE--AQLLGLSSIDPGILQ-KVAGLDAVRGYSLALVM-----------PNPGKSVNPVIREF 268 (364)
29532 T ss_dssp ESCHHHHHHHHHHHHHTTCC--CEEEECTTSCHHHHH-HHHCHHHHTTCEEEECS-----------CCTTCTTSHHHHHH
29533 T ss_pred ECCHHHHHHHHHHHHHCCCC--ceEEEecCCChHHHH-HHhCccccccEEEEEEe-----------cCCCcCCCHHHHHH
29534 Confidence 76566677888888887773 456665543321110 0000 011221110000 00000001111223
29535
29536
29537 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDG 439 (908)
29538 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~ 439 (908)
29539 .+.+++.+.. ...++.++..+||++++++.|+++.... .++
29540 T Consensus 269 ~~~~~~~~~~-------------------------~~~~~~~~~~~yda~~~~~~a~~~~~~~--------------~~~ 309 (364)
29541 T 3LOP_A 269 NRARAAVGAK-------------------------DVDLSFRAVEGFVAAKVLAEAIRRAGPK--------------PTR 309 (364)
29542 T ss_dssp HHHHHHHTCT-------------------------TCCCCHHHHHHHHHHHHHHHHHHHHCSS--------------CCH
29543 T ss_pred HHHHHHhCCC-------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCC--------------CCH
29544 Confidence 3222221110 0112345778999999999999886421 234
29545
29546
29547 Q NP_000836.2 440 KELLGYIRAV-NFNGS-AGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWT 492 (908)
29548 Q Consensus 440 ~~l~~~l~~~-~f~G~-~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~ 492 (908)
29549 +.+.++|++. .|... .+ ++.|++++++. ..+.+++++ .+.++.++.|+
29550 T Consensus 310 ~~~~~~l~~~~~~~~~g~~-~~~f~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 360 (364)
29551 T 3LOP_A 310 EQVRHALTELRDYDVGGGF-TVDFTDRSRPGSHYIELGVVG----PNGLVIQEGHH 360 (364)
29552 T ss_dssp HHHHHHHHTCEEEESSTTC-EEECSSTTSCSCCCCEEEEEC----TTSCEEEC---
29553 T ss_pred HHHHHHHHhCCCCcCCCCe-eeecCCCCCcccCeEEEEEEC----CCceEeecCCC
29554 Confidence 5677777664 46421 23 68888766543 456666666 24566677665
29555
29556
29557 No 124
29558 >5IOV_B GluN1, GLY-GLY-GLU-GLU; ligand-gated ion channel, synaptic transmission; HET: QEM, GLU, GLY; 7.5A {Xenopus laevis}
29559 Probab=99.35 E-value=7.4e-17 Score=192.20 Aligned_cols=341 Identities=15% Similarity=0.193 Sum_probs=215.4 Template_Neff=11.300
29560
29561 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPD--LLSNITLGVRILDTCSRDTYALEQS 116 (908)
29562 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~--il~g~~l~~~~~d~~~~~~~a~~~~ 116 (908)
29563 .....++++||+++|.++ . ++|++++|++++ .+++..+.+.+.|+.+++..+.+
29564 T Consensus 23 ~~~~~~~i~Ig~~~~~~g-------------~---------~~A~~~iN~~~g~~~~~~~~~~~~~~d~~~~~~~~~~-- 78 (825)
29565 T 5IOV_B 23 YAQKHPNMDIAVILVGTT-------------E---------EVAIKDVHEKDDFHHLPVTPRVELVTMQESDPKSIIT-- 78 (825)
29566 T ss_pred HHhhCCCCcEEEEEecCc-------------e---------eeeecccccCCCcccCCCCceeeEecCCCCCHHHHHH--
29567 Confidence 356678999999999763 1 889999998876 44454455555666655443333
29568
29569
29570 Q NP_000836.2 117 LTFVQALIEKDASDVKCANGDPPIFTKPDKISGVI-GAAASS--VSIMVANILRLFKIPQISYASTAPE-LSDNTRYDFF 192 (908)
29571 Q Consensus 117 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vI-g~~~s~--~~~~va~~~~~~~iP~Is~~~~~~~-l~~~~~~~~~ 192 (908)
29572 .+++++. .+++++++ |+.++. .+..++..+...++|+|++.+..+. +++...++++
29573 T Consensus 79 --~~~~l~~------------------~~~v~avi~G~~~s~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~ 138 (825)
29574 T 5IOV_B 79 --RICDLMS------------------DKKVQGVVFGDDTDQEAIAQILDFISVQTLTPILGIHGGSSMIMADKEEASMF 138 (825)
29575 T ss_pred --HHHHhcc------------------cCCcEEEEEcCCCChHHHHHHHHHHHHhhCCCEEEecCCCccccccccCCeeE
29576 Confidence 3333332 14788876 987765 4456667777899999996544332 2222357889
29577
29578
29579 Q NP_000836.2 193 SRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREP-RPGEFEKIIKRLLE 271 (908)
29580 Q Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~-~~~~~~~~~~~l~~ 271 (908)
29581 +++.|++...+.++++++.+++|+++++++.+++++....+.+++.+++. +.++.....+..+. ...+....++++++
29582 T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (825)
29583 T 5IOV_B 139 FQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFENKVRSTIENS-FVGWELEEVIHLDMSLDDIDSKIQNQLKK 217 (825)
29584 T ss_pred EEcCCCHHHHHHHHHHHHHHcCCeEEEEEEEcCCCchhHHHHHHHHHHhc-cCceEEEEEEEccCChhhHHHHHHHHHHh
29585 Confidence 99999998889999999988899999999987778888888888877764 34443222221100 12234455555653
29586
29587
29588 Q NP_000836.2 272 TPNARAVIMFANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTL 350 (908)
29589 Q Consensus 272 ~~~~~viv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 350 (908)
29590 .++|+|++.+....+..+++++++.|+.. ++.|+..+.+...... .......+..
29591 T Consensus 218 -~~~~~iv~~~~~~~~~~~l~~~~~~g~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~--------------------- 273 (825)
29592 T 5IOV_B 218 -LQSPVILLYCTKEEATYIFEVAHSVGLTGYGFTWIVPSLVAGDTDT--VPDEFPTGLI--------------------- 273 (825)
29593 T ss_pred -cCCCEEEEECCHHHHHHHHHHHHHcCCCCCCeEEEeeecCCCCCCC--CCCcCCCCeE---------------------
29594 Confidence 47899888777777888999998888753 3456654432211000 0000000000
29595
29596
29597 Q NP_000836.2 351 ANNRRNVWFAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPG--YI 428 (908)
29598 Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~--~~ 428 (908)
29599 .. .+. ..+..++..+|||++++++|++++....+.. ..
29600 T Consensus 274 --------~~-----~~~---------------------------~~~~~~~~~~yDav~~~a~al~~~~~~~~~~~~~~ 313 (825)
29601 T 5IOV_B 274 --------SV-----SYD---------------------------EWDYDLPARVRDGIAIITTAASTMLSEHNSIPQSK 313 (825)
29602 T ss_pred --------EE-----Eee---------------------------cCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCCCC
29603 Confidence 00 000 0012346789999999999999986542110 00
29604
29605
29606 Q NP_000836.2 429 GLCPRM---STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
29607 Q Consensus 429 ~~~~~~---~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~-~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
29608 ..|... ...++..+.+.|++.+|.| | ++.|+++|++. ..+.+++++. ++.+..+|.|...
29609 T Consensus 314 ~~~~~~~~~~~~~~~~l~~~l~~~~f~G--G-~~~f~~~g~~~~~~~~i~~~~~---~~~~~~~~~~~~~ 377 (825)
29610 T 5IOV_B 314 SSCNNIQESRVYEAHMLKRYLINVTFEG--R-DLSFSEDGYQMHPKLVIILLNQ---ERKWERVGKYKDR 377 (825)
29611 T ss_pred cccccCCcchhHhHHHHHHHHhcccccC--c-ceeeCCCCccceeeEEEEEeCC---CCceEEEEEEeCC
29612 Confidence 122211 1124567888888889988 7 89999999884 5778888863 2568888888654
29613
29614
29615 No 125
29616 >5WEO_A Glutamate receptor 2,Voltage-dependent calcium channel; Ion channel, TRANSPORT PROTEIN; HET: CYZ, GLU;{Rattus norvegicus}
29617 Probab=99.33 E-value=1.3e-16 Score=194.97 Aligned_cols=356 Identities=15% Similarity=0.187 Sum_probs=224.0 Template_Neff=11.100
29618
29619 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTC-SRDTYALEQSLTFVQA 122 (908)
29620 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~-~~~~~a~~~~~~~~~~ 122 (908)
29621 ++++||+++|.++. ....|++.|++++|++ |+++++...|+. +++.. +.+.+++
29622 T Consensus 1 ~~i~Ig~~~~~sg~----------------~~~~~~~~a~~~iN~~-----g~~l~~~~~d~~~~~~~~----a~~~~~~ 55 (1034)
29623 T 5WEO_A 1 NSIQIGGLFPRGAD----------------QEYSAFRVGMVQFSTS-----EFRLTPHIDNLEVANSFA----VTNAFCS 55 (1034)
29624 T ss_dssp CEEEEEEEECTTCH----------------HHHHHHHHHHHHHCCS-----SSEEEEEEEECCSSCHHH----HHHHHHH
29625 T ss_pred CceeeeeeecCCCh----------------HHHHHHHHHHHhhhcC-----CceeeeeeEecCCCCHHH----HHHHHHH
29626 Confidence 36899999998752 5678999999999985 477888888876 44332 2233333
29627
29628
29629 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
29630 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
29631 +++ +++++++|+.++....+++..+.+.++|++++...++ ..+++++++.|+.
29632 T Consensus 56 l~~-------------------~~v~~viG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~-----~~~~~~~~~~~~~--- 108 (1034)
29633 T 5WEO_A 56 QFS-------------------RGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTD-----GTHPFVIQMRPDL--- 108 (1034)
29634 T ss_dssp HHH-------------------HTCSEEEECCCTTTHHHHHHHHHHHCCCEEECSSCCS-----SCCTTEEECCCCC---
29635 T ss_pred HHH-------------------cCeeEEEecCChHHHHHHHHHHcccCCeEEeCCCCCC-----CCCCeEEEecCch---
29636 Confidence 332 5789999998887777888888899999998875433 2468899998873
29637
29638
29639 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPR--EPRPGEFEKIIKRLLETPNARAVIM 280 (908)
29640 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
29641 +.++++++++++|+++++++ +++++....+.+.+.+++. ++++.....+.. +.+..++.+.++++++ .++|+|++
29642 T Consensus 109 ~~~~~~~l~~~~~~~v~iv~-~~~~g~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~d~~~~~~~i~~-~~~~~vv~ 185 (1034)
29643 T 5WEO_A 109 KGALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK-KWQVTAINVGNINNDKKDETYRSLFQDLEL-KKERRVIL 185 (1034)
29644 T ss_dssp HHHHHHHHHHHTCSEEEEEE-CGGGCSHHHHHHHHHHHHT-TCEEEEEECTTSCGGGTTHHHHHHHHHHTT-TTCCEEEE
29645 T ss_pred HHHHHHHHHHhCCCEEEEEE-eCCchHHHHHHHHHHHhhc-CCeEEEEEecCCCCCCCccchHHHHHHHhh-cCCcEEEE
29646 Confidence 56777888788999999999 6677777777788777764 455543322210 0122456677777764 57899988
29647
29648
29649 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQSG-HFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWF 359 (908)
29650 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (908)
29651 ......+..+++++++.|+.. .+.|++.+.+...... ........+....... ....+....+
29652 T Consensus 186 ~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~~f 249 (1034)
29653 T 5WEO_A 186 DCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDL-LKIQFGGAEVSGFQIV---------------DYDDSLVSKF 249 (1034)
29654 T ss_dssp ESCHHHHHHHHHHHHHHTTTSTTCEEEECSSBTTSSCC-STTTTSSSEEEEEESS---------------CTTSHHHHHH
29655 T ss_pred eCCHHHHHHHHHHHHHhCCCcCCeEEEEEeCCCCCCch-HhcccCCceEEEEEEe---------------eCCcHHHHHH
29656 Confidence 877777888999999988854 3556665422211100 0000001111111000 0011122223
29657
29658
29659 Q NP_000836.2 360 AEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCP----GYIGLCPRM- 434 (908)
29660 Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~----~~~~~~~~~- 434 (908)
29661 .+.+++.++..... . ....++.++..+|||++++++|++++...... .....|...
29662 T Consensus 250 ~~~~~~~~~~~~~~---------~----------~~~~~~~~~~~~yda~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 310 (1034)
29663 T 5WEO_A 250 IERWSTLEEKEYPG---------A----------HTATIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANP 310 (1034)
29664 T ss_dssp HHHHHTSCTTTSTT---------C----------SSSSCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSCCCCTTCTT
29665 T ss_pred HHHHHhcccccCCC---------c----------CCCCCchHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCCccCC
29666 Confidence 33333332210000 0 00123456788999999999999998643210 000112110
29667
29668
29669 Q NP_000836.2 435 --STIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPG-RYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
29670 Q Consensus 435 --~~~~~~~l~~~l~~~~f~G~~G~~v~Fd~~G~~~~-~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
29671 ...+++.+.+++++..|.|..| ++.|+++|++.. .+.+.+++ ++.+..+|.|...
29672 T Consensus 311 ~~~~~~~~~l~~~l~~~~~~g~~G-~~~f~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~ 368 (1034)
29673 T 5WEO_A 311 AVPWGQGVEIERALKQVQVEGLSG-NIKFDQNGKRINYTINIMELK----TNGPRKIGYWSEV 368 (1034)
29674 T ss_dssp CCCCTHHHHHHHHHTTCCCEETTE-ECEECTTSCEESCEEEEEEEC----SSSEEEEEEEESS
29675 T ss_pred CCCcccHHHHHHHHHhcCcCCCCC-ceEeCCCCcEEeeEEEEEEec----cCCceEEEEEeCC
29676 Confidence 1224667888888888999888 899998888754 67888887 3567888888753
29677
29678
29679 No 126
29680 >4DQD_A Extracellular ligand-binding receptor; structural genomics, PSI-Biology, protein structure; HET: PPY, PG4, GOL; 1.601A {Rhodopseudomonas palustris}
29681 Probab=99.31 E-value=1.9e-16 Score=168.26 Aligned_cols=348 Identities=14% Similarity=0.130 Sum_probs=203.5 Template_Neff=12.200
29682
29683 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
29684 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
29685 +++++||+++|.++... ..+.....+++.+++++| |.++++.+.|+..++.. ..+.+++
29686 T Consensus 2 ~~~~~Ig~~~~~~~~~~----------~~~~~~~~g~~~a~~~~~-------g~~~~~~~~~~~~~~~~----~~~~~~~ 60 (363)
29687 T 4DQD_A 2 NAEIKIGITMSASGPGA----------ALGQPQSKTVAALPKEIG-------GEKVTYFALDDESDPTK----AAQNARK 60 (363)
29688 T ss_dssp -CCEEEEEEECCSSTTH----------HHHHHHHHHGGGSCSEET-------TEEEEEEEEECTTCHHH----HHHHHHH
29689 T ss_pred CcceEEEEEEcCCCCch----------hcChhhHHHHHHchHhhC-------CEEEEEEEEcCCCCHHH----HHHHHHH
29690 Confidence 35789999999865321 245667888888888875 35577777776555332 2233333
29691
29692
29693 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELS-DNTRYDFFSRVVPPDSY 201 (908)
29694 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~-~~~~~~~~~~~~~~~~~ 201 (908)
29695 ++. .++++++|++.++.....+...+...++|+|......+.+. .....++++++.++...
29696 T Consensus 61 l~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (363)
29697 T 4DQD_A 61 LLS------------------EEKVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDI 122 (363)
29698 T ss_dssp HHH------------------TSCCSEEECCSSHHHHHHHHHHHHHTTCCEEECCCCGGGTCSCCTTGGGEEECSCCHHH
29699 T ss_pred HHh------------------hcCCCEEEecCCchhHHHHHHHHHHcCCCEEEccCccccccCcccccCceeEecCCHHH
29700 Confidence 332 14789999877665555666777888999998876554322 11134677888898888
29701
29702
29703 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
29704 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
29705 .++.+++++.+.+|+++++++.++.++..+.+.+++.+++. ++++.....+. ....+....+++++. .++|++++.
29706 T Consensus 123 ~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~i~~~ 198 (363)
29707 T 4DQD_A 123 MAEAIGKYIAKTGAKKVGYIGFSDAYGEGYYKVLAAAAPKL-GFELTTHEVYA--RSDASVTGQVLKIIA-TKPDAVFIA 198 (363)
29708 T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHH-TCEECCCEEEC--TTCSCCHHHHHHHHH-TCCSEEEEE
29709 T ss_pred HHHHHHHHHHHhCCCeEEEEEecCcchHHHHHHHHHHHHHc-CcEEeeeeeeC--CCCCccHHHHHHHHh-hCCCEEEEe
29710 Confidence 88899999877799999999966667778888888888775 35544322222 112334555666653 578888877
29711
29712
29713 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTL-ANNRRNVWFA 360 (908)
29714 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 360 (908)
29715 .....+..+++++++.|+. .+|++.+.+...... ........+.+..... +......... ...+....|.
29716 T Consensus 199 ~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~f~ 269 (363)
29717 T 4DQD_A 199 SAGTPAVLPQKALRERGFK--GAIYQTHGVATEEFI-KLGGKDVEGAIFAGEA------FSGAEDMPADSPFRKVKARFV 269 (363)
29718 T ss_dssp CCSGGGHHHHHHHHHTTCC--SEEECCGGGCSHHHH-HHHGGGGTTCEEEECH------HHHGGGSCTTCHHHHHHHHHH
29719 T ss_pred cCCccchHHHHHHHHcCCC--ceEEecccccCHHHH-HhhcccccccEEeccc------ccCCCCCCCCCchhHHHHHHH
29720 Confidence 6555577888888888874 355555433322110 0001112232211100 0000000000 0000111122
29721
29722
29723 Q NP_000836.2 361 EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGK 440 (908)
29724 Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~ 440 (908)
29725 +.+++.++ ...++.++..+||++++++.+++++....... ...++.
29726 T Consensus 270 ~~~~~~~~--------------------------~~~~~~~~~~~yda~~~~~~a~~~~~~~~~~~--------~~~~~~ 315 (363)
29727 T 4DQD_A 270 DAYKAANG--------------------------GAAPTIFGVHLWDSMTLVENAIPAALKAAKPG--------TPEFRA 315 (363)
29728 T ss_dssp HHHHHHTT--------------------------TCCCCTHHHHHHHHHHHHHHHHHHHHHHCCTT--------SHHHHH
29729 T ss_pred HHHHHHcC--------------------------CCCCCCccccHHHHHHHHHHHHHHHHHhcCCC--------CHHHHH
29730 Confidence 22221110 01234567889999999999998875431100 112455
29731
29732
29733 Q NP_000836.2 441 ELLGYIRAV-NFNGSAGTPVTFNENG---DAPGRYDIFQYQ 477 (908)
29734 Q Consensus 441 ~l~~~l~~~-~f~G~~G~~v~Fd~~G---~~~~~~~i~~~~ 477 (908)
29735 .+.+.|++. .|.|.+| .+.|+..+ .+...+.+++++
29736 T Consensus 316 ~l~~~l~~~~~~~g~~g-~~~~~~~~~~~~~~~~~~i~~~~ 355 (363)
29737 T 4DQD_A 316 AIRDQIEKSKDLALNNG-LSNMTPDNHNGYDERSAFLIEIR 355 (363)
29738 T ss_dssp HHHHHHTTCCSEEETTE-EECCCSSCSSCCCGGGCEEEEEE
29739 T ss_pred HHHHHHHhcccccccCC-ccccCCCCCCCCCccceEEEEEE
29740 Confidence 677888876 7888877 89997542 222356666665
29741
29742
29743 No 127
29744 >3SG0_A Extracellular ligand-binding receptor; structural genomics, PSI-Biology, protein structure; HET: 173, MSE; 1.201A {Rhodopseudomonas palustris}
29745 Probab=99.28 E-value=3.9e-16 Score=167.41 Aligned_cols=350 Identities=14% Similarity=0.122 Sum_probs=203.1 Template_Neff=12.100
29746
29747 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
29748 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
29749 ...++++||+++|.++... ..+.....+++.+++++| |+++++.+.|+.+++. ...+.+
29750 T Consensus 23 ~~~~~~~Ig~i~~~~~~~~----------~~~~~~~~g~~~a~~~~~-------g~~~~~~~~~~~~~~~----~~~~~~ 81 (386)
29751 T 3SG0_A 23 AAQAEIKIGITMSASGPGA----------ALGQPQSKTVAALPKEIG-------GEKVTYFALDDESDPT----KAAQNA 81 (386)
29752 T ss_dssp --CCCEEEEEEECCSSTTH----------HHHHHHHHHGGGSCSEET-------TEEEEEEEEECTTCHH----HHHHHH
29753 T ss_pred ccCCceEEEEEEcCCCCcc----------ccchhHHHHHHHcchhhC-------CEEEEEEEEcCCCCHH----HHHHHH
29754 Confidence 4567899999999875321 245567788888888765 3456666667654432 223333
29755
29756
29757 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELS-DNTRYDFFSRVVPPD 199 (908)
29758 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~-~~~~~~~~~~~~~~~ 199 (908)
29759 ++++. .++++++|++.++.....+...+...++|+|.+....+.+. .....++++++.+++
29760 T Consensus 82 ~~~~~------------------~~~~~~ii~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (386)
29761 T 3SG0_A 82 RKLLS------------------EEKVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPND 143 (386)
29762 T ss_dssp HHHHH------------------TSCCSEEECCSSHHHHHHHHHHHHHTTCCEEECCCCGGGTCSCCTTGGGEEECSCCH
29763 T ss_pred HHHHh------------------cCCCCEEEccCCchhHHHHHHHHHHcCCCEEEcCCcccccCCcccccCceeEecCCH
29764 Confidence 43332 14788999877665555666777888999998876554322 111346788888888
29765
29766
29767 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
29768 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
29769 ...++.+++++.+.+|++|++++.++.++..+.+.+++.+++. ++++.....+. ....+....+++++. .++|+++
29770 T Consensus 144 ~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ii 219 (386)
29771 T 3SG0_A 144 DIMAEAIGKYIAKTGAKKVGYIGFSDAYGEGYYKVLAAAAPKL-GFELTTHEVYA--RSDASVTGQVLKIIA-TKPDAVF 219 (386)
29772 T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHH-TCEECCCEEEC--TTCSCCHHHHHHHHH-TCCSEEE
29773 T ss_pred HHHHHHHHHHHHHhCCCEEEEEeecCccchhHHHHHHHHHHHc-CCEEeeeEeeC--CCCCChHHHHHHHHh-hCCCEEE
29774 Confidence 8888899999877799999999966667778888888888775 35543322221 122345556666663 4788887
29775
29776
29777 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTL-ANNRRNVW 358 (908)
29778 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 358 (908)
29779 +......+..+++++++.|+. ..|++.+.+...... ........+.+..... +......... ...+....
29780 T Consensus 220 ~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 290 (386)
29781 T 3SG0_A 220 IASAGTPAVLPQKALRERGFK--GAIYQTHGVATEEFI-KLGGKDVEGAIFAGEA------FSGAEDMPADSPFRKVKAR 290 (386)
29782 T ss_dssp EECCSGGGHHHHHHHHHTTCC--SEEECCGGGCSHHHH-HHHGGGGTTCEEEECH------HHHGGGSCTTCHHHHHHHH
29783 T ss_pred EecCCccchHHHHHHHHcCCC--ceEEeccccCCHHHH-HhhccccCccEEeecc------cCCCCCCCCCCchhHHHHH
29784 Confidence 776555577888888888874 355555433221110 0001112222211100 0000000000 00001111
29785
29786
29787 Q NP_000836.2 359 FAEFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTID 438 (908)
29788 Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~ 438 (908)
29789 |.+.+.+.+. ...+..++..+||++++++++++++...... ....+
29790 T Consensus 291 f~~~~~~~~~--------------------------~~~~~~~~~~~yda~~~~~~a~~~~~~~~~~--------~~~~~ 336 (386)
29791 T 3SG0_A 291 FVDAYKAANG--------------------------GAAPTIFGVHLWDSMTLVENAIPAALKAAKP--------GTPEF 336 (386)
29792 T ss_dssp HHHHHHHHTT--------------------------TCCCCHHHHHHHHHHHHHHHHHHHHHHHCCT--------TSHHH
29793 T ss_pred HHHHHHHHhC--------------------------CCCCCCcchhHHHHHHHHHHHHHHHHHhcCC--------CCHHH
29794 Confidence 2221211110 0113356788999999999999887542110 01124
29795
29796
29797 Q NP_000836.2 439 GKELLGYIRAV-NFNGSAGTPVTFNENG---DAPGRYDIFQYQ 477 (908)
29798 Q Consensus 439 ~~~l~~~l~~~-~f~G~~G~~v~Fd~~G---~~~~~~~i~~~~ 477 (908)
29799 ++.+.++|++. .|.|.+| .+.|+..+ .+...+.+.+++
29800 T Consensus 337 ~~~l~~~l~~~~~~~g~~g-~~~~~~~~~~~~~~~~~~v~~~~ 378 (386)
29801 T 3SG0_A 337 RAAIRDQIEKSKDLALNNG-LSNMTPDNHNGYDERSAFLIEIR 378 (386)
29802 T ss_dssp HHHHHHHHTTCCSEEETTE-EECCCSSCSSCCCGGGCEEEEEE
29803 T ss_pred HHHHHHHHHhCcCccCCCC-ccccCCCCCCCccccceEEEEEe
29804 Confidence 56677888876 7888877 89997542 222355666665
29805
29806
29807 No 128
29808 >5ERE_A Extracellular ligand-binding receptor; Solute Binding Protein, Tandem PAS; HET: MSE; 2.0A {Desulfohalobium retbaense DSM 5692}
29809 Probab=99.27 E-value=4.6e-16 Score=176.57 Aligned_cols=327 Identities=15% Similarity=0.220 Sum_probs=209.8 Template_Neff=12.000
29810
29811 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
29812 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
29813 .++||+++|.++... ..+.....|++.|++++| .++++.+.|+++++..+. +.+++++
29814 T Consensus 1 ~i~ig~~~p~~g~~~----------~~~~~~~~g~~~a~~~~g--------~~v~~~~~d~~~~~~~~~----~~~~~l~ 58 (568)
29815 T 5ERE_A 1 KPVVGVILPFSSAFE----------DIAVEQQRAVELALAESG--------SAFEIVFKDGGADVDTAV----QAFQDLV 58 (568)
29816 T ss_dssp CCEEEEEECCSSTTH----------HHHHHHHHHHHHHHHHHT--------CSSEEEEEECCSSHHHHH----HHHHHHH
29817 T ss_pred CCEEEEEeCCCCCcH----------HHHHHHHHHHHHHHHHcC--------CcEEEEEEcCCCCHHHHH----HHHHHHH
29818 Confidence 378999999987531 356778899999999874 457778888877654332 3333333
29819
29820
29821 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
29822 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
29823 .+ +++++++++ .++..+..++..+...++|+|.+.+..+.+.+ .++++++.++....+.
29824 T Consensus 59 ~~-----------------~~~~~~i~~-~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 117 (568)
29825 T 5ERE_A 59 RS-----------------QENLAAVVS-CSSWASSAIHPLAAEKDIFHVAIGSAALKRTE---PGHTIRLTVGVQQEQE 117 (568)
29826 T ss_dssp HH-----------------CTTEEEEEE-ESHHHHHHHHHHHHHTTCEEEEESCTTCCCCS---TTCCEECSCCHHHHHH
29827 T ss_pred hc-----------------CCCcEEEEe-CCcHHHHhHHHHHHhCCCEEEEecCCCccccC---CCCeEEccCChHHHHH
29828 Confidence 21 025666665 56666667778888999999998776554432 3778999998888888
29829
29830
29831 Q NP_000836.2 205 AMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFANE 284 (908)
29832 Q Consensus 205 ~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~~~ 284 (908)
29833 ++++++. +|+++++++.++.++....+.+++.++.. +.....+. .+..++...+++++. .++|+|++.+ .
29834 T Consensus 118 ~~~~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~v~~~~-~ 187 (568)
29835 T 5ERE_A 118 QLAAYLT--DFERIAVLAMDNNLGSSWIRMLEDRFPKQ----VVAAQEYN--PQQMDIAAQLATIKA-RDSEALVLIS-A 187 (568)
29836 T ss_dssp HHHHHHT--TCSSEEEEEESSHHHHHHHHHHHHHCTTT----EEEEEEEC--TTTCCCHHHHHHHHT-TTCSEEEEEC-S
29837 T ss_pred HHHHHHc--CCCEEEEEEecChhHHHHHHHHHHHcCCc----eeEEeeeC--ccCCCHHHHHHHHHh-CCCCEEEEEc-h
29838 Confidence 8888886 89999999977777777777776665431 11112222 123356666777763 5788887776 4
29839
29840
29841 Q NP_000836.2 285 DDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAEFWE 364 (908)
29842 Q Consensus 285 ~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (908)
29843 ..+..+++++++.|+. +.|++.+.+...... .......+.+...+ . .+....|.+.++
29844 T Consensus 188 ~~~~~~l~~~~~~g~~--~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~-----------------~-~~~~~~~~~~~~ 245 (568)
29845 T 5ERE_A 188 GEAATIAKQARQAGIK--AQLVGTRPIQRAEVL--AASAFTNGLVYTYP-----------------S-YNQDHPFMSAFT 245 (568)
29846 T ss_dssp TTHHHHHHHHHHTTCC--CEEEECGGGCCHHHH--HTHHHHTTCEEEEE-----------------C-CCTTSHHHHHHH
29847 T ss_pred HHHHHHHHHHHHCCCC--CEEEeCChhcCHHHH--HhhhhcCeeEEEcC-----------------C-CcCCcHHHHHHH
29848 Confidence 5677888888888773 456665433221110 00111122111100 0 001111222222
29849
29850
29851 Q NP_000836.2 365 ENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKELLG 444 (908)
29852 Q Consensus 365 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 444 (908)
29853 +.++ ..++.++..+|||++++++|+++... +++.+.+
29854 T Consensus 246 ~~~~---------------------------~~~~~~~~~~yda~~~~~~al~~~~~----------------~~~~~~~ 282 (568)
29855 T 5ERE_A 246 DRYG---------------------------LEPGFFGVEAYDLCTTLSRALEQGRQ----------------TPKALFE 282 (568)
29856 T ss_dssp HHHS---------------------------SCCCHHHHHHHHHHHHHHHHHHTTCC----------------SHHHHHH
29857 T ss_pred HHHC---------------------------CCCChHHHHHHHHHHHHHHHHHhcCC----------------CHHHHHH
29858 Confidence 2221 11235678899999999999987531 3446777
29859
29860
29861 Q NP_000836.2 445 YIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQ 494 (908)
29862 Q Consensus 445 ~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~~ 494 (908)
29863 +|++..|.|.+| ++.|+++|++...+.+.+++ ++.++.++.|...
29864 T Consensus 283 ~l~~~~~~g~~g-~~~~~~~g~~~~~~~i~~~~----~~~~~~~~~~~~~ 327 (568)
29865 T 5ERE_A 283 WYAGNTFTGALG-KVTFANDGDASYPYIFKKVT----ESGFRVAEFQFPM 327 (568)
29866 T ss_dssp HHTTCEEEETTE-EEEECTTSBEECCEEEEEEE----TTEEEECTTHHHH
29867 T ss_pred HHhcCCcccccE-EEEECCCCCccccEEEEEEE----CCeEEEEEEEcch
29868 Confidence 888888999988 89999888887778888887 3578889988764
29869
29870
29871 No 129
29872 >3CKM_A Uncharacterized protein HI1655; YraM, periplasmic-binding protein, lipoprotein, unliganded; 1.35A {Haemophilus influenzae} SCOP: c.93.1.1
29873 Probab=99.17 E-value=3.7e-15 Score=155.57 Aligned_cols=322 Identities=12% Similarity=0.097 Sum_probs=193.4 Template_Neff=11.900
29874
29875 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
29876 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
29877 ++++||+++|.++... ..+.....|++.|++ |+++++.+.|+.++ . ..+.++++
29878 T Consensus 1 ~~i~ig~~~p~~~~~~----------~~~~~~~~g~~~a~~----------g~~i~~~~~d~~~~--~----~~~~~~~l 54 (327)
29879 T 3CKM_A 1 MVSQIGLLLPLSGDGQ----------ILGTTIQSGFNDAKG----------NSTIPVQVFDTSMN--S----VQDIIAQA 54 (327)
29880 T ss_pred CCeEEEEEecCCCCCh----------hHhHHHHHHHHHHHc----------CeeEEEEEEcCCcH--H----HHHHHHHH
29881 Confidence 3689999999876421 245677788888875 34577777776553 1 22333333
29882
29883
29884 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANI-LRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
29885 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~-~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
29886 .. ++++++||+.++.....+... +...++|+|.+.+..+. ...++.+++.+++...
29887 T Consensus 55 ~~-------------------~~v~~iig~~~~~~~~~~~~~~~~~~~ip~i~~~~~~~~----~~~~~~~~~~~~~~~~ 111 (327)
29888 T 3CKM_A 55 KQ-------------------AGIKTLVGPLLKQNLDVILADPAQIQGMDVLALNATPNS----RAIPQLCYYGLSPEDE 111 (327)
29889 T ss_pred HH-------------------cCCCEEEcCCCcHHHHhHHHHHHHHhCCCEEeCCCCCcc----cCCCCEEEecCCHHHH
29890 Confidence 32 478899998777666666665 78889999988765432 1246678888888888
29891
29892
29893 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFA 282 (908)
29894 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~ 282 (908)
29895 ++.+++++.+.+|+++++++.++.++....+.+++.+++. ++++.....+. . ..++...++++. .++|+|++..
29896 T Consensus 112 ~~~~~~~l~~~~~~~v~vv~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~-~~~~~~~~~~~~--~~~~~v~~~~ 185 (327)
29897 T 3CKM_A 112 AESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVRWQQL-AGTDANIRYYN--L-PADVTYFVQENN--SNTTALYAVA 185 (327)
29898 T ss_pred HHHHHHHHHHcCCCEEEEEEcCCHHHHHHHHHHHHHHHHc-CCeEeEEeecC--C-CCCcHHHHHHHh--cCCCEEEEeC
29899 Confidence 8888998877899999999977778888888888888775 35554332222 1 124445555553 4789888777
29900
29901
29902 Q NP_000836.2 283 NEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAP-VYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAE 361 (908)
29903 Q Consensus 283 ~~~~~~~~l~~~~~~g~~~~~~~i~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (908)
29904 ....+..+++++++.+. +..+++.+.|...... .........+.+.... .+.. . ...+...+
29905 T Consensus 186 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~----~--~~~~~~~~ 248 (327)
29906 T 3CKM_A 186 SPTELAEMKGYLTNIVP--NLAIYASSRASASATNTNTDFIAQMNGVQFSDI---------PFFK----D--TNSPQYQK 248 (327)
29907 T ss_pred CHHHHHHHHHHHHHcCC--CCCEEeccCcCChhhhcHHhhhhhhccEEEEec---------CCCC----C--CCCHHHHH
29908 Confidence 65556777777776544 3456655433321110 0000111222221110 0000 0 00011111
29909
29910
29911 Q NP_000836.2 362 FWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKE 441 (908)
29912 Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~yDAv~~la~Al~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (908)
29913 +.+.+... ..++.++..+||+++++++. +.
29914 T Consensus 249 -f~~~~~~~-------------------------~~~~~~~~~~yda~~~~~~~-~~----------------------- 278 (327)
29915 T 3CKM_A 249 -LAKSTGGE-------------------------YQLMRLYAMGADAWLLINQF-NE----------------------- 278 (327)
29916 T ss_pred -HHHHhCCC-------------------------CCCCHHHHHHHHHHHHHHHH-HH-----------------------
29917 Confidence 11111110 01234577899999998872 11
29918
29919
29920 Q NP_000836.2 442 LLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTN 493 (908)
29921 Q Consensus 442 l~~~l~~~~f~G~~G~~v~Fd~~G~~~~~~~i~~~~~~~~~~~~~~Vg~~~~ 493 (908)
29922 .+.+++..|.|.+| ++.|+++|++...+.+.+++ ++.+..++.|..
29923 T Consensus 279 -l~~~~~~~~~g~~g-~~~f~~~g~~~~~~~v~~~~----~g~~~~~~~~~~ 324 (327)
29924 T 3CKM_A 279 -LRQVPGYRLSGLTG-ILSADTNCNVERDMTWYQYQ----DGAIVPVVDHHH 324 (327)
29925 T ss_pred -HHHhcCCcccccce-eEEeCCCCCccCCEEEEEEE----CCEEEECCCccc
29926 Confidence 12233456888888 89999888776677777776 356777777654
29927
29928
29929 No 130
29930 >5VBG_A Penicillin-binding protein activator LpoA; Gram-negative bacteria, Outer membrane lipoprotein; HET: MSE; 2.8A {Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)}
29931 Probab=98.94 E-value=1.6e-13 Score=154.27 Aligned_cols=215 Identities=12% Similarity=0.095 Sum_probs=144.9 Template_Neff=11.300
29932
29933 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
29934 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
29935 ....++++||+++|.++... ..+.....|++.|++ |.++++.+.|+.++. ....
29936 T Consensus 219 ~~~~~~i~Ig~~~p~sg~~~----------~~~~~~~~g~~~a~~----------g~~i~~~~~d~~~~~------~~~~ 272 (543)
29937 T 5VBG_A 219 FQQTNVSQIGLLLPLSGDGQ----------ILGTTIQSGFNDAKG----------NSTIPVQVFDTSMNS------VQDI 272 (543)
29938 T ss_dssp CCCCCCCCEEEEECCSSTTH----------HHHHHHHHHHHHHHT----------TCCCCEEEEETTTSC------HHHH
29939 T ss_pred hccCCCcEEEEEecCCCCch----------HHHHHHHHHHHHHcc----------CCCCCEEEEeCCCCC------HHHH
29940 Confidence 45678899999999987531 345677788888873 345777777876542 1222
29941
29942
29943 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVAN-ILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
29944 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~-~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
29945 ++++.. +++++|||+.++.....++. ++...+||+|++.+..+. ..+++.+++.++
29946 T Consensus 273 ~~~l~~-------------------~~v~~iig~~~s~~~~~~~~~~~~~~~ip~i~~~~~~~~----~~~~~~~~~~~~ 329 (543)
29947 T 5VBG_A 273 IAQAKQ-------------------AGIKTLVGPLLKQNLDVILADPAQIQGMDVLALNATPNS----RAIPQLCYYGLS 329 (543)
29948 T ss_dssp HHHHHH-------------------TTCCEEECCCSHHHHHHHHHCGGGGTTCEEEESCCCTTC----CCCTTEEECCCC
29949 T ss_pred HHHHHH-------------------CCCCEEECCCCHHHHHHHHcCchhhcCCeEEEecCCCCc----ccCCCceEeeCC
29950 Confidence 233222 57899999877766655544 467899999988765543 124677888888
29951
29952
29953 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
29954 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
29955 ....+..+++++.+.+|++|++++.++.++....+.+++.+++. ++++.....+. . ..++...++++. .++|+|
29956 T Consensus 330 ~~~~~~~~~~~~~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~-~~d~~~~~~~~~--~~~d~i 403 (543)
29957 T 5VBG_A 330 PEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVRWQQL-AGTDANIRYYN--L-PADVTYFVQENN--SNTTAL 403 (543)
29958 T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHH-HSSCCEEEEES--S-TTHHHHHHHHHC--CTTEEE
29959 T ss_pred hHHHHHHHHHHHHHcCCCCcEEEcCCCHHHHHHHHHHHHHHHHh-hCCcCeeEEeC--C-ccchhHhhhccc--CCCCEE
29960 Confidence 88888888998887899999999977778877888888877765 45554332222 1 234445555553 378888
29961
29962
29963 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSGHFLWIGSDSW 311 (908)
29964 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~ 311 (908)
29965 ++.+.+..+..+++++++.+. ++.|++.+.|
29966 T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 434 (543)
29967 T 5VBG_A 404 YAVASPTELAEMKGYLTNIVP--NLAIYASSRA 434 (543)
29968 T ss_dssp EECCCHHHHHHHHHHTTTTCT--TCEEEECGGG
29969 T ss_pred EEecCHHHHHHHHHHHhhccC--CCcEEEcchh
29970 Confidence 777666667777777776443 3456655433
29971
29972
29973 No 131
29974 >5KCN_A Penicillin-binding protein activator LpoA; Outer membrane lipoprotein, PBP1A, transpeptidase.; 1.965A {Haemophilus influenzae}
29975 Probab=98.94 E-value=1.6e-13 Score=154.22 Aligned_cols=215 Identities=12% Similarity=0.095 Sum_probs=144.4 Template_Neff=11.200
29976
29977 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
29978 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
29979 ....++++||+++|.++... ..+.....|++.|++ |.++++.+.|+.++. ....
29980 T Consensus 219 ~~~~~~i~Ig~~~p~sg~~~----------~~~~~~~~g~~~a~~----------g~~i~~~~~d~~~~~------~~~~ 272 (543)
29981 T 5KCN_A 219 FQQTNVSQIGLLLPLSGDGQ----------ILGTTIQSGFNDAKG----------NSTIPVQVFDTSMNS------VQDI 272 (543)
29982 T ss_pred ccCCCCeEEEEEEeCCCCCh----------HHHHHHHHHHHHHHC----------CeeEEEEEEcCCCCH------HHHH
29983 Confidence 45678899999999986531 345677888888873 345777777776542 1222
29984
29985
29986 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVAN-ILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
29987 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~-~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
29988 ++++.. ++++++||+.++.....++. ++...+||+|++.+..+. ...++.+++.++
29989 T Consensus 273 ~~~l~~-------------------~~v~~iig~~~s~~~~~~~~~~~~~~~ip~i~~~~~~~~----~~~~~~~~~~~~ 329 (543)
29990 T 5KCN_A 273 IAQAKQ-------------------AGIKTLVGPLLKQNLDVILADPAQIQGMDVLALNATPNS----RAIPQLCYYGLS 329 (543)
29991 T ss_pred HHHHHh-------------------CCCCEEECCCChHHHHHHHHHHHHHhCCCEEeCCCCCcc----cCCCCeeEecCC
29992 Confidence 233222 57899999887766655544 468899999988765542 124677888888
29993
29994
29995 Q NP_000836.2 199 DSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
29996 Q Consensus 199 ~~~~~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
29997 ....+..+++++.+.+|+++++++.++.++....+.+++.+++. ++++.....+. . ..++...++++. .++|+|
29998 T Consensus 330 ~~~~~~~~~~~~~~~~~~~v~il~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~--~-~~~~~~~~~~~~--~~~d~i 403 (543)
29999 T 5KCN_A 330 PEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVRWQQL-AGTDANIRYYN--L-PADVTYFVQENN--SNTTAL 403 (543)
30000 T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHHHHc-CCeEeEEEeCC--C-CCCcHHHHHHhh--cCCCEE
30001 Confidence 88888888988888899999999977778887888888877765 45554332232 1 224444555553 378888
30002
30003
30004 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSGHFLWIGSDSW 311 (908)
30005 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~~~ 311 (908)
30006 ++.+.+.....+++++++.+. ++.|++.+.|
30007 T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 434 (543)
30008 T 5KCN_A 404 YAVASPTELAEMKGYLTNIVP--NLAIYASSRA 434 (543)
30009 T ss_pred EEcCCHHHHHHHHHHHHHhCC--CCCEEecccc
30010 Confidence 777666566777777775443 3455655433
30011
30012
30013 No 132
30014 >4PYR_A Putative branched-chain amino acid ABC; Structural Genomics, PSI-Biology, Midwest Center; HET: GSH; 1.45A {Chromobacterium violaceum}
30015 Probab=98.94 E-value=1.7e-13 Score=141.16 Aligned_cols=204 Identities=12% Similarity=0.096 Sum_probs=132.6 Template_Neff=11.700
30016
30017 Q NP_000836.2 45 DIILGGLFPVH-AKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
30018 Q Consensus 45 ~i~Ig~l~p~~-~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
30019 +++||++.|.+ +... ..+....+|+++|+++ | .++++.+.|+++ .. ..+.++++
30020 T Consensus 1 ~i~ig~~~~~s~g~~~----------~~~~~~~~g~~~a~~~-n--------~~i~l~~~d~~~--~~----~~~~~~~l 55 (305)
30021 T 4PYR_A 1 KVRIGVILPAESSALG----------EAAAVVRSGVEAAAQV-D--------QSAELYSVDATG--DN----VVERYRAA 55 (305)
30022 T ss_dssp CEEEEEEECCTTSTTH----------HHHHHHHHHHHHHHHH-H--------CCEEEEEEECCG--GG----HHHHHHHH
30023 T ss_pred CeeEEEEecCCCccch----------HHHHHHHHHHHHHHhc-C--------CCCeEEEEeCCC--cc----HHHHHHHH
30024 Confidence 47899999988 6431 3567788999999998 6 246677777654 21 22233333
30025
30026
30027 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
30028 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
30029 +. ++++++||+.++.....++. ..++|+|.+.+..+. . ...++.+++.++...++
30030 T Consensus 56 ~~-------------------~~v~~iig~~~s~~~~~~~~---~~~ip~i~~~~~~~~-~--~~~~~~~~~~~~~~~~~ 110 (305)
30031 T 4PYR_A 56 VA-------------------DGVNVVIGPLSRDSIVKLAP---SVTVPTLALNSVGRE-A--AANPKLYSLSLIVEGEA 110 (305)
30032 T ss_dssp HH-------------------TTCCEEECCCSHHHHHHHGG---GCCSCEEESSCCCTT-S--CCCTTEEECCCCHHHHH
30033 T ss_pred HH-------------------CCCCEEECCCCHHHHHHHhh---cCCCCEEEecCCChh-h--ccCCCeEEEecChHHHH
30034 Confidence 32 47889999877665544433 689999987765443 1 13567788888888888
30035
30036
30037 Q NP_000836.2 204 QAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFAN 283 (908)
30038 Q Consensus 204 ~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~~ 283 (908)
30039 ..+++++.+.+|+++++++.+++++....+.+++.+++. ++++.....+.. .++...+. + ..++|+|++...
30040 T Consensus 111 ~~~~~~~~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~~~~~----~d~~~~~~--~-~~~~d~v~~~~~ 182 (305)
30041 T 4PYR_A 111 RQLARLMRDDSRAAPLLVVGGDALSQRLGKAFADEWRAA-AGKPVRQMAFDA----NDMAPLLQ--A-AGQADAVALALD 182 (305)
30042 T ss_dssp HHHHHHHHHTTCSSEEEEECSSHHHHHHHHHHHHHHHHH-HSSCCEEEECCT----TCCHHHHH--H-HHTCSEEEEESC
30043 T ss_pred HHHHHHHHHCCCCceEEEEcCCHHHHHHHHHHHHHHHHC-CCcccEEEEeCh----hhhHHHHH--h-hcCCCEEEEeCC
30044 Confidence 899999887899999999977778888888888877765 455543322221 13333332 2 247898877765
30045
30046
30047 Q NP_000836.2 284 EDDIRRILEAAKKLNQSGHFLWIGSDSW 311 (908)
30048 Q Consensus 284 ~~~~~~~l~~~~~~g~~~~~~~i~~~~~ 311 (908)
30049 .... .++.++.+. +..|++.+.|
30050 T Consensus 183 ~~~~-~~l~~~~~~----~~~~~~~~~~ 205 (305)
30051 T 4PYR_A 183 VAQA-ARLKSALTP----DVPVYGTSQL 205 (305)
30052 T ss_dssp HHHH-HHHHHHSCT----TSCEEECGGG
30053 T ss_pred HHHH-HHHHHHcCC----CCCEEeeccc
30054 Confidence 4444 555554431 2456665433
30055
30056
30057 No 133
30058 >4YLE_A Simple sugar transport system substrate-binding; ABC TRANSPORTER SOLUTE BINDING PROTEIN; HET: MSE; 1.7A {Burkholderia multivorans}
30059 Probab=97.77 E-value=1.5e-08 Score=103.45 Aligned_cols=224 Identities=12% Similarity=0.071 Sum_probs=130.6 Template_Neff=12.200
30060
30061 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
30062 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
30063 ....+.++||++.|..+. ..+.....+++.++++.|. ++++.+...|+..++ +...+.
30064 T Consensus 27 ~~~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~a~~~~~~------~~~~~~~~~d~~~~~----~~~~~~ 84 (316)
30065 T 4YLE_A 27 AQAAGKPKVALVMKSLAN------------EFFLTMENGAKEYQKHNAS------QFDLITNGIKDETDT----ANQIRI 84 (316)
30066 T ss_dssp ---CCCCEEEEEEEETTS------------HHHHHHHHHHHHHHHHTTT------TCEEEEEEESSTTCH----HHHHHH
30067 T ss_pred hhhcCCCEEEEEecCCCC------------hHHHHHHHHHHHHHHhcCC------ccEEEEcccCCCCCH----HHHHHH
30068 Confidence 355678999999997542 2556778888888888653 233443333433332 222333
30069
30070
30071 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
30072 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
30073 ++++.. ++++++|+...+.... .....+...++|+|..+...+........++++++.++
30074 T Consensus 85 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~v~~~ 145 (316)
30075 T 4YLE_A 85 VEQMIV-------------------SKVDAIVLAPADSKALVPVVKKAVDAGIIVVNIDNRLDPDVLKSKNLNVPFVGPD 145 (316)
30076 T ss_dssp HHHHHH-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCEEEEESSCCCHHHHHTTTCCCCEEEEC
30077 T ss_pred HHHHHh-------------------cCCCEEEEcCCCccchHHHHHHHHHCCCEEEEEeCCCChHHHhhcCCCCcEeccC
30078 Confidence 444332 4788888754443322 44456677899999887654321111113567788888
30079
30080
30081 Q NP_000836.2 199 DSYQAQAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TP 273 (908)
30082 Q Consensus 199 ~~~~~~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~ 273 (908)
30083 +...++.+++++.+. +.+++++++. ++.++..+.+++++.+++. ++.+....... .+..+....++++++ ..
30084 T Consensus 146 ~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 222 (316)
30085 T 4YLE_A 146 NRKGARKVGDYLAKKLKAGDQVGIVEGVSTTTNAQQRTAGFQDAMKAG-GMKVVSVQSGE--WEIDKGNAVASAMLNEYP 222 (316)
30086 T ss_dssp HHHHHHHHHHHHHHHSCTTCEEEEEESCTTSHHHHHHHHHHHHHHHHH-TCEEEEEEECT--TCHHHHHHHHHHHHHHCT
30087 T ss_pred hHHHHHHHHHHHHHHccCCCeEEEEEcCCCChhHHHHHHHHHHHHHhC-CCeEEEEeecC--CCHHHHHHHHHHHHHHCC
30088 Confidence 888888888887654 4678999885 4456677788888888775 35443221111 112233444555542 13
30089
30090
30091 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30092 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30093 ++++|++.. +..+..+++++++.|+..++.+++.
30094 T Consensus 223 ~~~~i~~~~-~~~~~~~~~~l~~~g~~~~~~i~~~ 256 (316)
30095 T 4YLE_A 223 NLKALLCGN-DNMAIGAVSAVRAAGKQGKVYVVGY 256 (316)
30096 T ss_dssp TCCEEEESS-HHHHHHHHHHHHHTTCTTTSEEECS
30097 T ss_pred CeeEEEECC-hHHHHHHHHHHHHcCCCCCeEEEEe
30098 Confidence 566776654 4456677888888776333444444
30099
30100
30101 No 134
30102 >4RK1_B Ribose transcriptional regulator; sugar binding, transcription regulation, Enzyme; HET: CL, MSE, RIB; 1.9A {Enterococcus faecium DO}
30103 Probab=97.68 E-value=2.9e-08 Score=99.18 Aligned_cols=204 Identities=13% Similarity=0.094 Sum_probs=120.4 Template_Neff=12.200
30104
30105 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
30106 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
30107 .++.++||++.|..+. .++.....+++.++++.+ +++.+.|+..++. ...+.++
30108 T Consensus 4 ~~~~~~I~~~~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~ 57 (280)
30109 T 4RK1_B 4 TKETKTIGVLVPDITN------------PFFSTLMRGIEDILYKQN----------FVTILCNADSDHQ----KEIEYLA 57 (280)
30110 T ss_dssp ----CEEEEEESCTTS------------HHHHHHHHHHHHHHGGGT----------CEEEEEECCC---------CCHHH
30111 T ss_pred ccCCCEEEEEeCCCCC------------HHHHHHHHHHHHHHHHCC----------CEEEEEeCCCCHH----HHHHHHH
30112 Confidence 4567899999987542 245667788888877642 3344455443322 2233344
30113
30114
30115 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
30116 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
30117 ++.. ++++++|+...+.........+...++|+|..+...+ .++.+++.+++..
30118 T Consensus 58 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~-------~~~~~~v~~~~~~ 111 (280)
30119 T 4RK1_B 58 ELTR-------------------RGVDGFIIATSAVSTDAINENLKKQGRPFIVLDQKKS-------EGFSDAVRTDDFR 111 (280)
30120 T ss_dssp HHHH-------------------TTCCEEEECCTTSCHHHCCCCCCTTTCCEEEETTSCC-------CTTCEEEEECHHH
30121 T ss_pred HHHH-------------------cCCCEEEEeCCCCChHHHHHHHHHcCCCEEEECCCCC-------CCCCceEEECcHH
30122 Confidence 3332 4788888755443333445566778999988765432 1356677777777
30123
30124
30125 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
30126 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
30127 .++.+++++.+.+++++++++. +..++..+.++|++.+++. ++.+..........+..+....++++++ .++|+|+
30128 T Consensus 112 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~i~ 189 (280)
30129 T 4RK1_B 112 GGYLAGMHLLSLGHQTIALVYPENPPENVHARIEGFKSALDVY-QIPHDQLILLPTQFSKQGGYQITAELLD-SAATGVF 189 (280)
30130 T ss_dssp HHHHHHHHHHHTTCCSEEEEEESSCCHHHHHHHHHHHHHHHHT-TCCGGGEEEEEECSSHHHHHHTHHHHHH-SCCCEEE
30131 T ss_pred HHHHHHHHHHHCCCCEEEEEcCCCCChHHHHHHHHHHHHHHHc-CCCccceEEeCCCcccccHHHHHHHHhh-CCCCEEE
30132 Confidence 7888888887678889999985 3345666778888887764 3333211111100112234455566653 4788887
30133
30134
30135 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQS 300 (908)
30136 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~ 300 (908)
30137 +.. +..+..+++++++.|+.
30138 T Consensus 190 ~~~-~~~~~~~~~~l~~~g~~ 209 (280)
30139 T 4RK1_B 190 ALN-DELAFGLYRGLEEAGKS 209 (280)
30140 T ss_dssp ESS-HHHHHHHHHHHHHTTCC
30141 T ss_pred ECC-hHHHHHHHHHHHHcCCC
30142 Confidence 765 33467788888887764
30143
30144
30145 No 135
30146 >4RK1_D Ribose transcriptional regulator; sugar binding, transcription regulation, Enzyme; HET: RIB, CL; 1.9A {Enterococcus faecium DO}
30147 Probab=97.68 E-value=2.9e-08 Score=99.18 Aligned_cols=204 Identities=13% Similarity=0.094 Sum_probs=120.7 Template_Neff=12.200
30148
30149 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
30150 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
30151 .++.++||++.|..+. .++.....+++.++++.+ +++.+.|+..++. ...+.++
30152 T Consensus 4 ~~~~~~I~~~~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~ 57 (280)
30153 T 4RK1_D 4 TKETKTIGVLVPDITN------------PFFSTLMRGIEDILYKQN----------FVTILCNADSDHQ----KEIEYLA 57 (280)
30154 T ss_dssp ----CEEEEEESCTTS------------HHHHHHHHHHHHHHHTTT----------CEEEEEECCC--------CCCHHH
30155 T ss_pred ccCCCEEEEEeCCCCC------------HHHHHHHHHHHHHHHHCC----------CEEEEEeCCCCHH----HHHHHHH
30156 Confidence 4567899999987542 245667788888877642 3344455443322 2233344
30157
30158
30159 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
30160 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
30161 ++.. ++++++|+...+.........+...++|+|..+...+ .++.+++.+++..
30162 T Consensus 58 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~-------~~~~~~v~~~~~~ 111 (280)
30163 T 4RK1_D 58 ELTR-------------------RGVDGFIIATSAVSTDAINENLKKQGRPFIVLDQKKS-------EGFSDAVRTDDFR 111 (280)
30164 T ss_dssp HHHH-------------------TTCCEEEECCTTSCHHHCCCCCCTTTCCEEEETTSCC-------CTTCEEEEECHHH
30165 T ss_pred HHHH-------------------cCCCEEEEeCCCCChHHHHHHHHHcCCCEEEECCCCC-------CCCCceEEECcHH
30166 Confidence 3332 4788888755443333445566778999988765432 1356677777777
30167
30168
30169 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
30170 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
30171 .++.+++++.+.+++++++++. +..++..+.++|++.+++. ++.+..........+..+....++++++ .++|+|+
30172 T Consensus 112 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~i~ 189 (280)
30173 T 4RK1_D 112 GGYLAGMHLLSLGHQTIALVYPENPPENVHARIEGFKSALDVY-QIPHDQLILLPTQFSKQGGYQITAELLD-SAATGVF 189 (280)
30174 T ss_dssp HHHHHHHHHHHTTCCSEEEEEESSCCHHHHHHHHHHHHHHHHT-TCCGGGEEEEEECSSHHHHHHTHHHHHT-SCCSEEE
30175 T ss_pred HHHHHHHHHHHCCCCEEEEEcCCCCChHHHHHHHHHHHHHHHc-CCCccceEEeCCCcccccHHHHHHHHhh-CCCCEEE
30176 Confidence 7888888887678889999985 3345666778888887764 3333211111100112234455566653 4788887
30177
30178
30179 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQS 300 (908)
30180 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~ 300 (908)
30181 +.. +..+..+++++++.|+.
30182 T Consensus 190 ~~~-~~~~~~~~~~l~~~g~~ 209 (280)
30183 T 4RK1_D 190 ALN-DELAFGLYRGLEEAGKS 209 (280)
30184 T ss_dssp ESS-HHHHHHHHHHHHHTTCC
30185 T ss_pred ECC-hHHHHHHHHHHHHcCCC
30186 Confidence 765 33467788888887764
30187
30188
30189 No 136
30190 >3BRQ_A HTH-type transcriptional regulator ascG; transcriptional repressor structure Escherichia coli; HET: MSE, SO4, FRU; 2.0A {Escherichia coli}
30191 Probab=97.64 E-value=3.8e-08 Score=99.33 Aligned_cols=208 Identities=10% Similarity=0.021 Sum_probs=121.6 Template_Neff=12.100
30192
30193 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
30194 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
30195 ...++++||++.|..+.. ..++.....+++.++++.+ +++.+.|+..++. ...+.+
30196 T Consensus 15 ~~~~~~~I~~i~~~~~~~----------~~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~ 70 (296)
30197 T 3BRQ_A 15 SAKSTQTLGLVVTNTLYH----------GIYFSELLFHAARMAEEKG----------RQLLLADGKHSAE----EERQAI 70 (296)
30198 T ss_dssp ----CCEEEEEECGGGCC------------CHHHHHHHHHHHHHHTT----------CEEEEECCTTSHH----HHHHHH
30199 T ss_pred ccCCCCEEEEEecCcccC----------CccHHHHHHHHHHHHHHcC----------CeEEEEeCCCCHH----HHHHHH
30200 Confidence 345689999999976421 1245567778877777642 3444555544422 233344
30201
30202
30203 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
30204 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
30205 ++++. .+++++|+...+.....+...++..++|+|..+...+. +.++++..++.
30206 T Consensus 71 ~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-------~~~~~v~~~~~ 124 (296)
30207 T 3BRQ_A 71 QYLLD-------------------LRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRK-------NSSHSVWCDHK 124 (296)
30208 T ss_dssp HHHHH-------------------TTCSEEEEECSSSCHHHHHHHHHTCSSCEEEESCCCSS-------SGGGEECCCHH
30209 T ss_pred HHHHh-------------------cCCCEEEEeCCCCChhhHHHHHHHcCCCEEEeCCCCCC-------CCCcEEEeCcH
30210 Confidence 44332 47888887655443334445566789999987764331 34566667777
30211
30212
30213 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
30214 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
30215 ..++.+++++.+.++++++++..+.. ++..+.++|++.+++. ++.+.....+..+.+..+....++++++. .++|+
30216 T Consensus 125 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (296)
30217 T 3BRQ_A 125 QTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQH-GIALNEKLIANGKWTPASGAEGVEMLLERGAKFSA 203 (296)
30218 T ss_dssp HHHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHTT-TCCCCGGGEECCCSSHHHHHHHHHHHHTC--CCSE
30219 T ss_pred HHHHHHHHHHHHCCCCeEEEEeCCCCChhHHHHHHHHHHHHHHC-CCCCCccceecCCCChhhHHHHHHHHHHcCCCCCE
30220 Confidence 77777788876668899999985433 5666778888888775 34433221111101122344455555431 23777
30221
30222
30223 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
30224 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
30225 |++.. +..+..+++++++.|+.
30226 T Consensus 204 v~~~~-~~~~~~~~~~~~~~g~~ 225 (296)
30227 T 3BRQ_A 204 LVASN-DDMAIGAMKALHERGVA 225 (296)
30228 T ss_dssp EEESS-HHHHHHHHHHHHHHTCC
30229 T ss_pred EEECC-HHHHHHHHHHHHHCCCC
30230 Confidence 77664 44566778888887764
30231
30232
30233 No 137
30234 >3BRQ_B HTH-type transcriptional regulator ascG; transcriptional repressor structure Escherichia coli; HET: SO4, FRU; 2.0A {Escherichia coli}
30235 Probab=97.64 E-value=3.8e-08 Score=99.33 Aligned_cols=208 Identities=10% Similarity=0.021 Sum_probs=122.3 Template_Neff=12.100
30236
30237 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
30238 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
30239 ...++++||++.|..+.. ..++.....+++.++++.+ +++.+.|+..++. ...+.+
30240 T Consensus 15 ~~~~~~~I~~i~~~~~~~----------~~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~ 70 (296)
30241 T 3BRQ_B 15 SAKSTQTLGLVVTNTLYH----------GIYFSELLFHAARMAEEKG----------RQLLLADGKHSAE----EERQAI 70 (296)
30242 T ss_dssp ----CCEEEEEEECCSCC----------SSCHHHHHHHHHHHHHHTT----------CEEEEEEEETSHH----HHHHHH
30243 T ss_pred ccCCCCEEEEEecCcccC----------CccHHHHHHHHHHHHHHcC----------CeEEEEeCCCCHH----HHHHHH
30244 Confidence 345689999999976421 1245567778877777642 3444555544422 233344
30245
30246
30247 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
30248 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
30249 ++++. .+++++|+...+.....+...++..++|+|..+...+. +.++++..++.
30250 T Consensus 71 ~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-------~~~~~v~~~~~ 124 (296)
30251 T 3BRQ_B 71 QYLLD-------------------LRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRK-------NSSHSVWCDHK 124 (296)
30252 T ss_dssp HHHHH-------------------TTCSEEEEECSSSCHHHHHHHHHTCSSCEEEESSCCSS-------CGGGEECBCHH
30253 T ss_pred HHHHh-------------------cCCCEEEEeCCCCChhhHHHHHHHcCCCEEEeCCCCCC-------CCCcEEEeCcH
30254 Confidence 44332 47888887655443334445566789999987764331 34566667777
30255
30256
30257 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
30258 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
30259 ..++.+++++.+.++++++++..+.. ++..+.++|++.+++. ++.+.....+..+.+..+....++++++. .++|+
30260 T Consensus 125 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (296)
30261 T 3BRQ_B 125 QTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQH-GIALNEKLIANGKWTPASGAEGVEMLLERGAKFSA 203 (296)
30262 T ss_dssp HHHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHHT-TCCCCGGGEECCCSSHHHHHHHHHHHHHHCCCCSE
30263 T ss_pred HHHHHHHHHHHHCCCCeEEEEeCCCCChhHHHHHHHHHHHHHHC-CCCCCccceecCCCChhhHHHHHHHHHHcCCCCCE
30264 Confidence 77777788876668899999985433 5666778888888775 34433221111101122344455555431 23777
30265
30266
30267 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
30268 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
30269 |++.. +..+..+++++++.|+.
30270 T Consensus 204 v~~~~-~~~~~~~~~~~~~~g~~ 225 (296)
30271 T 3BRQ_B 204 LVASN-DDMAIGAMKALHERGVA 225 (296)
30272 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
30273 T ss_pred EEECC-HHHHHHHHHHHHHCCCC
30274 Confidence 77664 44566778888887764
30275
30276
30277 No 138
30278 >5DTE_B Monosaccharide-transporting ATPase (E.C.3.6.3.17); Solute Binding Protein, ENZYME FUNCTION; HET: ALL; 2.7A {Actinobacillus succinogenes (strain ATCC 55618 / 130Z)}
30279 Probab=97.59 E-value=5.2e-08 Score=99.26 Aligned_cols=222 Identities=16% Similarity=0.113 Sum_probs=126.5 Template_Neff=11.700
30280
30281 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
30282 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
30283 ...++++||++.|..+. .++.....+++.++++. |+++.+...|+..++ +...+.+
30284 T Consensus 22 ~~~~~~~Igvv~~~~~~------------~~~~~~~~g~~~a~~~~--------g~~v~~~~~~~~~~~----~~~~~~~ 77 (311)
30285 T 5DTE_B 22 SMADKPQIALLMKTLSN------------EYFISMRQGAEETAKQK--------DIDLIVQVAEKEDST----EQLVGLV 77 (311)
30286 T ss_dssp ---CCCEEEEEESCSSS------------HHHHHHHHHHHHHHHHT--------TCEECCEECSSTTCH----HHHHHHH
30287 T ss_pred ccCCCCEEEEEeCCCCC------------HHHHHHHHHHHHHHHHc--------CCEEEEEccCCCCcH----HHHHHHH
30288 Confidence 34468999999997542 25567788888888775 345655555543332 1222333
30289
30290
30291 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
30292 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
30293 ++++. ++++++|+...+... ......+.+.++|+|..+...+........++.+.+.+++
30294 T Consensus 78 ~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~v~~d~ 138 (311)
30295 T 5DTE_B 78 ENMIA-------------------KKVDAIIVTPNDSIAFIPAFQKAEKAGIPIIDLDVRLDAKAAEAAGLKFNYVGVDN 138 (311)
30296 T ss_dssp HHHHH-------------------TTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEESSCCCHHHHHHTTCCCEEEECCH
30297 T ss_pred HHHHh-------------------CCCCEEEECCCCccchHHHHHHHHHCCCCEEEEcCCCCHHHHHHhcCceEEEEeCh
30298 Confidence 43332 467877764433322 2444566778999998876543211100124567777888
30299
30300
30301 Q NP_000836.2 200 SYQAQAMVDIVTAL-GW-NYVSTLASE--GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPN 274 (908)
30302 Q Consensus 200 ~~~~~~~~~~l~~~-~~-~~v~ii~~~--~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~ 274 (908)
30303 ...++.+++++.+. +. ++++++... ..++..+.++|++.+++.+++++....... .+..+....++++++ ..+
30304 T Consensus 139 ~~~~~~~~~~l~~~~g~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 216 (311)
30305 T 5DTE_B 139 FNGGYLEAKNLAEAIGKKGNVAILEGIPGVDNGEQRKGGALKAFAEYPDIKIVASQSAN--WETEQALNVTTNILTANPN 216 (311)
30306 T ss_dssp HHHHHHHHHHHHHHTTSEEEEEEEECCSSCHHHHHHHHHHHHHHTTCTEEEEEEEEECT--TCHHHHHHHHHHHTTTSTT
30307 T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEECCCCChhHHHHHHHHHHHHHhCCCeEEEEeccCC--CCHHHHHHHHHHHHHHCCC
30308 Confidence 77888888887654 76 889999743 235667788888887764223332211111 112234444555542 135
30309
30310
30311 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30312 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30313 +|+|++.. +..+..+++++++.|+..++.+++.
30314 T Consensus 217 ~d~i~~~~-~~~a~~~~~~l~~~g~~~~i~vi~~ 249 (311)
30315 T 5DTE_B 217 INGIFAAN-DNMAIGAVTAVENAGLAGKVLVSGY 249 (311)
30316 T ss_dssp CCEEEESS-HHHHHHHHHHHHHTTCBTTBEEECC
30317 T ss_pred cCEEEECC-hhhHHHHHHHHHHCCCCCCeEEEEe
30318 Confidence 66676553 4456677888887776323344443
30319
30320
30321 No 139
30322 >3KSM_B ABC-type sugar transport system, periplasmic; ABC-type sugar transport system, periplasmic; HET: MSE, BDR; 1.9A {Hahella chejuensis}
30323 Probab=97.58 E-value=5.5e-08 Score=96.87 Aligned_cols=212 Identities=15% Similarity=0.056 Sum_probs=121.5 Template_Neff=12.200
30324
30325 Q NP_000836.2 46 IILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALIE 125 (908)
30326 Q Consensus 46 i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~~ 125 (908)
30327 ++||++.|..+. .++..+..+++.++++. |+++.+...|+..++. ...+.+++++.
30328 T Consensus 1 i~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~----~~~~~~~~~~~ 56 (276)
30329 T 3KSM_B 1 PKLLLVLKGDSN------------AYWRQVYLGAQKAADEA--------GVTLLHRSTKDDGDIA----GQIQILSYHLS 56 (276)
30330 T ss_dssp -CEEEECSCSSS------------THHHHHHHHHHHHHHHH--------TCCEEECCCSSTTCHH----HHHHHHHHHHH
30331 T ss_pred CeEEEEcCCCCC------------HHHHHHHHHHHHHHHHh--------CCEEEEecCCCCCCHH----HHHHHHHHHHH
30332 Confidence 478999887542 25567778888888775 3456555545433322 22333333332
30333
30334
30335 Q NP_000836.2 126 KDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
30336 Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
30337 .+++|++|+...+.... .....+...++|+|..+...+. .++++++.+++...++
30338 T Consensus 57 ------------------~~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~------~~~~~~v~~d~~~~~~ 112 (276)
30339 T 3KSM_B 57 ------------------QAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDSDLAG------DAHQGLVATDNYAAGQ 112 (276)
30340 T ss_dssp ------------------CCC-CEEEECCSCTTTTHHHHHHHHHTTCCEEEESSCCSS------SSSSEEEECCHHHHHH
30341 T ss_pred ------------------hCCCCEEEEcCCCHHhcHHHHHHHHHCCCCEEEEcCCCCC------CccceEEEcCHHHHHH
30342 Confidence 14788887654443322 3345567789999987654321 2456777777777777
30343
30344
30345 Q NP_000836.2 205 AMVDIVTAL----GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
30346 Q Consensus 205 ~~~~~l~~~----~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
30347 .+++++.+. +.++++++.. ++.++..+.++|++.+++.+ ........+.. .+..+....+++++.. .++++
30348 T Consensus 113 ~~~~~l~~~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 190 (276)
30349 T 3KSM_B 113 LAARALLATLDLSKERNIALLRLRAGNASTDQREQGFLDVLRKHD-KIRIIAAPYAG-DDRGAARSEMLRLLKETPTIDG 190 (276)
30350 T ss_dssp HHHHHHHHHSCTTSCEEEEECBCCTTCHHHHHHHHHHHHHHTTCT-TEEEEECCBCC-SCHHHHHHHHHHHHHHCSCCCE
30351 T ss_pred HHHHHHHHHcCcCCCceEEEEECCCCChhHHHHHHHHHHHHhhcC-CeEEEECCcCC-CCHHHHHHHHHHHHHHCCCCCE
30352 Confidence 888877554 7889999985 34556667788888877643 22111111110 1112333445555421 24677
30353
30354
30355 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30356 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30357 |++.. +..+..+++++++.|+..++.+++.
30358 T Consensus 191 i~~~~-~~~~~~~~~~l~~~g~~~~~~i~~~ 220 (276)
30359 T 3KSM_B 191 LFTPN-ESTTIGALVAIRQSGMSKQFGFIGF 220 (276)
30360 T ss_dssp EECCS-HHHHHHHHHHHHHTTCTTSSEEEEE
30361 T ss_pred EEeCC-hHHHHHHHHHHHHcCCCCceEEEee
30362 Confidence 76654 4456678888888776433444443
30363
30364
30365 No 140
30366 >3KSM_A ABC-type sugar transport system, periplasmic; ABC-type sugar transport system, periplasmic; HET: BDR; 1.9A {Hahella chejuensis}
30367 Probab=97.58 E-value=5.5e-08 Score=96.87 Aligned_cols=212 Identities=15% Similarity=0.056 Sum_probs=122.8 Template_Neff=12.200
30368
30369 Q NP_000836.2 46 IILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALIE 125 (908)
30370 Q Consensus 46 i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~~ 125 (908)
30371 ++||++.|..+. .++..+..+++.++++. |+++.+...|+..++. ...+.+++++.
30372 T Consensus 1 i~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~----~~~~~~~~~~~ 56 (276)
30373 T 3KSM_A 1 PKLLLVLKGDSN------------AYWRQVYLGAQKAADEA--------GVTLLHRSTKDDGDIA----GQIQILSYHLS 56 (276)
30374 T ss_dssp CEEEEECSCSSS------------THHHHHHHHHHHHHHHH--------TCEEEECCCSSTTCHH----HHHHHHHHHHH
30375 T ss_pred CeEEEEcCCCCC------------HHHHHHHHHHHHHHHHh--------CCEEEEecCCCCCCHH----HHHHHHHHHHH
30376 Confidence 478999887542 25567778888888775 3456555545433322 22333333332
30377
30378
30379 Q NP_000836.2 126 KDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
30380 Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
30381 .+++|++|+...+.... .....+...++|+|..+...+. .++++++.+++...++
30382 T Consensus 57 ------------------~~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~------~~~~~~v~~d~~~~~~ 112 (276)
30383 T 3KSM_A 57 ------------------QAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDSDLAG------DAHQGLVATDNYAAGQ 112 (276)
30384 T ss_dssp ------------------HSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCSS------SCSSEEEECCHHHHHH
30385 T ss_pred ------------------hCCCCEEEEcCCCHHhcHHHHHHHHHCCCCEEEEcCCCCC------CccceEEEcCHHHHHH
30386 Confidence 14788887654443322 3345567789999987654321 2456777777777777
30387
30388
30389 Q NP_000836.2 205 AMVDIVTAL----GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
30390 Q Consensus 205 ~~~~~l~~~----~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
30391 .+++++.+. +.++++++.. ++.++..+.++|++.+++.+ ........+.. .+..+....+++++.. .++++
30392 T Consensus 113 ~~~~~l~~~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 190 (276)
30393 T 3KSM_A 113 LAARALLATLDLSKERNIALLRLRAGNASTDQREQGFLDVLRKHD-KIRIIAAPYAG-DDRGAARSEMLRLLKETPTIDG 190 (276)
30394 T ss_dssp HHHHHHHHHSCTTSCEEEEECBCCTTCHHHHHHHHHHHHHHTTCT-TEEEEECCBCC-SSHHHHHHHHHHHHHHCSCCCE
30395 T ss_pred HHHHHHHHHcCcCCCceEEEEECCCCChhHHHHHHHHHHHHhhcC-CeEEEECCcCC-CCHHHHHHHHHHHHHHCCCCCE
30396 Confidence 888877554 7889999985 34556667788888877643 22111111110 1112333445555421 24677
30397
30398
30399 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30400 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30401 |++.. +..+..+++++++.|+..++.+++.
30402 T Consensus 191 i~~~~-~~~~~~~~~~l~~~g~~~~~~i~~~ 220 (276)
30403 T 3KSM_A 191 LFTPN-ESTTIGALVAIRQSGMSKQFGFIGF 220 (276)
30404 T ss_dssp EECCS-HHHHHHHHHHHHHTTCTTSSEEEEE
30405 T ss_pred EEeCC-hHHHHHHHHHHHHcCCCCceEEEee
30406 Confidence 76654 4456678888888776433444443
30407
30408
30409 No 141
30410 >4RSM_A Periplasmic binding protein/LacI transcriptional regulator; SUGAR TRANSPORTER, ABC-TYPE, ENZYME FUNCTION; HET: 3VB; 1.6A {Mycobacterium smegmatis}
30411 Probab=97.58 E-value=5.6e-08 Score=99.91 Aligned_cols=213 Identities=12% Similarity=0.053 Sum_probs=123.2 Template_Neff=11.300
30412
30413 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
30414 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
30415 ...+++++||++.|.++ .++.....+++.++++.| +++.+.|...+. ....+.
30416 T Consensus 7 ~~~~~~~~Ig~i~~~~~-------------~~~~~~~~g~~~~~~~~~----------~~l~~~~~~~~~----~~~~~~ 59 (327)
30417 T 4RSM_A 7 AANSDTTRIGVTVYDMS-------------SFITAGKEGMDAYAKDNN----------IELIWNSANLDV----STQASQ 59 (327)
30418 T ss_dssp ----CCEEEEEEESCCC-------------HHHHHHHHHHHHHHHHHT----------EEEEEEECTTCH----HHHHHH
30419 T ss_pred cccCCCeEEEEEECCcc-------------HHHHHHHHHHHHHHHhCC----------CEEEEecCCCCH----HHHHHH
30420 Confidence 45677899999998753 245667778888887653 344455544332 222333
30421
30422
30423 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
30424 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
30425 +++++. ++++++|+...+.. .......+...++|+|..+...+. .++.+++.++
30426 T Consensus 60 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d 114 (327)
30427 T 4RSM_A 60 VDSMIN-------------------QGVDAIIVVPVQADSLAPQVASAKAKGIPLVPVNAALDS------KDIAGNVQPD 114 (327)
30428 T ss_dssp HHHHHH-------------------TTCSEEEEECSCSSCCHHHHHHHHHTTCCEEEBSSCCSC------SCSSCCBEEC
30429 T ss_pred HHHHHH-------------------cCCCEEEEeCCCccchHHHHHHHHHCCCCEEEECCCCCc------cCCceEEcCC
30430 Confidence 443332 46787775433322 224445566789999987764331 2456777788
30431
30432
30433 Q NP_000836.2 199 DSYQAQAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-- 272 (908)
30434 Q Consensus 199 ~~~~~~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-- 272 (908)
30435 +...+..+++++.+. +.++|+++.. ++.++..+.+++.+.+++.+++.+....... .+..+....+++++..
30436 T Consensus 115 ~~~~~~~~~~~l~~~~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~ 192 (327)
30437 T 4RSM_A 115 DVAAGAQEMQMMADRLGGKGNIVILQGPLGQSGELDRSKGIEQVLAKYPDIKVLAKDTAN--WKRDEAVNKMKNWISGFG 192 (327)
30438 T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEECSTTSHHHHHHHHHHHHHHHHCTTEEEEEEEECT--TCHHHHHHHHHHHHHHHG
30439 T ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEECCCCChhHHHHHHHHHHHHHhCCCeEEEEEecCC--CCHHHHHHHHHHHHHhhc
30440 Confidence 777788888887654 6789999985 4445667778888877664223332211111 1112334445555421
30441
30442
30443 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30444 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30445 .++|+|++.. +..+..+++++++.|.. ++.+++.
30446 T Consensus 193 ~~~d~i~~~~-~~~a~~~~~al~~~g~~-~~~iig~ 226 (327)
30447 T 4RSM_A 193 PQIDGVVAQN-DDMGLGALQALKESGRT-GVPIVGI 226 (327)
30448 T ss_dssp GGCCEEEESS-HHHHHHHHHHHHHTTCC-CCCEECS
30449 T ss_pred CCCCEEEECC-hHHHHHHHHHHHHcCCC-CCCEEEe
30450 Confidence 3577777664 33566778888877763 2344444
30451
30452
30453 No 142
30454 >6HBD_B ABC transporter periplasmic-binding protein YtfQ; periplasmic binding protein, SUGAR BINDING; HET: GZL, ZN; 2.44A {Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)}
30455 Probab=97.57 E-value=5.7e-08 Score=99.43 Aligned_cols=211 Identities=12% Similarity=0.056 Sum_probs=122.7 Template_Neff=11.600
30456
30457 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
30458 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
30459 ....++.++||++.|..+. .++.....+++.++++.| +++.+.|+..++. ...+
30460 T Consensus 11 ~~~~~~~~~Igvi~~~~~~------------~~~~~~~~g~~~a~~~~~----------~~l~~~~~~~~~~----~~~~ 64 (320)
30461 T 6HBD_B 11 GSAPDGALTLGFAQVGAES------------GWRTANTESIKSAAEEAG----------VNLKFADANGEQE----KQIS 64 (320)
30462 T ss_dssp -----CCEEEEEECCCCCS------------HHHHHHHHHHHHHHHHHT----------EEEEEECCTTCHH----HHHH
30463 T ss_pred CCCCCCCcEEEEEecCCCC------------HHHHHHHHHHHHHHHHcC----------CEEEEECCCCCHH----HHHH
30464 Confidence 4566788999999987542 255667788888887653 3444555543322 2233
30465
30466
30467 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASS-VSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
30468 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~-~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
30469 .+++++. ++++++|....+. ........+...++|+|..+...+... ..++++++.+
30470 T Consensus 65 ~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~---~~~~~~~v~~ 122 (320)
30471 T 6HBD_B 65 AIRSFIQ-------------------QGVDVIAFSPVVRTGWDAVLQETKNAGIPVILTDRAVDTQD---TDVYKTFIGA 122 (320)
30472 T ss_dssp HHHHHHH-------------------HTCSEEEECCSSSSSCHHHHHHHHHHTCCEEEESCCCCCSS---SSSCSEEEEC
30473 T ss_pred HHHHHHH-------------------cCCCEEEEcCCCccCHHHHHHHHHHCCCCEEEeCCCCCCCC---CcchheEecC
30474 Confidence 3443332 4677766543332 223445566678999998776543211 1355677888
30475
30476
30477 Q NP_000836.2 198 PDSYQAQAMVDIVTA-----LGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLL 270 (908)
30478 Q Consensus 198 ~~~~~~~~~~~~l~~-----~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~ 270 (908)
30479 ++...+..+++++.+ .+.++++++.. +..++..+.++|++.+++.+++.+....... .+..+....+++++
30480 T Consensus 123 d~~~~~~~~~~~l~~~~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 200 (320)
30481 T 6HBD_B 123 DFIEEGRRAGQWVADQYASATGPVNIVQLEGTTGADPAIDRKTGFAEGISKNPNLKIVASQTGD--FTRSGGKQVMEAFL 200 (320)
30482 T ss_dssp CHHHHHHHHHHHHHHHSSSCSSCEEEEEEECSTTCHHHHHHHHHHHHHHTTCTTEEEEEEEECT--TSHHHHHHHHHHHH
30483 T ss_pred ChHHHHHHHHHHHHHHHHhcCCCceEEEEEcCCCChHHHHHHHHHHHHHhhCCCeEEEEeecCC--CCHHHHHHHHHHHH
30484 Confidence 877777788877754 47789999985 3456667778888887764224443221111 11223444555554
30485
30486
30487 Q NP_000836.2 271 E-TPNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
30488 Q Consensus 271 ~-~~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
30489 + ..++|+|++.. +..+..+++++++.|+.
30490 T Consensus 201 ~~~~~~d~i~~~~-~~~a~~~~~~l~~~g~~ 230 (320)
30491 T 6HBD_B 201 KSTPQIDVVFAQN-DDMGLGAMEAIEAAGKK 230 (320)
30492 T ss_dssp HHCSCCCEEEESS-HHHHHHHHHHHHHTTCC
30493 T ss_pred HHCCCCCEEEECC-HHHHHHHHHHHHHcCCC
30494 Confidence 2 13567776654 34556788888887764
30495
30496
30497 No 143
30498 >4JOQ_A ABC ribose transporter, periplasmic solute-binding; structural genomics, ribose, ABC transporter; 1.9A {Rhodobacter sphaeroides}
30499 Probab=97.56 E-value=6.4e-08 Score=97.68 Aligned_cols=218 Identities=11% Similarity=0.018 Sum_probs=129.3 Template_Neff=12.000
30500
30501 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
30502 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
30503 .++.++||++.|..+. .++.....+++.+++++|+.+ ..+++.+.++ .++ ....+.++
30504 T Consensus 4 ~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~-~~~----~~~~~~~~ 61 (297)
30505 T 4JOQ_A 4 QEKVGTIGIAIPSATH------------GFMGGLNFHAQDTIKRLQEVY-----PQLDFVLATA-GNA----GKMVNDIE 61 (297)
30506 T ss_dssp CCCCEEEEEEEECCSS------------HHHHHHHHHHHHHHHHHHHHC-----TTEEEEEEEE-SSH----HHHHHHHH
30507 T ss_pred cccceEEEEEeccCCC------------hhHHHHHHHHHHHHHHHHHHc-----ccccEEEEcC-CCH----HHHHHHHH
30508 Confidence 4578999999997642 256677889999999988643 1344444444 222 12223334
30509
30510
30511 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
30512 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
30513 +++. .++++++|+...+.... .....+...++|+|..+...+. ..++.+++.+++.
30514 T Consensus 62 ~l~~------------------~~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~-----~~~~~~~v~~d~~ 118 (297)
30515 T 4JOQ_A 62 DMVA------------------TRNISALVVLPFESEPLTSPVQAVKEAGIWVTVVDRGLSV-----EGIEDLYVAGDNP 118 (297)
30516 T ss_dssp HHHH------------------HHCCSEEEECCSSTTTTHHHHHHHHHTTCEEEEESSCCSS-----SSCCSEEEEECHH
30517 T ss_pred HHHH------------------hCCCCEEEEcCCCCCCCcHHHHHHHHcCCEEEEEeCCCCC-----CCceeEEEEcCch
30518 Confidence 3332 14788888765444322 3445566789999987764431 1345677778887
30519
30520
30521 Q NP_000836.2 201 YQAQAMVDIVTAL--GWNYVSTLASE-GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNAR 276 (908)
30522 Q Consensus 201 ~~~~~~~~~l~~~--~~~~v~ii~~~-~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 276 (908)
30523 ..++.+++++.+. +.++++++..+ ..++..+.+++++.+++. ++++....... .+..+....++++++. .+++
30524 T Consensus 119 ~~~~~~~~~l~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (297)
30525 T 4JOQ_A 119 GFGRVAGEYFAQHLESGKKIVVLRGIPTTLDNERVEAFTAAIEGS-GIEVLDMQHGN--WNRDDAFNVMQDFLSKYPQID 195 (297)
30526 T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEECSSSHHHHHHHHHHHHHTTTS-CCEEEEEEECT--TCHHHHHHHHHHHHHHCSCCC
30527 T ss_pred HHHHHHHHHHHHHccCCCEEEEEECCCCChHHHHHHHHHHHHhcC-CcEEeecccCC--CCHHHHHHHHHHHHHhCCCCC
30528 Confidence 7788888887554 67889988844 345566777888877765 35443221111 1122344455555421 2366
30529
30530
30531 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30532 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30533 +|++.. +..+..+++++++.|+..++.+++.
30534 T Consensus 196 ~i~~~~-~~~a~~~~~~l~~~g~~~~~~v~g~ 226 (297)
30535 T 4JOQ_A 196 AVWAAD-DDMAIGAMEAIAQAGRTEEMWVMGG 226 (297)
30536 T ss_dssp EEECCS-HHHHHHHHHHHHHTTCGGGCEEECC
30537 T ss_pred EEEECC-hHHHHHHHHHHHHCCCCCCcEEEec
30538 Confidence 666553 4446677788887776323444443
30539
30540
30541 No 144
30542 >4JOQ_B ABC ribose transporter, periplasmic solute-binding; structural genomics, ribose, ABC transporter; HET: MSE; 1.9A {Rhodobacter sphaeroides}
30543 Probab=97.56 E-value=6.4e-08 Score=97.68 Aligned_cols=218 Identities=11% Similarity=0.018 Sum_probs=129.3 Template_Neff=12.000
30544
30545 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
30546 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
30547 .++.++||++.|..+. .++.....+++.+++++|+.+ ..+++.+.++ .++ ....+.++
30548 T Consensus 4 ~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~-~~~----~~~~~~~~ 61 (297)
30549 T 4JOQ_B 4 QEKVGTIGIAIPSATH------------GFMGGLNFHAQDTIKRLQEVY-----PQLDFVLATA-GNA----GKMVNDIE 61 (297)
30550 T ss_dssp CCCCEEEEEEEECCSS------------HHHHHHHHHHHHHHHHHHHHC-----TTEEEEEEEE-SSH----HHHHHHHH
30551 T ss_pred cccceEEEEEeccCCC------------hhHHHHHHHHHHHHHHHHHHc-----ccccEEEEcC-CCH----HHHHHHHH
30552 Confidence 4578999999997642 256677889999999988643 1344444444 222 12223334
30553
30554
30555 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
30556 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
30557 +++. .++++++|+...+.... .....+...++|+|..+...+. ..++.+++.+++.
30558 T Consensus 62 ~l~~------------------~~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~-----~~~~~~~v~~d~~ 118 (297)
30559 T 4JOQ_B 62 DMVA------------------TRNISALVVLPFESEPLTSPVQAVKEAGIWVTVVDRGLSV-----EGIEDLYVAGDNP 118 (297)
30560 T ss_dssp HHHH------------------HHCCSEEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCSS-----TTCCSEEEEECHH
30561 T ss_pred HHHH------------------hCCCCEEEEcCCCCCCCcHHHHHHHHcCCEEEEEeCCCCC-----CCceeEEEEcCch
30562 Confidence 3332 14788888765444322 3445566789999987764431 1345677778887
30563
30564
30565 Q NP_000836.2 201 YQAQAMVDIVTAL--GWNYVSTLASE-GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNAR 276 (908)
30566 Q Consensus 201 ~~~~~~~~~l~~~--~~~~v~ii~~~-~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 276 (908)
30567 ..++.+++++.+. +.++++++..+ ..++..+.+++++.+++. ++++....... .+..+....++++++. .+++
30568 T Consensus 119 ~~~~~~~~~l~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (297)
30569 T 4JOQ_B 119 GFGRVAGEYFAQHLESGKKIVVLRGIPTTLDNERVEAFTAAIEGS-GIEVLDMQHGN--WNRDDAFNVMQDFLSKYPQID 195 (297)
30570 T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEECSSSHHHHHHHHHHHHHHTTS-CCEEEEEEECT--TCHHHHHHHHHHHHHHCSCCC
30571 T ss_pred HHHHHHHHHHHHHccCCCEEEEEECCCCChHHHHHHHHHHHHhcC-CcEEeecccCC--CCHHHHHHHHHHHHHhCCCCC
30572 Confidence 7788888887554 67889988844 345566777888877765 35443221111 1122344455555421 2366
30573
30574
30575 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30576 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30577 +|++.. +..+..+++++++.|+..++.+++.
30578 T Consensus 196 ~i~~~~-~~~a~~~~~~l~~~g~~~~~~v~g~ 226 (297)
30579 T 4JOQ_B 196 AVWAAD-DDMAIGAMEAIAQAGRTEEMWVMGG 226 (297)
30580 T ss_dssp EEECCS-HHHHHHHHHHHHHTTCGGGCEEECC
30581 T ss_pred EEEECC-hHHHHHHHHHHHHCCCCCCcEEEec
30582 Confidence 666553 4446677788887776323444443
30583
30584
30585 No 145
30586 >5HSG_A Putative ABC transporter, nucleotide binding/ATPase; ABC TRANSPORTER SOLUTE BINDING PROTEIN; HET: MSE; 1.3A {Klebsiella pneumoniae subsp. pneumoniae}
30587 Probab=97.54 E-value=7e-08 Score=98.22 Aligned_cols=214 Identities=10% Similarity=0.040 Sum_probs=121.8 Template_Neff=11.600
30588
30589 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
30590 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
30591 ...+.++||++.|..+. .++.....+++.++++.| +++.+.|+..++. ...+.+
30592 T Consensus 21 ~~~~~~~Ig~~~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~ 74 (310)
30593 T 5HSG_A 21 QSMAGPTYALVQINQQA------------LFFNLMNKGAQDAAKASG----------KDLVIFNSNDNPV----AQNDAI 74 (310)
30594 T ss_dssp ----CCSEEEEESCSSS------------HHHHHHHHHHHHHHHHTT----------CCEEEEECTTCHH----HHHHHH
30595 T ss_pred ccCCCCEEEEEEecCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEEcCCCCHH----HHHHHH
30596 Confidence 44578999999997642 255677788888887653 3344455443322 223344
30597
30598
30599 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
30600 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
30601 ++++. .+++++|+...+... ......+...++|+|..+...+. .+..+++.+++
30602 T Consensus 75 ~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~------~~~~~~v~~d~ 129 (310)
30603 T 5HSG_A 75 ENYIQ-------------------QGVKGILVAAIDVNGIMPAVKEAAAANIPVIAIDAVLPA------GPQAAQVGVDN 129 (310)
30604 T ss_dssp HHHHH-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCCS------SSCSEEEECCH
30605 T ss_pred HHHHH-------------------cCCCEEEEeCCCccccHHHHHHHHHCCCCEEEEccCCCC------CCcceEEEcCh
30606 Confidence 44332 477877765443322 23445566789999987654331 24566777777
30607
30608
30609 Q NP_000836.2 200 SYQAQAMVDIVTAL------GWNYVSTLAS-EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE- 271 (908)
30610 Q Consensus 200 ~~~~~~~~~~l~~~------~~~~v~ii~~-~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~- 271 (908)
30611 ...++.+++++.+. +.++++++.. ++.++..+.++|++.+++.+...+....... .+..+....+++++.
30612 T Consensus 130 ~~~~~~~~~~l~~~~~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ 207 (310)
30613 T 5HSG_A 130 IEGGRIIGQYFVDYVQKEMGGQARLGIVGALNSAIQNQRQKGFEETLKSNPKITIANVVDGQ--NVQDKAMTAAENLITG 207 (310)
30614 T ss_dssp HHHHHHHHHHHHHHHHHHSTTCEEEEEEECTTCHHHHHHHHHHHHHHTTCTTEEEC-CEECT--TCHHHHHHHHHHHHHH
30615 T ss_pred HHHHHHHHHHHHHHHHHHhCCceEEEEEecCCcHHHHHHHHHHHHHHHhCCCcEEeEeecCC--CCHHHHHHHHHHHHhh
30616 Confidence 77777777776544 7789999875 4455667778888887764213332211111 111233445555542
30617
30618
30619 Q NP_000836.2 272 TPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30620 Q Consensus 272 ~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30621 ..++++|++.. +..+..+++++++.|...++.+++.
30622 T Consensus 208 ~~~~~~i~~~~-~~~a~~~~~~~~~~g~~~~i~v~~~ 243 (310)
30623 T 5HSG_A 208 NPDLTAIYATG-EPALLGAIAAVENQGRQKDIKVFGW 243 (310)
30624 T ss_dssp CTTCCEEEESS-HHHHHHHHHHHHHTTCTTTCEEEEE
30625 T ss_pred CCCcCEEEEcC-chHHHHHHHHHHHCCCCCCeEEEEe
30626 Confidence 12466666553 4456678888887776323444443
30627
30628
30629 No 146
30630 >2O20_B Catabolite control protein A; ccpa, transcriptional regulator, helix-turn-helix, TRANSCRIPTION; HET: SO4; 1.9A {Lactococcus lactis}
30631 Probab=97.51 E-value=8.3e-08 Score=98.76 Aligned_cols=203 Identities=9% Similarity=0.059 Sum_probs=122.1 Template_Neff=11.700
30632
30633 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
30634 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
30635 ..+.++||++.|..+. .++.....+++.++++.+ +++.+.|...++ +...+.++
30636 T Consensus 60 ~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~ 113 (332)
30637 T 2O20_B 60 SKRTTTVGVILPTITS------------TYFAAITRGVDDIASMYK----------YNMILANSDNDV----EKEEKVLE 113 (332)
30638 T ss_dssp ---CCEEEEEESCTTC------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHHH
30639 T ss_pred hCCCCEEEEEeCCCCC------------hhHHHHHHHHHHHHHHcC----------CEEEEEeCCCCH----HHHHHHHH
30640 Confidence 3568899999987542 255677788888777642 234444544332 22333344
30641
30642
30643 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
30644 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
30645 +++. ++++++|+...+... .....+...++|+|..+...+ .++.+.+..++..
30646 T Consensus 114 ~~~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~ 166 (332)
30647 T 2O20_B 114 TFLS-------------------KQVDGIVYMGSSLDE-KIRTSLKNSRTPVVLVGTIDG-------DKEIPSVNIDYHL 166 (332)
30648 T ss_dssp HHHH-------------------TTCSEEEEESSSCCH-HHHHHHHHHTCCEEEESCCCT-------TSCSCEEEECHHH
30649 T ss_pred HHHh-------------------CCCCEEEEeCCCCCH-HHHHHHHhCCCCEEEEcCCCC-------CCCCCEEEeCHHH
30650 Confidence 3332 478888875544332 444556778999998765432 2345666777777
30651
30652
30653 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
30654 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
30655 .++.+++++.+.+.++++++.. ++.++..+.++|++.+++. ++.+..........+..+....+++++. .++|+|+
30656 T Consensus 167 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~i~ 244 (332)
30657 T 2O20_B 167 AAYQSTKKLIDSGNKKIAYIMGSLKDVENTERMVGYQEALLEA-NIEFDENLVFEGNYSYEQGKALAERLLE-RGATSAV 244 (332)
30658 T ss_dssp HHHHHHHHHHHTTCSSEEEECSCTTSHHHHHHHHHHHHHHHHH-TCCCCGGGEECSCCSHHHHHHHHHHHHH-TTCCEEE
30659 T ss_pred HHHHHHHHHHHcCCCcEEEEeCCCCcHHHHHHHHHHHHHHHHC-CCCCCHHHeeccCCCHHHHHHHHHHHHH-cCCCEEE
30660 Confidence 7778888876668889999985 3345667788888888765 3443321111101112234455666653 4788887
30661
30662
30663 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQS 300 (908)
30664 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~ 300 (908)
30665 +.. +..+..+++++++.|+.
30666 T Consensus 245 ~~~-~~~a~~~~~~l~~~g~~ 264 (332)
30667 T 2O20_B 245 VSH-DTVAVGLLSAMMDKGVK 264 (332)
30668 T ss_dssp ESC-HHHHHHHHHHHHHTTCC
30669 T ss_pred ECC-hHHHHHHHHHHHHCCCC
30670 Confidence 654 44566778888887764
30671
30672
30673 No 147
30674 >2O20_F Catabolite control protein A; ccpa, transcriptional regulator, helix-turn-helix, TRANSCRIPTION; HET: SO4; 1.9A {Lactococcus lactis}
30675 Probab=97.51 E-value=8.3e-08 Score=98.76 Aligned_cols=203 Identities=9% Similarity=0.059 Sum_probs=123.3 Template_Neff=11.700
30676
30677 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
30678 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
30679 ..+.++||++.|..+. .++.....+++.++++.+ +++.+.|...++ +...+.++
30680 T Consensus 60 ~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~ 113 (332)
30681 T 2O20_F 60 SKRTTTVGVILPTITS------------TYFAAITRGVDDIASMYK----------YNMILANSDNDV----EKEEKVLE 113 (332)
30682 T ss_dssp -CCCCEEEEEESCTTC------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHHH
30683 T ss_pred hCCCCEEEEEeCCCCC------------hhHHHHHHHHHHHHHHcC----------CEEEEEeCCCCH----HHHHHHHH
30684 Confidence 3568899999987542 255677788888777642 234444544332 22333344
30685
30686
30687 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
30688 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
30689 +++. ++++++|+...+... .....+...++|+|..+...+ .++.+.+..++..
30690 T Consensus 114 ~~~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~ 166 (332)
30691 T 2O20_F 114 TFLS-------------------KQVDGIVYMGSSLDE-KIRTSLKNSRTPVVLVGTIDG-------DKEIPSVNIDYHL 166 (332)
30692 T ss_dssp HHHH-------------------TTCSEEEECSSCCCH-HHHHHHHHHTCCEEEESCCCT-------TSCSCEEEECHHH
30693 T ss_pred HHHh-------------------CCCCEEEEeCCCCCH-HHHHHHHhCCCCEEEEcCCCC-------CCCCCEEEeCHHH
30694 Confidence 3332 478888875544332 444556778999998765432 2345666777777
30695
30696
30697 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
30698 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
30699 .++.+++++.+.+.++++++.. ++.++..+.++|++.+++. ++.+..........+..+....+++++. .++|+|+
30700 T Consensus 167 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~i~ 244 (332)
30701 T 2O20_F 167 AAYQSTKKLIDSGNKKIAYIMGSLKDVENTERMVGYQEALLEA-NIEFDENLVFEGNYSYEQGKALAERLLE-RGATSAV 244 (332)
30702 T ss_dssp HHHHHHHHHHHTTCSSEEEECSCTTSHHHHHHHHHHHHHHHHT-TCCCCGGGEECSCCSHHHHHHHHHHHHH-TTCCEEE
30703 T ss_pred HHHHHHHHHHHcCCCcEEEEeCCCCcHHHHHHHHHHHHHHHHC-CCCCCHHHeeccCCCHHHHHHHHHHHHH-cCCCEEE
30704 Confidence 7778888876668889999985 3345667788888888765 3443321111101112234455666653 4788887
30705
30706
30707 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQS 300 (908)
30708 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~ 300 (908)
30709 +.. +..+..+++++++.|+.
30710 T Consensus 245 ~~~-~~~a~~~~~~l~~~g~~ 264 (332)
30711 T 2O20_F 245 VSH-DTVAVGLLSAMMDKGVK 264 (332)
30712 T ss_dssp ESS-HHHHHHHHHHHHHTTCC
30713 T ss_pred ECC-hHHHHHHHHHHHHCCCC
30714 Confidence 654 44566778888887764
30715
30716
30717 No 148
30718 >4YO7_A Sugar ABC transporter (Sugar-binding protein); ENZYME FUNCTION INITIATIVE, EFI, Structural; HET: INS, MSE; 1.7A {Bacillus halodurans}
30719 Probab=97.51 E-value=8.5e-08 Score=98.37 Aligned_cols=216 Identities=14% Similarity=0.082 Sum_probs=126.6 Template_Neff=11.700
30720
30721 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
30722 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
30723 ...++.++||++.|..+. ++....++++.++++.| + +++.+.|+..++. ...+.
30724 T Consensus 40 ~~~~~~~~Igv~~~~~~~-------------~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~----~~~~~ 93 (326)
30725 T 4YO7_A 40 TGDSGQKVIGVSISNLDE-------------FLTYMQDAMKEEAANYP-------D--FEFIFSDAQNDST----QQMAQ 93 (326)
30726 T ss_dssp CCCCCCEEEEEEESCCCH-------------HHHHHHHHHHHHHTTCT-------T--EEEEEEECTTCHH----HHHHH
30727 T ss_pred cccCCCeEEEEEECCccH-------------HHHHHHHHHHHHHHhCC-------C--CEEEEecCCCCHH----HHHHH
30728 Confidence 456788999999987632 45567778888777754 2 3445555544422 23333
30729
30730
30731 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
30732 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
30733 +++++. ++++++|+...+... ......+...++|+|..+...+. ..++++++.++
30734 T Consensus 94 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~-----~~~~~~~v~~d 149 (326)
30735 T 4YO7_A 94 VENFIS-------------------RNVDAIIVNPVDTTSAVDIVNMVNDAGIPIIIANRTFDG-----VDQATAFVGSE 149 (326)
30736 T ss_dssp HHHHHH-------------------HTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEESCCCTT-----GGGSSEEEECC
30737 T ss_pred HHHHHh-------------------CCCCEEEEcCCCcchhHHHHHHHHHCCCCEEEEccCCCC-----CccccEEEccc
30738 Confidence 443332 467877765443332 24445566789999987654331 13456777777
30739
30740
30741 Q NP_000836.2 199 DSYQAQAMVDIVTA--LGWNYVSTLASE--GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TP 273 (908)
30742 Q Consensus 199 ~~~~~~~~~~~l~~--~~~~~v~ii~~~--~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~ 273 (908)
30743 +...++.+++++.+ .+.++++++..+ ..++..+.+++++.+++.+++++....... .+..+....++++++ ..
30744 T Consensus 150 ~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 227 (326)
30745 T 4YO7_A 150 SIQSGLLQMEEVAKLLNNEGNIAIMDGELGHEAQIMRTEGNKQIIEEHDGLEVVLQGTAK--FDRSEGMRLMENWLNSGT 227 (326)
30746 T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECSTTCHHHHHHHHHHHHHHHTCTTEEEEEEEECT--TCHHHHHHHHHHHHHTTC
30747 T ss_pred hHHHHHHHHHHHHHHhCCCceEEEEECCCCCHHHHHHHHHHHHHHHhCCCeeEEEeccCC--CCHHHHHHHHHHHHHhCC
30748 Confidence 77777788887755 467899999853 235667777888877654223433211111 111233444555542 13
30749
30750
30751 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30752 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30753 ++|+|+... +..+..+++++++.|...++.+++.
30754 T Consensus 228 ~~d~i~~~~-~~~~~~~~~~l~~~g~~~~i~iv~~ 261 (326)
30755 T 4YO7_A 228 EIDAVVANN-DEMALGAILALEAVGKLDDVIVAGI 261 (326)
30756 T ss_dssp CCSEEEESS-HHHHHHHHHHHHHTTCGGGSEEECS
30757 T ss_pred CCCEEEECC-hHHHHHHHHHHHHCCCCCCeEEEEe
30758 Confidence 577776654 4456678888888776323444444
30759
30760
30761 No 149
30762 >6GQ0_A Putative sugar binding protein; Glucose-galactose binding protein, Gebacillus stearothermophilus; 1.94A {Geobacillus stearothermophilus}
30763 Probab=97.49 E-value=9.5e-08 Score=97.65 Aligned_cols=220 Identities=12% Similarity=0.077 Sum_probs=123.4 Template_Neff=11.400
30764
30765 Q NP_000836.2 35 EYAHSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALE 114 (908)
30766 Q Consensus 35 ~~~~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~ 114 (908)
30767 .........++++||++.|..+. .++.....+++.++++.+ +++.+...+. .++ +
30768 T Consensus 20 ~~~~~~~~~~~~~I~vv~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~-~~~----~ 74 (318)
30769 T 6GQ0_A 20 KERVPETTKEAYHFVLVPEELDN------------DYWRLVEKGAKAAAKELG--------VDLEYIGPRQ-ANI----D 74 (318)
30770 T ss_dssp --------CCCCEEEEECSCSSC------------HHHHHHHHHHHHHHHHHT--------CEEEECCCSS-CCH----H
30771 T ss_pred ccCCCCCCCCcEEEEEEeCCCCC------------HHHHHHHHHHHHHHHHhC--------CEEEEECCCc-cCH----H
30772 Confidence 33444567788999999885432 245677788888887753 3444443322 221 1
30773
30774
30775 Q NP_000836.2 115 QSLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSDNTRYDFFS 193 (908)
30776 Q Consensus 115 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~ 193 (908)
30777 ...+.+++++. ++++++|+...+.... .....+...++|+|..+...+. .++++
30778 T Consensus 75 ~~~~~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~ 129 (318)
30779 T 6GQ0_A 75 EHLRILKKAAA-------------------AKVDGIITQGLTEAEFVPVINEITDKNIPVVTIDTDAPT------SRRVA 129 (318)
30780 T ss_dssp HHHHHHHHHHH-------------------TTCSEEEECCCBHHHHHHHHHHHHTTTCCEEEESSCCTT------SCCSE
30781 T ss_pred HHHHHHHHHHH-------------------CCCCEEEECCCCHHHhHHHHHHHHHCCCCEEEEeCCCCc------ccceE
30782 Confidence 22333443332 4788887654433221 3344566679999987654321 24567
30783
30784
30785 Q NP_000836.2 194 RVVPPDSYQAQAMVDIVTA--LGWNYVSTLASEGN--YGESGVEAFTQISRE-IGGVCIAQSQKIPREPRPGEFEKIIKR 268 (908)
30786 Q Consensus 194 ~~~~~~~~~~~~~~~~l~~--~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~ 268 (908)
30787 ++.+++...+..+++++.+ .+.++++++..+.. ++..+.+++++.+++ . ++.+....... .+..+....+.+
30788 T Consensus 130 ~v~~~~~~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~ 206 (318)
30789 T 6GQ0_A 130 YVGTDNYYAGFLAGRALAEDTKGKATVAIITGSLTAAHQQLRVRGFEDAVRQEK-GIRIVAIEESH--ITRVQAAEKAYT 206 (318)
30790 T ss_dssp EEEECHHHHHHHHHHHHHHHTTTCEEEEEEESCSSBHHHHHHHHHHHHHHTTCT-TEEEEEEEECT--TCHHHHHHHHHH
30791 T ss_pred EEEcChHHHHHHHHHHHHHHcCCCcEEEEEECCCCcHHHHHHHHHHHHHHHhcC-CeEEEEEEecC--CCHHHHHHHHHH
30792 Confidence 7777777778888888765 57889999985433 455677777777765 3 34443211111 111223344455
30793
30794
30795 Q NP_000836.2 269 LLET-PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30796 Q Consensus 269 l~~~-~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30797 +++. .++++|++.. +..+..+++++++.|+..++.+++.
30798 T Consensus 207 ~l~~~~~~~~i~~~~-~~~a~~~~~~l~~~g~~~~i~i~~~ 246 (318)
30799 T 6GQ0_A 207 ILKKHPDVNAFYGTS-ALDAIGVAKVVEQFHREQKTYIIGF 246 (318)
30800 T ss_dssp HHHHCTTCCEEEECS-TTHHHHHHHHHHHTTCGGGCEEEEE
30801 T ss_pred HHHHCCCcCEEEEcC-cchHHHHHHHHHHcCCCCCeEEEEe
30802 Confidence 5421 2678876665 3556678888887776323444443
30803
30804
30805 No 150
30806 >6GT9_C Putative sugar binding protein; Glucose-galactose binding protein, Geobacillus stearothermophilus; HET: SO4, GAL; 1.894A {Geobacillus stearothermophilus}
30807 Probab=97.49 E-value=9.5e-08 Score=97.65 Aligned_cols=220 Identities=12% Similarity=0.077 Sum_probs=125.3 Template_Neff=11.400
30808
30809 Q NP_000836.2 35 EYAHSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALE 114 (908)
30810 Q Consensus 35 ~~~~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~ 114 (908)
30811 .........++++||++.|..+. .++.....+++.++++.+ +++.+...+. .++ +
30812 T Consensus 20 ~~~~~~~~~~~~~I~vv~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~-~~~----~ 74 (318)
30813 T 6GT9_C 20 KERVPETTKEAYHFVLVPEELDN------------DYWRLVEKGAKAAAKELG--------VDLEYIGPRQ-ANI----D 74 (318)
30814 T ss_dssp -----CCSTTSCEEEEECSSTTC------------HHHHHHHHHHHHHHHHHT--------CEEEECCCSS-CCH----H
30815 T ss_pred ccCCCCCCCCcEEEEEEeCCCCC------------HHHHHHHHHHHHHHHHhC--------CEEEEECCCc-cCH----H
30816 Confidence 33444567788999999885432 245677788888887753 3444443322 221 1
30817
30818
30819 Q NP_000836.2 115 QSLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSDNTRYDFFS 193 (908)
30820 Q Consensus 115 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~ 193 (908)
30821 ...+.+++++. ++++++|+...+.... .....+...++|+|..+...+. .++++
30822 T Consensus 75 ~~~~~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~ 129 (318)
30823 T 6GT9_C 75 EHLRILKKAAA-------------------AKVDGIITQGLTEAEFVPVINEITDKNIPVVTIDTDAPT------SRRVA 129 (318)
30824 T ss_dssp HHHHHHHHHHH-------------------TTCSEEEECCCCHHHHHHHHHHHHHTTCCEEEESSCCTT------SCCSE
30825 T ss_pred HHHHHHHHHHH-------------------CCCCEEEECCCCHHHhHHHHHHHHHCCCCEEEEeCCCCc------ccceE
30826 Confidence 22333443332 4788887654433221 3344566679999987654321 24567
30827
30828
30829 Q NP_000836.2 194 RVVPPDSYQAQAMVDIVTA--LGWNYVSTLASEGN--YGESGVEAFTQISRE-IGGVCIAQSQKIPREPRPGEFEKIIKR 268 (908)
30830 Q Consensus 194 ~~~~~~~~~~~~~~~~l~~--~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~ 268 (908)
30831 ++.+++...+..+++++.+ .+.++++++..+.. ++..+.+++++.+++ . ++.+....... .+..+....+.+
30832 T Consensus 130 ~v~~~~~~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~ 206 (318)
30833 T 6GT9_C 130 YVGTDNYYAGFLAGRALAEDTKGKATVAIITGSLTAAHQQLRVRGFEDAVRQEK-GIRIVAIEESH--ITRVQAAEKAYT 206 (318)
30834 T ss_dssp EEECCHHHHHHHHHHHHHHHTTTEEEEEEEESCSSCHHHHHHHHHHHHHHTTCT-EEEEEEEEECT--TCHHHHHHHHHH
30835 T ss_pred EEEcChHHHHHHHHHHHHHHcCCCcEEEEEECCCCcHHHHHHHHHHHHHHHhcC-CeEEEEEEecC--CCHHHHHHHHHH
30836 Confidence 7777777778888888765 57889999985433 455677777777765 3 34443211111 111223344455
30837
30838
30839 Q NP_000836.2 269 LLET-PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30840 Q Consensus 269 l~~~-~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30841 +++. .++++|++.. +..+..+++++++.|+..++.+++.
30842 T Consensus 207 ~l~~~~~~~~i~~~~-~~~a~~~~~~l~~~g~~~~i~i~~~ 246 (318)
30843 T 6GT9_C 207 ILKKHPDVNAFYGTS-ALDAIGVAKVVEQFHREQKTYIIGF 246 (318)
30844 T ss_dssp HHHHCTTCCEEEECS-TTHHHHHHHHHHHHCCSSCCEEEEE
30845 T ss_pred HHHHCCCcCEEEEcC-cchHHHHHHHHHHcCCCCCeEEEEe
30846 Confidence 5421 2678876665 3556678888887776323444443
30847
30848
30849 No 151
30850 >1GUB_A D-ALLOSE-BINDING PERIPLASMIC PROTEIN; SUGAR-BINDING PROTEIN, PERIPLASMIC BINDING PROTEIN; 3.1A {ESCHERICHIA COLI} SCOP: c.93.1.1
30851 Probab=97.48 E-value=1e-07 Score=95.59 Aligned_cols=218 Identities=11% Similarity=0.073 Sum_probs=124.4 Template_Neff=12.200
30852
30853 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
30854 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
30855 +++||++.|..+. .++.....+++.++++. |+++.+...|+..++. ...+.++++.
30856 T Consensus 1 ~i~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~----~~~~~~~~l~ 56 (288)
30857 T 1GUB_A 1 AAEYAVVLKTLSN------------PFWVDMKKGIEDEAKTL--------GVSVDIFASPSEGDFQ----SQLQLFEDLS 56 (288)
30858 T ss_dssp CCSEEEEESCSSS------------HHHHHHHHHHHHHHHHH--------TCCEEEEECSSTTCHH----HHHHHHHHHH
30859 T ss_pred CceEEEEEccCCC------------HHHHHHHHHHHHHHHHh--------CCEEEEEcCCCCCCHH----HHHHHHHHHH
30860 Confidence 4789999987542 25567778888888775 3455555554333321 2233344333
30861
30862
30863 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSD-NTRYDFFSRVVPPDSYQ 202 (908)
30864 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~-~~~~~~~~~~~~~~~~~ 202 (908)
30865 . ++++++|+...+.... .....+...++|+|..+...+.... ....++++++.+++...
30866 T Consensus 57 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 117 (288)
30867 T 1GUB_A 57 N-------------------KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 117 (288)
30868 T ss_dssp T-------------------SCCSEEEECCSSTTTTHHHHHHHHHHTCEEEEESSCCCHHHHHHHTCCCSEEEECCHHHH
30869 T ss_pred c-------------------CCCCEEEEecCCcccchHHHHHHHHCCCeEEEECCCCChHHHhhcCCceEEEEecChHHH
30870 Confidence 2 4788777654433221 3345566789999987764431100 00135667788888777
30871
30872
30873 Q NP_000836.2 203 AQAMVDIVTAL-GW--NYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNAR 276 (908)
30874 Q Consensus 203 ~~~~~~~l~~~-~~--~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 276 (908)
30875 ++.+++++.+. +. +++++++. ++.++..+.+++++.+++.+.+.+....... .+..+....++++++. .+++
30876 T Consensus 118 ~~~~~~~l~~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (288)
30877 T 1GUB_A 118 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD--WDRIKALDVATNVLQRNPNIK 195 (288)
30878 T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCCSSCHHHHHHHHHHHHHHHHCTTEEEEEEECCC--SCHHHHHHHHHHHHHHCTTEE
30879 T ss_pred HHHHHHHHHHHHhhCCceEEEEEcCCCCccHHHHHHHHHHHHHhcCCcEEeeccCCC--CcHHHHHHHHHHHHHHCCCcC
30880 Confidence 88888887553 66 88999985 3345667778888887764213332211111 1112334445555421 2466
30881
30882
30883 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30884 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30885 +|++.. +..+..+++++++.|+..++.+++.
30886 T Consensus 196 ~i~~~~-~~~~~~~~~~~~~~g~~~~~~i~~~ 226 (288)
30887 T 1GUB_A 196 AIYCAN-DTMAMGVAQAVANAGKTGKVLVVGT 226 (288)
30888 T ss_dssp EEEESS-HHHHHHHHHHHHHHTCBTTBEEEEE
30889 T ss_pred EEEECC-cccHHHHHHHHHHcCCCCCeEEEEe
30890 Confidence 676654 4456678888888776323444444
30891
30892
30893 No 152
30894 >1GUD_B D-ALLOSE-BINDING PERIPLASMIC PROTEIN; PERIPLASMIC BINDING PROTEIN, ALLOSE, HINGE; 1.71A {ESCHERICHIA COLI} SCOP: c.93.1.1
30895 Probab=97.48 E-value=1e-07 Score=95.59 Aligned_cols=218 Identities=11% Similarity=0.073 Sum_probs=124.4 Template_Neff=12.200
30896
30897 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
30898 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
30899 +++||++.|..+. .++.....+++.++++. |+++.+...|+..++. ...+.++++.
30900 T Consensus 1 ~i~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~----~~~~~~~~l~ 56 (288)
30901 T 1GUD_B 1 AAEYAVVLKTLSN------------PFWVDMKKGIEDEAKTL--------GVSVDIFASPSEGDFQ----SQLQLFEDLS 56 (288)
30902 T ss_dssp CCEEEEECSCSSS------------HHHHHHHHHHHHHHHHH--------TCEEEEECCSSTTCHH----HHHHHHHHHH
30903 T ss_pred CceEEEEEccCCC------------HHHHHHHHHHHHHHHHh--------CCEEEEEcCCCCCCHH----HHHHHHHHHH
30904 Confidence 4789999987542 25567778888888775 3455555554333321 2233344333
30905
30906
30907 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSD-NTRYDFFSRVVPPDSYQ 202 (908)
30908 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~-~~~~~~~~~~~~~~~~~ 202 (908)
30909 . ++++++|+...+.... .....+...++|+|..+...+.... ....++++++.+++...
30910 T Consensus 57 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 117 (288)
30911 T 1GUD_B 57 N-------------------KNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAV 117 (288)
30912 T ss_dssp T-------------------TCCSEEEECCSSSSTTHHHHHHHHHTTCEEEEESSCCCHHHHHHTTCCCSEEEECCHHHH
30913 T ss_pred c-------------------CCCCEEEEecCCcccchHHHHHHHHCCCeEEEECCCCChHHHhhcCCceEEEEecChHHH
30914 Confidence 2 4788777654433221 3345566789999987764431100 00135667788888777
30915
30916
30917 Q NP_000836.2 203 AQAMVDIVTAL-GW--NYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNAR 276 (908)
30918 Q Consensus 203 ~~~~~~~l~~~-~~--~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 276 (908)
30919 ++.+++++.+. +. +++++++. ++.++..+.+++++.+++.+.+.+....... .+..+....++++++. .+++
30920 T Consensus 118 ~~~~~~~l~~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (288)
30921 T 1GUD_B 118 GAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPAD--WDRIKALDVATNVLQRNPNIK 195 (288)
30922 T ss_dssp HHHHHHHHHHHHTTTCEEEEEEECSTTCHHHHHHHHHHHHHHHTCTTEEEEEEEECT--TCHHHHHHHHHHHHHHCTTEE
30923 T ss_pred HHHHHHHHHHHHhhCCceEEEEEcCCCCccHHHHHHHHHHHHHhcCCcEEeeccCCC--CcHHHHHHHHHHHHHHCCCcC
30924 Confidence 88888887553 66 88999985 3345667778888887764213332211111 1112334445555421 2466
30925
30926
30927 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
30928 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
30929 +|++.. +..+..+++++++.|+..++.+++.
30930 T Consensus 196 ~i~~~~-~~~~~~~~~~~~~~g~~~~~~i~~~ 226 (288)
30931 T 1GUD_B 196 AIYCAN-DTMAMGVAQAVANAGKTGKVLVVGT 226 (288)
30932 T ss_dssp EEEESS-HHHHHHHHHHHHHTTCBTTBEEEEE
30933 T ss_pred EEEECC-cccHHHHHHHHHHcCCCCCeEEEEe
30934 Confidence 676654 4456678888888776323444444
30935
30936
30937 No 153
30938 >1DBQ_B PURINE REPRESSOR; TRANSCRIPTION REGULATION, DNA-BINDING REGULATORY PROTEIN; 2.2A {Escherichia coli} SCOP: c.93.1.1
30939 Probab=97.47 E-value=1.1e-07 Score=95.41 Aligned_cols=205 Identities=14% Similarity=0.122 Sum_probs=114.3 Template_Neff=12.200
30940
30941 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
30942 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
30943 .++.++||++.|..+. .++.....+++.++++.+ +++.+.|+..++ +...+.++
30944 T Consensus 4 ~~~~~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~----~~~~~~~~ 57 (289)
30945 T 1DBQ_B 4 VNHTKSIGLLATSSEA------------AYFAEIIEAVEKNCFQKG----------YTLILGNAWNNL----EKQRAYLS 57 (289)
30946 T ss_dssp ----CEEEEEESCSSC------------TTTTHHHHHHHHHHHHTT----------CEEEEEECSSCT----THHHHHHH
30947 T ss_pred cCCccEEEEEcCCCcc------------hHHHHHHHHHHHHHHHhC----------CeEEEEecCCCH----HHHHHHHH
30948 Confidence 4567899999987542 245567777777776542 334445544332 22233344
30949
30950
30951 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILR-LFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
30952 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~-~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
30953 +++. .+++++|+...+... .....+. ..++|+|..+...+. .++.+++.+++.
30954 T Consensus 58 ~l~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~~ip~v~~~~~~~~------~~~~~~v~~~~~ 111 (289)
30955 T 1DBQ_B 58 MMAQ-------------------KRVDGLLVMCSEYPE-PLLAMLEEYRHIPMVVMDWGEAK------ADFTDAVIDNAF 111 (289)
30956 T ss_dssp HHHH-------------------TTCSCCCEECSCCCH-HHHHHHHHTTTSCCCEEEESCCC------SSSCEEEECCHH
30957 T ss_pred HHHh-------------------cCCCEEEEecCCCCH-HHHHHHHHhCCCCEEEecCCCCC------CCCCcEEEeCHH
30958 Confidence 3332 478888875443322 2223333 479999987654321 234456667766
30959
30960
30961 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
30962 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
30963 ..++.+++++.+.+.++++++.. +..++..+.++|.+.+++. ++.+........+.+..+....++++++. .++++
30964 T Consensus 112 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (289)
30965 T 1DBQ_B 112 EGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEA-MIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTA 190 (289)
30966 T ss_dssp HHHHHHHHHHHHTTCCSEEEECCC------CHHHHHHHHHHHHH-TCCCCGGGBCCCCSSHHHHHHHHHHHHSSSSCCSE
30967 T ss_pred HHHHHHHHHHHHCCCCcEEEEeCCCcccchHHHHHHHHHHHHHC-CCCCCHHHeeecCCChHHHHHHHHHHHcCCCCCCE
30968 Confidence 77788888887668889999985 3345667778888887765 34443211111001112334445555431 24677
30969
30970
30971 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
30972 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
30973 |++.. +..+..+++++++.|+.
30974 T Consensus 191 v~~~~-~~~a~~~~~~l~~~g~~ 212 (289)
30975 T 1DBQ_B 191 VFCGG-DIMAMGALCAADEMGLR 212 (289)
30976 T ss_dssp EEESC-HHHHHHHHHHHHHHTCC
30977 T ss_pred EEECC-HHHHHHHHHHHHHcCCC
30978 Confidence 76654 33566778888877764
30979
30980
30981 No 154
30982 >4RK0_D LacI family sugar-binding transcriptional regulator; sugar binding, transcription regulation, Enzyme; HET: RIB; 1.8A {Enterococcus faecalis V583}
30983 Probab=97.45 E-value=1.2e-07 Score=94.24 Aligned_cols=198 Identities=12% Similarity=0.122 Sum_probs=121.1 Template_Neff=12.100
30984
30985 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
30986 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
30987 ..+.++||++.|..+. .++..+..+++.++++. | +++.+.|+..++. ...+.++
30988 T Consensus 4 ~~~~~~I~~~~~~~~~------------~~~~~~~~g~~~~~~~~--------~--~~~~~~~~~~~~~----~~~~~~~ 57 (274)
30989 T 4RK0_D 4 MKKSKTIGVIVPDITN------------PFFAQLIRGIESVLYKE--------N--FILILCNADQDVT----REHEYLT 57 (274)
30990 T ss_dssp --CCEEEEEEESCTTS------------HHHHHHHHHHHHHHTTT--------T--EEEEEEEGGGCCS----TTCHHHH
30991 T ss_pred CCCCCEEEEEeCCCCC------------HHHHHHHHHHHHHHHHC--------C--CEEEEEeCCCChH----HHHHHHH
30992 Confidence 4567899999987542 25667788888887764 2 3445555543322 2333444
30993
30994
30995 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
30996 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
30997 +++. .++|++|+...+.....+...+...++|+|..+...+ .++.+++.+++..
30998 T Consensus 58 ~~~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~-------~~~~~~v~~d~~~ 111 (274)
30999 T 4RK0_D 58 ELIR-------------------RSVDGFVIASSEISNQTINETLRAKKIPFIVLDQKKA-------EGFSDAVLTDDYR 111 (274)
31000 T ss_dssp HHHT-------------------SCCSEEEECCTTSCHHHCCCCCCHHTCCEEEETTSCC-------CSSSEEEEECHHH
31001 T ss_pred HHHH-------------------cCCCEEEEeCcccCchHHHHHHHHCCCCEEEEcCCCC-------CCCCcEEEechHH
31002 Confidence 4332 4788888765544333444556778999998765432 1356677788877
31003
31004
31005 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
31006 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
31007 .++.+++++.+.+.++++++..+.. ++..+.++|++.+++. +..+.. .+. ..+....+++++. .++|+|+
31008 T Consensus 112 ~~~~~~~~l~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~----~~~~~~~~~~~~~-~~~~~i~ 183 (274)
31009 T 4RK0_D 112 GGQLAAKHLQEQRHEQVIVVMPPHAPVNIQQRLKGFCSVYTEK-VQLIET--ELS----KTGGYQAVPEILK-TESTGIF 183 (274)
31010 T ss_dssp HHHHHHHHHHHTTCCSEEEEECSSCCHHHHHHHHHHHTTCCSS-EEEEEC--CSS----HHHHHHHHHHHHT-SCCCEEE
31011 T ss_pred HHHHHHHHHHHCCCCeEEEeCCCCCchHHHHHHHHHHHHHHhc-cceecc--ccc----ccchhhHHHHHHh-cCCCEEE
31012 Confidence 8888888886666788999885433 5566777888777664 222111 111 1123344555553 3788887
31013
31014
31015 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQS 300 (908)
31016 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~ 300 (908)
31017 +.. +..+..+++++++.|+.
31018 T Consensus 184 ~~~-~~~~~~~~~~~~~~g~~ 203 (274)
31019 T 4RK0_D 184 AIN-DEIAFGLYRGLAEAGKK 203 (274)
31020 T ss_dssp ESS-HHHHHHHHHHHHHTTCC
31021 T ss_pred EcC-hHHHHHHHHHHHHcCCC
31022 Confidence 764 33466788888877764
31023
31024
31025 No 155
31026 >3DBI_A SUGAR-BINDING TRANSCRIPTIONAL REGULATOR, LACI FAMILY; STRUCTURAL GENOMICS, SUGAR-BINDING TRANSCRIPTIONAL REGULATOR; HET: MSE, PO4; 2.45A {Escherichia coli K12}
31027 Probab=97.45 E-value=1.3e-07 Score=97.60 Aligned_cols=207 Identities=10% Similarity=0.026 Sum_probs=121.5 Template_Neff=11.800
31028
31029 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
31030 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
31031 ..++++||++.|..+.. ..++.....+++.++++.+ +++.+.|+..++ +...+.++
31032 T Consensus 58 ~~~~~~Ig~i~~~~~~~----------~~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~ 113 (338)
31033 T 3DBI_A 58 AKSTQTLGLVVTNTLYH----------GIYFSELLFHAARMAEEKG----------RQLLLADGKHSA----EEERQAIQ 113 (338)
31034 T ss_dssp --CCSEEEEEECTTTTS----------TTHHHHHHHHHHHHHHHTT----------CEEEEEECTTSH----HHHHHHHH
31035 T ss_pred cCCCCeEEEEecCcccc----------CccHHHHHHHHHHHHHHcC----------CEEEEEcCCCCH----HHHHHHHH
31036 Confidence 35688999999976421 1255667778887777642 344455554442 22333444
31037
31038
31039 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
31040 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
31041 +++. .+++++|+...+.....+...++..++|+|.++...+. +..+.+..++..
31042 T Consensus 114 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-------~~~~~v~~~~~~ 167 (338)
31043 T 3DBI_A 114 YLLD-------------------LRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRK-------NSSHSVWCDHKQ 167 (338)
31044 T ss_dssp HHHH-------------------TTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESSCCSS-------SGGGEECBCHHH
31045 T ss_pred HHHh-------------------cCCCEEEEeCCCCChHHHHHHHHhcCCCEEEECCCCCC-------CCCcEEEeCCHH
31046 Confidence 4432 47888887654433334445566789999987754321 234555666666
31047
31048
31049 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAV 278 (908)
31050 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vi 278 (908)
31051 .+..+++++.+.+.++++++..+.. ++..+.++|++.+++. ++.+.....+..+.+..+..+.+++++. ..++|+|
31052 T Consensus 168 ~~~~~~~~l~~~g~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 246 (338)
31053 T 3DBI_A 168 TSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQH-GIALNEKLIANGKWTPASGAEGVEMLLERGAKFSAL 246 (338)
31054 T ss_dssp HHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHHT-TCCCCGGGEECCCSSHHHHHHHHHHHHHTTCCCSEE
31055 T ss_pred HHHHHHHHHHHCCCCcEEEEecCCCCchHHHHHHHHHHHHHHC-CCCCCHHHeecCCCChHHHHHHHHHHHHCCCCCCEE
31056 Confidence 6777777776668889999986443 5667778888888765 3444321111100112233444555542 1247777
31057
31058
31059 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
31060 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
31061 ++.. +..+..+++++++.|+.
31062 T Consensus 247 ~~~~-~~~a~~~~~~l~~~g~~ 267 (338)
31063 T 3DBI_A 247 VASN-DDMAIGAMKALHERGVA 267 (338)
31064 T ss_dssp EESS-HHHHHHHHHHHHHTTCC
31065 T ss_pred EECC-HHHHHHHHHHHHHCCCC
31066 Confidence 7664 44567778888887764
31067
31068
31069 No 156
31070 >3DBI_C SUGAR-BINDING TRANSCRIPTIONAL REGULATOR, LACI FAMILY; STRUCTURAL GENOMICS, SUGAR-BINDING TRANSCRIPTIONAL REGULATOR; HET: MSE, PO4; 2.45A {Escherichia coli K12}
31071 Probab=97.45 E-value=1.3e-07 Score=97.60 Aligned_cols=207 Identities=10% Similarity=0.026 Sum_probs=121.5 Template_Neff=11.800
31072
31073 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
31074 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
31075 ..++++||++.|..+.. ..++.....+++.++++.+ +++.+.|+..++ +...+.++
31076 T Consensus 58 ~~~~~~Ig~i~~~~~~~----------~~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~ 113 (338)
31077 T 3DBI_C 58 AKSTQTLGLVVTNTLYH----------GIYFSELLFHAARMAEEKG----------RQLLLADGKHSA----EEERQAIQ 113 (338)
31078 T ss_dssp --CCSEEEEEECTTTTS----------SSHHHHHHHHHHHHHHHTT----------CEEEEEECTTSH----HHHHHHHH
31079 T ss_pred cCCCCeEEEEecCcccc----------CccHHHHHHHHHHHHHHcC----------CEEEEEcCCCCH----HHHHHHHH
31080 Confidence 35688999999976421 1255667778887777642 344455554442 22333444
31081
31082
31083 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
31084 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
31085 +++. .+++++|+...+.....+...++..++|+|.++...+. +..+.+..++..
31086 T Consensus 114 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-------~~~~~v~~~~~~ 167 (338)
31087 T 3DBI_C 114 YLLD-------------------LRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRK-------NSSHSVWCDHKQ 167 (338)
31088 T ss_dssp HHHH-------------------TTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESSCCSS-------SGGGEECBCHHH
31089 T ss_pred HHHh-------------------cCCCEEEEeCCCCChHHHHHHHHhcCCCEEEECCCCCC-------CCCcEEEeCCHH
31090 Confidence 4432 47888887654433334445566789999987754321 234555666666
31091
31092
31093 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAV 278 (908)
31094 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vi 278 (908)
31095 .+..+++++.+.+.++++++..+.. ++..+.++|++.+++. ++.+.....+..+.+..+..+.+++++. ..++|+|
31096 T Consensus 168 ~~~~~~~~l~~~g~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 246 (338)
31097 T 3DBI_C 168 TSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQH-GIALNEKLIANGKWTPASGAEGVEMLLERGAKFSAL 246 (338)
31098 T ss_dssp HHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHHT-TCCCCGGGEECCCSSHHHHHHHHHHHHHTTCCCSEE
31099 T ss_pred HHHHHHHHHHHCCCCcEEEEecCCCCchHHHHHHHHHHHHHHC-CCCCCHHHeecCCCChHHHHHHHHHHHHCCCCCCEE
31100 Confidence 6777777776668889999986443 5667778888888765 3444321111100112233444555542 1247777
31101
31102
31103 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
31104 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
31105 ++.. +..+..+++++++.|+.
31106 T Consensus 247 ~~~~-~~~a~~~~~~l~~~g~~ 267 (338)
31107 T 3DBI_C 247 VASN-DDMAIGAMKALHERGVA 267 (338)
31108 T ss_dssp EESS-HHHHHHHHHHHHHTTCC
31109 T ss_pred EECC-HHHHHHHHHHHHHCCCC
31110 Confidence 7664 44567778888887764
31111
31112
31113 No 157
31114 >3EGC_F putative ribose operon repressor; STRUCTURAL GENOMICS, UNKNOWN FUNCTION, DNA-binding; 2.35A {Burkholderia thailandensis}
31115 Probab=97.42 E-value=1.5e-07 Score=94.64 Aligned_cols=205 Identities=11% Similarity=0.054 Sum_probs=119.7 Template_Neff=11.700
31116
31117 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
31118 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
31119 ..++.++||++.|..+. .++.....+++.++++.+ +++.+.++..++. ...+.+
31120 T Consensus 4 ~~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~~----~~~~~~ 57 (291)
31121 T 3EGC_F 4 RSKRSNVVGLIVSDIEN------------VFFAEVASGVESEARHKG----------YSVLLANTAEDIV----REREAV 57 (291)
31122 T ss_dssp ---CCCEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCHH----HHHHHH
31123 T ss_pred cCCCCcEEEEEEcCccc------------HHHHHHHHHHHHHHHHcC----------CeEEEEECCCCHH----HHHHHH
31124 Confidence 34578999999987542 256677888888887753 2344445433321 223334
31125
31126
31127 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
31128 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
31129 ++++. .+++++|+...+.. ......+...++|+|..+...+ .++.+.+.++..
31130 T Consensus 58 ~~l~~-------------------~~~d~ii~~~~~~~-~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~ 110 (291)
31131 T 3EGC_F 58 GQFFE-------------------RRVDGLILAPSEGE-HDYLRTELPKTFPIVAVNRELR-------IPGCGAVLSENV 110 (291)
31132 T ss_dssp HHHHH-------------------TTCSEEEECCCSSC-CHHHHHSSCTTSCEEEESSCCC-------CTTCEEEEECHH
31133 T ss_pred HHHHH-------------------cCCCEEEEeCCCCC-hHHHHhhcCCCCCEEEECCCCC-------CCCCcEEEeCcH
31134 Confidence 43332 47888887654433 3344556678999998776433 134667777777
31135
31136
31137 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARA 277 (908)
31138 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
31139 ..++.+++++.+.+.++++++.. ++.....+.++|++.+++. ++++........+.+..+....+++++. ..++++
31140 T Consensus 111 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 189 (291)
31141 T 3EGC_F 111 RGARTAVEYLIARGHTRIGAIVGSAGLMTSRERLKGFRAAMSAA-GLPVRQEWIAAGGVRADNGRDGAIKVLTGADRPTA 189 (291)
31142 T ss_dssp HHHHHHHHHHHHTTCCSEEEECSSTTSHHHHHHHHHHHHHHHHT-TCCCCGGGEEC------CCHHHHHHHHTSTTCCSE
31143 T ss_pred HHHHHHHHHHHHCCCCcEEEEeCCCCcccHHHHHHHHHHHHHHc-CCCCChheEeecCCchhhHHHHHHHHHhCCCCCCE
31144 Confidence 77778888876668889999985 3345566778888888765 3443321111100111122334444432 135777
31145
31146
31147 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
31148 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
31149 |++.. +..+..+++++++.|+.
31150 T Consensus 190 i~~~~-~~~a~~~~~~l~~~g~~ 211 (291)
31151 T 3EGC_F 190 LLTSS-HRITEGAMQALNVLGLR 211 (291)
31152 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
31153 T ss_pred EEECC-HHHHHHHHHHHHHcCCC
31154 Confidence 77664 44466777888877764
31155
31156
31157 No 158
31158 >4KZK_A L-arabinose-binding protein; L-arabinose, BETA-D-GALACTOSE, ABC transporter, periplasmic; HET: GAL; 1.5A {Burkholderia thailandensis}
31159 Probab=97.41 E-value=1.6e-07 Score=96.80 Aligned_cols=218 Identities=11% Similarity=0.069 Sum_probs=122.1 Template_Neff=11.900
31160
31161 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
31162 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
31163 ....+.++||++.|..+. .++.....+++.++++.+ +++.+.|+ .++ +...+.
31164 T Consensus 31 ~~~~~~~~Ig~~~~~~~~------------~~~~~~~~~~~~a~~~~~----------~~~~~~~~-~~~----~~~~~~ 83 (337)
31165 T 4KZK_A 31 AQGAAPVKIGFVVKQPDD------------PWFQDEWRFAEQAAKDKH----------FTLVKIAA-PSG----EKVSTA 83 (337)
31166 T ss_dssp ------CEEEEEESCTTS------------HHHHHHHHHHHHHHHHHT----------CEEEEEEC-CSH----HHHHHH
31167 T ss_pred hcCCCCeEEEEEECCCCC------------HHHHHHHHHHHHHHHHcC----------CEEEEEeC-CCH----HHHHHH
31168 Confidence 455678999999985432 245667778888877652 33444454 332 222333
31169
31170
31171 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
31172 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
31173 +++++. ++++++|+...+.. .......+...++|+|.++...+.... ...++++++.++
31174 T Consensus 84 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~~-~~~~~~~~v~~d 143 (337)
31175 T 4KZK_A 84 LDSLAA-------------------QKAQGVIICAPDVKLGPGIAAKAKRYGMKLMSVDDQLVDGRG-APLADVPHMGIS 143 (337)
31176 T ss_dssp HHHHHH-------------------TTCSEEEEECSSGGGHHHHHHHHHHTTCEEEEESSCCBCTTS-CBCTTSCEEEEC
31177 T ss_pred HHHHHh-------------------cCCCEEEEcCCCCcccHHHHHHHHHcCCEEEEEecCCCCCCC-CCcccCcEEecC
31178 Confidence 443332 47787776544332 233445667789999988765432111 113567777788
31179
31180
31181 Q NP_000836.2 199 DSYQAQAMVDIVTA----LGWN--YVSTLASE---GNYGESGVEAFTQISREIGGVC---IAQSQKIPREPRPGEFEKII 266 (908)
31182 Q Consensus 199 ~~~~~~~~~~~l~~----~~~~--~v~ii~~~---~~~~~~~~~~~~~~~~~~~~i~---v~~~~~~~~~~~~~~~~~~~ 266 (908)
31183 +...++.+++++.+ .+++ +++++..+ +.++..+.++|++.+++. +.. +....... .+..+....+
31184 T Consensus 144 ~~~~~~~~~~~l~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~--~~~~~~~~~~ 220 (337)
31185 T 4KZK_A 144 AYRIGRQVGDAIAAEAKRRGWNPAEVGVLRLAYDQLPTARERTTGAVDALKAA-GFAAANVVDAPEMT--ADTEGAFNAA 220 (337)
31186 T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEECTTSHHHHHHHHHHHHHHHHT-TCCGGGEEEEECSS--SSHHHHHHHH
31187 T ss_pred HHHHHHHHHHHHHHHHHHcCCCCccEEEEEecCCCChHHHHHHHHHHHHHHHc-CCccceeeccccCC--CCHHHHHHHH
31188 Confidence 77778888887754 4666 89998754 456667788888888765 333 22111111 1122344555
31189
31190
31191 Q NP_000836.2 267 KRLLETPNARA---VIMFANEDDIRRILEAAKKLNQSG-HFLWIGS 308 (908)
31192 Q Consensus 267 ~~l~~~~~~~v---iv~~~~~~~~~~~l~~~~~~g~~~-~~~~i~~ 308 (908)
31193 +++++ .+++. +++..++..+..+++++++.|+.. ++.+++.
31194 T Consensus 221 ~~~~~-~~~~~~~~~i~~~~~~~a~~~~~~l~~~g~~~~~i~i~g~ 265 (337)
31195 T 4KZK_A 221 NIAFT-KHRNFRHWVAFGSNDDTTVGAVRAGEGRGIGTDDMIAVGI 265 (337)
31196 T ss_dssp HHHHH-HCTTCSSEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEE
31197 T ss_pred HHHHH-hCCCCCeEEEEecChHHHHHHHHHHHHcCCCCCCeEEEEe
31198 Confidence 66653 34443 233334555677888888877631 3444443
31199
31200
31201 No 159
31202 >3O1I_C Sensor protein TorS (E.C.2.7.13.3), Periplasmic; Ligand free, Two component sensor; HET: PE4; 2.8A {Vibrio parahaemolyticus}
31203 Probab=97.41 E-value=1.6e-07 Score=95.14 Aligned_cols=216 Identities=7% Similarity=-0.002 Sum_probs=120.4 Template_Neff=11.800
31204
31205 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
31206 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
31207 +++++||++.|.... ..+..+..+++.++++.+ +++.+...|...++. ...+.+++
31208 T Consensus 3 ~~~~~Ig~~~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~~~~~~----~~~~~~~~ 58 (304)
31209 T 3O1I_C 3 GSDEKICAIYPHLKD------------SYWLSVNYGMVSEAEKQG--------VNLRVLEAGGYPNKS----RQEQQLAL 58 (304)
31210 T ss_dssp --CCEEEEEESCSCS------------HHHHHHHHHHHHHHHHHT--------CEEEEEECSSTTCHH----HHHHHHHH
31211 T ss_pred CCCceEEEEEccCCC------------hHHHHHHHHHHHHHHHcC--------CEEEEEcCCCCCCHH----HHHHHHHH
31212 Confidence 467899999987432 245677788888888753 455555444322321 22233443
31213
31214
31215 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
31216 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
31217 ++. ++++++|+...+.. .......+. .++|+|..+...+... ....++.+++.++...
31218 T Consensus 59 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~-~~ipvv~~~~~~~~~~-~~~~~~~~~v~~d~~~ 117 (304)
31219 T 3O1I_C 59 CTQ-------------------WGANAIILGTVDPHAYEHNLKSWV-GNTPVFATVNQLDLDE-EQSTLLKGEVGVDWYW 117 (304)
31220 T ss_dssp HHH-------------------HTCSEEEECCSSTTSSTTTHHHHT-TTSCEEECSSCCCCCT-TTGGGEEEECCCCHHH
31221 T ss_pred HHH-------------------hCCCEEEEcCCCHHhHHHHHHHHh-cCCCEEEEecCCCCCh-HHhhcceEEEEcChHH
31222 Confidence 332 47888877543322 223334455 6999988765433211 0113567788888877
31223
31224
31225 Q NP_000836.2 202 QAQAMVDIVTAL-----GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPN 274 (908)
31226 Q Consensus 202 ~~~~~~~~l~~~-----~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (908)
31227 .++.+++++.+. +.++++++.. +..++..+.+++++.+++. ++++....... ....+....++++++..+
31228 T Consensus 118 ~~~~~~~~l~~~~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 194 (304)
31229 T 3O1I_C 118 MGYEAGKYLAERHPKGSGKTNIALLLGPRTRGGTKPVTTGFYEAIKNS-DIHIVDSFWAD--NDKELQRNLVQRVIDMGN 194 (304)
31230 T ss_dssp HHHHHHHHHHTTSBTTTCCEEEEEECCCC-----CHHHHHHHHTTTTB-TEEEEECCCCC--SCHHHHHHHHHHHHHHSC
31231 T ss_pred HHHHHHHHHHHHCCCCCCCeEEEEEeCCCCCCcchHHHHHHHHHHhcC-CcEEeeeeecC--CCHHHHHHHHHHHHHcCC
31232 Confidence 788888887554 6678999985 3335667788888888764 35443221111 111233344555542235
31233
31234
31235 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
31236 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
31237 +++|+.. ++ .+..+++++++.|+..++.+++.
31238 T Consensus 195 ~~~i~~~-~~-~~~~~~~~~~~~g~~~~~~v~~~ 226 (304)
31239 T 3O1I_C 195 IDYIVGS-AV-AIEAAISELRSADKTHDIGLVSV 226 (304)
31240 T ss_dssp CSEEEEC-HH-HHHHHHHHHTTTTCGGGSEEBCS
31241 T ss_pred CCEEEEc-ch-HHHHHHHHHHHCCCCCCeEEEEE
31242 Confidence 6666554 33 56778888887776323444443
31243
31244
31245 No 160
31246 >3O1I_D Sensor protein TorS (E.C.2.7.13.3), Periplasmic; Ligand free, Two component sensor; HET: PE4; 2.8A {Vibrio parahaemolyticus}
31247 Probab=97.41 E-value=1.6e-07 Score=95.14 Aligned_cols=216 Identities=7% Similarity=-0.002 Sum_probs=122.7 Template_Neff=11.800
31248
31249 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
31250 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
31251 +++++||++.|.... ..+..+..+++.++++.+ +++.+...|...++. ...+.+++
31252 T Consensus 3 ~~~~~Ig~~~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~~~~~~----~~~~~~~~ 58 (304)
31253 T 3O1I_D 3 GSDEKICAIYPHLKD------------SYWLSVNYGMVSEAEKQG--------VNLRVLEAGGYPNKS----RQEQQLAL 58 (304)
31254 T ss_dssp --CCEEEEEESCSCS------------HHHHHHHHHHHHHHHTTT--------CEEEEEECSSTTCHH----HHHHHHHH
31255 T ss_pred CCCceEEEEEccCCC------------hHHHHHHHHHHHHHHHcC--------CEEEEEcCCCCCCHH----HHHHHHHH
31256 Confidence 467899999987432 245677788888888753 455555444322321 22233443
31257
31258
31259 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
31260 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
31261 ++. ++++++|+...+.. .......+. .++|+|..+...+... ....++.+++.++...
31262 T Consensus 59 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~-~~ipvv~~~~~~~~~~-~~~~~~~~~v~~d~~~ 117 (304)
31263 T 3O1I_D 59 CTQ-------------------WGANAIILGTVDPHAYEHNLKSWV-GNTPVFATVNQLDLDE-EQSTLLKGEVGVDWYW 117 (304)
31264 T ss_dssp HHH-------------------HTCSEEEECCSCGGGSTTTTHHHH-TTCCEEECSSCCCCCT-TGGGGEEEECCCCTHH
31265 T ss_pred HHH-------------------hCCCEEEEcCCCHHhHHHHHHHHh-cCCCEEEEecCCCCCh-HHhhcceEEEEcChHH
31266 Confidence 332 47888877543322 223334455 6999988765433211 0113567788888877
31267
31268
31269 Q NP_000836.2 202 QAQAMVDIVTAL-----GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPN 274 (908)
31270 Q Consensus 202 ~~~~~~~~l~~~-----~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (908)
31271 .++.+++++.+. +.++++++.. +..++..+.+++++.+++. ++++....... ....+....++++++..+
31272 T Consensus 118 ~~~~~~~~l~~~~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 194 (304)
31273 T 3O1I_D 118 MGYEAGKYLAERHPKGSGKTNIALLLGPRTRGGTKPVTTGFYEAIKNS-DIHIVDSFWAD--NDKELQRNLVQRVIDMGN 194 (304)
31274 T ss_dssp HHHHHHHHHHTTSCTTSCCEEEEEECCSSSTTTSHHHHHHHHHHHHSS-SEEEEEECCCC--SCHHHHHHHHHHHHHHSC
31275 T ss_pred HHHHHHHHHHHHCCCCCCCeEEEEEeCCCCCCcchHHHHHHHHHHhcC-CcEEeeeeecC--CCHHHHHHHHHHHHHcCC
31276 Confidence 788888887554 6678999985 3335667788888888764 35443221111 111233344555542235
31277
31278
31279 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
31280 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
31281 +++|+.. ++ .+..+++++++.|+..++.+++.
31282 T Consensus 195 ~~~i~~~-~~-~~~~~~~~~~~~g~~~~~~v~~~ 226 (304)
31283 T 3O1I_D 195 IDYIVGS-AV-AIEAAISELRSADKTHDIGLVSV 226 (304)
31284 T ss_dssp CSEEEEC-HH-HHHHHHHHHHHTTCTTTSEEEES
31285 T ss_pred CCEEEEc-ch-HHHHHHHHHHHCCCCCCeEEEEE
31286 Confidence 6666554 33 56778888887776323444443
31287
31288
31289 No 161
31290 >3O1J_C Sensor protein TorS (E.C.2.7.13.3), Periplasmic; Isopropanol bound, Two component sensor; 2.95A {Vibrio parahaemolyticus}
31291 Probab=97.41 E-value=1.6e-07 Score=95.14 Aligned_cols=216 Identities=7% Similarity=-0.002 Sum_probs=120.7 Template_Neff=11.800
31292
31293 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
31294 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
31295 +++++||++.|.... ..+..+..+++.++++.+ +++.+...|...++. ...+.+++
31296 T Consensus 3 ~~~~~Ig~~~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~~~~~~----~~~~~~~~ 58 (304)
31297 T 3O1J_C 3 GSDEKICAIYPHLKD------------SYWLSVNYGMVSEAEKQG--------VNLRVLEAGGYPNKS----RQEQQLAL 58 (304)
31298 T ss_dssp --CCEEEEEESCSCS------------HHHHHHHHHHHHHHHHTT--------CEEEEEECSSTTCHH----HHHHHHHH
31299 T ss_pred CCCceEEEEEccCCC------------hHHHHHHHHHHHHHHHcC--------CEEEEEcCCCCCCHH----HHHHHHHH
31300 Confidence 467899999987432 245677788888888753 455555444322321 22233443
31301
31302
31303 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
31304 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
31305 ++. ++++++|+...+.. .......+. .++|+|..+...+... ....++.+++.++...
31306 T Consensus 59 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~-~~ipvv~~~~~~~~~~-~~~~~~~~~v~~d~~~ 117 (304)
31307 T 3O1J_C 59 CTQ-------------------WGANAIILGTVDPHAYEHNLKSWV-GNTPVFATVNQLDLDE-EQSTLLKGEVGVDWYW 117 (304)
31308 T ss_dssp HHH-------------------HTCSEEEECCSSSSTTSSCSTTTT-TTCCEEECSSCCCCCH-HHHTTEEEEECCCHHH
31309 T ss_pred HHH-------------------hCCCEEEEcCCCHHhHHHHHHHHh-cCCCEEEEecCCCCCh-HHhhcceEEEEcChHH
31310 Confidence 332 47888877543322 223334455 6999988765433211 0113567788888877
31311
31312
31313 Q NP_000836.2 202 QAQAMVDIVTAL-----GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPN 274 (908)
31314 Q Consensus 202 ~~~~~~~~l~~~-----~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (908)
31315 .++.+++++.+. +.++++++.. +..++..+.+++++.+++. ++++....... ....+....++++++..+
31316 T Consensus 118 ~~~~~~~~l~~~~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 194 (304)
31317 T 3O1J_C 118 MGYEAGKYLAERHPKGSGKTNIALLLGPRTRGGTKPVTTGFYEAIKNS-DIHIVDSFWAD--NDKELQRNLVQRVIDMGN 194 (304)
31318 T ss_dssp HHHHHHHHHHHHSCTTSCCEEEEEEEECCC----THHHHHHHHHHSSS-SEEEEEEEECC--SCHHHHHHHHHHHHHTCC
31319 T ss_pred HHHHHHHHHHHHCCCCCCCeEEEEEeCCCCCCcchHHHHHHHHHHhcC-CcEEeeeeecC--CCHHHHHHHHHHHHHcCC
31320 Confidence 788888887554 6678999985 3335667788888888764 35443221111 111233344555542235
31321
31322
31323 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
31324 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
31325 +++|+.. ++ .+..+++++++.|+..++.+++.
31326 T Consensus 195 ~~~i~~~-~~-~~~~~~~~~~~~g~~~~~~v~~~ 226 (304)
31327 T 3O1J_C 195 IDYIVGS-AV-AIEAAISELRSADKTHDIGLVSV 226 (304)
31328 T ss_dssp CSEEEEC-HH-HHHHHHHHHHHTTCTTTSEEEES
31329 T ss_pred CCEEEEc-ch-HHHHHHHHHHHCCCCCCeEEEEE
31330 Confidence 6666554 33 56778888887776323444443
31331
31332
31333 No 162
31334 >4YHS_A ABC TRANSPORTER SOLUTE BINDING PROTEIN; ABC TRANSPORTER SOLUTE BINDING PROTEIN; HET: MSE, BTB; 1.8A {Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)}
31335 Probab=97.41 E-value=1.6e-07 Score=97.66 Aligned_cols=215 Identities=11% Similarity=0.036 Sum_probs=122.9 Template_Neff=10.800
31336
31337 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
31338 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
31339 ....+.++||++.|..+. .++..+..+++.++++. |+++.+...|+..++ ....+.
31340 T Consensus 53 ~~~~~~~~Igvv~~~~~~------------~~~~~~~~g~~~a~~~~--------g~~l~~~~~~~~~~~----~~~~~~ 108 (354)
31341 T 4YHS_A 53 EKASKPWKLCVSFPHMKD------------AYWLGVDYGVAEESKRL--------GVKMNLVEAGGYTEL----NKQISQ 108 (354)
31342 T ss_dssp SCCSSCCEEEEEESCCCS------------HHHHHHHHHHHHHHHHH--------TCEEEEEECSSTTCH----HHHHHH
31343 T ss_pred ccCCCCeEEEEEeCCCCC------------HHHHHHHHHHHHHHHHh--------CCEEEEEecCCCCCH----HHHHHH
31344 Confidence 345678999999987542 24567778888888774 345655555432232 122333
31345
31346
31347 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAA-ASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
31348 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~-~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
31349 +++++. ++++++|+.. .+.........+.+.++|+|.++...+. .++.+++.++
31350 T Consensus 109 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d 163 (354)
31351 T 4YHS_A 109 IEDCVA-------------------SGTDAVIIGAISADGLNKVIGEIAKKKIPVIDLVNGISS------PDIAAKSLVS 163 (354)
31352 T ss_dssp HHHHHH-------------------HCCSEEEECCSSSSTTHHHHHHHHTTTCCEEEESSCCCC------TTCCEEECCC
31353 T ss_pred HHHHHH-------------------cCCCEEEEcCCCHHhhHHHHHHHHhcCCCEEEEcCCCCC------hhhceEeecC
31354 Confidence 444332 4677776543 3322334455667789999987654321 2445667777
31355
31356
31357 Q NP_000836.2 199 DSYQAQAMVDIVTAL---GWNYVSTLA----SEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE 271 (908)
31358 Q Consensus 199 ~~~~~~~~~~~l~~~---~~~~v~ii~----~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~ 271 (908)
31359 ....++.+++++.+. +.+++++++ .+..++..+.++|++.+++. ++.+....... .+..+....++++++
31360 T Consensus 164 ~~~~~~~~~~~l~~~~~~g~~~i~~i~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~l~ 240 (354)
31361 T 4YHS_A 164 FYTMGAETGSYLAKKHPAGTPEVVVGWFPGPAGAGWVEAANKGFMDAVKGS-AIKVLEPKYGD--TGKEVQAKLVEDALQ 240 (354)
31362 T ss_dssp HHHHHHHHHHHHHHHSCTTSCCEEEEEECSSTTCHHHHHHHHHHHHHHTTS-SEEECCCCCCC--SCHHHHHHHHHHHHH
31363 T ss_pred HHHHHHHHHHHHHHHCCCCCCcEEEEEEcCCCCChHHHHHHHHHHHHHcCC-CcEEEccccCC--CCHHHHHHHHHHHHH
31364 Confidence 777777888887654 778888863 12334566778888877764 35443221111 111233344555542
31365
31366
31367 Q NP_000836.2 272 T-PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
31368 Q Consensus 272 ~-~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
31369 . .++++|+.. +..+..+++++++.|+..++.+++.
31370 T Consensus 241 ~~~~~~~i~~~--~~~a~~~~~~l~~~g~~~~v~i~g~ 276 (354)
31371 T 4YHS_A 241 AAPNIRYVAGT--AVTAEAAQGLIRERGLKGKVDLLAF 276 (354)
31372 T ss_dssp HCTTCCEEEEC--HHHHHHHHHHHHHTTCBTTBEEEES
31373 T ss_pred HCCCCCEEEEC--chHHHHHHHHHHHCCCCCCcEEEEE
31374 Confidence 1 245555443 3456777888887776323334443
31375
31376
31377 No 163
31378 >3CLK_B Transcription regulator; 11017j, PSI-II, NYSGXRC, dimer, Structural; 2.08A {Lactobacillus plantarum WCFS1}
31379 Probab=97.41 E-value=1.6e-07 Score=94.34 Aligned_cols=205 Identities=11% Similarity=0.084 Sum_probs=114.7 Template_Neff=11.800
31380
31381 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
31382 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
31383 ..++.++||++.|..+. .++.....+++.++++. |+++.+...+. .++ ....+.+
31384 T Consensus 4 ~~~~~~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~-~~~----~~~~~~~ 58 (290)
31385 T 3CLK_B 4 VKKSSNVIAAVVSSVRT------------NFAQQILDGIQEEAHKN--------GYNLIIVYSGS-ADP----EEQKHAL 58 (290)
31386 T ss_dssp ------CEEEEEC----------------CHHHHHHHHHHHHHTTT--------TCCEEEEC-----------CHHHHHH
31387 T ss_pred ccCCCCEEEEEECCCCC------------hHHHHHHHHHHHHHHHc--------CCeEEEEeCCC-CCH----HHHHHHH
31388 Confidence 34568999999987542 25566778888887765 34454443332 221 1222333
31389
31390
31391 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
31392 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
31393 ++++. .++|++|+...+.. ......+...++|+|..+...+ +.++.+.+++.
31394 T Consensus 59 ~~~~~-------------------~~~d~ii~~~~~~~-~~~~~~~~~~~ip~v~~~~~~~--------~~~~~v~~d~~ 110 (290)
31395 T 3CLK_B 59 LTAIE-------------------RPVMGILLLSIALT-DDNLQLLQSSDVPYCFLSMGFD--------DDRPFISSDDE 110 (290)
31396 T ss_dssp HHHHH-------------------SCCSEEEEESCCCC-HHHHHHHHHTTCCEEEESCCCS--------SSCCEEECCHH
31397 T ss_pred HHHHh-------------------CCCCEEEEecccCC-hHHHHHHHhCCCCEEEEccCCC--------CCCCEEeeCcH
31398 Confidence 33332 47888887654433 3444566778999998765432 24566777777
31399
31400
31401 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
31402 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
31403 ..++.+++++.+.+.++++++..+.. ++..+.+++++.+++. ++.+........+.+..+....++++....++|+|
31404 T Consensus 111 ~~~~~~~~~l~~~g~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 189 (290)
31405 T 3CLK_B 111 DIGYQATNLLINEGHRQIGIAGIDQYPYTGRKRLAGYKKALKEA-NIAINQEWIKPGDYSYTSGEQAMKAFGKNTDLTGI 189 (290)
31406 T ss_dssp HHHHHHHHHHHTTTCCSEEEESCCCSSHHHHHHHHHHHHHHHHT-TCCCCGGGEECCCSSHHHHHHHHHHHCTTCCCSEE
31407 T ss_pred HHHHHHHHHHHHCCCCCEEEEcCCCCCccchHHHHHHHHHHHHC-CCCCChhhccCCCCChhhHHHHHHHHhhCCCCCEE
31408 Confidence 77888888887668889999985443 5566778888888765 34443211111001112233444444322467888
31409
31410
31411 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
31412 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
31413 ++.. +..+..+++++++.|+.
31414 T Consensus 190 ~~~~-~~~~~~~~~~l~~~g~~ 210 (290)
31415 T 3CLK_B 190 IAAS-DMTAIGILNQASSFGIE 210 (290)
31416 T ss_dssp EESS-HHHHHHHHHHHHHTTCC
31417 T ss_pred EECC-HHHHHHHHHHHHHCCCC
31418 Confidence 7664 33466778888877764
31419
31420
31421 No 164
31422 >2RGY_A Transcriptional regulator, LacI family; 11011j, NYSGXRC, Transctiptional regulator, LacI; 2.05A {Burkholderia phymatum}
31423 Probab=97.40 E-value=1.6e-07 Score=94.18 Aligned_cols=208 Identities=13% Similarity=0.021 Sum_probs=118.5 Template_Neff=12.000
31424
31425 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
31426 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
31427 ..+++++||++.|..+. .++..+..+++.++++. |+++.+...++..+. .+...+.+
31428 T Consensus 4 ~~~~~~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~---~~~~~~~~ 60 (290)
31429 T 2RGY_A 4 ATQQLGIIGLFVPTFFG------------SYYGTILKQTDLELRAV--------HRHVVVATGCGESTP---REQALEAV 60 (290)
31430 T ss_dssp ----CCEEEEECSCSCS------------HHHHHHHHHHHHHHHHT--------TCEEEEECCCSSSCH---HHHHHHHH
31431 T ss_pred ccCCCceEEEEecCCCC------------chHHHHHHHHHHHHHHC--------CCeEEEEeCCCCCCh---HHHHHHHH
31432 Confidence 44578999999997542 25566777877666653 344544433321111 11222333
31433
31434
31435 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
31436 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
31437 +.+.. .++|++|+...+... .....+.+.++|+|..+...+ .++.+++..++.
31438 T Consensus 61 ~~~~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~ip~v~~~~~~~-------~~~~~~v~~d~~ 113 (290)
31439 T 2RGY_A 61 RFLIG-------------------RDCDGVVVISHDLHD-EDLDELHRMHPKMVFLNRAFD-------ALPDASFCPDHR 113 (290)
31440 T ss_dssp HHHHH-------------------TTCSEEEECCSSSCH-HHHHHHHHHCSSEEEESSCCT-------TSGGGEECCCHH
31441 T ss_pred HHHhh-------------------CCCCEEEEEcCCCCH-HHHHHHHHcCCcEEEECCCCC-------CCCCceeecChH
31442 Confidence 33322 478888875544332 444556678999988765432 134566667777
31443
31444
31445 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNY--GESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
31446 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~--~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
31447 ..+..+++++.+.+.++++++..+..+ +..+.+++++.+++. ++.+........+.+..+....+++++.. .++++
31448 T Consensus 114 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 192 (290)
31449 T 2RGY_A 114 RGGELAAATLIEHGHRKLAVISGPFTASDNVERLDGFFDELARH-GIARDSVPLIESDFSPEGGYAATCQLLESKAPFTG 192 (290)
31450 T ss_dssp HHHHHHHHHHHHTTCCSEEEEESCTTCHHHHHHHHHHHHHHHTT-TCCGGGSCEEECCSSHHHHHHHHHHHHHHTCCCSE
31451 T ss_pred HHHHHHHHHHHHCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHC-CCCCCCCcEEEcCCChHHHHHHHHHHHhCCCCCCE
31452 Confidence 777788888766688899999865433 556777888877764 34332111111001122334445555421 24788
31453
31454
31455 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
31456 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
31457 |++.. +..+..+++++++.|+.
31458 T Consensus 193 i~~~~-~~~a~~~~~~l~~~g~~ 214 (290)
31459 T 2RGY_A 193 LFCAN-DTMAVSALARFQQLGIS 214 (290)
31460 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
31461 T ss_pred EEECC-HHHHHHHHHHHHHCCCC
31462 Confidence 87664 44567788888887764
31463
31464
31465 No 165
31466 >6HB0_A ABC transporter periplasmic-binding protein YtfQ; periplasmic binding protein, SUGAR BINDING; HET: ZN; 1.9A {Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)}
31467 Probab=97.39 E-value=1.8e-07 Score=95.75 Aligned_cols=211 Identities=12% Similarity=0.058 Sum_probs=120.2 Template_Neff=11.600
31468
31469 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
31470 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
31471 .....+.++||++.|..+. .++.....+++.++++.| +++.+.|+..++. ...+
31472 T Consensus 13 ~~~~~~~~~Ig~~~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~l~~~~~~~~~~----~~~~ 66 (322)
31473 T 6HB0_A 13 GSAPDGALTLGFAQVGAES------------GWRTANTESIKSAAEEAG----------VNLKFADANGEQE----KQIS 66 (322)
31474 T ss_dssp -----CCCEEEEEECC---------------CCSCCCHHHHHHHHHHHT----------CEEEEEECTTCHH----HHHH
31475 T ss_pred CCCCCCCeEEEEEeeCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEECCCCCHH----HHHH
31476 Confidence 4566789999999997642 255667788888887753 3344555443322 2233
31477
31478
31479 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAAS-SVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
31480 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s-~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
31481 .+++++. .+++++|....+ .........+...++|+|..+...+.. ...++.+++.+
31482 T Consensus 67 ~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~---~~~~~~~~v~~ 124 (322)
31483 T 6HB0_A 67 AIRSFIQ-------------------QGVDVIAFSPVVRTGWDAVLQETKNAGIPVILTDRAVDTQ---DTDVYKTFIGA 124 (322)
31484 T ss_dssp HHHHHHH-------------------TTCSEEEECCSSSSSCHHHHHHHHHTTCCEEEESSCCCCS---SSSSCSEEECC
31485 T ss_pred HHHHHHH-------------------cCCCEEEECCCCcccHHHHHHHHHHCCCCEEEECCCCCCC---CCchhceEEec
31486 Confidence 3443332 367766653332 222344455667899999877644321 11345677788
31487
31488
31489 Q NP_000836.2 198 PDSYQAQAMVDIVTA-----LGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLL 270 (908)
31490 Q Consensus 198 ~~~~~~~~~~~~l~~-----~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~ 270 (908)
31491 ++...++.+++++.+ .+.++++++.. ++.++..+.++|++.+++.+++++....... .+..+....+++++
31492 T Consensus 125 d~~~~~~~~~~~l~~~~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~ 202 (322)
31493 T 6HB0_A 125 DFIEEGRRAGQWVADQYASATGPVNIVQLEGTTGADPAIDRKTGFAEGISKNPNLKIVASQTGD--FTRSGGKQVMEAFL 202 (322)
31494 T ss_dssp CHHHHHHHHHHHHHHHTTTCSSCEEEEEEECSTTCHHHHHHHHHHHHHHTTCTTEEEEEEEECT--TSHHHHHHHHHHHH
31495 T ss_pred ChHHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCchHHHHHHHHHHHHhhCCCcEEEEeecCC--CCHHHHHHHHHHHH
31496 Confidence 877778888887754 47789999985 3456667788888887764224443221111 11123344555554
31497
31498
31499 Q NP_000836.2 271 E-TPNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
31500 Q Consensus 271 ~-~~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
31501 . ..++++|++.. +..+..+++++++.|+.
31502 T Consensus 203 ~~~~~~d~i~~~~-~~~a~~~~~~~~~~g~~ 232 (322)
31503 T 6HB0_A 203 KSTPQIDVVFAQN-DDMGLGAMEAIEAAGKK 232 (322)
31504 T ss_dssp HHCSCCCEEEESS-HHHHHHHHHHHHHTTCC
31505 T ss_pred HHCCCcCEEEECC-HHHHHHHHHHHHHcCCC
31506 Confidence 2 13567776654 34556778888877764
31507
31508
31509 No 166
31510 >1SXG_D Glucose-resistance amylase regulator; allosterism phosphoprotein transcription; HET: 171; 2.75A {Bacillus megaterium} SCOP: c.93.1.1
31511 Probab=97.39 E-value=1.8e-07 Score=93.21 Aligned_cols=204 Identities=11% Similarity=0.116 Sum_probs=120.8 Template_Neff=12.200
31512
31513 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
31514 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
31515 .++.++||++.|..+. .++..+..+++.++++.+ +++.+.|+..++ +...+.++
31516 T Consensus 5 ~~~~~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~ 58 (280)
31517 T 1SXG_D 5 SKKTTTVGVIIPDISN------------IFYAELARGIEDIATMYK----------YNIILSNSDQNQ----DKELHLLN 58 (280)
31518 T ss_dssp -CCCCEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHHH
31519 T ss_pred CCCCCeEEEEeCCccc------------HHHHHHHHHHHHHHHHcC----------CeEEEeeCCCCH----HHHHHHHH
31520 Confidence 4568999999987542 245667778887776642 334445544332 22233344
31521
31522
31523 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
31524 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
31525 +++. .++|++|+...+. .......+...++|+|..+...+ .++.+++.+++..
31526 T Consensus 59 ~l~~-------------------~~~d~ii~~~~~~-~~~~~~~~~~~~ip~v~~~~~~~-------~~~~~~v~~d~~~ 111 (280)
31527 T 1SXG_D 59 NMLG-------------------KQVDGIIFMSGNV-TEEHVEELKKSPVPVVLAASIES-------TNQIPSVTIDYEQ 111 (280)
31528 T ss_dssp HHHH-------------------TCCSEEEECCSCC-CHHHHHHHHHCSSCEEEESCCCT-------TCCSCEEEECHHH
31529 T ss_pred HHHc-------------------CCCCEEEEeCCCC-CHHHHHHHHhCCCCEEEeCCCCC-------CCCCCeEEeChHH
31530 Confidence 4332 4788888755443 33444556678999998765322 2346677777777
31531
31532
31533 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGN---YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
31534 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~---~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
31535 .++.+++++.+.+.++++++..+.. .+..+.++|++.+++. ++.+.....+..+.+..+....+++++.. .++++
31536 T Consensus 112 ~~~~~~~~l~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (280)
31537 T 1SXG_D 112 AAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTES-GLPVRDSYIVEGDYTYDSGIEAVEKLLEEDEKPTA 190 (280)
31538 T ss_dssp HHHHHHHHHHTTSCSCEEEEESCTTSHCCCCCCHHHHHHHHHHT-TCCCCGGGEEECCSSHHHHHHHHHHHTTSSSCCSE
31539 T ss_pred HHHHHHHHHHHCCCCeEEEEeCCCCCcccHHHHHHHHHHHHHHc-CCCCCHHHeeecCCChhhHHHHHHHHHHcCCCCCE
31540 Confidence 7888888876667889999985433 4556778888887765 34433221111001122334445555421 24677
31541
31542
31543 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
31544 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
31545 |++.. +..+..+++++++.|+.
31546 T Consensus 191 v~~~~-~~~~~~~~~~l~~~g~~ 212 (280)
31547 T 1SXG_D 191 IFVGT-DEMALGVIHGAQDRGLN 212 (280)
31548 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
31549 T ss_pred EEECC-hHHHHHHHHHHHHCCCC
31550 Confidence 76654 34566777888877763
31551
31552
31553 No 167
31554 >2NZV_G Catabolite control protein, Phosphocarrier protein; CCpA, HPrser46-p, CCR, fructose-bis-phosphate, adjunct; HET: SEP, SO4, FBP; 3.0A {Bacillus megaterium} SCOP: c.93.1.1
31555 Probab=97.39 E-value=1.8e-07 Score=93.21 Aligned_cols=204 Identities=11% Similarity=0.116 Sum_probs=120.8 Template_Neff=12.200
31556
31557 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
31558 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
31559 .++.++||++.|..+. .++..+..+++.++++.+ +++.+.|+..++ +...+.++
31560 T Consensus 5 ~~~~~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~ 58 (280)
31561 T 2NZV_G 5 SKKTTTVGVIIPDISN------------IFYAELARGIEDIATMYK----------YNIILSNSDQNQ----DKELHLLN 58 (280)
31562 T ss_dssp -CCCSEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHHH
31563 T ss_pred CCCCCeEEEEeCCccc------------HHHHHHHHHHHHHHHHcC----------CeEEEeeCCCCH----HHHHHHHH
31564 Confidence 4568999999987542 245667778887776642 334445544332 22233344
31565
31566
31567 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
31568 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
31569 +++. .++|++|+...+. .......+...++|+|..+...+ .++.+++.+++..
31570 T Consensus 59 ~l~~-------------------~~~d~ii~~~~~~-~~~~~~~~~~~~ip~v~~~~~~~-------~~~~~~v~~d~~~ 111 (280)
31571 T 2NZV_G 59 NMLG-------------------KQVDGIIFMSGNV-TEEHVEELKKSPVPVVLAASIES-------TNQIPSVTIDYEQ 111 (280)
31572 T ss_dssp HHHH-------------------TCCSCEEECCSCC-CHHHHHHTTSCSSCEEEESCCCT-------TCCSCEEEECHHH
31573 T ss_pred HHHc-------------------CCCCEEEEeCCCC-CHHHHHHHHhCCCCEEEeCCCCC-------CCCCCeEEeChHH
31574 Confidence 4332 4788888755443 33444556678999998765322 2346677777777
31575
31576
31577 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGN---YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
31578 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~---~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
31579 .++.+++++.+.+.++++++..+.. .+..+.++|++.+++. ++.+.....+..+.+..+....+++++.. .++++
31580 T Consensus 112 ~~~~~~~~l~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (280)
31581 T 2NZV_G 112 AAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTES-GLPVRDSYIVEGDYTYDSGIEAVEKLLEEDEKPTA 190 (280)
31582 T ss_dssp HHHHHHHHHHHHHCSCEEEECSCTTSHHCCCCCCHHHHHHHHTT-CCCCCTTSEECCCSSHHHHHHHHHHHHTSSSCCSE
31583 T ss_pred HHHHHHHHHHHCCCCeEEEEeCCCCCcccHHHHHHHHHHHHHHc-CCCCCHHHeeecCCChhhHHHHHHHHHHcCCCCCE
31584 Confidence 7888888876667889999985433 4556778888887765 34433221111001122334445555421 24677
31585
31586
31587 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
31588 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
31589 |++.. +..+..+++++++.|+.
31590 T Consensus 191 v~~~~-~~~~~~~~~~l~~~g~~ 212 (280)
31591 T 2NZV_G 191 IFVGT-DEMALGVIHGAQDRGLN 212 (280)
31592 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
31593 T ss_pred EEECC-hHHHHHHHHHHHHCCCC
31594 Confidence 76654 34566777888877763
31595
31596
31597 No 168
31598 >4RS3_A ABC transporter, carbohydrate uptake transporter-2; SUGAR TRANSPORTER, ABC-TYPE, ENZYME FUNCTION; HET: XYL, MSE, IMD, ACT, ZN, CL; 1.4A {Mycobacterium smegmatis str. MC2 155}
31599 Probab=97.37 E-value=1.9e-07 Score=95.69 Aligned_cols=213 Identities=13% Similarity=0.075 Sum_probs=120.1 Template_Neff=11.500
31600
31601 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
31602 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
31603 ....+.++||++.|..+. ++.....+++.++++.+ +++.+.|+..++. ...+.
31604 T Consensus 7 ~~~~~~~~Ig~v~~~~~~-------------~~~~~~~g~~~~~~~~~----------~~l~~~~~~~~~~----~~~~~ 59 (327)
31605 T 4RS3_A 7 AANSDTKRIGVTVYDMSS-------------FITEGKEGMDTYAKANN----------IELVWNSANNDVS----TQASQ 59 (327)
31606 T ss_dssp -----CEEEEEEESCCCH-------------HHHHHHHHHHHHHHHTT----------EEEEEEECTTCHH----HHHHH
31607 T ss_pred cccCCCcEEEEEECCccH-------------HHHHHHHHHHHHHHHCC----------cEEEEecCCCCHH----HHHHH
31608 Confidence 345678999999987532 44566777777776632 3445555543322 22333
31609
31610
31611 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
31612 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
31613 +++++. ++++++|+...+... ......+...++|+|.++...+. .++++++.++
31614 T Consensus 60 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d 114 (327)
31615 T 4RS3_A 60 VDSLIN-------------------QGVDAIIVVPVQADSLGPQVASAKSKGIPLLAVNAALET------PDLAGNVQPD 114 (327)
31616 T ss_dssp HHHHHH-------------------HTCSEEEEECSCSSCCHHHHHHHHHTTCCEEEESSCCCC------TTCSEEEEEC
31617 T ss_pred HHHHHh-------------------CCCCEEEEecCCccccHHHHHHHHHCCCCEEEEcCCCCC------CCcceEecCC
31618 Confidence 343332 467877765443322 23344556679999987654321 2345677777
31619
31620
31621 Q NP_000836.2 199 DSYQAQAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-- 272 (908)
31622 Q Consensus 199 ~~~~~~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-- 272 (908)
31623 +...+..+++++.+. +.++++++.. ++.++..+.++|++.+++.+++++....... .+..+....++++++.
31624 T Consensus 115 ~~~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~ 192 (327)
31625 T 4RS3_A 115 DVAAGAQEMQMMADRLGGKGNIVILQGPLGGSGEINRGKGIDQVLAKYPDIKVLAKDTAN--WKRDEAVNKMKNWISSFG 192 (327)
31626 T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEECSTTSHHHHHHHHHHHHHHTTCTTEEEEEEEECT--TCHHHHHHHHHHHHHHHG
31627 T ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEECCCCChhHHHHHHHHHHHHHhCCCcEEEEeecCC--CCHHHHHHHHHHHHHHhc
31628 Confidence 777777888887654 7789999885 3445666777888777664223332211111 1122344445555421
31629
31630
31631 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
31632 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
31633 .++++|++.. +..+..+++++++.|+. ++.+++.
31634 T Consensus 193 ~~~~~i~~~~-~~~a~~~~~~l~~~g~~-~i~i~g~ 226 (327)
31635 T 4RS3_A 193 PQIDGVVAQN-DDMGLGALQALKEAGRT-GVPIVGI 226 (327)
31636 T ss_dssp GGCCEEEESS-HHHHHHHHHHHHHTTCC-CCCEECS
31637 T ss_pred CCCCEEEECC-hHHHHHHHHHHHHcCCC-CCCEEEe
31638 Confidence 2377776664 44566788888887763 2344443
31639
31640
31641 No 169
31642 >5OCP_A Periplasmic binding protein/LacI transcriptional regulator; ABC transporter, periplasmic, binding protein; HET: FUB, GOL, AHR; 1.7A {Shewanella sp. ANA-3}
31643 Probab=97.36 E-value=2e-07 Score=94.25 Aligned_cols=203 Identities=14% Similarity=0.084 Sum_probs=118.2 Template_Neff=11.600
31644
31645 Q NP_000836.2 47 ILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALIEK 126 (908)
31646 Q Consensus 47 ~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~~~ 126 (908)
31647 +||+++|.... .++..+..+++.++++.+ +++.+.|+..++. ...+.+++++.
31648 T Consensus 2 ~Igv~~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~l~~~~~~~~~~----~~~~~~~~l~~- 54 (302)
31649 T 5OCP_A 2 TVGFSQVGSES------------GWRTSFSEAVKAEAKQRG----------IDLKFADAQQKQE----NQIKAVRSFIA- 54 (302)
31650 T ss_dssp EEEEEECCCSS------------HHHHHHHHHHHHHHHHHT----------CEEEEEECTTCHH----HHHHHHHHHHH-
31651 T ss_pred eEEEecCCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEecCCCCHH----HHHHHHHHHHH-
31652 Confidence 67888764322 255677788888887642 3445555544322 22333443332
31653
31654
31655 Q NP_000836.2 127 DASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQA 205 (908)
31656 Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 205 (908)
31657 ++++++|+...+... ......+...++|+|..+...+.. ...++++++.+++...++.
31658 T Consensus 55 ------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~---~~~~~~~~v~~d~~~~~~~ 113 (302)
31659 T 5OCP_A 55 ------------------QGVDAIIIAPVVETGWKPVLKEAKRAKIPVVIVDRNIKVD---DDSLFLTRIASDFSEEGRK 113 (302)
31660 T ss_dssp ------------------TTCSEEEECCSSSSSCHHHHHHHHHTTCCEEEESSCCCCS---CGGGCSEEEECCHHHHHHH
31661 T ss_pred ------------------cCCCEEEEcCCCcCChHHHHHHHHHCCCCEEEEcCCCCCC---ccccceEEEcCCchHHHHH
31662 Confidence 467877765443332 244556677899999887654321 1235677888888777888
31663
31664
31665 Q NP_000836.2 206 MVDIVTAL--GWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET---PNARAV 278 (908)
31666 Q Consensus 206 ~~~~l~~~--~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~vi 278 (908)
31667 +++++.+. +.++++++..+.. ++..+.++|++.+++.+...+....... .+..+....++++++. .++|+|
31668 T Consensus 114 ~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~i 191 (302)
31669 T 5OCP_A 114 IGQWLMDKTQGNCDIAELQGTVGATAAIDRAAGFNQVIANYPNAKIVRSQTGE--FTRAKGKEVMEGFLKAQNGQPLCAV 191 (302)
31670 T ss_dssp HHHHHHHHTTTCEEEEEEECCTTCHHHHHHHHHHHHHHTTCTTEEEEEEEECT--TCHHHHHHHHHHHHHHHTTCCCCEE
31671 T ss_pred HHHHHHHHcCCCeeEEEEEcCCCCHHHHHHHHHHHHHHHhCCCcEEEEeeeCC--CCHHHHHHHHHHHHHHcCCCCccEE
31672 Confidence 88887654 7889999985433 5667778888877764222222111111 1112333444554421 357787
31673
31674
31675 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
31676 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
31677 ++.. +..+..+++++++.|+.
31678 T Consensus 192 ~~~~-~~~a~~~~~~l~~~g~~ 212 (302)
31679 T 5OCP_A 192 WSHN-DEMALGAVQAIKEAGLK 212 (302)
31680 T ss_dssp EESS-HHHHHHHHHHHHHTTCC
31681 T ss_pred EECC-HHHHHHHHHHHHHCCCC
31682 Confidence 7664 44566788888877764
31683
31684
31685 No 170
31686 >3BIL_A Probable LacI-family transcriptional regulator; STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2; 2.5A {Corynebacterium glutamicum ATCC 13032}
31687 Probab=97.36 E-value=2.1e-07 Score=96.38 Aligned_cols=202 Identities=11% Similarity=0.033 Sum_probs=116.9 Template_Neff=11.400
31688
31689 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
31690 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
31691 ..+.++||++.|..+. .++.....+++.++++.+ +++.+.|+..++ +...+.++
31692 T Consensus 63 ~~~~~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~ 116 (348)
31693 T 3BIL_A 63 SSRSNTIGVIVPSLIN------------HYFAAMVTEIQSTASKAG----------LATIITNSNEDA----TTMSGSLE 116 (348)
31694 T ss_dssp -----CEEEEESCSSS------------HHHHHHHHHHHHHHHHTT----------CCEEEEECTTCH----HHHHHHHH
31695 T ss_pred cCCCCEEEEEEcCCCC------------hHHHHHHHHHHHHHHHCC----------CEEEEEcCCCCh----hhhhHHHH
31696 Confidence 4567899999987542 255667778887777642 334455544332 22233444
31697
31698
31699 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
31700 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
31701 +++. +++|++|+...+. .......+...++|+|..+...+. .++++.+..+...
31702 T Consensus 117 ~l~~-------------------~~~d~ii~~~~~~-~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~~~~~ 170 (348)
31703 T 3BIL_A 117 FLTS-------------------HGVDGIICVPNEE-CANQLEDLQKQGMPVVLVDRELPG------DSTIPTATSNPQP 170 (348)
31704 T ss_dssp HHHH-------------------TTCSCEEECCCGG-GHHHHHHHHHC-CCEEEESSCCSC------C-CCCEEEEECHH
31705 T ss_pred HHHH-------------------cCCCEEEECCccc-cHHHHHHHHHcCCCEEEEcCCCCC------CCCCCEEEeCcHH
31706 Confidence 4332 4788888755443 334445566789999987764431 2345666666666
31707
31708
31709 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
31710 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
31711 .+..+++++.+.+.++++++..+. .++..+.++|++.+++. ++.+....... .+..+....+++++. .++|+|+
31712 T Consensus 171 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~d~i~ 246 (348)
31713 T 3BIL_A 171 GIAAAVELLAHNNALPIGYLSGPMDTSTGRERLEDFKAACANS-KIGEQLVFLGG--YEQSVGFEGATKLLD-QGAKTLF 246 (348)
31714 T ss_dssp HHHHHHHHHHHTTCCSEEEECCCTTSHHHHHHHHHHHHHHHHT-TCCCCEEECCC--SSHHHHHHHHHHHHH-TTCSEEE
31715 T ss_pred HHHHHHHHHHhCCCCcEEEEeCCCCChhHHHHHHHHHHHHHhC-CCCcceEEecC--CChHhHHHHHHHHHh-cCCCEEE
31716 Confidence 677777777666788999998543 35667788888888764 34332211111 112233445556653 4688877
31717
31718
31719 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQS 300 (908)
31720 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~ 300 (908)
31721 +.. +..+..+++++++.|..
31722 T Consensus 247 ~~~-d~~a~~~~~~l~~~g~~ 266 (348)
31723 T 3BIL_A 247 AGD-SMMTIGVIEACHKAGLV 266 (348)
31724 T ss_dssp ESS-HHHHHHHHHHHHHTTCC
31725 T ss_pred ECC-HHHHHHHHHHHHHCCCC
31726 Confidence 663 44566778888877763
31727
31728
31729 No 171
31730 >3O74_A Fructose transport system repressor FruR; Dual transcriptional regulator, DNA, Transcription; HET: MSE, GOL; 2.0A {Pseudomonas putida}
31731 Probab=97.35 E-value=2.3e-07 Score=91.89 Aligned_cols=200 Identities=8% Similarity=0.042 Sum_probs=117.4 Template_Neff=12.400
31732
31733 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
31734 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
31735 +++||++.|..+. .++.....+++.++++.+ ++ +.+.+...+.. ...+..+.+.
31736 T Consensus 2 ~~~Ig~v~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~--~~~~~~~~~~~----~~~~~~~~~~ 55 (272)
31737 T 3O74_A 2 TRTLGFILPDLEN------------PSYARIAKQLEQGARARG--------YQ--LLIASSDDQPD----SERQLQQLFR 55 (272)
31738 T ss_dssp CCEEEEEESCTTC------------HHHHHHHHHHHHHHHHTT--------CE--EEEEECTTCHH----HHHHHHHHHH
31739 T ss_pred CceEEEEeCCCCC------------hHHHHHHHHHHHHHHHcC--------cE--EEEEeCCCChh----HHHHHHHHHH
31740 Confidence 5789999987542 255677788888877652 33 33334322211 1112222221
31741
31742
31743 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
31744 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
31745 . ++++++|+...+.........+...++|+|..+...+. +.++.+..++...+.
31746 T Consensus 56 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~-------~~~~~v~~d~~~~~~ 109 (272)
31747 T 3O74_A 56 A-------------------RRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRLDP-------AHFCSVISDDRDASR 109 (272)
31748 T ss_dssp H-------------------TTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESSCCCT-------TTCEEEEECHHHHHH
31749 T ss_pred H-------------------cCCCEEEEecCCCCchHHHHHHHHCCCCEEEECCCCCC-------CCCcEEEeCcHHHHH
31750 Confidence 1 47888887654433334455667789999987764331 345667777777777
31751
31752
31753 Q NP_000836.2 205 AMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET--PNARAVIM 280 (908)
31754 Q Consensus 205 ~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~viv~ 280 (908)
31755 .+++++.+.+.++++++..+.. ++..+.++|++.+++. ++.+....... .+..+....++++++. .++|++++
31756 T Consensus 110 ~~~~~l~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~v~~ 186 (272)
31757 T 3O74_A 110 QLAASLLSSAPRSIALIGARPELSVSQARAGGFDEALQGY-TGEVRRYQGEA--FSRECGQRLMQQLIDDLGGLPDALVT 186 (272)
31758 T ss_dssp HHHHHHHTTCCSEEEEEEECTTSHHHHHHHHHHHHHTTTC-CSEEEEEEESS--SSHHHHHHHHHHHHHHHTSCCSEEEE
31759 T ss_pred HHHHHHHHhCCCEEEEEEcCCCChHHHHHHHHHHHHHHhc-CCeeeEEeccc--CCHHHHHHHHHHHHHHhCCCCCEEEE
31760 Confidence 8888876668889999985433 5667788888888765 34433211111 1112334445555421 35778776
31761
31762
31763 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQS 300 (908)
31764 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~ 300 (908)
31765 .. +..+..+++++++.|+.
31766 T Consensus 187 ~~-~~~a~~~~~~l~~~g~~ 205 (272)
31767 T 3O74_A 187 TS-YVLLQGVFDTLQARPVD 205 (272)
31768 T ss_dssp SS-HHHHHHHHHHHHTSCGG
31769 T ss_pred cC-HHHHHHHHHHHHhCCCC
31770 Confidence 64 33466777788777764
31771
31772
31773 No 172
31774 >3O74_B Fructose transport system repressor FruR; Dual transcriptional regulator, DNA, Transcription; HET: GOL; 2.0A {Pseudomonas putida}
31775 Probab=97.35 E-value=2.3e-07 Score=91.89 Aligned_cols=200 Identities=8% Similarity=0.042 Sum_probs=117.4 Template_Neff=12.400
31776
31777 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
31778 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
31779 +++||++.|..+. .++.....+++.++++.+ ++ +.+.+...+.. ...+..+.+.
31780 T Consensus 2 ~~~Ig~v~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~--~~~~~~~~~~~----~~~~~~~~~~ 55 (272)
31781 T 3O74_B 2 TRTLGFILPDLEN------------PSYARIAKQLEQGARARG--------YQ--LLIASSDDQPD----SERQLQQLFR 55 (272)
31782 T ss_dssp CSEEEEEESCTTC------------HHHHHHHHHHHHHHHHTT--------CE--EEEEECTTCHH----HHHHHHHHHH
31783 T ss_pred CceEEEEeCCCCC------------hHHHHHHHHHHHHHHHcC--------cE--EEEEeCCCChh----HHHHHHHHHH
31784 Confidence 5789999987542 255677788888877652 33 33334322211 1112222221
31785
31786
31787 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
31788 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
31789 . ++++++|+...+.........+...++|+|..+...+. +.++.+..++...+.
31790 T Consensus 56 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~-------~~~~~v~~d~~~~~~ 109 (272)
31791 T 3O74_B 56 A-------------------RRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRLDP-------AHFCSVISDDRDASR 109 (272)
31792 T ss_dssp H-------------------TTCSEEEECCCSCTTCCHHHHHHHTTCCEEEESSCCCT-------TTCEEEEECHHHHHH
31793 T ss_pred H-------------------cCCCEEEEecCCCCchHHHHHHHHCCCCEEEECCCCCC-------CCCcEEEeCcHHHHH
31794 Confidence 1 47888887654433334455667789999987764331 345667777777777
31795
31796
31797 Q NP_000836.2 205 AMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET--PNARAVIM 280 (908)
31798 Q Consensus 205 ~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~viv~ 280 (908)
31799 .+++++.+.+.++++++..+.. ++..+.++|++.+++. ++.+....... .+..+....++++++. .++|++++
31800 T Consensus 110 ~~~~~l~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~v~~ 186 (272)
31801 T 3O74_B 110 QLAASLLSSAPRSIALIGARPELSVSQARAGGFDEALQGY-TGEVRRYQGEA--FSRECGQRLMQQLIDDLGGLPDALVT 186 (272)
31802 T ss_dssp HHHHHHHTTCCSEEEEEEECTTSHHHHHHHHHHHHTTTTC-CSEEEEEEESS--SSHHHHHHHHHHHHHHHTSCCSEEEE
31803 T ss_pred HHHHHHHHhCCCEEEEEEcCCCChHHHHHHHHHHHHHHhc-CCeeeEEeccc--CCHHHHHHHHHHHHHHhCCCCCEEEE
31804 Confidence 8888876668889999985433 5667788888888765 34433211111 1112334445555421 35778776
31805
31806
31807 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQS 300 (908)
31808 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~ 300 (908)
31809 .. +..+..+++++++.|+.
31810 T Consensus 187 ~~-~~~a~~~~~~l~~~g~~ 205 (272)
31811 T 3O74_B 187 TS-YVLLQGVFDTLQARPVD 205 (272)
31812 T ss_dssp SS-HHHHHHHHHHHHHSCTT
31813 T ss_pred cC-HHHHHHHHHHHHhCCCC
31814 Confidence 64 33466777788777764
31815
31816
31817 No 173
31818 >4Z0N_A Periplasmic Solute Binding Protein; Periplasmic solute binding Protein, ENZYME; HET: GAL, SO4, EDO, MSE; 1.26A {Streptobacillus moniliformis}
31819 Probab=97.34 E-value=2.3e-07 Score=95.62 Aligned_cols=222 Identities=13% Similarity=0.038 Sum_probs=123.0 Template_Neff=11.400
31820
31821 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
31822 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
31823 ....+.++||++.|..+. .++..+..+++.++++. |+++++...|+..++. ...+.
31824 T Consensus 26 ~~~~~~~~Ig~v~~~~~~------------~~~~~~~~g~~~~~~~~--------g~~v~~~~~d~~~~~~----~~~~~ 81 (337)
31825 T 4Z0N_A 26 KKDTSKITLGVTYYKFDD------------NFLAGMRNDMIQIAKEK--------YPNIELLNNDSQNSQS----ILNDQ 81 (337)
31826 T ss_dssp -----CEEEEEEESCTTC------------HHHHHHHHHHHHHHHHH--------CTTEEEEEEECTTCHH----HHHHH
31827 T ss_pred CCCCCCeEEEEEEccCCC------------HHHHHHHHHHHHHHHHH--------CCCeEEEeCCCCCCHH----HHHHH
31828 Confidence 345568999999986542 25567778888887775 3445666555443322 23333
31829
31830
31831 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
31832 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
31833 +++++. ++++++|+...+... ......+...++|+|..+...+..... ..++++++.++
31834 T Consensus 82 i~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~~~-~~~~~~~v~~d 141 (337)
31835 T 4Z0N_A 82 IEVLIN-------------------KGVNVLVINLVDPTAGQSVIDKAKAANIPIILFNKDPGVDALN-SYDKAWYVGTT 141 (337)
31836 T ss_dssp HHHHHH-------------------TTCSEEEECCSSTTCHHHHHHHHHHHTCCEEEESSCCCHHHHT-TCTTEEEEECC
31837 T ss_pred HHHHHH-------------------cCCCEEEEecCCccchHHHHHHHHHCCCCEEEEccCCCCcccc-ccccceEEecC
31838 Confidence 444332 478887765433322 244556677899999887654321110 13456677777
31839
31840
31841 Q NP_000836.2 199 DSYQAQAMVDIVTA------------LGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEK 264 (908)
31842 Q Consensus 199 ~~~~~~~~~~~l~~------------~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~ 264 (908)
31843 ....++.+++++.+ .+.++++++.. ++.+...+.+++++.+++. ++.+..........+..+...
31844 T Consensus 142 ~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~ 220 (337)
31845 T 4Z0N_A 142 PKDSGILQGQVIEKAWLANPAYDLNGDGVIQYVMLFGEPGQPDAEARTKYSIEYLNEK-GIKTEELHKDIANWDAAQAKD 220 (337)
31846 T ss_dssp HHHHHHHHHHHHHHHHHHCGGGCTTCSSSEEEEEEECCTTCHHHHHHHHHHHHHHHHT-TCCEEEEEEEECTTCHHHHHH
31847 T ss_pred chHHHHHHHHHHHHHHhcCCccccCCCCeeEEEEEECCCCCcCHHHHHHHHHHHHHhc-CCCceeecccccCCCHHHHHH
31848 Confidence 77777777776643 35678998875 3455667778888887764 343321100100011123344
31849
31850
31851 Q NP_000836.2 265 IIKRLLET---PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSD 309 (908)
31852 Q Consensus 265 ~~~~l~~~---~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~ 309 (908)
31853 .++++++. .++++|+... +..+..+++++++.|. ++.+++.+
31854 T Consensus 221 ~~~~~l~~~~~~~~~~i~~~~-~~~a~~~~~~~~~~g~--~v~vi~~d 265 (337)
31855 T 4Z0N_A 221 KMDAWLSGPNANKIEVVIANN-DGMALGAVESIKAVKK--ELPVFGVD 265 (337)
31856 T ss_dssp HHHHHHHSTTGGGCCEEEESS-HHHHHHHHHHHHHTTC--CCCEECSB
31857 T ss_pred HHHHHHcCCCCCCccEEEECC-hHHHHHHHHHHHHcCC--CCCEEEec
31858 Confidence 55555431 2356666553 4455667777777663 34444443
31859
31860
31861 No 174
31862 >4PE6_B solute binding protein; Structural Genomics, PSI-Biology, Midwest Center; HET: MSE, LTH; 1.86A {Thermobispora bispora}
31863 Probab=97.34 E-value=2.3e-07 Score=95.76 Aligned_cols=210 Identities=10% Similarity=-0.060 Sum_probs=116.5 Template_Neff=10.900
31864
31865 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
31866 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
31867 ...++.++||++.|.... .++.....+++.++++.|..++. +++.+...|+..++. ...+.
31868 T Consensus 13 ~~~~~~~~Igvv~~~~~~------------~~~~~~~~g~~~a~~~~~~~gg~---~~~~~~~~d~~~~~~----~~~~~ 73 (341)
31869 T 4PE6_B 13 QAEGDKPFIALSNGFIGN------------GWRQTMIAKFEEAAKQAQADGLI---GKYKVVNAPGNNSAT----EQVAQ 73 (341)
31870 T ss_dssp -----CCEEEEEESCCSS------------HHHHHHHHHHHHHHHHHHHTTSC---SEEEEEECCTTTCHH----HHHHH
31871 T ss_pred HHhCCCCEEEEEccccCC------------HHHHHHHHHHHHHHHHhcccCCc---ceEEEEeCCCCCCHH----HHHHH
31872 Confidence 455678999999986322 35677889999999998865432 345555555443322 23333
31873
31874
31875 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAA-ASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
31876 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~-~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
31877 +++++. .+++++|+.. .+.........+...++|+|..+...+. ++.+....+
31878 T Consensus 74 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-------~~~~~~~~~ 127 (341)
31879 T 4PE6_B 74 IKSLLL-------------------QKPDALLINPASPTALQPVIQQACDAGVKVVVFDSAIDA-------PCAYILQNS 127 (341)
31880 T ss_dssp HHHHHT-------------------TCCSEEEEECSSSSTTHHHHHHHHHTTCEEEEESSCCCC-------TTSEEEEEC
31881 T ss_pred HHHHHh-------------------cCCCEEEECCCChhhhHHHHHHHHHCCCEEEEeCCCCCC-------CCcEEeeCC
31882 Confidence 444332 4778777643 3322234445566789999987764331 233444444
31883
31884
31885 Q NP_000836.2 199 DSYQAQAMVDIVTALG--WNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-P 273 (908)
31886 Q Consensus 199 ~~~~~~~~~~~l~~~~--~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~ 273 (908)
31887 ....++.+++++.+.+ .++++++.. ++.++..+.++|++.+++..++++....... .+..+....++++++. .
31888 T Consensus 128 ~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~ 205 (341)
31889 T 4PE6_B 128 FVDWATYAAKPVLESIGGKGNVIVVRGVVGSQPEAEMYETTKKILAEYPQVKTVATVTGM--CDGATAQKAVLGVLPSVS 205 (341)
31890 T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECSTTSHHHHHHHHHHHHHHHTCTTEEEEEEEECT--TCHHHHHHHHHHHGGGSC
31891 T ss_pred HHHHHHHHHHHHHHHhCCCeeEEEEecCCCChHHHHHHHHHHHHHHhCCCceEEEEEeCC--CCHHHHHHHHHHhHhhCC
31892 Confidence 4455667777765443 678998885 3455667788888887753124443221111 1122344455555431 2
31893
31894
31895 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKLNQ 299 (908)
31896 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
31897 ++++|++.. + . ..+++++++.|.
31898 T Consensus 206 ~~~~i~~~~-d-~-~~~~~al~~~g~ 228 (341)
31899 T 4PE6_B 206 TVDAVIGCG-D-G-YGVAQAFATAGK 228 (341)
31900 T ss_dssp CCCEEECSS-C-H-HHHHHHHHHHTC
31901 T ss_pred CCCEEEEcC-c-H-HHHHHHHHHCCC
31902 Confidence 355555543 2 2 567777777765
31903
31904
31905 No 175
31906 >2X7X_A SENSOR PROTEIN (E.C.2.7.13.3); TRANSFERASE, SENSOR HISTIDINE KINASE; HET: PO4, FRU; 2.64A {BACTEROIDES THETAIOTAOMICRON}
31907 Probab=97.34 E-value=2.4e-07 Score=94.96 Aligned_cols=213 Identities=11% Similarity=0.088 Sum_probs=118.4 Template_Neff=11.000
31908
31909 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
31910 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
31911 .+++++||++.|.+. .++.....+++.++.+.+ | +++.+.|+..++. ...+.++
31912 T Consensus 3 ~~~~~~Ig~v~~~~~-------------~~~~~~~~g~~~~~~~~~-------g--i~l~~~~~~~~~~----~~~~~~~ 56 (325)
31913 T 2X7X_A 3 DTPHFRIGVAQCSDD-------------SWRHKMNDEILREAMFYN-------G--VSVEIRSAGDDNS----KQAEDVH 56 (325)
31914 T ss_dssp ---CCEEEEEESCCS-------------HHHHHHHHHHHHHHTTSS-------S--CEEEEEECTTCHH----HHHHHHH
31915 T ss_pred CCCCeEEEEEECCCC-------------HHHHHHHHHHHHHHHHhC-------C--eEEEEEECCCCHH----HHHHHHH
31916 Confidence 356789999998732 244455666665443321 2 3445555543322 2223344
31917
31918
31919 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
31920 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
31921 +++. ++++++|+...+... ......+...++|+|..+...+. .++++++.+++.
31922 T Consensus 57 ~l~~-------------------~~vd~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~ 111 (325)
31923 T 2X7X_A 57 YFMD-------------------EGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRKILS------DKYTAYIGADNY 111 (325)
31924 T ss_dssp HHHH-------------------TTCSEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCCSS------SCSSEEEEECHH
31925 T ss_pred HHHH-------------------cCCCEEEEcCCCCCCcHHHHHHHHHCCCCEEEECCCCCC------CCccEEEEcCHH
31926 Confidence 3332 478887765444332 23445566789999987654321 245677888877
31927
31928
31929 Q NP_000836.2 201 YQAQAMVDIVTA--LGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNA 275 (908)
31930 Q Consensus 201 ~~~~~~~~~l~~--~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 275 (908)
31931 ..++.+++++.+ .+.++++++.... .++..+.+++++.+++.+++++....... .+..+....+++++. ..++
31932 T Consensus 112 ~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 189 (325)
31933 T 2X7X_A 112 EIGRSVGNYIASSLKGKGNIVELTGLSGSTPAMERHQGFMAAISKFPDIKLIDKADAA--WERGPAEIEMDSMLRRHPKI 189 (325)
31934 T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEESCTTSHHHHHHHHHHHHHHHTCTEEEEEEEEECT--TSHHHHHHHHHHHHHHCSCC
31935 T ss_pred HHHHHHHHHHHHHcCCCeEEEEEEcCCCChHHHHHHHHHHHHHhcCCCcEEEEEeeCC--CCccHHHHHHHHHHHhCCCC
31936 Confidence 778888888765 5778999998533 35566777888777654223332211111 111233344455542 1256
31937
31938
31939 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
31940 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
31941 ++|++.. +..+..+++++++.|+..++.+++.
31942 T Consensus 190 ~~i~~~~-~~~a~~~~~al~~~g~~~~v~ii~~ 221 (325)
31943 T 2X7X_A 190 DAVYAHN-DRIAPGAYQAAKMAGREKEMIFVGI 221 (325)
31944 T ss_dssp CEEEESS-TTHHHHHHHHHHHTTCTTSSEEEEE
31945 T ss_pred CEEEECC-hhHHHHHHHHHHHcCCCCCCEEEEE
31946 Confidence 7776654 3456677788887776323444443
31947
31948
31949 No 176
31950 >2X7X_B SENSOR PROTEIN (E.C.2.7.13.3); TRANSFERASE, SENSOR HISTIDINE KINASE; HET: FRU, PO4; 2.64A {BACTEROIDES THETAIOTAOMICRON}
31951 Probab=97.34 E-value=2.4e-07 Score=94.96 Aligned_cols=213 Identities=11% Similarity=0.088 Sum_probs=118.4 Template_Neff=11.000
31952
31953 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
31954 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
31955 .+++++||++.|.+. .++.....+++.++.+.+ | +++.+.|+..++. ...+.++
31956 T Consensus 3 ~~~~~~Ig~v~~~~~-------------~~~~~~~~g~~~~~~~~~-------g--i~l~~~~~~~~~~----~~~~~~~ 56 (325)
31957 T 2X7X_B 3 DTPHFRIGVAQCSDD-------------SWRHKMNDEILREAMFYN-------G--VSVEIRSAGDDNS----KQAEDVH 56 (325)
31958 T ss_dssp ---CEEEEEEESCCS-------------HHHHHHHHHHHHHHTTST-------T--EEEEEEECTTCHH----HHHHHHH
31959 T ss_pred CCCCeEEEEEECCCC-------------HHHHHHHHHHHHHHHHhC-------C--eEEEEEECCCCHH----HHHHHHH
31960 Confidence 356789999998732 244455666665443321 2 3445555543322 2223344
31961
31962
31963 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
31964 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
31965 +++. ++++++|+...+... ......+...++|+|..+...+. .++++++.+++.
31966 T Consensus 57 ~l~~-------------------~~vd~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~ 111 (325)
31967 T 2X7X_B 57 YFMD-------------------EGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRKILS------DKYTAYIGADNY 111 (325)
31968 T ss_dssp HHHH-------------------TTCSEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCCSS------SCSSEEEEECHH
31969 T ss_pred HHHH-------------------cCCCEEEEcCCCCCCcHHHHHHHHHCCCCEEEECCCCCC------CCccEEEEcCHH
31970 Confidence 3332 478887765444332 23445566789999987654321 245677888877
31971
31972
31973 Q NP_000836.2 201 YQAQAMVDIVTA--LGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNA 275 (908)
31974 Q Consensus 201 ~~~~~~~~~l~~--~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 275 (908)
31975 ..++.+++++.+ .+.++++++.... .++..+.+++++.+++.+++++....... .+..+....+++++. ..++
31976 T Consensus 112 ~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 189 (325)
31977 T 2X7X_B 112 EIGRSVGNYIASSLKGKGNIVELTGLSGSTPAMERHQGFMAAISKFPDIKLIDKADAA--WERGPAEIEMDSMLRRHPKI 189 (325)
31978 T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEESCTTSHHHHHHHHHHHHHHTTCTTEEEEEEEECT--TSHHHHHHHHHHHHHHCSCC
31979 T ss_pred HHHHHHHHHHHHHcCCCeEEEEEEcCCCChHHHHHHHHHHHHHhcCCCcEEEEEeeCC--CCccHHHHHHHHHHHhCCCC
31980 Confidence 778888888765 5778999998533 35566777888777654223332211111 111233344455542 1256
31981
31982
31983 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
31984 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
31985 ++|++.. +..+..+++++++.|+..++.+++.
31986 T Consensus 190 ~~i~~~~-~~~a~~~~~al~~~g~~~~v~ii~~ 221 (325)
31987 T 2X7X_B 190 DAVYAHN-DRIAPGAYQAAKMAGREKEMIFVGI 221 (325)
31988 T ss_dssp CEEEESS-TTHHHHHHHHHHHTTCGGGSEEEEE
31989 T ss_pred CEEEECC-hhHHHHHHHHHHHcCCCCCCEEEEE
31990 Confidence 7776654 3456677788887776323444443
31991
31992
31993 No 177
31994 >4RXM_A Possible sugar ABC superfamily ATP; TRANSPORTER, ABC-TYPE, ENZYME FUNCTION INITIATIVE; HET: BGC, INS; 1.75A {Mannheimia haemolytica}
31995 Probab=97.33 E-value=2.4e-07 Score=92.94 Aligned_cols=205 Identities=12% Similarity=0.043 Sum_probs=117.4 Template_Neff=12.100
31996
31997 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
31998 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
31999 .++++||++.|..+. .++.....+++.++++.+ +++.+.|...++. ...+.+++
32000 T Consensus 2 ~~~~~Ig~v~~~~~~------------~~~~~~~~g~~~a~~~~~----------~~~~~~~~~~~~~----~~~~~~~~ 55 (292)
32001 T 4RXM_A 2 MKDELVVFSLPNLSS------------PFEVQLQKVAVETSKKLE----------IKLQVLDGQSSST----KQASDLEN 55 (292)
32002 T ss_dssp CCCCEEEEEESCSSS------------HHHHHHHHHHHHHHHHHT----------CEEEEEECTTCHH----HHHHHHHH
32003 T ss_pred CcccEEEEecCCCCC------------HHHHHHHHHHHHHHHHcC----------CEEEEEcCCCCHH----HHHHHHHH
32004 Confidence 357899999997542 255677788888877642 3445555543322 22233343
32005
32006
32007 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
32008 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
32009 ++. ++++++|+...+... ......+...++|+|..+...+. .++++++.+++..
32010 T Consensus 56 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~------~~~~~~v~~d~~~ 110 (292)
32011 T 4RXM_A 56 AIT-------------------RGAKGIIISPNDVNAISGAVEEIIKEKIPAATLDRKVES------SKPVPHFGANNYT 110 (292)
32012 T ss_dssp HHH-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCCC------SSCCCEEEECHHH
32013 T ss_pred HHh-------------------cCCCEEEEecCCHhhHHHHHHHHHHCCCCEEEeCCCCCC------CCCccEEecCchH
32014 Confidence 332 477877764433322 24445566789999987764321 2356677777777
32015
32016
32017 Q NP_000836.2 202 QAQAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE--TPNA 275 (908)
32018 Q Consensus 202 ~~~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~--~~~~ 275 (908)
32019 .++.+++++.+. +.++++++.. +..++..+.+++++.+++. +..+........+.+..+....+.++++ ..++
32020 T Consensus 111 ~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (292)
32021 T 4RXM_A 111 GGQEVAKAVKAKYPNGAKIILLTGQPGSTSNIERTKGIRDELAAG-GDKYKIVVDQTGNWLRSEGLRIIESVLPTLKEKP 189 (292)
32022 T ss_dssp HHHHHHHHHHHHSTTCEEEEEEECCTTCHHHHHHHHHHHHHHHHH-CTTEEEEEEEECTTCHHHHHHHHHHHGGGCSSCC
32023 T ss_pred HHHHHHHHHHHHCCCCCeEEEEECCCCChhHHHHHHHHHHHHHhC-CCceEEEEeecCCCCHHHHHHHHHHHHHHcCCCC
32024 Confidence 788888887543 5668888775 3445667788888888764 3332211111100111122233334331 1357
32025
32026
32027 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQS 300 (908)
32028 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32029 |+|++.. +..+..+++++++.|..
32030 T Consensus 190 d~i~~~~-~~~a~~~~~~~~~~g~~ 213 (292)
32031 T 4RXM_A 190 EVIISAN-DDMALGAIEALRSQGLK 213 (292)
32032 T ss_dssp SEEEESS-HHHHHHHHHHHHHTTCC
32033 T ss_pred CEEEECC-hHHHHHHHHHHHHCCCC
32034 Confidence 8865543 44566778888877763
32035
32036
32037 No 178
32038 >2HSG_A Glucose-resistance amylase regulator; CCPA, TRANSCRIPTIONAL REGULATOR, TRANSCRIPTION REGULATOR; 2.5A {Bacillus megaterium} SCOP: a.35.1.5, c.93.1.1
32039 Probab=97.33 E-value=2.5e-07 Score=95.08 Aligned_cols=204 Identities=11% Similarity=0.117 Sum_probs=120.7 Template_Neff=11.700
32040
32041 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
32042 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
32043 ..+.++||++.|..+. .++..+..+++.++++.+ +++.+.|...++ ....+.++
32044 T Consensus 57 ~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~ 110 (332)
32045 T 2HSG_A 57 SKKTTTVGVIIPDISN------------IFYAELARGIEDIATMYK----------YNIILSNSDQNQ----DKELHLLN 110 (332)
32046 T ss_pred cCCCCEEEEEeCCCCC------------hHHHHHHHHHHHHHHHhC----------CEEEEEeCCCCH----HHHHHHHH
32047 Confidence 4568899999987542 245667778888777642 233444543332 12233444
32048
32049
32050 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
32051 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
32052 +++. +++|++|+...+. .......+...++|+|.++...+ .+..+.+.+++..
32053 T Consensus 111 ~l~~-------------------~~~d~ii~~~~~~-~~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~~~~~ 163 (332)
32054 T 2HSG_A 111 NMLG-------------------KQVDGIIFMSGNV-TEEHVEELKKSPVPVVLAASIES-------TNQIPSVTIDYEQ 163 (332)
32055 T ss_pred HHHH-------------------cCCCEEEECCCCC-CHHHHHHHHHcCCCEEEeCCCCC-------CCCCcEEEEChHH
32056 Confidence 4332 4788888754443 23444556678999998765322 2345566677767
32057
32058
32059 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGN---YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARA 277 (908)
32060 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~---~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
32061 .+..+++++.+.+.++++++..+.. ++..+.++|++.+++. ++.+.....+..+.+..+....+++++. ..++|+
32062 T Consensus 164 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 242 (332)
32063 T 2HSG_A 164 AAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTES-GLPVRDSYIVEGDYTYDSGIEAVEKLLEEDEKPTA 242 (332)
32064 T ss_pred HHHHHHHHHHHCCCCcEEEEeCCcccChhHHHHHHHHHHHHHHC-CCCCCHHHcccCCCCHHHHHHHHHHHHHcCCCCCE
32065 Confidence 7777888876668889999985433 4567788888888764 3443321111110112233444555542 136788
32066
32067
32068 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
32069 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32070 |++.. +..+..+++++++.|+.
32071 T Consensus 243 i~~~~-~~~a~~~~~~l~~~g~~ 264 (332)
32072 T 2HSG_A 243 IFVGT-DEMALGVIHGAQDRGLN 264 (332)
32073 T ss_pred EEECC-HHHHHHHHHHHHHCCCC
32074 Confidence 87664 44566778888887763
32075
32076
32077 No 179
32078 >1ZHH_A Autoinducer 2-binding periplasmic protein luxP; PERIPLASMIC BINDING PROTEIN, PER/ARNT/SIMPLE-MINDED (PAS); HET: NHE; 1.94A {Vibrio harveyi} SCOP: c.93.1.1
32079 Probab=97.33 E-value=2.5e-07 Score=95.67 Aligned_cols=220 Identities=11% Similarity=0.031 Sum_probs=124.3 Template_Neff=11.500
32080
32081 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGV--RILDTCSRDTYALEQSLTF 119 (908)
32082 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~--~~~d~~~~~~~a~~~~~~~ 119 (908)
32083 ..+.++||++.|..+.. .+......+++.++++.+ +++++ .+.|+..++. ...+.
32084 T Consensus 42 ~~~~~~Ig~i~~~~~~~-----------~~~~~~~~g~~~~~~~~g--------~~~~l~~~~~d~~~~~~----~~~~~ 98 (344)
32085 T 1ZHH_A 42 TQRPIKISVVYPGQQVS-----------DYWVRNIASFEKRLYKLN--------INYQLNQVFTRPNADIK----QQSLS 98 (344)
32086 T ss_dssp CSSCEEEEEEEESSCSS-----------CHHHHHHHHHHHHHHHTT--------CCEEEEEEEECTTSCHH----HHHHH
32087 T ss_pred CCCCeEEEEEeCCCCCC-----------HHHHHHHHHHHHHHHHcC--------CcEEEEEeecCCCCCHH----HHHHH
32088 Confidence 56789999999975321 233467788888888764 23333 4455444422 23333
32089
32090
32091 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRL-FKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
32092 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~-~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
32093 +++++. ++++++|+...+.........+.. .++|+|..+...+.... ...++++++.++
32094 T Consensus 99 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~~-~~~~~~~~v~~d 158 (344)
32095 T 1ZHH_A 99 LMEALK-------------------SKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNITTPVREW-DKHQPFLYVGFD 158 (344)
32096 T ss_dssp THHHHH-------------------TTCSEEEECSCTTTTHHHHHHHHHHCSSEEEEESCCSCBGGG-TTSCCSEEEECC
32097 T ss_pred HHHHHh-------------------cCCCEEEEeCCchHhHHHHHHHHHhCCCeEEEEeCCCCchhh-ccCCCeEEEEec
32098 Confidence 444332 478888876543333333444444 79999987654432111 113567777788
32099
32100
32101 Q NP_000836.2 199 DSYQAQAMVDIVTALGWN--YVSTLASE-GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PN 274 (908)
32102 Q Consensus 199 ~~~~~~~~~~~l~~~~~~--~v~ii~~~-~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 274 (908)
32103 +...++.+++++.+.+.+ +++++..+ +.++..+.++|++.+++.+++.+....... .+..+....++++++. .+
32104 T Consensus 159 ~~~~~~~~~~~l~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~ 236 (344)
32105 T 1ZHH_A 159 HAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTK--ATKQSGYDAAKASLAKHPD 236 (344)
32106 T ss_dssp HHHHHHHHHHHHHHHSCTTCEEEEECCSTTHHCCCCCCHHHHHHHHHHCCEEEEEECCC--SSHHHHHHHHHHHHHHCCC
32107 T ss_pred cHHHHHHHHHHHHHhCCCCceEEEEEcCCCchHHHHHHHHHHHHHhCCCcEEEEeeecC--CCHHHHHHHHHHHHHHCCC
32108 Confidence 777788888887654443 48888754 456667778888877754224433211111 1222344555555431 23
32109
32110
32111 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
32112 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
32113 +++|+.. ++..+..+++++++.|. .++.+++.
32114 T Consensus 237 ~~~i~~~-~~~~a~~~~~~l~~~g~-~~~~v~~~ 268 (344)
32115 T 1ZHH_A 237 VDFIYAC-STDVALGAVDALAELGR-EDIMINGW 268 (344)
32116 T ss_dssp CSEEEES-SHHHHHHHHHHHHHHTC-TTSEEBCS
32117 T ss_pred ccEEEEC-ChHHHHHHHHHHHHcCC-CCcEEEEe
32118 Confidence 4555544 34455668888888776 23344443
32119
32120
32121 No 180
32122 >5ULB_A Putative sugar ABC transporter; ABC transporter, Methylthioribose-binding protein, Structural; HET: MSE, 8GG, 8GA; 1.28A {Yersinia enterocolitica subsp. enterocolitica 8081}
32123 Probab=97.32 E-value=2.6e-07 Score=95.13 Aligned_cols=217 Identities=12% Similarity=0.087 Sum_probs=123.7 Template_Neff=11.700
32124
32125 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSL 117 (908)
32126 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
32127 ......+.++||++.|..+. .++..+..+++.++++.| +++.+.|+..+. +...
32128 T Consensus 12 ~~~~~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~----~~~~ 65 (337)
32129 T 5ULB_A 12 AIAKHQGQIKIAVIRNLGSD------------DNTTQFLSGVLKEGKKLG----------FKVDTFLSNGDD----ARFQ 65 (337)
32130 T ss_dssp HHHTCSSCCEEEEEESSCSC------------HHHHHHHHHHHHHHHHHT----------CEEEEEECTTCH----HHHH
32131 T ss_pred HHHhccCCcEEEEEEeCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEEeCCCCH----HHHH
32132 Confidence 34566788999999997653 245677788888887753 334445544332 1223
32133
32134
32135 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAA-SSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVV 196 (908)
32136 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~-s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~ 196 (908)
32137 +.+++++. .+++++|+... +.........+...++|+|..+...+. ..++++++.
32138 T Consensus 66 ~~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~~~~ 121 (337)
32139 T 5ULB_A 66 DFVNQAIS-------------------QKYDGIILSQGRDPYSTELVKRIVANGIAVSVFDTAIQG-----DIPGLTVTQ 121 (337)
32140 T ss_dssp HHHHHHHH-------------------TTCSEEEEESCCTTTHHHHHHHHHHTTCEEEEESCCCCS-----CCTTCEEEE
32141 T ss_pred HHHHHHHh-------------------CCCCEEEEcCCCCccCHHHHHHHHHCCCeEEEEccCCCC-----CCCCeEEEe
32142 Confidence 33444332 47888776543 222234445566789999987654331 124556666
32143
32144
32145 Q NP_000836.2 197 PPDSYQAQAMVDIVTA--LGWNYVSTLA-SEGNYGESGVEAFTQISREIGGVCIAQSQK--IPREPRPGEFEKIIKRLLE 271 (908)
32146 Q Consensus 197 ~~~~~~~~~~~~~l~~--~~~~~v~ii~-~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~--~~~~~~~~~~~~~~~~l~~ 271 (908)
32147 +++...+..+++++.+ .+.++++++. .+..++..+.++|++.+++.+++.+..... +. ....+....+++++.
32148 T Consensus 122 ~~~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~ 199 (337)
32149 T 5ULB_A 122 QDDASLTNESFGQLVKDFNGKANIIKLWVAGFPPMERRQAAYQALLKQNPGITELESIGAVSS--DVQGDTANKVGAVLA 199 (337)
32150 T ss_dssp ECHHHHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHHHCTTEEEEEEECCCCT--THHHHHHHHHHHHHH
32151 T ss_pred cCchHHHHHHHHHHHHhhCCCccEEEEEcCCChhHHHHHHHHHHHHHhCCCcEEEEEEccCCC--CCCcchHHHHHHHHH
32152 Confidence 6666566666666544 4678899884 334556677788888777642244332111 11 111123344555542
32153
32154
32155 Q NP_000836.2 272 T-P--NARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
32156 Q Consensus 272 ~-~--~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
32157 . . ++++|++.. +..+..+++++++.|+. ++.+++.
32158 T Consensus 200 ~~~~~~~~~i~~~~-~~~a~~~~~al~~~g~~-~i~v~~~ 237 (337)
32159 T 5ULB_A 200 KYPKGKIDAIWGTW-DAFTQGAYKALQENGRT-EIKLYSI 237 (337)
32160 T ss_dssp HSCTTSCCEEEESS-HHHHHHHHHHHHHTTCT-TSEEEEE
32161 T ss_pred hCCCCCeeEEEECC-chHHHHHHHHHHHcCCC-CCEEEEE
32162 Confidence 1 1 347776664 44466788888887762 3444443
32163
32164
32165 No 181
32166 >2FEP_A Catabolite control protein A, Phosphocarrier; CcpA, HPr, transcriptional regulator, TRANSCRIPTION; HET: SO4; 2.45A {Bacillus subtilis}
32167 Probab=97.32 E-value=2.7e-07 Score=92.60 Aligned_cols=206 Identities=9% Similarity=0.056 Sum_probs=118.1 Template_Neff=11.700
32168
32169 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
32170 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
32171 ....+..+||++.|..+. .++.....+++.++++.+ +++ .+.+...++ ....+.
32172 T Consensus 11 ~~~~~~~~igvi~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~--~~~~~~~~~----~~~~~~ 64 (289)
32173 T 2FEP_A 11 GSSKKTTTVGVIIPDISS------------IFYSELARGIEDIATMYK--------YNI--ILSNSDQNM----EKELHL 64 (289)
32174 T ss_dssp -----CCEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT--------CEE--EEEECTTCH----HHHHHH
32175 T ss_pred CCCCCccEEEEEeCCCCc------------HHHHHHHHHHHHHHHHcC--------CcE--EEEeCCCCH----HHHHHH
32176 Confidence 345678899999987542 255677788887777642 333 334433332 222333
32177
32178
32179 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
32180 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
32181 +++++. ++++++|+...+.. ......+...++|+|..+...+ .+..+.+..++
32182 T Consensus 65 ~~~l~~-------------------~~~d~ii~~~~~~~-~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~ 117 (289)
32183 T 2FEP_A 65 LNTMLG-------------------KQVDGIVFMGGNIT-DEHVAEFKRSPVPIVLAASVEE-------QEETPSVAIDY 117 (289)
32184 T ss_dssp HHHHHH-------------------TTCSEEEECCSCCC-HHHHHHHHHSSSCEEEESCCCT-------TCCSCEEECCH
32185 T ss_pred HHHHhc-------------------CCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEcCCCC-------CCCCCEEEeCH
32186 Confidence 443332 47888887554433 3444556678999998765432 13455666777
32187
32188
32189 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGNYG---ESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNA 275 (908)
32190 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~~~---~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 275 (908)
32191 ...++.+++++.+.+.++++++..+..++ ..+.+++++.+++. ++.+........+.+..+....++++++ ..++
32192 T Consensus 118 ~~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (289)
32193 T 2FEP_A 118 EQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEA-NLPFNEQFVAEGDYTYDSGLEALQHLMSLDKKP 196 (289)
32194 T ss_dssp HHHHHHHHHHHHHTTCSSEEEEESCTTSHCCCCCCHHHHHHHHHHT-TCCCCGGGEEECCSCHHHHHHHHHHHTTSSSCC
32195 T ss_pred HHHHHHHHHHHHHCCCCcEEEEeCCCCCCccHHHHHHHHHHHHHHC-CCCCCHHHhccCCCCcchHHHHHHHHHhcCCCC
32196 Confidence 77777888887666888999998654433 56677888877764 2332211111100111233344555542 1367
32197
32198
32199 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQS 300 (908)
32200 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32201 |+|++.. +..+..+++++++.|+.
32202 T Consensus 197 d~i~~~~-~~~~~~~~~~l~~~g~~ 220 (289)
32203 T 2FEP_A 197 TAILSAT-DEMALGIIHAAQDQGLS 220 (289)
32204 T ss_dssp SEEEESS-HHHHHHHHHHHHHTTCC
32205 T ss_pred CEEEECC-cHHHHHHHHHHHHCCCC
32206 Confidence 8887664 44567778888877764
32207
32208
32209 No 182
32210 >2IKS_A DNA-binding transcriptional dual regulator; DNA-binding transcriptional dual regulator, Escherichia; 1.85A {Escherichia coli}
32211 Probab=97.31 E-value=2.7e-07 Score=92.64 Aligned_cols=204 Identities=11% Similarity=0.090 Sum_probs=117.9 Template_Neff=12.100
32212
32213 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
32214 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
32215 ...+.++||++.|..+. .++.....+++.++++.+ +++.+.+...+. +...+.+
32216 T Consensus 16 ~~~~~~~Ig~~~~~~~~------------~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~ 69 (293)
32217 T 2IKS_A 16 RAGRTRSIGLVIPDLEN------------TSYTRIANYLERQARQRG----------YQLLIACSEDQP----DNEMRCI 69 (293)
32218 T ss_dssp --CCCCEEEEEESCSCS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHH
32219 T ss_pred hcCCCCEEEEEecCCCC------------hHHHHHHHHHHHHHHHcC----------CeEEEEeCCCCH----HHHHHHH
32220 Confidence 44578999999987542 245667778887777642 233344443332 2223334
32221
32222
32223 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
32224 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
32225 ++++. ++++++|+...+.........+...++|+|..+...+. +..+.+..++.
32226 T Consensus 70 ~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~-------~~~~~~~~~~~ 123 (293)
32227 T 2IKS_A 70 EHLLQ-------------------RQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDR-------EHFTSVVGADQ 123 (293)
32228 T ss_dssp HHHHH-------------------TTCSEEEECCSSCTTCHHHHTTTTSSSCEEEEESCCCT-------TTCEEEEECHH
32229 T ss_pred HHHHh-------------------CCCCEEEECCCCCCCchHHHHHHcCCCCEEEEcCCcCc-------ccCcEEEeCcH
32230 Confidence 43332 47888887554433333445566789999987764331 23455666666
32231
32232
32233 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
32234 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
32235 ..+..+++++.+.+.++++++.. +..+...+.++|++.+++. ++.+....... .+..+....++++++. .++|+
32236 T Consensus 124 ~~~~~~~~~l~~~g~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~ 200 (293)
32237 T 2IKS_A 124 DDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDD-PREVHFLYANS--YEREAAAQLFEKWLETHPMPQA 200 (293)
32238 T ss_dssp HHHHHHHHHHHTSCCSSEEEEEECTTSHHHHHHHHHHHHHHTTC-CCCEEEEEESS--SCHHHHHHHHHHHTTTSCCCSE
32239 T ss_pred HHHHHHHHHHHhCCCcEEEEEeCCccchhHHHHHHHHHHHHHhC-CCceeeeecCC--CCHHHHHHHHHHHHHhCCCCCE
32240 Confidence 66777788776667889999985 3345666778888887764 34433211111 1112233445555421 24777
32241
32242
32243 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
32244 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32245 |++.. +..+..+++++.+.|..
32246 T Consensus 201 i~~~~-~~~a~~~~~~~~~~~~~ 222 (293)
32247 T 2IKS_A 201 LFTTS-FALLQGVMDVTLRRDGK 222 (293)
32248 T ss_dssp EEESS-HHHHHHHHHHHHHHHSS
32249 T ss_pred EEECC-HHHHHHHHHHHHHCCCC
32250 Confidence 77654 44456677777776653
32251
32252
32253 No 183
32254 >3D8U_A PurR transcriptional regulator; APC91343.1, PurR, transcriptional regulator, Vibrio; HET: MSE; 2.88A {Vibrio parahaemolyticus}
32255 Probab=97.31 E-value=2.7e-07 Score=91.46 Aligned_cols=202 Identities=12% Similarity=0.082 Sum_probs=116.7 Template_Neff=12.400
32256
32257 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
32258 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
32259 ++++||++.|.... .++..+..+++.++++.+ +++.+.++..++ +...+.++++
32260 T Consensus 2 ~~~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~~~ 55 (275)
32261 T 3D8U_A 2 NAYSIALIIPSLFE------------KACAHFLPSFQQALNKAG----------YQLLLGYSDYSI----EQEEKLLSTF 55 (275)
32262 T ss_dssp --CEEEEEESCSSC------------HHHHHHHHHHHHHHHHTS----------CEECCEECTTCH----HHHHHHHHHH
32263 T ss_pred CcceEEEEeCccCC------------hhHHHHHHHHHHHHHHcC----------CEEEEEeCCCCH----HHHHHHHHHH
32264 Confidence 46889999987532 245667778887777642 233444443332 1223334433
32265
32266
32267 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
32268 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
32269 +. .+++++|+...+... .....+...++|+|..+...+ .++.+.+..+....+
32270 T Consensus 56 ~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~ip~v~~~~~~~-------~~~~~~v~~d~~~~~ 108 (275)
32271 T 3D8U_A 56 LE-------------------SRPAGVVLFGSEHSQ-RTHQLLEASNTPVLEIAELSS-------KASYLNIGVDHFEVG 108 (275)
32272 T ss_dssp HT-------------------SCCCCEEEESSCCCH-HHHHHHHHHTCCEEEESSSCS-------SSSSEEECBCHHHHH
32273 T ss_pred HH-------------------hCCCEEEEeCCCCCH-HHHHHHHhCCCCEEEEcCCCC-------CCCCcEEEeCHHHHH
32274 Confidence 32 478888875544333 344556678999988765432 134566677777777
32275
32276
32277 Q NP_000836.2 204 QAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAVIM 280 (908)
32278 Q Consensus 204 ~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~viv~ 280 (908)
32279 +.+++++.+.+.++++++..+.. .+..+.++|++.+++. ++.+..........+..+....++++++ ..++|+|++
32280 T Consensus 109 ~~~~~~l~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~i~~ 187 (275)
32281 T 3D8U_A 109 KACTRHLIEQGFKNVGFIGARGNHSTLQRQLHGWQSAMIEN-YLTPDHFLTTHEAPSSQLGAEGLAKLLLRDSSLNALVC 187 (275)
32282 T ss_dssp HHHHHHHHTTTCCCEEEEECSCSSHHHHHHHHHHHHHHHHT-TCCCCCEEECSSCCCHHHHHHHHHHHHTTCTTCCEEEE
32283 T ss_pred HHHHHHHHHCCCCcEEEEecCCCchHHHHHHHHHHHHHHHC-CCCcceEEecCCCCchhhHHHHHHHHHhcCCCCCEEEE
32284 Confidence 78888876668889999985443 4556777888877764 3433211111100111223344555542 134788876
32285
32286
32287 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQS 300 (908)
32288 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~ 300 (908)
32289 .. +..+..+++++++.|+.
32290 T Consensus 188 ~~-~~~~~~~~~~~~~~g~~ 206 (275)
32291 T 3D8U_A 188 SH-EEIAIGALFECHRRVLK 206 (275)
32292 T ss_dssp SS-HHHHHHHHHHHHHTTCC
32293 T ss_pred CC-HHHHHHHHHHHHHCCCC
32294 Confidence 64 35566778888877763
32295
32296
32297 No 184
32298 >3D8U_B PurR transcriptional regulator; APC91343.1, PurR, transcriptional regulator, Vibrio; 2.88A {Vibrio parahaemolyticus}
32299 Probab=97.31 E-value=2.7e-07 Score=91.46 Aligned_cols=202 Identities=12% Similarity=0.082 Sum_probs=116.7 Template_Neff=12.400
32300
32301 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
32302 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
32303 ++++||++.|.... .++..+..+++.++++.+ +++.+.++..++ +...+.++++
32304 T Consensus 2 ~~~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~~~ 55 (275)
32305 T 3D8U_B 2 NAYSIALIIPSLFE------------KACAHFLPSFQQALNKAG----------YQLLLGYSDYSI----EQEEKLLSTF 55 (275)
32306 T ss_dssp --CCEEEEESCSSC------------HHHHHHHHHHHHHHHHHT----------CCEEEEECSSCH----HHHHHHHHHH
32307 T ss_pred CcceEEEEeCccCC------------hhHHHHHHHHHHHHHHcC----------CEEEEEeCCCCH----HHHHHHHHHH
32308 Confidence 46889999987532 245667778887777642 233444443332 1223334433
32309
32310
32311 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
32312 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
32313 +. .+++++|+...+... .....+...++|+|..+...+ .++.+.+..+....+
32314 T Consensus 56 ~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~ip~v~~~~~~~-------~~~~~~v~~d~~~~~ 108 (275)
32315 T 3D8U_B 56 LE-------------------SRPAGVVLFGSEHSQ-RTHQLLEASNTPVLEIAELSS-------KASYLNIGVDHFEVG 108 (275)
32316 T ss_dssp HT-------------------TCCSCEEEESSCCCH-HHHHHHHHTTCCEEEESSSCS-------SSSCEEECCCHHHHH
32317 T ss_pred HH-------------------hCCCEEEEeCCCCCH-HHHHHHHhCCCCEEEEcCCCC-------CCCCcEEEeCHHHHH
32318 Confidence 32 478888875544333 344556678999988765432 134566677777777
32319
32320
32321 Q NP_000836.2 204 QAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAVIM 280 (908)
32322 Q Consensus 204 ~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~viv~ 280 (908)
32323 +.+++++.+.+.++++++..+.. .+..+.++|++.+++. ++.+..........+..+....++++++ ..++|+|++
32324 T Consensus 109 ~~~~~~l~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~i~~ 187 (275)
32325 T 3D8U_B 109 KACTRHLIEQGFKNVGFIGARGNHSTLQRQLHGWQSAMIEN-YLTPDHFLTTHEAPSSQLGAEGLAKLLLRDSSLNALVC 187 (275)
32326 T ss_dssp HHHHHHHHHTTCCCEEEEEECTTSHHHHHHHHHHHHHHHHT-TCCCCCEEEESSCCCHHHHHHHHHHHHHHCTTCCEEEE
32327 T ss_pred HHHHHHHHHCCCCcEEEEecCCCchHHHHHHHHHHHHHHHC-CCCcceEEecCCCCchhhHHHHHHHHHhcCCCCCEEEE
32328 Confidence 78888876668889999985443 4556777888877764 3433211111100111223344555542 134788876
32329
32330
32331 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQS 300 (908)
32332 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~~ 300 (908)
32333 .. +..+..+++++++.|+.
32334 T Consensus 188 ~~-~~~~~~~~~~~~~~g~~ 206 (275)
32335 T 3D8U_B 188 SH-EEIAIGALFECHRRVLK 206 (275)
32336 T ss_dssp SS-HHHHHHHHHHHHHHTCC
32337 T ss_pred CC-HHHHHHHHHHHHHCCCC
32338 Confidence 64 35566778888877763
32339
32340
32341 No 185
32342 >1JHZ_B PURINE NUCLEOTIDE SYNTHESIS REPRESSOR; corepressor binding domain, purine repressor; 2.4A {Escherichia coli} SCOP: c.93.1.1
32343 Probab=97.31 E-value=2.7e-07 Score=92.37 Aligned_cols=206 Identities=14% Similarity=0.127 Sum_probs=112.9 Template_Neff=12.100
32344
32345 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
32346 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
32347 ..++..+||++.|..+. .++..+..+++.++++.| +++.+.++..++ +...+.+
32348 T Consensus 3 ~~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~ 56 (289)
32349 T 1JHZ_B 3 KVNHTKSIGLLATSSEA------------AYFAEIIEAVEKNCFQKG----------YTLILGNAWNNL----EKQRAYL 56 (289)
32350 T ss_dssp -----CEEEEEESCSSC------------HHHHHHHHHHHHHHHHTT----------CEEEEEECCSCH----HHHHHHH
32351 T ss_pred ccCCcceEEEEeCCCCC------------hhHHHHHHHHHHHHHHhC----------CeEEEEecCCCH----HHHHHHH
32352 Confidence 34567899999987542 245667778887777643 233444443332 2223334
32353
32354
32355 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILR-LFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
32356 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~-~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
32357 +++.. .++|++|+...+... .....+. ..++|+|..+...+. .++.+.+..++
32358 T Consensus 57 ~~~~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~~ip~v~~~~~~~~------~~~~~~v~~~~ 110 (289)
32359 T 1JHZ_B 57 SMMAQ-------------------KRVDGLLVMCSEYPE-PLLAMLEEYRHIPMVVMDFGEAK------ADFTDAVIDNA 110 (289)
32360 T ss_dssp HHHHH-------------------TTCSCCCEECSCCCH-HHHHHHHHTTTSCCCEEEESSCC------TTSCCEEECCH
32361 T ss_pred HHHHh-------------------cCCCEEEEecCCCCH-HHHHHHHHhCCCCEEEeeCCCcc------ccCceEEEeCh
32362 Confidence 43332 478888875443222 2233333 479999987654321 23445566666
32363
32364
32365 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNAR 276 (908)
32366 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 276 (908)
32367 ...++.+++++.+.+.++++++.. +..++..+.++|++.+++. ++.+..........+..+....++++++. .+++
32368 T Consensus 111 ~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 189 (289)
32369 T 1JHZ_B 111 FEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEA-MIKVPESWIVQGDFEPESGYRAMQQILSQPHRPT 189 (289)
32370 T ss_dssp HHHHHHHHHHHHHTTCCSEEEECCC------CHHHHHHHHHHHHT-TCCCCGGGBCCCCSSHHHHHHHHHHHHSSSSCCS
32371 T ss_pred HHHHHHHHHHHHHCCCCcEEEeeCCCCccChHHHHHHHHHHHHHc-CCCCCHHHeeecCCChHHHHHHHHHHHhCCCCCc
32372 Confidence 677778888886667889999985 3345667778888888765 34433211011001112333445555421 2467
32373
32374
32375 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQS 300 (908)
32376 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32377 +|++.. +..+..+++++++.|+.
32378 T Consensus 190 ~i~~~~-~~~~~~~~~~l~~~g~~ 212 (289)
32379 T 1JHZ_B 190 AVFCGG-DIMAMGALCAADEMGLR 212 (289)
32380 T ss_dssp EEEESC-HHHHHHHHHHHHHHTCC
32381 T ss_pred EEEECC-HHHHHHHHHHHHHCCCC
32382 Confidence 776654 44556778888877763
32383
32384
32385 No 186
32386 >2P9H_A Lactose operon repressor; Lac repressor, allosteric effectors, gene; HET: IPT; 2.0A {Escherichia coli} SCOP: c.93.1.1
32387 Probab=97.30 E-value=2.8e-07 Score=91.05 Aligned_cols=199 Identities=12% Similarity=0.076 Sum_probs=116.1 Template_Neff=12.200
32388
32389 Q NP_000836.2 46 IILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALIE 125 (908)
32390 Q Consensus 46 i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~~ 125 (908)
32391 ++||++.|..+. .++..+..+++.++++.+ +++.+...+. .++ +...+.+++++.
32392 T Consensus 1 ~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~-~~~----~~~~~~~~~l~~ 55 (269)
32393 T 2P9H_A 1 LLIGVATSSLAL------------HAPSQIVAAIKSRADQLG--------ASVVVSMVER-SGV----EACKAAVHNLLA 55 (269)
32394 T ss_dssp CEEEEEESCTTS------------HHHHHHHHHHHHHHHHHT--------CEEEEEECCS-SSH----HHHHHHHHHHHT
32395 T ss_pred CeEEEEeCcccc------------cchHHHHHHHHHHHHHcC--------CcEEEEEccC-CcH----HHHHHHHHHHHh
32396 Confidence 478999887542 255677788888887753 3344333222 111 122233443332
32397
32398
32399 Q NP_000836.2 126 KDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQA 205 (908)
32400 Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 205 (908)
32401 .+++++|+...+.........+...++|+|..+...+ ++++++.+++...++.
32402 T Consensus 56 -------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~--------~~~~~v~~d~~~~~~~ 108 (269)
32403 T 2P9H_A 56 -------------------QRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQ--------TPINSIIFSHEDGTRL 108 (269)
32404 T ss_dssp -------------------TTCSEEEEESCCCHHHHHHHHHHTTTSCEEESSSCTT--------SSSCEEEECHHHHHHH
32405 T ss_pred -------------------CCCCEEEEeCCCCChHHHHHHHHHcCCCEEEeeCCCC--------CCCCEEEECChHHHHH
32406 Confidence 4788888764443322222345678999998765432 2456667777777778
32407
32408
32409 Q NP_000836.2 206 MVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARAVIMFA 282 (908)
32410 Q Consensus 206 ~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~viv~~~ 282 (908)
32411 +++++.+.+.++++++.. ++.++..+.+++++.+++. ++++....... .+..+....+++++.. .++|+|++..
32412 T Consensus 109 ~~~~l~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~i~~~~ 185 (269)
32413 T 2P9H_A 109 GVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRN-QIQPIAEREGD--WSAMSGFQQTMQMLNEGIVPTAMLVAN 185 (269)
32414 T ss_dssp HHHHHHHHTCCCEEEEECCTTSHHHHHHHHHHHHHHHHT-TCCCSEEEECC--SSHHHHHHHHHHHHHTTCCCSEEEESS
32415 T ss_pred HHHHHHHCCCCcEEEEeCCcCCHHHHHHHHHHHHHHHHC-CCCCceeecCC--CchhHHHHHHHHHHhcCCCCCEEEECC
32416 Confidence 888876667889999885 3345667778888888775 35443221111 1112233445555421 2477776664
32417
32418
32419 Q NP_000836.2 283 NEDDIRRILEAAKKLNQS 300 (908)
32420 Q Consensus 283 ~~~~~~~~l~~~~~~g~~ 300 (908)
32421 +..+..+++++++.|..
32422 T Consensus 186 -~~~~~~~~~~l~~~~~~ 202 (269)
32423 T 2P9H_A 186 -DQMALGAMRAITESGLR 202 (269)
32424 T ss_dssp -HHHHHHHHHHHHHTTCC
32425 T ss_pred -HHHHHHHHHHHHHcCCC
32426 Confidence 34466777788777764
32427
32428
32429 No 187
32430 >2PAF_B Lactose operon repressor; Lac repressor, allosteric effectors, gene; HET: NPF; 3.5A {Escherichia coli} SCOP: c.93.1.1
32431 Probab=97.30 E-value=2.8e-07 Score=91.05 Aligned_cols=199 Identities=12% Similarity=0.076 Sum_probs=116.1 Template_Neff=12.200
32432
32433 Q NP_000836.2 46 IILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALIE 125 (908)
32434 Q Consensus 46 i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~~ 125 (908)
32435 ++||++.|..+. .++..+..+++.++++.+ +++.+...+. .++ +...+.+++++.
32436 T Consensus 1 ~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~-~~~----~~~~~~~~~l~~ 55 (269)
32437 T 2PAF_B 1 LLIGVATSSLAL------------HAPSQIVAAIKSRADQLG--------ASVVVSMVER-SGV----EACKAAVHNLLA 55 (269)
32438 T ss_dssp CEEEEEESCTTS------------HHHHHHHHHHHHHHGGGT--------CEEEEEECCS-SSH----HHHHHHHHHHHT
32439 T ss_pred CeEEEEeCcccc------------cchHHHHHHHHHHHHHcC--------CcEEEEEccC-CcH----HHHHHHHHHHHh
32440 Confidence 478999887542 255677788888887753 3344333222 111 122233443332
32441
32442
32443 Q NP_000836.2 126 KDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQA 205 (908)
32444 Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 205 (908)
32445 .+++++|+...+.........+...++|+|..+...+ ++++++.+++...++.
32446 T Consensus 56 -------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~--------~~~~~v~~d~~~~~~~ 108 (269)
32447 T 2PAF_B 56 -------------------QRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQ--------TPINSIIFSHEDGTRL 108 (269)
32448 T ss_dssp -------------------TTCSEEEEESCCCHHHHHHHHHHTCSSCEEESSSCTT--------SCSSEEEECHHHHHHH
32449 T ss_pred -------------------CCCCEEEEeCCCCChHHHHHHHHHcCCCEEEeeCCCC--------CCCCEEEECChHHHHH
32450 Confidence 4788888764443322222345678999998765432 2456667777777778
32451
32452
32453 Q NP_000836.2 206 MVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARAVIMFA 282 (908)
32454 Q Consensus 206 ~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~viv~~~ 282 (908)
32455 +++++.+.+.++++++.. ++.++..+.+++++.+++. ++++....... .+..+....+++++.. .++|+|++..
32456 T Consensus 109 ~~~~l~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~i~~~~ 185 (269)
32457 T 2PAF_B 109 GVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRN-QIQPIAEREGD--WSAMSGFQQTMQMLNEGIVPTAMLVAN 185 (269)
32458 T ss_dssp HHHHHHTTTCCCEEEEECCTTSHHHHHHHHHHHHHHHTT-TCCCSCEEECC--SCHHHHHHTHHHHGGGTCCCSEEEESS
32459 T ss_pred HHHHHHHCCCCcEEEEeCCcCCHHHHHHHHHHHHHHHHC-CCCCceeecCC--CchhHHHHHHHHHHhcCCCCCEEEECC
32460 Confidence 888876667889999885 3345667778888888775 35443221111 1112233445555421 2477776664
32461
32462
32463 Q NP_000836.2 283 NEDDIRRILEAAKKLNQS 300 (908)
32464 Q Consensus 283 ~~~~~~~~l~~~~~~g~~ 300 (908)
32465 +..+..+++++++.|..
32466 T Consensus 186 -~~~~~~~~~~l~~~~~~ 202 (269)
32467 T 2PAF_B 186 -DQMALGAMRAITESGLR 202 (269)
32468 T ss_dssp -HHHHHHHHHHHHHTTCC
32469 T ss_pred -HHHHHHHHHHHHHcCCC
32470 Confidence 34466777788777764
32471
32472
32473 No 188
32474 >3K4H_A putative transcriptional regulator; STRUCTURAL GENOMICS, CRYSTAL STRUCTURE,PROTEIN STRUCTURE; HET: MAL; 2.8A {Bacillus cytotoxicus NVH 391-98}
32475 Probab=97.30 E-value=2.9e-07 Score=92.38 Aligned_cols=210 Identities=10% Similarity=0.048 Sum_probs=120.5 Template_Neff=11.900
32476
32477 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
32478 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
32479 .++.++||++.|.++.... ...++..+..+++.++++.+ +++ .+.|...+. +...+.++
32480 T Consensus 5 ~~~~~~Ig~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g--------~~~--~~~~~~~~~----~~~~~~~~ 63 (292)
32481 T 3K4H_A 5 NQTTKTLGLVMPSSASKAF-------QNPFFPEVIRGISSFAHVEG--------YAL--YMSTGETEE----EIFNGVVK 63 (292)
32482 T ss_dssp --CCCEEEEECSSCHHHHT-------TSTHHHHHHHHHHHHHHHTT--------CEE--EECCCCSHH----HHHHHHHH
32483 T ss_pred cCCCCEEEEEecCchhhhh-------cCCcHHHHHHHHHHHHHHcC--------cEE--EEECCCChH----HHHHHHHH
32484 Confidence 4568999999998641000 01355677788888877642 233 333432221 11222222
32485
32486
32487 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
32488 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
32489 .+.. .+++++|+...+.. ......+...++|+|..+...+. .++++++.++...
32490 T Consensus 64 ~~~~-------------------~~~d~ii~~~~~~~-~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~~ 117 (292)
32491 T 3K4H_A 64 MVQG-------------------RQIGGIILLYSREN-DRIIQYLHEQNFPFVLIGKPYDR------KDEITYVDNDNYT 117 (292)
32492 T ss_dssp HHHT-------------------TCCCEEEESCCBTT-CHHHHHHHHTTCCEEEESCCSSC------TTTSCEEECCHHH
32493 T ss_pred HHHc-------------------CCCCEEEEecccCC-hHHHHHHHHCCCCEEEeCCCCCC------CCCccEEEcCHHH
32494 Confidence 2221 47888887654433 34445566789999987764431 2456777788877
32495
32496
32497 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAV 278 (908)
32498 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vi 278 (908)
32499 .++.+++++.+.+.++++++.. +...+..+.++|++.+++. ++.+........+.+..+....++++++ ..++|+|
32500 T Consensus 118 ~~~~~~~~l~~~g~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 196 (292)
32501 T 3K4H_A 118 AAREVAEYLISLGHKQIAFIGGGSDLLVTRDRLAGMSDALKLA-DIVLPKEYILHFDFSRESGQQAVEELMGLQQPPTAI 196 (292)
32502 T ss_dssp HHHHHHHHHHHTTCCCEEEEESCTTBHHHHHHHHHHHHHHHHT-TCCCCGGGEEECCSSHHHHHHHHHHHHTSSSCCSEE
32503 T ss_pred HHHHHHHHHHHCCCCeEEEEcCCcccHHHHHHHHHHHHHHHHc-CCCCChhheeccCCCHHHHHHHHHHHHhcCCCCCEE
32504 Confidence 8888888887668889999985 3345566778888887764 3444321111100111233344455442 1367787
32505
32506
32507 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
32508 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32509 ++.. +..+..+++++++.|+.
32510 T Consensus 197 ~~~~-~~~a~~~~~~~~~~g~~ 217 (292)
32511 T 3K4H_A 197 MATD-DLIGLGVLSALSKKGFV 217 (292)
32512 T ss_dssp EESS-HHHHHHHHHHHHHTTCC
32513 T ss_pred EECC-hHHHHHHHHHHHHcCCC
32514 Confidence 7664 44566778888877763
32515
32516
32517 No 189
32518 >4RXT_A Sugar ABC transporter; SUGAR TRANSPORTER, ABC-TYPE, ENZYME FUNCTION; HET: ARA; 1.35A {Agrobacterium radiobacter}
32519 Probab=97.30 E-value=3e-07 Score=92.78 Aligned_cols=213 Identities=11% Similarity=0.021 Sum_probs=120.7 Template_Neff=11.800
32520
32521 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
32522 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
32523 .++++||++.|.++. .++.....+++.++++. |+++.+...|+..+. +...+.+++
32524 T Consensus 2 ~~~~~Igvi~~~~~~------------~~~~~~~~g~~~~~~~~--------g~~~~~~~~~~~~~~----~~~~~~~~~ 57 (299)
32525 T 4RXT_A 2 MAEVTIPIIVKDTTS------------FYWQIVLAGARKAGKDL--------GVKVPELGAQAETDV----NGQISILEN 57 (299)
32526 T ss_dssp TTCCBCCEEESCTTS------------HHHHHHHHHHHHHHHHH--------TCBCCEEECSCTTCH----HHHHHHHHH
32527 T ss_pred CCCeEEEEEeccCCC------------hhHHHHHHHHHHHHHHh--------CCEEEEecCCcCCCH----HHHHHHHHH
32528 Confidence 357899999997542 25567778888888775 344555444432222 122333443
32529
32530
32531 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
32532 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
32533 +.. ++++++|+...+.... .....+ ..++|++..+...+. .++.+++.+++..
32534 T Consensus 58 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~-~~~ipvv~~~~~~~~------~~~~~~v~~d~~~ 111 (299)
32535 T 4RXT_A 58 AVA-------------------GKPAAIVISPTEFKALGKPVDEA-AKSVPIIGIDSGADS------KAFKSFLTTDNTQ 111 (299)
32536 T ss_dssp HHH-------------------TCCSCEEECCSSTTTTHHHHHHH-HTTSCEEEESSCCSC------SCCSEEEECCHHH
32537 T ss_pred HHh-------------------CCCCEEEECCCChHhccHHHHHH-HhCCCEEEEccCCCc------ccccEEEecCHHH
32538 Confidence 332 4788887654443321 233334 579999987654321 2445677777777
32539
32540
32541 Q NP_000836.2 202 QAQAMVDIVTA-------LGWNYVSTLAS--EGNYGESGVEAFTQISREIG-GVCIAQSQKIPREPRPGEFEKIIKRLLE 271 (908)
32542 Q Consensus 202 ~~~~~~~~l~~-------~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~l~~ 271 (908)
32543 .++.+++++.+ .+.++++++.. +..++..+.++|++.+++.+ ++++....... .+..+....++++.+
32544 T Consensus 112 ~~~~~~~~l~~~l~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 189 (299)
32545 T 4RXT_A 112 GGRIAADGLAAAIKAMTGKEEGDVVIITNTPGAGSLEQRRTGFLDQVKTKYPGLKVVADKYAD--GQATTGLNIMTDLIT 189 (299)
32546 T ss_dssp HHHHHHHHHHHHHHHHHSSSCEEEEEEESSTTCHHHHHHHHHHHHHHHHHCTTEEEEEEEECC--SCHHHHHHHHHHHHH
32547 T ss_pred HHHHHHHHHHHHHHHhhCCCCceEEEEEcCCCCchHHHHHHHHHHHHHHHCCCcEEeeeecCC--CCHHHHHHHHHHHHH
32548 Confidence 77777777654 36789999985 33456677788888776531 23332211111 111233444555542
32549
32550
32551 Q NP_000836.2 272 -TPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
32552 Q Consensus 272 -~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
32553 ..++++|++.. +..+..+++++++.|...++.+++.
32554 T Consensus 190 ~~~~~~~i~~~~-~~~a~~~~~~l~~~g~~~~i~i~g~ 226 (299)
32555 T 4RXT_A 190 ANPKIVGVFASN-LIMAQGVGQAIAENKLSDKVKVIGF 226 (299)
32556 T ss_dssp HCTTEEEEEECS-HHHHHHHHHHHHHTTCTTTCEEEEE
32557 T ss_pred HCCCccEEEECC-hhhHHHHHHHHHHCCCCCCeEEEEE
32558 Confidence 12456665553 4456678888888776323444443
32559
32560
32561 No 190
32562 >4ZJP_A solute binding protein; Solute binding protein, ENZYME FUNCTION; HET: MSE, RIP, EDO; 1.63A {Actinobacillus succinogenes (strain ATCC 55618 / 130Z)}
32563 Probab=97.29 E-value=3e-07 Score=92.30 Aligned_cols=206 Identities=13% Similarity=0.068 Sum_probs=115.9 Template_Neff=11.800
32564
32565 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSL 117 (908)
32566 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
32567 .....++.++||++.|..+. .++.....+++.++++.| +++.+.|+..++. ...
32568 T Consensus 17 ~~~~~~~~~~Ig~v~~~~~~------------~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----~~~ 70 (292)
32569 T 4ZJP_A 17 NLYFQSMQETIALTVSTLDN------------PFFVSLKDGAQKKATELG----------YKLVVLDSQNDPS----KEL 70 (292)
32570 T ss_dssp ------CCCEEEEEESCSSS------------HHHHHHHHHHHHHHHHHT----------CEEEEEECTTCHH----HHH
32571 T ss_pred ccccccCCcEEEEEeCCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEEcCCCCHH----HHH
32572 Confidence 34566789999999997542 255677788888887753 3344455443322 222
32573
32574
32575 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVIG-AAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVV 196 (908)
32576 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg-~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~ 196 (908)
32577 +.++++.. ++++++|. +..+.........+...++|+|..+...+. .++++++.
32578 T Consensus 71 ~~~~~l~~-------------------~~~~~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~------~~~~~~v~ 125 (292)
32579 T 4ZJP_A 71 SNVEDLTV-------------------RGAKVLLINPTDSAAVSNAVAIANRNKIPVITLDRGAAK------GEVVSHIA 125 (292)
32580 T ss_dssp HHHHHHHH-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCSS------SCCSEEEE
32581 T ss_pred HHHHHHHh-------------------CCCCEEEEcCCChhHHHHHHHHHHHCCCCEEEECCCCCC------CCceEEEE
32582 Confidence 33333332 35665554 333332224445566789999987654321 34677888
32583
32584
32585 Q NP_000836.2 197 PPDSYQAQAMVDIVTAL---GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE 271 (908)
32586 Q Consensus 197 ~~~~~~~~~~~~~l~~~---~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~ 271 (908)
32587 +++...++.+++++.+. +.+ ++++.. ++.++..+.+++++.+++. ++.+....... .+..+....++++++
32588 T Consensus 126 ~d~~~~~~~~~~~l~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~ 201 (292)
32589 T 4ZJP_A 126 SDNVAGGKMAGDFIAQKLGDGAK-VIQLEGLAGTSAARERGEGFKQAIEAH-KFDVLASQPAD--FDRTKGLNVTENLLA 201 (292)
32590 T ss_dssp ECHHHHHHHHHHHHHHHHCTTCE-EEEEECCTTSHHHHHHHHHHHHHHHHH-TCEEEEEEECT--TCHHHHHHHHHHHHH
32591 T ss_pred cChHHHHHHHHHHHHHHhCCCcE-EEEEECCCCCHHHHHHHHHHHHHHHhc-CCeEEEeecCC--CCHHHHHHHHHHHHH
32592 Confidence 88888888888887543 344 555543 3456677788888888775 35443221111 112234445555542
32593
32594
32595 Q NP_000836.2 272 T-PNARAVIMFANEDDIRRILEAAKKLNQ 299 (908)
32596 Q Consensus 272 ~-~~~~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
32597 . .++++|++.. +..+..+++++++.|.
32598 T Consensus 202 ~~~~~~~i~~~~-~~~a~~~~~~~~~~g~ 229 (292)
32599 T 4ZJP_A 202 SKGSVQAIFAQN-DEMALGALRAISAAGK 229 (292)
32600 T ss_dssp HSTTCCEEEESS-HHHHHHHHHHHHHHTC
32601 T ss_pred hcCCCCEEEECC-hHHHHHHHHHHHHCCC
32602 Confidence 1 2456665543 4456678888887775
32603
32604
32605 No 191
32606 >2VK2_A ABC TRANSPORTER PERIPLASMIC-BINDING PROTEIN YTFQ; TRANSPORT PROTEIN, ABC TRANSPORT, GALACTOFURANOSE; HET: GZL; 1.2A {ESCHERICHIA COLI}
32607 Probab=97.28 E-value=3.2e-07 Score=92.93 Aligned_cols=205 Identities=11% Similarity=0.090 Sum_probs=118.5 Template_Neff=11.600
32608
32609 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
32610 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
32611 +++||++.|.+.. .++.....+++.++++.| +++.+.|...++ +...+.+++++
32612 T Consensus 2 ~~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~~l~ 55 (306)
32613 T 2VK2_A 2 PLTVGFSQVGSES------------GWRAAETNVAKSEAEKRG----------ITLKIADGQQKQ----ENQIKAVRSFV 55 (306)
32614 T ss_dssp CCEEEEEECCCCS------------HHHHHHHHHHHHHHHHHT----------CEEEEEECTTCH----HHHHHHHHHHH
32615 T ss_pred CcEEEEEecCCCC------------hHHHHHHHHHHHHHHHhC----------CEEEEEcCCCCH----HHHHHHHHHHH
32616 Confidence 5789999997632 245566677777777653 344455544332 22333444433
32617
32618
32619 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
32620 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
32621 . .+++++|....... .......+...++|+|..+...+.. ...++++++.+++...+
32622 T Consensus 56 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~---~~~~~~~~v~~d~~~~~ 113 (306)
32623 T 2VK2_A 56 A-------------------QGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVK---DKSLYMTTVTADNILEG 113 (306)
32624 T ss_dssp H-------------------HTCSEEEECCSSSSSCHHHHHHHHHTTCCEEEESSCCCCS---CGGGSSEEEECCHHHHH
32625 T ss_pred H-------------------cCCCEEEEcCCCccChHHHHHHHHHCCCCEEEECCCCCCC---CccceEEEEecChHHHH
32626 Confidence 2 46776665433322 2244455677899999877644321 01245677778887778
32627
32628
32629 Q NP_000836.2 204 QAMVDIVTALGWN---YVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET----PN 274 (908)
32630 Q Consensus 204 ~~~~~~l~~~~~~---~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~----~~ 274 (908)
32631 +.+++++.+.+.+ +++++.. ++.++..+.++|++.+++.+.+++....... .+..+....+++++.. .+
32632 T Consensus 114 ~~~~~~l~~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 191 (306)
32633 T 2VK2_A 114 KLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAPNIKIIRSQSGD--FTRSKGKEVMESFIKAENNGKN 191 (306)
32634 T ss_dssp HHHHHHHHHHHTTSCEEEEEEECSTTCHHHHHHHHHHHHHTTTCTTEEEEEEEECT--TCHHHHHHHHHHHHHHTTTTTT
32635 T ss_pred HHHHHHHHHHhCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHhCCCeEEEeeecCC--CCHHHHHHHHHHHHHHhcCCCC
32636 Confidence 8888887554333 7888875 4456667788888887764213432211111 1112333445555421 35
32637
32638
32639 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
32640 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32641 +++|++.. +..+..+++++++.|+.
32642 T Consensus 192 ~d~i~~~~-~~~a~~~~~~l~~~g~~ 216 (306)
32643 T 2VK2_A 192 ICMVYAHN-DDMVIGAIQAIKEAGLK 216 (306)
32644 T ss_dssp CCEEEESS-HHHHHHHHHHHHHTTCC
32645 T ss_pred CCEEEECC-HHHHHHHHHHHHHCCCC
32646 Confidence 77887664 44567788888887764
32647
32648
32649 No 192
32650 >1JFT_A PURINE NUCLEOTIDE SYNTHESIS REPRESSOR/DNA Complex; TRANSCRIPTION REGULATION, DNA-BINDING, REPRESSOR, PURINE; HET: HPA; 2.5A {Escherichia coli} SCOP: c.93.1.1, a.35.1.5
32651 Probab=97.28 E-value=3.2e-07 Score=94.53 Aligned_cols=206 Identities=14% Similarity=0.133 Sum_probs=119.1 Template_Neff=11.700
32652
32653 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
32654 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
32655 ...+.++||++.|..+. .++.....+++.++++.| +++.+.++..+. +...+.+
32656 T Consensus 54 ~~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~----~~~~~~~ 107 (340)
32657 T 1JFT_A 54 KVNHTKSIGLLATSSEA------------AYFAEIIEAVEKNCFQKG----------YTLILGNAWNNL----EKQRAYL 107 (340)
32658 T ss_dssp HHTCCCEEEEEESCSCS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHH
32659 T ss_pred ccCCCCEEEEEeCCCCc------------chHHHHHHHHHHHHHHcC----------CEEEEEeCCCCH----HHHHHHH
32660 Confidence 34578899999987542 255677788888877653 233444443332 2223333
32661
32662
32663 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILR-LFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
32664 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~-~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
32665 +++.. .++|++|+....... .....+. ..++|+|..+...+. .++.+.+..++
32666 T Consensus 108 ~~~~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~~~ 161 (340)
32667 T 1JFT_A 108 SMMAQ-------------------KRVDGLLVMCSEYPE-PLLAMLEEYRHIPMVVMDAGEAK------ADFTDAVIDNA 161 (340)
32668 T ss_dssp HHHHH-------------------TTCSEEEECCSCCCH-HHHHHHHTTTTSCEEESSCSSCC------CSSSEEEECCH
32669 T ss_pred HHHHh-------------------cCCCEEEEeCCCCCH-HHHHHHHHhcCCCEEEEcCCccC------CCCCcEEEeCH
32670 Confidence 43332 478888875443222 2233333 479999987764431 23445666666
32671
32672
32673 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNAR 276 (908)
32674 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~ 276 (908)
32675 ...++.+++++.+.++++++++.. +..++..+.++|++.+++. ++.+........+.+..+....++++++ ..++|
32676 T Consensus 162 ~~~~~~~~~~l~~~g~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d 240 (340)
32677 T 1JFT_A 162 FEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEA-MIKVPESWIVQGDFEPESGYRAMQQILSQPHRPT 240 (340)
32678 T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCTTSCCCCCHHHHHHHHHHHH-TCCCCGGGBCCCCSSHHHHHHHHHHHHTSSSCCS
32679 T ss_pred HHHHHHHHHHHHHCCCCeEEEEeCCccccchHHHHHHHHHHHHHC-CCCCCHHHeeecCCChHHHHHHHHHHHcCCCCCC
32680 Confidence 667778888876668889999985 3345667788888888765 3444321111100111233344555542 12477
32681
32682
32683 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQS 300 (908)
32684 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32685 +|++.. +..+..+++++++.|+.
32686 T Consensus 241 ~i~~~~-~~~~~~~~~~l~~~g~~ 263 (340)
32687 T 1JFT_A 241 AVFCGG-DIMAMGALCAADEMGLR 263 (340)
32688 T ss_dssp EEEESS-HHHHHHHHHHHHHTTCC
32689 T ss_pred EEEECC-HHHHHHHHHHHHHcCCC
32690 Confidence 777664 34456777788777763
32691
32692
32693 No 193
32694 >3BRS_B Periplasmic binding protein/LacI transcriptional regulator; STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE; 2.0A {Clostridium phytofermentans}
32695 Probab=97.28 E-value=3.3e-07 Score=91.85 Aligned_cols=215 Identities=11% Similarity=-0.043 Sum_probs=121.6 Template_Neff=11.800
32696
32697 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
32698 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
32699 .++++||++.+.++.. ..++.....+++.++++.+ +++.+...|...+. +...+.+++
32700 T Consensus 3 ~~~~~i~~~~~~~g~~----------~~~~~~~~~g~~~a~~~~g--------~~~~~~~~~~~~~~----~~~~~~~~~ 60 (289)
32701 T 3BRS_B 3 LKQYYMICIPKVLDDS----------SDFWSVLVEGAQMAAKEYE--------IKLEFMAPEKEEDY----LVQNELIEE 60 (289)
32702 T ss_dssp --CCEEEEECSCCCSS----------CHHHHHHHHHHHHHHHHHT--------CEEEECCCSSTTCH----HHHHHHHHH
32703 T ss_pred CcceEEEEeecCCCCC----------ChHHHHHHHHHHHHHHHhC--------CEEEEECCCCCCCH----HHHHHHHHH
32704 Confidence 4578899988875432 1355677888888888763 44555544432222 122333444
32705
32706
32707 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
32708 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
32709 ++. .+++++|+...+.. .......+...++|+|......+. .++.+++.++...
32710 T Consensus 61 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~~ 115 (289)
32711 T 3BRS_B 61 AIK-------------------RKPDVILLAAADYEKTYDAAKEIKDAGIKLIVIDSGMKQ------DIADITVATDNIQ 115 (289)
32712 T ss_dssp HHH-------------------TCCSEEEECCSCTTTTHHHHTTSGGGTCEEEEESCCCSS------CCCSEEEECCHHH
32713 T ss_pred HHH-------------------hCCCEEEEcCCChHhhHHHHHHHHHCCCEEEEECCCCCc------ccccEEEEcCHHH
32714 Confidence 332 47887776544332 224445566789999987654321 2456677777777
32715
32716
32717 Q NP_000836.2 202 QAQAMVDIVTALG--WNYVSTLASE--GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNAR 276 (908)
32718 Q Consensus 202 ~~~~~~~~l~~~~--~~~v~ii~~~--~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~ 276 (908)
32719 .++.+++++.+.+ .++++++... ..++..+.+++++.+++. ++.+....... .+..+....++++++ ..+++
32720 T Consensus 116 ~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 192 (289)
32721 T 3BRS_B 116 AGIRIGAVTKNLVRKSGKIGVISFVKNSKTAMDREEGLKIGLSDD-SNKIEAIYYCD--SNYDKAYDGTVELLTKYPDIS 192 (289)
32722 T ss_dssp HHHHHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHHHGGG-GGGEEEEEECT--TCHHHHHHHHHHHHHHCTTEE
32723 T ss_pred HHHHHHHHHHHHhcCCceEEEEEccCCChHHHHHHHHHHHHHhcC-CCcEEEEEecC--CCHHHHHHHHHHHHHHCCCce
32724 Confidence 7777877775544 6789988733 335666778888887764 34443211111 111223334455542 12467
32725
32726
32727 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
32728 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
32729 +|++.. +..+..+++++++.|...++.+++.
32730 T Consensus 193 ~i~~~~-~~~a~~~~~~~~~~g~~~~~~i~~~ 223 (289)
32731 T 3BRS_B 193 VMVGLN-QYSATGAARAIKDMSLEAKVKLVCI 223 (289)
32732 T ss_dssp EEEESS-HHHHHHHHHHHHHTTCTTTCEEEEE
32733 T ss_pred EEEECC-hhhHHHHHHHHHHCCCcCCeEEEEE
32734 Confidence 776553 4445667777777776323444443
32735
32736
32737 No 194
32738 >4RK4_A Transcriptional regulator, LacI family; sugar binding, transcription regulation, Enzyme; HET: GLC; 1.32A {Lactobacillus casei ATCC 334}
32739 Probab=97.27 E-value=3.4e-07 Score=91.30 Aligned_cols=205 Identities=15% Similarity=0.126 Sum_probs=115.7 Template_Neff=12.200
32740
32741 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
32742 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
32743 ..++.++||+++|..+. .++..+..+++.++++.+ +++.+.+...+. +...+.+
32744 T Consensus 5 ~~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~ 58 (283)
32745 T 4RK4_A 5 RAQATGNIGVLVSRVTN------------PFFAGLFDAIERELHAHG----------YQVMITQTYDDP----EAEERFL 58 (283)
32746 T ss_dssp ----CCEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHH
32747 T ss_pred ccCCCCeEEEEEccCCC------------hhHHHHHHHHHHHHHHCC----------CEEEEEcCCCCH----HHHHHHH
32748 Confidence 34568999999997542 255667778877776542 334444443332 2233344
32749
32750
32751 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
32752 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
32753 +++.. .++|++|+...+... .....++..++|++..+...+. +..+.+..++.
32754 T Consensus 59 ~~l~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~~pvv~~~~~~~~-------~~~~~v~~d~~ 111 (283)
32755 T 4RK4_A 59 KQLKS-------------------RELDGVILASVEAPD-RVMAVAKAFPGRVVVVNADVQI-------PGATSLVLPHY 111 (283)
32756 T ss_dssp HHHHT-------------------TSSSEEEESCCSCHH-HHHHHHHHSTTSEEEESSSCCC-------TTSEEECCCHH
32757 T ss_pred HHHHh-------------------CCCCEEEEecCCCCH-HHHHHHHhCCCcEEEEcCCCCC-------CCCcEEEeChH
32758 Confidence 44332 478888875544333 3334556678998887654321 23455666666
32759
32760
32761 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGN----YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE---TP 273 (908)
32762 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~----~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~---~~ 273 (908)
32763 ..++.+++++.+.+.++++++..+.. .+..+.++|++.+++. ++.+..........+..+....+++++. ..
32764 T Consensus 112 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (283)
32765 T 4RK4_A 112 QATRDALDYLFNQGHRRFAYVSGGTISGAHHGQSRTQAFLDFMQAH-QLLVAQDLLFGQIHTAKEGQAVGKQLASLAPNV 190 (283)
32766 T ss_dssp HHHHHHHHHHHHTTCCSEEEECSSCTTSSCTTHHHHHHHHHHHHHT-TCCCCGGGEECSCCSHHHHHHHHHHHHTSCTTT
32767 T ss_pred HHHHHHHHHHHHCCCCeEEEEeCCCCCCCcchHHHHHHHHHHHHHC-CCccchhHccCCCCChhHHHHHHHHHHHhCccC
32768 Confidence 67777888877668889999885432 4556777888877764 3433221111100011122333344431 13
32769
32770
32771 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
32772 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32773 ++|+|++.. +..+..+++++++.|+.
32774 T Consensus 191 ~~~~i~~~~-~~~a~~~~~al~~~g~~ 216 (283)
32775 T 4RK4_A 191 RPDAVFTNS-DEVAVGVIDSLLAADVK 216 (283)
32776 T ss_dssp SCSEEECSC-HHHHHHHHHHHHHTTCC
32777 T ss_pred CCCEEEECC-HHHHHHHHHHHHHCCCC
32778 Confidence 678887664 44566788888887764
32779
32780
32781 No 195
32782 >4RK5_A Transcriptional regulator, LacI family; sugar binding, transcription regulation, Enzyme; HET: SUC; 1.35A {Lactobacillus casei ATCC 334}
32783 Probab=97.27 E-value=3.4e-07 Score=91.30 Aligned_cols=205 Identities=15% Similarity=0.126 Sum_probs=115.7 Template_Neff=12.200
32784
32785 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
32786 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
32787 ..++.++||+++|..+. .++..+..+++.++++.+ +++.+.+...+. +...+.+
32788 T Consensus 5 ~~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~ 58 (283)
32789 T 4RK5_A 5 RAQATGNIGVLVSRVTN------------PFFAGLFDAIERELHAHG----------YQVMITQTYDDP----EAEERFL 58 (283)
32790 T ss_dssp ----CCEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHH
32791 T ss_pred ccCCCCeEEEEEccCCC------------hhHHHHHHHHHHHHHHCC----------CEEEEEcCCCCH----HHHHHHH
32792 Confidence 34568999999997542 255667778877776542 334444443332 2233344
32793
32794
32795 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
32796 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
32797 +++.. .++|++|+...+... .....++..++|++..+...+. +..+.+..++.
32798 T Consensus 59 ~~l~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~~pvv~~~~~~~~-------~~~~~v~~d~~ 111 (283)
32799 T 4RK5_A 59 KQLKS-------------------RELDGVILASVEAPD-RVMAVAKAFPGRVVVVNADVQI-------PGATSLVLPHY 111 (283)
32800 T ss_dssp HHHHT-------------------TSCSEEEESSCSCHH-HHHHHHHHSTTSEEEESSSCCC-------TTSEEECCCHH
32801 T ss_pred HHHHh-------------------CCCCEEEEecCCCCH-HHHHHHHhCCCcEEEEcCCCCC-------CCCcEEEeChH
32802 Confidence 44332 478888875544333 3334556678998887654321 23455666666
32803
32804
32805 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGN----YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE---TP 273 (908)
32806 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~----~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~---~~ 273 (908)
32807 ..++.+++++.+.+.++++++..+.. .+..+.++|++.+++. ++.+..........+..+....+++++. ..
32808 T Consensus 112 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (283)
32809 T 4RK5_A 112 QATRDALDYLFNQGHRRFAYVSGGTISGAHHGQSRTQAFLDFMQAH-QLLVAQDLLFGQIHTAKEGQAVGKQLASLAPNV 190 (283)
32810 T ss_dssp HHHHHHHHHHHHTTCCSEEEECSSCTTSSCTTHHHHHHHHHHHHHT-TCCCCGGGEECSCCSHHHHHHHHHHHHTSCTTT
32811 T ss_pred HHHHHHHHHHHHCCCCeEEEEeCCCCCCCcchHHHHHHHHHHHHHC-CCccchhHccCCCCChhHHHHHHHHHHHhCccC
32812 Confidence 67777888877668889999885432 4556777888877764 3433221111100011122333344431 13
32813
32814
32815 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
32816 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32817 ++|+|++.. +..+..+++++++.|+.
32818 T Consensus 191 ~~~~i~~~~-~~~a~~~~~al~~~g~~ 216 (283)
32819 T 4RK5_A 191 RPDAVFTNS-DEVAVGVIDSLLAADVK 216 (283)
32820 T ss_dssp SCSEEECSC-HHHHHHHHHHHHHTTCC
32821 T ss_pred CCCEEEECC-HHHHHHHHHHHHHCCCC
32822 Confidence 678887664 44566788888887764
32823
32824
32825 No 196
32826 >2QU7_B Putative transcriptional regulator; STRUCTURAL GENOMICS, TRANSCRIPTION, PSI-2, Protein; 2.3A {Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305}
32827 Probab=97.26 E-value=3.6e-07 Score=91.52 Aligned_cols=200 Identities=12% Similarity=0.073 Sum_probs=119.6 Template_Neff=11.800
32828
32829 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
32830 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
32831 .++.++||++.|... .++.....+++.++++.| +++.+.++..++. ...+.++
32832 T Consensus 5 ~~~~~~I~~~~~~~~-------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~~----~~~~~~~ 57 (288)
32833 T 2QU7_B 5 TGRSNIIAFIVPDQN-------------PFFTEVLTEISHECQKHH----------LHVAVASSEENED----KQQDLIE 57 (288)
32834 T ss_dssp --CEEEEEEEESSCC-------------HHHHHHHHHHHHHHGGGT----------CEEEEEECTTCHH----HHHHHHH
32835 T ss_pred CCCCCEEEEEecCCC-------------hHHHHHHHHHHHHHHHCC----------CEEEEEeCCCCHH----HHHHHHH
32836 Confidence 456889999999742 245677788888877653 2334444433321 2223344
32837
32838
32839 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
32840 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
32841 +++. ++++++|+...+.... ..+...++|+|..+...+ .++.+++..++..
32842 T Consensus 58 ~l~~-------------------~~~d~ii~~~~~~~~~---~~~~~~~ip~v~~~~~~~-------~~~~~~v~~d~~~ 108 (288)
32843 T 2QU7_B 58 TFVS-------------------QNVSAIILVPVKSKFQ---MKREWLKIPIMTLDRELE-------STSLPSITVDNEE 108 (288)
32844 T ss_dssp HHHH-------------------TTEEEEEECCSSSSCC---CCGGGTTSCEEEESSCCT-------TCCCCEEEECHHH
32845 T ss_pred HHHH-------------------CCCCEEEEecCCcchh---hhHHhcCCCEEEeCCCCC-------CCCCCEEEeChHH
32846 Confidence 3332 4788888765443322 234677999988765432 1345677777777
32847
32848
32849 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPRE------PRPGEFEKIIKRLLETP 273 (908)
32850 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~------~~~~~~~~~~~~l~~~~ 273 (908)
32851 .++.+++++.+.+.++++++..+. .++..+.+++++.+++. ++.+.....+... .+..+....+++++. .
32852 T Consensus 109 ~~~~~~~~l~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 186 (288)
32853 T 2QU7_B 109 AAYIATKRVLESTCKEVGLLLANPNISTTIGRKNGYNKAISEF-DLNVNPSLIHYSDQQLGTNAQIYSGYEATKTLLS-K 186 (288)
32854 T ss_dssp HHHHHHHHHHTTTCCSEEEEECCTTSHHHHHHHHHHHHHHHHT-TCCCCGGGEEECCSSCSHHHHHHHHHHHHHHHHH-T
32855 T ss_pred HHHHHHHHHHHcCCCcEEEEecCCCCcchHHHHHHHHHHHHHC-CCCCCcccEEeecCCCCCchhHHHHHHHHHHHHh-c
32856 Confidence 788888888777888999998543 35667788888888765 3433211111000 011223344555553 4
32857
32858
32859 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
32860 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32861 ++|+|++.. +..+..+++++++.|+.
32862 T Consensus 187 ~~d~i~~~~-~~~a~~~~~~l~~~g~~ 212 (288)
32863 T 2QU7_B 187 GIKGIVATN-HLLLLGALQAIKESEKE 212 (288)
32864 T ss_dssp TCCEEEECS-HHHHHHHHHHHHHSSCC
32865 T ss_pred CCCEEEEcC-cHHHHHHHHHHHHcCCC
32866 Confidence 788887764 44567788888877763
32867
32868
32869 No 197
32870 >4IRX_B Sugar ABC transporter, periplasmic sugar-binding; ABC transporter, periplasmic binding protein; HET: INS, MSE; 1.451A {Caulobacter crescentus}
32871 Probab=97.26 E-value=3.7e-07 Score=91.76 Aligned_cols=208 Identities=13% Similarity=0.057 Sum_probs=119.3 Template_Neff=12.100
32872
32873 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
32874 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
32875 ..++.++||++.|..+. .++.....+++.++++.+ +++.+.|+..++. ...+.+
32876 T Consensus 4 ~~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~l~~~~~~~~~~----~~~~~~ 57 (296)
32877 T 4IRX_B 4 PRGSHMEVVVSFNDLSQ------------PFFVAMRRELEDEAAKLG----------VKVQVLDAQNNSS----KQISDL 57 (296)
32878 T ss_dssp CCCSSCEEEEEESCTTS------------HHHHHHHHHHHHHHHHHT----------CEEEEEECTTCHH----HHHHHH
32879 T ss_pred CCCCCcEEEEEeCCCCC------------HHHHHHHHHHHHHHHHcC----------CEEEEEeCCCCHH----HHHHHH
32880 Confidence 45578999999986532 255677788888887753 3344555543322 223334
32881
32882
32883 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIG-AAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
32884 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg-~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
32885 ++++. +++++++. +..+.........+...++|+|..+...+. ..++++++.+++
32886 T Consensus 58 ~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~~v~~d~ 113 (296)
32887 T 4IRX_B 58 QAAAV-------------------QGAKVVIVAPTDSKALAGAADDLVEQGVAVISVDRNIAG-----GKTAVPHVGADN 113 (296)
32888 T ss_dssp HHHHH-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCEEEEESSCCCS-----SSSCCCEEEECH
32889 T ss_pred HHHHH-------------------CCCCEEEEecCChhhHHHHHHHHHHCCCEEEEEcCCCCC-----CCceeeEEecCh
32890 Confidence 43332 46776654 333332224445566789999987764331 134567777887
32891
32892
32893 Q NP_000836.2 200 SYQAQAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE---T 272 (908)
32894 Q Consensus 200 ~~~~~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~---~ 272 (908)
32895 ...++.+++++.+. +.++++++.. ++.++..+.+++++.+++. +..+..........+..+....+++++. .
32896 T Consensus 114 ~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 192 (296)
32897 T 4IRX_B 114 VAGGRAMADWVVKTYPAGARVVVITNDPGSSSSIERVKGVHDGLAAG-GPAFKIVTEQTANSKRDQALTVTQNILTSMRD 192 (296)
32898 T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEESCTTSHHHHHHHHHHHHHHHHH-CTTEEEEEEEECTTCHHHHHHHHHHHHHHTTT
32899 T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEcCCCCchHHHHHHHHHHHHHcc-CCCcEEEeeecCCCCHHHHHHHHHHHHHhCCC
32900 Confidence 77788888887654 5678998875 3345666777888877764 2332211111000111122233333331 1
32901
32902
32903 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
32904 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32905 .++++|++.. +..+..+++++++.|+.
32906 T Consensus 193 ~~~~~i~~~~-~~~a~~~~~~l~~~g~~ 219 (296)
32907 T 4IRX_B 193 TPPDVILCLN-DDMAMGALEAVRAAGLD 219 (296)
32908 T ss_dssp SCCSEEEESS-HHHHHHHHHHHHHTTCC
32909 T ss_pred CCCCEEEEcC-ChhHHHHHHHHHHCCCC
32910 Confidence 3577776664 34466778888877763
32911
32912
32913 No 198
32914 >4RY9_A Periplasmic binding protein/LacI transcriptional regulator; SUGAR TRANSPORTER, ENZYME FUNCTION INITIATIVE; HET: GOL, TLZ; 1.4A {Verminephrobacter eiseniae EF01-2}
32915 Probab=97.25 E-value=3.9e-07 Score=91.91 Aligned_cols=205 Identities=13% Similarity=0.041 Sum_probs=116.9 Template_Neff=12.100
32916
32917 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
32918 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
32919 .++.++||++.|..+. .++..+..+++.++++.+ +++.+.++..++. ...+.++
32920 T Consensus 4 ~~~~~~Ig~v~~~~~~------------~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~ 57 (302)
32921 T 4RY9_A 4 QTGAFKIGVSMKTLSA------------PYFAAQMEAAKARGKELG----------YEVLATDAQGKLQ----KQISDVE 57 (302)
32922 T ss_dssp --CCCEEEEEESCCCS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCHH----HHHHHHH
32923 T ss_pred cCCCeEEEEEECCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEEcCCCCHH----HHHHHHH
32924 Confidence 3567899999987542 245567777777776632 3444555443321 2223334
32925
32926
32927 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
32928 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
32929 +++. .+++++|+...+.... .....+...++|+|..+...+. ..++++++.+++.
32930 T Consensus 58 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~~v~~~~~ 113 (302)
32931 T 4RY9_A 58 DLVT-------------------RGVKLLIINPADSEGLVNAVNNASANGVKVVVIDSTLNP-----RANFVTQVQSSNS 113 (302)
32932 T ss_dssp HHHH-------------------TTEEEEEEECSCTTTTHHHHHHHHHTTCEEEEESSCCCT-----TSCCSEEEECCHH
32933 T ss_pred HHHH-------------------CCCCEEEEecCCcccHHHHHHHHHHCCCEEEEECCCCCC-----cccceEEEecChh
32934 Confidence 3332 4788777654443322 3445566789999987754331 1345667777777
32935
32936
32937 Q NP_000836.2 201 YQAQAMVDIVTA-L--GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVC--------IAQSQKIPREPRPGEFEKIIK 267 (908)
32938 Q Consensus 201 ~~~~~~~~~l~~-~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~--------v~~~~~~~~~~~~~~~~~~~~ 267 (908)
32939 ..+..+++++.+ . +.++++++.. ++.++..+.+++++.+++. ++. +....... .+..+....++
32940 T Consensus 114 ~~~~~~~~~l~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 190 (302)
32941 T 4RY9_A 114 INGALVGHWVIEEVGNKSLKIALLSGEKGNPVGQERRLGVLSGIIEA-QLRKFGKADLTVVGQGWGH--WNDEGGLKAME 190 (302)
32942 T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEECCTTCHHHHHHHHHHHHHHHHH-HHHHHSCCCCEEEEEEECT--TSHHHHHHHHH
32943 T ss_pred HhHHHHHHHHHHHhCCCccEEEEEEcCCCChHHHHHHHHHHHHHHHH-HHHHhCCCCEEEEeeeecC--CCHHHHHHHHH
32944 Confidence 777788887754 2 3578999985 3445666777788777664 232 21111111 11123444455
32945
32946
32947 Q NP_000836.2 268 RLLET-PNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
32948 Q Consensus 268 ~l~~~-~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
32949 +++.. .++++|++.. +..+..+++++++.|+.
32950 T Consensus 191 ~~~~~~~~~~~i~~~~-~~~a~~~~~~~~~~g~~ 223 (302)
32951 T 4RY9_A 191 DLLVANKDINMVLGEN-DSMVLGARRAIESAGRT 223 (302)
32952 T ss_dssp HHHHHCSCCCEEEESS-HHHHHHHHHHHHHHTCC
32953 T ss_pred HHHHhCCCCCEEEeCC-hHHHHHHHHHHHHcCCC
32954 Confidence 55421 2466666553 44566778888877764
32955
32956
32957 No 199
32958 >3G1W_A Sugar ABC transporter; Sugar ABC transporter, Sugar-binding protein; 2.02A {Bacillus halodurans C-125}
32959 Probab=97.24 E-value=4e-07 Score=92.08 Aligned_cols=213 Identities=14% Similarity=0.059 Sum_probs=117.4 Template_Neff=11.700
32960
32961 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILD-TCSRDTYALEQSLTFVQ 121 (908)
32962 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d-~~~~~~~a~~~~~~~~~ 121 (908)
32963 .++++||++.|.... .++.....+++.++++.+ + ++.+.+ +..++ +...+.++
32964 T Consensus 2 ~~~~~Igvl~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~~----~~~~~~~~ 55 (305)
32965 T 3G1W_A 2 SLNETYMMITFQSGM------------DYWKRCLKGFEDAAQALN--------V--TVEYRGAAQYDI----QEQITVLE 55 (305)
32966 T ss_dssp ---CEEEEEESSTTS------------THHHHHHHHHHHHHHHHT--------C--EEEEEECSSSCH----HHHHHHHH
32967 T ss_pred CCCeEEEEEecCCCC------------hHHHHHHHHHHHHHHHcC--------C--EEEEecccCCCH----HHHHHHHH
32968 Confidence 357899999997632 245567778887777642 3 333444 32222 12223333
32969
32970
32971 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
32972 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
32973 +++. ++++++|+...+... ......+...++|+|..+...+. .++++++.++..
32974 T Consensus 56 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~ 110 (305)
32975 T 3G1W_A 56 QAIA-------------------KNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSGAPD------SHAHSFLGTNNY 110 (305)
32976 T ss_dssp HHHH-------------------HCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCTT------SCCSCEEECCHH
32977 T ss_pred HHHH-------------------cCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCCCC------ccccEEEeCCHH
32978 Confidence 3332 467877764433322 23445566779999987654321 245667777777
32979
32980
32981 Q NP_000836.2 201 YQAQAMVDIVTAL--GWNYVSTLASEG-NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNAR 276 (908)
32982 Q Consensus 201 ~~~~~~~~~l~~~--~~~~v~ii~~~~-~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 276 (908)
32983 ..+..+++++.+. +.++++++.... .....+.+++++.+++. +..+..........+..+....++++++. .++|
32984 T Consensus 111 ~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 189 (305)
32985 T 3G1W_A 111 NAGMNAAYKMAELLDGEGEVAVITLPNQLNHQERTTGFKETLEAE-FPAIEVIAVEDGRGDSLHSRRVAHQLLEDYPNLA 189 (305)
32986 T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECTTCHHHHHHHHHHHHHHHHH-CTTEEEEEEEECTTCHHHHHHHHHHHHHHCTTEE
32987 T ss_pred HHHHHHHHHHHHHcCCCcEEEEEECCCcccHHHHHHHHHHHHHHH-CCCeEEEEEecCCCChHHHHHHHHHHHHHCCCcc
32988 Confidence 7777888887655 778999998532 45566777888877654 23222111111001112334445555421 2477
32989
32990
32991 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
32992 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
32993 +|++.. +..+..+++++++.+...++.+++.
32994 T Consensus 190 ~i~~~~-~~~a~~~~~~l~~~~~~~~v~ii~~ 220 (305)
32995 T 3G1W_A 190 GIFATE-ANGGVGVGDAVRLESRAGEIQIISF 220 (305)
32996 T ss_dssp EEEESS-HHHHHHHHHHHHHTTCTTTSEEEEE
32997 T ss_pred EEEEec-CCcchHHHHHHHHccCCCCEEEEEE
32998 Confidence 787664 3455667777777664323444443
32999
33000
33001 No 200
33002 >3G1W_B Sugar ABC transporter; Sugar ABC transporter, Sugar-binding protein; HET: MSE; 2.02A {Bacillus halodurans C-125}
33003 Probab=97.24 E-value=4e-07 Score=92.08 Aligned_cols=213 Identities=14% Similarity=0.059 Sum_probs=118.2 Template_Neff=11.700
33004
33005 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILD-TCSRDTYALEQSLTFVQ 121 (908)
33006 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d-~~~~~~~a~~~~~~~~~ 121 (908)
33007 .++++||++.|.... .++.....+++.++++.+ + ++.+.+ +..++ +...+.++
33008 T Consensus 2 ~~~~~Igvl~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~~----~~~~~~~~ 55 (305)
33009 T 3G1W_B 2 SLNETYMMITFQSGM------------DYWKRCLKGFEDAAQALN--------V--TVEYRGAAQYDI----QEQITVLE 55 (305)
33010 T ss_dssp --CCEEEEEEESTTS------------THHHHHHHHHHHHHHHHT--------C--EEEEEEESSSCH----HHHHHHHH
33011 T ss_pred CCCeEEEEEecCCCC------------hHHHHHHHHHHHHHHHcC--------C--EEEEecccCCCH----HHHHHHHH
33012 Confidence 357899999997632 245567778887777642 3 333444 32222 12223333
33013
33014
33015 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
33016 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
33017 +++. ++++++|+...+... ......+...++|+|..+...+. .++++++.++..
33018 T Consensus 56 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~ 110 (305)
33019 T 3G1W_B 56 QAIA-------------------KNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSGAPD------SHAHSFLGTNNY 110 (305)
33020 T ss_dssp HHHH-------------------HCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCTT------SCCSCEEECCHH
33021 T ss_pred HHHH-------------------cCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCCCC------ccccEEEeCCHH
33022 Confidence 3332 467877764433322 23445566779999987654321 245667777777
33023
33024
33025 Q NP_000836.2 201 YQAQAMVDIVTAL--GWNYVSTLASEG-NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNAR 276 (908)
33026 Q Consensus 201 ~~~~~~~~~l~~~--~~~~v~ii~~~~-~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 276 (908)
33027 ..+..+++++.+. +.++++++.... .....+.+++++.+++. +..+..........+..+....++++++. .++|
33028 T Consensus 111 ~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 189 (305)
33029 T 3G1W_B 111 NAGMNAAYKMAELLDGEGEVAVITLPNQLNHQERTTGFKETLEAE-FPAIEVIAVEDGRGDSLHSRRVAHQLLEDYPNLA 189 (305)
33030 T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECTTCHHHHHHHHHHHHHHHHH-CTTEEEEEEEECTTCHHHHHHHHHHHHHHCTTEE
33031 T ss_pred HHHHHHHHHHHHHcCCCcEEEEEECCCcccHHHHHHHHHHHHHHH-CCCeEEEEEecCCCChHHHHHHHHHHHHHCCCcc
33032 Confidence 7777888887655 778999998532 45566777888877654 23222111111001112334445555421 2477
33033
33034
33035 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
33036 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
33037 +|++.. +..+..+++++++.+...++.+++.
33038 T Consensus 190 ~i~~~~-~~~a~~~~~~l~~~~~~~~v~ii~~ 220 (305)
33039 T 3G1W_B 190 GIFATE-ANGGVGVGDAVRLESRAGEIQIISF 220 (305)
33040 T ss_dssp EEEESS-HHHHHHHHHHHHHTTCTTTSEEEEE
33041 T ss_pred EEEEec-CCcchHHHHHHHHccCCCCEEEEEE
33042 Confidence 787664 3455667777777664323444443
33043
33044
33045 No 201
33046 >5XSD_B Periplasmic binding protein/LacI transcriptional regulator; Two component system, histidine kinase; 2.5A {Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)}
33047 Probab=97.23 E-value=4.3e-07 Score=91.87 Aligned_cols=217 Identities=17% Similarity=0.071 Sum_probs=121.3 Template_Neff=11.900
33048
33049 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
33050 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
33051 ......++||++.|..+. .++..+..+++.++++.+ +++.+...+. .++ +...+.
33052 T Consensus 13 ~~~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~-~~~----~~~~~~ 67 (306)
33053 T 5XSD_B 13 EKEPIKPKIVLISHIKTN------------PYWLDIKAGAERAAKERG--------AVVEFLGPTT-AST----EDGLKL 67 (306)
33054 T ss_dssp ---CCCCEEEEECSCSSC------------HHHHHHHHHHHHHHHHHT--------CEEEEECCSS-CCH----HHHHHH
33055 T ss_pred cCCCCCCeEEEEecCCCC------------HHHHHHHHHHHHHHHHcC--------CEEEEeCCCC-CCH----HHHHHH
33056 Confidence 345578999999986542 255677888888887753 3444433222 221 122233
33057
33058
33059 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVI-GAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
33060 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vI-g~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
33061 ++++.. .++|++| ++..+.........+...++|+|..+...+. .++++++.++
33062 T Consensus 68 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d 122 (306)
33063 T 5XSD_B 68 FDMATS-------------------AKVSGIITYVQEEGQYKKKINSAMEKGIPVVTIASDEED------SNRIAYVGTD 122 (306)
33064 T ss_dssp HHHHHH-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCCS------SCCSEEEEEC
33065 T ss_pred HHHHHh-------------------CCCCEEEEeCCChhHHHHHHHHHHHCCCCEEEEcCCCCC------cCCeEEEecC
33066 Confidence 333332 4778777 4433332223445566789999987654321 2456677777
33067
33068
33069 Q NP_000836.2 199 DSYQAQAMVDIVTAL-GW-NYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-P 273 (908)
33070 Q Consensus 199 ~~~~~~~~~~~l~~~-~~-~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~ 273 (908)
33071 ....+..+++++.+. +. ++++++.. ++.++..+.++|++.+++.+.+.+....... .+..+....+++++.. .
33072 T Consensus 123 ~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 200 (306)
33073 T 5XSD_B 123 NVLAGQVAGKEMVKQIGTSGNVAIVMGGKNVKNQKERVEGFTQYIKSNSNLKIVDTDSSD--AMLLEAEIITRKILNRND 200 (306)
33074 T ss_dssp HHHHHHHHHHHHHHHHCSSSEEEEECSCTTCHHHHHHHHHHHHHHHHHCCCEEECCCCTT--TTTCCHHHHHHHHHHHCT
33075 T ss_pred HHHHHHHHHHHHHHHHCCCceEEEEECCCCcccHHHHHHHHHHHHHhcCCcEEeeeecCc--hhHHHHHHHHHHHHHhCC
33076 Confidence 777777888887654 65 88998875 3345667778888877764213332211111 1112233445555421 2
33077
33078
33079 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSD 309 (908)
33080 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~ 309 (908)
33081 ++++|++.. +..+..+++++++.|+..++.+++.+
33082 T Consensus 201 ~~~~i~~~~-~~~a~~~~~~~~~~g~~~~~~vi~~~ 235 (306)
33083 T 5XSD_B 201 NINALFCTS-ALDGIGAARAVKDLNYKDRVKIICFD 235 (306)
33084 T ss_dssp TCCEEEESS-HHHHHHHHHHHHHTTCBTTBEEEEES
33085 T ss_pred CCCEEEECC-cchHHHHHHHHHHcCCCCCeEEEEeC
33086 Confidence 467776654 44566777777777763234444443
33087
33088
33089 No 202
33090 >5DKV_A ABC transporter substrate binding protein; Solute Binding Protein, ENZYME FUNCTION; HET: T6T; 1.68A {Agrobacterium vitis (strain S4 / ATCC BAA-846)}
33091 Probab=97.23 E-value=4.3e-07 Score=92.85 Aligned_cols=219 Identities=10% Similarity=0.013 Sum_probs=124.2 Template_Neff=11.500
33092
33093 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDT-CSRDTYALEQSLTFV 120 (908)
33094 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~-~~~~~~a~~~~~~~~ 120 (908)
33095 .++.++||++.|..+. ..+.....+++.++++.| + ++.+.+. ..++ +...+.+
33096 T Consensus 24 ~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~l~~~~~~~~~~----~~~~~~~ 77 (324)
33097 T 5DKV_A 24 ENKKFRIALIPGLTTD------------AFYITMHKGAEAAAAAIG--------A--QIIFQGAPDFNP----VTQVPVL 77 (324)
33098 T ss_dssp SSCCCEEEEECSCSSC------------HHHHHHHHHHHHHHHHHT--------C--EEEECCCSSSCH----HHHHHHH
33099 T ss_pred cCCCcEEEEEeCCCCC------------HHHHHHHHHHHHHHHHhC--------C--EEEEeCCCCCCH----HHHHHHH
33100 Confidence 3468999999887542 245677788888887753 2 3333433 2222 2233344
33101
33102
33103 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELS----DNTRYDFFSRV 195 (908)
33104 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~----~~~~~~~~~~~ 195 (908)
33105 ++++. ++++++|+...+... ......+...++|+|..+...+... .....++++++
33106 T Consensus 78 ~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~~~~~~~~~~~~~~~v 138 (324)
33107 T 5DKV_A 78 DAVIA-------------------KKPDAILIAPTDTTQLVQPLKKAADAGIPMITVDTFIGTGDYQTGAGDGDFPLSYI 138 (324)
33108 T ss_dssp HHHHT-------------------TCCSEEEECCSCTTTTHHHHHHHHHTTCCEEEESSCSTTSCCSSSCSTTCCSSCEE
33109 T ss_pred HHHHH-------------------hCCCEEEECCCCchHhHHHHHHHHHCCCCEEEEcCCCCCCcccCCCCCCCCCcEEE
33110 Confidence 44332 467877764433322 2444556678999998775433100 00013456777
33111
33112
33113 Q NP_000836.2 196 VPPDSYQAQAMVDIVT-ALGWNYVSTLAS---EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE 271 (908)
33114 Q Consensus 196 ~~~~~~~~~~~~~~l~-~~~~~~v~ii~~---~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~ 271 (908)
33115 .++....++.+++++. +.+.++++++.. ++.++..+.++|++.+++..++.+....... .+..+....+++++.
33116 T Consensus 139 ~~d~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~ 216 (324)
33117 T 5DKV_A 139 ASDNVLGGEIAARSLALAIGDKGKVYVSNVKPGVSTTDQREQGFKSEMAKHPGITVLETQFND--NDANKAASQLQAVYA 216 (324)
33118 T ss_dssp EECHHHHHHHHHHHHHHHTTTCEEEEEEESCTTCHHHHHHHHHHHHHHTTCTTEEECCCEECT--TCHHHHHHHHHHHHH
33119 T ss_pred ecCHHHHHHHHHHHHHHHHCCCceEEEEEcCCCCChHHHHHHHHHHHHhhCCCcEEEEeeeCC--CCHHHHHHHHHHHHH
33120 Confidence 7887777888888874 667788888875 3345667778888877654124433221111 112234445555543
33121
33122
33123 Q NP_000836.2 272 T-PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
33124 Q Consensus 272 ~-~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
33125 . .++++|++.. +..+..+++++++.|...++.+++.
33126 T Consensus 217 ~~~~~~~i~~~~-~~~a~~~~~al~~~g~~~~i~i~~~ 253 (324)
33127 T 5DKV_A 217 RNPDLAGVFGAN-LFSGLGSANGVQQAGQSGTIKVVAF 253 (324)
33128 T ss_dssp HCTTCCEEEECS-HHHHHHHHHHHHHTTCBTTBEEEEE
33129 T ss_pred HCCCccEEEEcC-cchhHHHHHHHHHcCCCCceEEEEe
33130 Confidence 1 2467776654 4456678888887776323444443
33131
33132
33133 No 203
33134 >1ZVV_B Glucose-resistance amylase regulator/HPr-like protein crh/DNA; ccpa crh dna; HET: SEP, IOD; 2.98A {Bacillus subtilis} SCOP: c.93.1.1, a.35.1.5
33135 Probab=97.23 E-value=4.3e-07 Score=93.15 Aligned_cols=204 Identities=11% Similarity=0.116 Sum_probs=120.1 Template_Neff=11.700
33136
33137 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
33138 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
33139 ..+.++||++.|..+. .++..+..+++.++++.+ + ++.+.+...++ +...+.++
33140 T Consensus 57 ~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~~~ 110 (332)
33141 T 1ZVV_B 57 SKKTTTVGVIIPDISN------------IFYAELARGIEDIASMYK--------Y--NIILSNSDQNQ----DKQLHLLN 110 (332)
33142 T ss_dssp HTCCSEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT--------C--EEEEEECTTCH----HHHHHHHH
33143 T ss_pred cCCCCEEEEEeCCCCC------------hHHHHHHHHHHHHHHHcC--------C--eEEEEeCCCCH----HHHHHHHH
33144 Confidence 4568899999987542 245667778887777642 2 33444443332 12223344
33145
33146
33147 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
33148 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
33149 +++. .++|++|+...+. .......+...++|+|..+...+ .+..+.+.++...
33150 T Consensus 111 ~l~~-------------------~~~d~ii~~~~~~-~~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~ 163 (332)
33151 T 1ZVV_B 111 NMLG-------------------KQVDGIIFMSGNV-TEEHVEELKKSPVPVVLAASIES-------TNQIPSVTIDYEQ 163 (332)
33152 T ss_dssp HHHH-------------------HTCSEEEECCSCC-CHHHHHHHTTCSSCEEEESCCCT-------TCCSCEECCCHHH
33153 T ss_pred HHHh-------------------CCCCEEEEeCCCC-CHHHHHHHHhCCCCEEEECCCCC-------CCCCCEEEeCHHH
33154 Confidence 4332 4788888754443 23445556678999998765322 1345566667767
33155
33156
33157 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGN---YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARA 277 (908)
33158 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~---~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
33159 .+..+++++.+.+.+++++++.+.. .+..+.+++++.+++. ++.+.....+..+.+..+....+++++. ..++|+
33160 T Consensus 164 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
33161 T 1ZVV_B 164 AAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTES-GLPVRDSYIVEGDYTYDSGIEAVEKLLEEDEKPTA 242 (332)
33162 T ss_dssp HHHHHHHHHHHTTCCCEEEECSCTTSHHHHTTHHHHHHHHHHHH-TCCCCTTSCCCCCSSHHHHHHHHHHHHSSSSCCSE
33163 T ss_pred HHHHHHHHHHHCCCCcEEEEeCCCCCcccHHHHHHHHHHHHHHc-CCCCCHHHeecCCCCHHHHHHHHHHHHhcCCCCCE
33164 Confidence 7777888876668889999985433 4567778888887764 3443221111111112234445555542 136788
33165
33166
33167 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
33168 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
33169 |++.. +..+..+++++++.|..
33170 T Consensus 243 i~~~~-~~~a~~~~~~l~~~g~~ 264 (332)
33171 T 1ZVV_B 243 IFVGT-DEMALGVIHGAQDRGLN 264 (332)
33172 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
33173 T ss_pred EEECC-HHHHHHHHHHHHHCCCC
33174 Confidence 87664 44556777888877763
33175
33176
33177 No 204
33178 >4KQ9_A Ribose ABC transporter, substrate binding; ABC transporter, ribose binding, PSI-Biology; HET: GOL; 1.9A {Conexibacter woesei}
33179 Probab=97.22 E-value=4.6e-07 Score=91.20 Aligned_cols=205 Identities=13% Similarity=-0.005 Sum_probs=119.4 Template_Neff=12.100
33180
33181 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
33182 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
33183 ..+.++||++.|.... .++.....+++.++++.+ +++.+.|+..++. ...+.++
33184 T Consensus 4 ~~~~~~Ig~v~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~ 57 (299)
33185 T 4KQ9_A 4 SAAGKKVVYSTFGAQI------------PFFNRIGEGAKAQATVRR----------LDFDISTSEIDPG----KQIDSID 57 (299)
33186 T ss_dssp CCTTCEEEEEEECTTC------------HHHHHHHHHHHHHHHHTT----------CEEEEEEECSSHH----HHHHHHH
33187 T ss_pred ccCceEEEEEeCCCCC------------HHHHHHHHHHHHHHHHcC----------CeEEEecCCCCHH----HHHHHHH
33188 Confidence 4568899999983221 355677788888777632 3444455444322 2233344
33189
33190
33191 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI-MVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
33192 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~-~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
33193 +++. .+++++|+...+.... .....+...++|+|..+...+. ..++++++.+++.
33194 T Consensus 58 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~-----~~~~~~~v~~d~~ 113 (299)
33195 T 4KQ9_A 58 NAVA-------------------QQPDGLIVSPIDGSALVPTIKGAVEDGVPVILLADGLSE-----DVGQLSFVGSDFA 113 (299)
33196 T ss_dssp HHHH-------------------TCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCSS-----CCCCSEEEECCHH
33197 T ss_pred HHHH-------------------cCCCEEEECCCCccccHHHHHHHHHCCCcEEEECCCCCC-----cccceEEEEcCHH
33198 Confidence 3332 4778777644333221 3445566789999987654321 1345677778887
33199
33200
33201 Q NP_000836.2 201 YQAQAMVDIVTAL-G-WNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNA 275 (908)
33202 Q Consensus 201 ~~~~~~~~~l~~~-~-~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 275 (908)
33203 ..++.+++++.+. + .++++++..+. .++..+.++|++.+++. ++.+........ .+..+....+.++++ ..++
33204 T Consensus 114 ~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 191 (299)
33205 T 4KQ9_A 114 EIGRLKATYIADRLGDGGTVAMVNGTRGMSFVEEQGEAAREVFEER-GIEIVDDVYTKA-ITPDEGLTATQNILTRHSDV 191 (299)
33206 T ss_dssp HHHHHHHHHHHHHCCTTCEEEEECCSTTCHHHHHHHHHHHHHHHHH-TCEEEEEECCSS-SCHHHHHHHHHHHHHHCTTC
33207 T ss_pred HHHHHHHHHHHHHhCCCcEEEEEeCCCCChHHHHHHHHHHHHHHhc-CcEEecccccCC-CCHHHHHHHHHHHHHhCCCC
33208 Confidence 7788888887654 6 68999998533 35666778888887765 344432111110 111233344555542 1356
33209
33210
33211 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQ 299 (908)
33212 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
33213 ++|++.. +..+..+++++++.|+
33214 T Consensus 192 ~~i~~~~-~~~~~~~~~~l~~~g~ 214 (299)
33215 T 4KQ9_A 192 GAIYYSG-DDGALGGIRAIAARNI 214 (299)
33216 T ss_dssp CEEEESS-HHHHHHHHHHHHHTTC
33217 T ss_pred CEEEEcC-cchHHHHHHHHHHCCC
33218 Confidence 7776654 3455667788877776
33219
33220
33221 No 205
33222 >5XSS_A Periplasmic binding protein/LacI transcriptional regulator; Two component system, histidine kinase; HET: XYP; 2.093A {Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)}
33223 Probab=97.21 E-value=4.8e-07 Score=92.12 Aligned_cols=217 Identities=16% Similarity=0.063 Sum_probs=119.7 Template_Neff=11.400
33224
33225 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
33226 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
33227 ....++.++||++.|..+. .++..+..+++.++++.+ +++.+...+. .++ +...+
33228 T Consensus 22 ~~~~~~~~~Ig~~~~~~~~------------~~~~~~~~g~~~a~~~~g--------~~~~~~~~~~-~~~----~~~~~ 76 (316)
33229 T 5XSS_A 22 VEKEPIKPKIVLISHIKTN------------PYWLDIKAGAERAAKERG--------AVVEFLGPTT-AST----EDGLK 76 (316)
33230 T ss_dssp ------CCEEEEECSSTTC------------HHHHHHHHHHHHHHHHHT--------CEEEEECCSS-CCH----HHHHH
33231 T ss_pred ccCCCCCCEEEEEeCCCCC------------HHHHHHHHHHHHHHHHcC--------CEEEEeCCCC-CCH----HHHHH
33232 Confidence 3456678999999986542 255677788888887753 3444433222 121 12223
33233
33234
33235 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIG-AAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
33236 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg-~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
33237 .++.+.. +++|++|. +............+...++|+|..+...+. .++++++.+
33238 T Consensus 77 ~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~ 131 (316)
33239 T 5XSS_A 77 LFDMATS-------------------AKVSGIITYVQEEGQYKKKINSAMEKGIPVVTIDSDEED------SNRIAYVGT 131 (316)
33240 T ss_dssp HHHHHHH-------------------TTCSEEEECCCSTTSSHHHHHHHHHTTCCEEEESSCCCS------SCCSEEESB
33241 T ss_pred HHHHHHH-------------------cCCCEEEEccCCcchhHHHHHHHHHCCCCEEEEcCCCCC------CCCeEEEeC
33242 Confidence 3333332 47787774 333322223444566789999987654321 245677777
33243
33244
33245 Q NP_000836.2 198 PDSYQAQAMVDIVTAL-GW-NYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET- 272 (908)
33246 Q Consensus 198 ~~~~~~~~~~~~l~~~-~~-~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~- 272 (908)
33247 +....+..+++++.+. +. ++++++.. ++.++..+.++|++.+++.+.+.+....... ....+....++++++.
33248 T Consensus 132 d~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~ 209 (316)
33249 T 5XSS_A 132 DNVLAGQVAGKEMVKQIGTSGNVAIVMGGKNVKNQKERVEGFTQYIKSNSNLKIVDTDSSD--AMLLEAEIITRKILNRN 209 (316)
33250 T ss_dssp CHHHHHHHHHHHHHHHHCSSSEEEEEESCTTCHHHHHHHHHHHHHHHHHCCCEEEEEEECT--TCHHHHHHHHHHHHHHC
33251 T ss_pred CHHHHHHHHHHHHHHHHCCCceEEEEECCCCchhHHHHHHHHHHHHHhcCCcEEeEEecCc--hHHHHHHHHHHHHHHhC
33252 Confidence 7777788888887654 65 88998875 3345667778888877764213332211111 1111233445555421
33253
33254
33255 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
33256 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
33257 .++++|++.. +..+..+++++++.|+..++.+++.
33258 T Consensus 210 ~~~~~i~~~~-~~~a~~~~~al~~~g~~~~~~iig~ 244 (316)
33259 T 5XSS_A 210 DNINALFCTS-ALDGIGAARAVKDLNYKDRVKIICF 244 (316)
33260 T ss_dssp SCCCEEEECS-HHHHHHHHHHHHHTTCTTTSEEEEE
33261 T ss_pred CCcCEEEECC-chhHHHHHHHHHHcCCCCCeEEEEe
33262 Confidence 2467776654 3446677778877776323444443
33263
33264
33265 No 206
33266 >4YR7_A LuxP; PROTEIN-LIGAND COMPLEX, QUORUM SENSING, signaling; HET: A1B; 2.533A {Vibrio harveyi}
33267 Probab=97.20 E-value=5.1e-07 Score=93.23 Aligned_cols=222 Identities=11% Similarity=0.029 Sum_probs=124.2 Template_Neff=11.500
33268
33269 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
33270 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
33271 ..++++||++.|..+.. ........+++.++++.+. .+.+++.+.|+..++. ...+.++
33272 T Consensus 43 ~~~~~~Ig~i~~~~~~~-----------~~~~~~~~g~~~~~~~~g~------~~~l~~~~~d~~~~~~----~~~~~~~ 101 (345)
33273 T 4YR7_A 43 TQRPIKISVVYPGQQVS-----------DYWVRNIASFEKRLYKLNI------NYQLNQVFTRPNADIK----QQSLSLM 101 (345)
33274 T ss_dssp CSSCEEEEEEEECSCSC-----------CHHHHHHHHHHHHHHHTTC------CEEEEEEEECTTCCHH----HHHHHHH
33275 T ss_pred CCCCeEEEEEecCCCCC-----------HHHHHHHHHHHHHHHHcCC------cEEEEEeecCCCCCHH----HHHHHHH
33276 Confidence 56789999999975322 1334778888888888642 1222224455444322 2333344
33277
33278
33279 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRL-FKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
33280 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~-~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
33281 +++. ++++++|+...+.........+.. .++|+|..+...+.... ...++.+++.+++.
33282 T Consensus 102 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~~-~~~~~~~~v~~d~~ 161 (345)
33283 T 4YR7_A 102 EALK-------------------SKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNITTPVREW-DKHQPFLYVGFDHA 161 (345)
33284 T ss_dssp HHHH-------------------TCCSEEEECCCTTTSHHHHHHHHTTCSSEEEEETCCSCBGGG-GGSCCSEEEECCHH
33285 T ss_pred HHHH-------------------cCCCEEEEeCCchhhHHHHHHHHHhCCCeEEEEcCCCCcchh-ccCCCeEEEEcChH
33286 Confidence 4332 478888876543333333444444 79999987654432111 11346677888888
33287
33288
33289 Q NP_000836.2 201 YQAQAMVDIVTALGWN--YVSTLASE-GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNAR 276 (908)
33290 Q Consensus 201 ~~~~~~~~~l~~~~~~--~v~ii~~~-~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 276 (908)
33291 ..++.+++++.+.+.+ +++++..+ +.++..+.++|++.+++.+++++....... .+..+....+++++.. .+++
33292 T Consensus 162 ~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~ 239 (345)
33293 T 4YR7_A 162 EGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTK--ATKQSGYDAAKASLAKHPDVD 239 (345)
33294 T ss_dssp HHHHHHHHHHHHHSCTTCEEEEECCSTTHHCCCCCCHHHHHHHHHHCCEEEEEECCC--SSHHHHHHHHHHHHHHCCCCS
33295 T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEecCCchhHHHHHHHHHHHHhcCCceEeeccccC--CCHHHHHHHHHHHHHHCCCCc
33296 Confidence 8888888887654443 48888754 446667778888877653223333211111 1122344455555431 2345
33297
33298
33299 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
33300 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
33301 +|++. ++..+..+++++++.|. .++.+++.
33302 T Consensus 240 ~i~~~-~~~~a~~~~~al~~~g~-~~i~i~g~ 269 (345)
33303 T 4YR7_A 240 FIYAC-STDVALGAVDALAELGR-EDIMINGW 269 (345)
33304 T ss_dssp EEEES-SHHHHHHHHHHHHHHTC-TTSEEBCS
33305 T ss_pred EEEEC-ChHHHHHHHHHHHHcCC-CCcEEEee
33306 Confidence 55544 34455667888887776 23344443
33307
33308
33309 No 207
33310 >2IOY_A Periplasmic sugar-binding proteins; Ribose binding protein, sugar binding; HET: RIP; 1.9A {Thermoanaerobacter tengcongensis}
33311 Probab=97.19 E-value=5.3e-07 Score=89.96 Aligned_cols=208 Identities=13% Similarity=0.145 Sum_probs=116.2 Template_Neff=11.900
33312
33313 Q NP_000836.2 46 IILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALIE 125 (908)
33314 Q Consensus 46 i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~~ 125 (908)
33315 .+||++.|..+. .++.....+++.++++.+ +++.+.++..++. ...+.++++..
33316 T Consensus 2 ~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~~----------~~l~~~~~~~~~~----~~~~~~~~l~~ 55 (283)
33317 T 2IOY_A 2 KTIGLVISTLNN------------PFFVTLKNGAEEKAKELG----------YKIIVEDSQNDSS----KELSNVEDLIQ 55 (283)
33318 T ss_dssp CEEEEEESCSSS------------HHHHHHHHHHHHHHHHHT----------CEEEEEECTTCHH----HHHHHHHHHHH
33319 T ss_pred cEEEEEecCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEECCCCCHH----HHHHHHHHHHh
33320 Confidence 578999986542 245667778877777642 3344455433322 22233333332
33321
33322
33323 Q NP_000836.2 126 KDASDVKCANGDPPIFTKPDKISGVIG-AAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
33324 Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~~vIg-~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
33325 ++++++|. +..+.........+...++|+|..+...+. .++.+++.++....++
33326 T Consensus 56 -------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~------~~~~~~v~~d~~~~~~ 110 (283)
33327 T 2IOY_A 56 -------------------QKVDVLLINPVDSDAVVTAIKEANSKNIPVITIDRSANG------GDVVCHIASDNVKGGE 110 (283)
33328 T ss_dssp -------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCSS------SCCSEEEEECHHHHHH
33329 T ss_pred -------------------CCCCEEEECCCChhHHHHHHHHHHHCCCCEEEEcCCCCC------CCeEEEEecChHHHHH
33330 Confidence 46776665 333322223344456689999987754321 2456677777777788
33331
33332
33333 Q NP_000836.2 205 AMVDIVTA--LGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAVI 279 (908)
33334 Q Consensus 205 ~~~~~l~~--~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~viv 279 (908)
33335 .+++++.+ .+.++++++.. ++.++..+.++|++.+++.++..+....... .+..+....++++++ ..++|+|+
33336 T Consensus 111 ~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~i~ 188 (283)
33337 T 2IOY_A 111 MAAEFIAKALKGKGNVVELEGIPGASAARDRGKGFDEAIAKYPDIKIVAKQAAD--FDRSKGLSVMENILQAQPKIDAVF 188 (283)
33338 T ss_dssp HHHHHHHHHTTTCEEEEEEECCTTCHHHHHHHHHHHHHHTTCTTEEEEEEEECT--TCHHHHHHHHHHHHHHCSCCCEEE
33339 T ss_pred HHHHHHHHHcCCCeEEEEEECCCCChhHHHHHHHHHHHHHhCCCeEEEEeecCC--CCHHHHHHHHHHHHHHCCCCCEEE
33340 Confidence 88888765 47789999974 3455667778888877664223332111111 111233344445432 13577776
33341
33342
33343 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
33344 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
33345 +.. +..+..+++++++.|.. ++.+++.
33346 T Consensus 189 ~~~-~~~a~~~~~~l~~~g~~-~~~iig~ 215 (283)
33347 T 2IOY_A 189 AQN-DEMALGAIKAIEAANRQ-GIIVVGF 215 (283)
33348 T ss_dssp ESS-HHHHHHHHHHHHHTTCC-CCEEEEE
33349 T ss_pred EcC-hhHHHHHHHHHHHcccC-CcEEEEe
33350 Confidence 654 34566677777776652 2344443
33351
33352
33353 No 208
33354 >1TLF_C TRYPTIC CORE FRAGMENT OF THE; TRANSCRIPTION REGULATION; HET: IPT, EMC; 2.6A {Escherichia coli} SCOP: c.93.1.1
33355 Probab=97.19 E-value=5.3e-07 Score=91.01 Aligned_cols=200 Identities=12% Similarity=0.076 Sum_probs=116.5 Template_Neff=11.500
33356
33357 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
33358 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
33359 +++||++.|..+. .++..+..+++.++++.+ +++.+...+. .+. +...+.+++++
33360 T Consensus 2 ~~~Ig~v~~~~~~------------~~~~~~~~~~~~a~~~~g--------~~l~~~~~~~-~~~----~~~~~~~~~l~ 56 (301)
33361 T 1TLF_C 2 SLLIGVATSSLAL------------HAPSQIVAAIKSRADQLG--------ASVVVSMVER-SGV----EACKAAVHNLL 56 (301)
33362 T ss_dssp CCEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT--------CEEEEEECCS-SSH----HHHHHHHHHHH
33363 T ss_pred CceEEEEeCcccc------------chHHHHHHHHHHHHHHcC--------CEEEEEecCC-CcH----HHHHHHHHHHH
33364 Confidence 5789999997542 255677788888887753 3333332221 111 12233444433
33365
33366
33367 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
33368 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
33369 . .+++++|+...+.........+...++|+|..+...+ +.++.+.++....+.
33370 T Consensus 57 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~--------~~~~~v~~d~~~~~~ 109 (301)
33371 T 1TLF_C 57 A-------------------QRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQ--------TPINSIIFSHEDGTR 109 (301)
33372 T ss_dssp T-------------------TTCSEEEEESCCCHHHHHHHHHHSTTSCEEESSSCTT--------SSSEEEEECHHHHHH
33373 T ss_pred h-------------------CCCCEEEEeCCCCchHHHHHHHHHcCCCEEEEeCCCC--------CCCCeEEeccHHHHH
33374 Confidence 2 4788888765443322222235678999988765332 234556666666677
33375
33376
33377 Q NP_000836.2 205 AMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARAVIMF 281 (908)
33378 Q Consensus 205 ~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~viv~~ 281 (908)
33379 .+++++.+.+.++++++.. +..+...+.++|++.+++. ++++....... .+..+....+++++.. .++|+|++.
33380 T Consensus 110 ~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~daii~~ 186 (301)
33381 T 1TLF_C 110 LGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRN-QIQPIAEREGD--WSAMSGFQQTMQMLNEGIVPTAMLVA 186 (301)
33382 T ss_dssp HHHHHHHHHTCCSEEEEECCTTSHHHHHHHHHHHHHHHHT-TCCCSEEEECC--SSHHHHHHHHHHHHHTTCCCSEEEES
33383 T ss_pred HHHHHHHHCCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHC-CCCCeeeecCC--CChHHHHHHHHHHHHcCCCCCEEEEC
33384 Confidence 7788776668889999985 3345666778888888775 35443211111 1112233445555421 247788766
33385
33386
33387 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQS 300 (908)
33388 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~ 300 (908)
33389 . +..+..+++++++.|+.
33390 T Consensus 187 ~-~~~a~~~~~~l~~~g~~ 204 (301)
33391 T 1TLF_C 187 N-DQMALGAMRAITESGLR 204 (301)
33392 T ss_dssp S-HHHHHHHHHHHHHTTCC
33393 T ss_pred C-hHHHHHHHHHHHHcCCC
33394 Confidence 4 44567788888877764
33395
33396
33397 No 209
33398 >3OQO_C Catabolite control protein A, Phosphocarrier; pbp fold for ccpa, transcription; HET: SEP, SO4; 2.97A {Bacillus subtilis}
33399 Probab=97.19 E-value=5.3e-07 Score=92.84 Aligned_cols=204 Identities=9% Similarity=0.065 Sum_probs=119.3 Template_Neff=11.500
33400
33401 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
33402 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
33403 ..+.++||++.|..+. .++.....+++.++++.+ + ++.+.+...++ +...+.++
33404 T Consensus 57 ~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~~~ 110 (339)
33405 T 3OQO_C 57 SKKTTTVGVIIPDISS------------IFYSELARGIEDIATMYK--------Y--NIILSNSDQNM----EKELHLLN 110 (339)
33406 T ss_dssp HTCCSEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT--------C--EEEEEECTTCH----HHHHHHHH
33407 T ss_pred cCCCCEEEEEeCCCCC------------hHHHHHHHHHHHHHHHcC--------C--EEEEEeCCCCH----HHHHHHHH
33408 Confidence 4578899999997542 255677788888877642 2 23334433332 22233344
33409
33410
33411 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
33412 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
33413 +++. .++|++|+...+.. ......+...++|+|..+...+ .+..+.+.+++..
33414 T Consensus 111 ~l~~-------------------~~~d~ii~~~~~~~-~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~~~~~ 163 (339)
33415 T 3OQO_C 111 TMLG-------------------KQVDGIVFMGGNIT-DEHVAEFKRSPVPIVLAASVEE-------QEETPSVAIDYEQ 163 (339)
33416 T ss_dssp HHHH-------------------TTCSEEEECCSCCC-HHHHHHHTTCSSCEEEESCCCT-------TCCSCEEECCHHH
33417 T ss_pred HHhc-------------------CCCCEEEEcCCCCC-HHHHHHHHhCCCCEEEEcCCCC-------CCCCCEEEcCHHH
33418 Confidence 3332 47888887544333 3444556678999998765432 1345566677777
33419
33420
33421 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNYG---ESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARA 277 (908)
33422 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~~---~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
33423 .++.+++++.+.+.++++++..+.... ..+.++|++.+++. ++.+........+.+..+....+++++. ..++|+
33424 T Consensus 164 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~ 242 (339)
33425 T 3OQO_C 164 AIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEA-NLPFNEQFVAEGDYTYDSGLEALQHLMSLDKKPTA 242 (339)
33426 T ss_dssp HHHHHHHHHHTTSCSSEEEEECCTTSHHCCCCCCHHHHHHHHTT-TCCCCGGGEEECCSCHHHHHHHHHHHHHSSSCCSE
33427 T ss_pred HHHHHHHHHHHCCCCcEEEEeCCCCCcccHHHHHHHHHHHHHHC-CCCcChhheecCCCChhHHHHHHHHHhhcCCCCCE
33428 Confidence 777888888767888999998544322 45677888877764 3443211111100112233344555542 146788
33429
33430
33431 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
33432 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
33433 |++.. +..+..+++++++.|..
33434 T Consensus 243 i~~~~-~~~a~~~~~~l~~~g~~ 264 (339)
33435 T 3OQO_C 243 ILSAT-DEMALGIIHAAQDQGLS 264 (339)
33436 T ss_dssp EEESS-HHHHHHHHHHHHTTSCC
33437 T ss_pred EEECC-hHHHHHHHHHHHHCCCC
33438 Confidence 87664 44556677788777763
33439
33440
33441 No 210
33442 >4RK6_A Glucose-resistance amylase regulator; sugar binding, transcription regulation, Enzyme; HET: MSE, GLC; 1.76A {Weissella paramesenteroides ATCC 33313}
33443 Probab=97.19 E-value=5.4e-07 Score=90.02 Aligned_cols=205 Identities=10% Similarity=0.066 Sum_probs=115.0 Template_Neff=12.100
33444
33445 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
33446 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
33447 ...++.++||++.|..+. .++.....+++.++++.| +++.+.+...+. +...+.
33448 T Consensus 5 l~~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~----~~~~~~ 58 (287)
33449 T 4RK6_A 5 LSSKRSRVVGVVVPLIHT------------NFADEIIKGLYETTISSG----------YELLITYLDEDE----DHQYQV 58 (287)
33450 T ss_dssp ------CEEEEEEESSCC------------THHHHHHHHHHHHHHHHT----------CEEEEEEECSCH----HHHHHH
33451 T ss_pred hhcCCCCeEEEEecCCCC------------hhHHHHHHHHHHHHHHcC----------CEEEEEECCCCH----HHHHHH
33452 Confidence 344578899999996542 255667778887776643 233444443332 223334
33453
33454
33455 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
33456 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
33457 ++++.. ++++++|+...+... .....+...++|+|..+...+ +.++++.++.
33458 T Consensus 59 ~~~l~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~ip~v~~~~~~~--------~~~~~v~~d~ 110 (287)
33459 T 4RK6_A 59 FQTLLS-------------------RQVGAVFMLSLDIPS-WMIDKLLEEQISVISLTALLS--------EQISAVTSNE 110 (287)
33460 T ss_dssp HHHHHH-------------------TTCSEEEECCSCCCH-HHHHHHHHTTCEEEEESSCCC--------TTSEEEEECH
33461 T ss_pred HHHHHh-------------------CCCCEEEEecCCCCH-HHHHHHHhCCCcEEEeCcccC--------CCCCEEEeCH
33462 Confidence 444332 478888875443332 344556677999988765332 2455666677
33463
33464
33465 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGN---YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLL--ETPN 274 (908)
33466 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~---~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~--~~~~ 274 (908)
33467 ...++.+++++.+.+.++++++..+.. ++..+.++|++.+++. +..+..........+..+....+++++ ...+
33468 T Consensus 111 ~~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 189 (287)
33469 T 4RK6_A 111 FEMMNSIVDYLIDMGHKNIALVGDTKLTTNISSTRRTNFIKSMTDH-NLAYENIFLYGNDHSYETGYTSVTTGYDINQLP 189 (287)
33470 T ss_dssp HHHHHHHHHHHHHTTCCSEEEESBCCCCSSSCCHHHHHHHHHHHHT-TCCGGGEEEECBSSCHHHHHHCCCCCSCTTSCS
33471 T ss_pred HHHHHHHHHHHHHCCCCcEEEEcCCccCCcccHHHHHHHHHHHHHC-CCCcceeEecCCCCChhhhhHHHHhhhhhCCCC
33472 Confidence 777778888876667889999985432 5566778888877764 343221111110011122333344432 1236
33473
33474
33475 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
33476 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
33477 +++|++.. +..+..+++++++.|+.
33478 T Consensus 190 ~~~i~~~~-~~~a~~~~~~l~~~g~~ 214 (287)
33479 T 4RK6_A 190 FTAAIATA-DMVGQGLINAMSDHGKT 214 (287)
33480 T ss_dssp CSEEEESS-HHHHHHHHHHHHHTTCC
33481 T ss_pred CCEEEEcC-cHHHHHHHHHHHHcCCC
33482 Confidence 77776654 44566778888877764
33483
33484
33485 No 211
33486 >4RK7_B Glucose-resistance amylase regulator; sugar binding, transcription regulation, Enzyme; HET: MSE, SUC; 1.8A {Weissella paramesenteroides ATCC 33313}
33487 Probab=97.19 E-value=5.4e-07 Score=90.02 Aligned_cols=205 Identities=10% Similarity=0.066 Sum_probs=115.0 Template_Neff=12.100
33488
33489 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
33490 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
33491 ...++.++||++.|..+. .++.....+++.++++.| +++.+.+...+. +...+.
33492 T Consensus 5 l~~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~----~~~~~~ 58 (287)
33493 T 4RK7_B 5 LSSKRSRVVGVVVPLIHT------------NFADEIIKGLYETTISSG----------YELLITYLDEDE----DHQYQV 58 (287)
33494 T ss_dssp ------CEEEEEEESSCC------------THHHHHHHHHHHHHHHTT----------CEEEEEEECSCH----HHHHHH
33495 T ss_pred hhcCCCCeEEEEecCCCC------------hhHHHHHHHHHHHHHHcC----------CEEEEEECCCCH----HHHHHH
33496 Confidence 344578899999996542 255667778887776643 233444443332 223334
33497
33498
33499 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
33500 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
33501 ++++.. ++++++|+...+... .....+...++|+|..+...+ +.++++.++.
33502 T Consensus 59 ~~~l~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~ip~v~~~~~~~--------~~~~~v~~d~ 110 (287)
33503 T 4RK7_B 59 FQTLLS-------------------RQVGAVFMLSLDIPS-WMIDKLLEEQISVISLTALLS--------EQISAVTSNE 110 (287)
33504 T ss_dssp HHHHHT-------------------TTCSEEEECCTTCCH-HHHHHHHHTTCEEEEESSCCC--------TTSEEEEECH
33505 T ss_pred HHHHHh-------------------CCCCEEEEecCCCCH-HHHHHHHhCCCcEEEeCcccC--------CCCCEEEeCH
33506 Confidence 444332 478888875443332 344556677999988765332 2455666677
33507
33508
33509 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGN---YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLL--ETPN 274 (908)
33510 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~---~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~--~~~~ 274 (908)
33511 ...++.+++++.+.+.++++++..+.. ++..+.++|++.+++. +..+..........+..+....+++++ ...+
33512 T Consensus 111 ~~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 189 (287)
33513 T 4RK7_B 111 FEMMNSIVDYLIDMGHKNIALVGDTKLTTNISSTRRTNFIKSMTDH-NLAYENIFLYGNDHSYETGYTSVTTGYDINQLP 189 (287)
33514 T ss_dssp HHHHHHHHHHHHHTTCCSEEEESBCCCCSSSCCHHHHHHHHHHHHT-TCCGGGEEEECBSSCHHHHHHCCCCCSCTTSCS
33515 T ss_pred HHHHHHHHHHHHHCCCCcEEEEcCCccCCcccHHHHHHHHHHHHHC-CCCcceeEecCCCCChhhhhHHHHhhhhhCCCC
33516 Confidence 777778888876667889999985432 5566778888877764 343221111110011122333344432 1236
33517
33518
33519 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
33520 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
33521 +++|++.. +..+..+++++++.|+.
33522 T Consensus 190 ~~~i~~~~-~~~a~~~~~~l~~~g~~ 214 (287)
33523 T 4RK7_B 190 FTAAIATA-DMVGQGLINAMSDHGKT 214 (287)
33524 T ss_dssp CSEEEESS-HHHHHHHHHHHHHTTCC
33525 T ss_pred CCEEEEcC-cHHHHHHHHHHHHcCCC
33526 Confidence 77776654 44566778888877764
33527
33528
33529 No 212
33530 >4RWE_A Sugar-binding transport protein; structural genomics, The Center for; 1.65A {Yersinia pestis}
33531 Probab=97.17 E-value=6e-07 Score=89.98 Aligned_cols=213 Identities=12% Similarity=0.043 Sum_probs=120.4 Template_Neff=12.000
33532
33533 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
33534 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
33535 .+.++||++.|..+. .++.....+++.++++.| |..+++.+.++..++. ...+.+++
33536 T Consensus 3 ~~~~~Ig~~~~~~~~------------~~~~~~~~g~~~~~~~~~-------g~~~~~~~~~~~~~~~----~~~~~~~~ 59 (292)
33537 T 4RWE_A 3 AELNSIGVTVGDLAN------------PFFVQITKGVELEARKLA-------GDKVKVTLVSSGYDLG----QQVAQIDN 59 (292)
33538 T ss_dssp -CCCEEEEEESCTTS------------HHHHHHHHHHHHHHHHHH-------CTTCEEEEEECTTCHH----HHHHHHHH
33539 T ss_pred cccceEEEEecccCC------------HHHHHHHHHHHHHHHHHc-------CCceEEEEecCCCCHH----HHHHHHHH
33540 Confidence 467899999997542 256678888888888765 2345555556544322 22333443
33541
33542
33543 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
33544 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
33545 ++. ++++++|+...+.. .......+...++|+|..+...+ ++.+++.+++..
33546 T Consensus 60 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~--------~~~~~v~~d~~~ 112 (292)
33547 T 4RWE_A 60 FIA-------------------AKVDMIILNAADSKGIGPAVKRAKDAGIVVVAVDVAAE--------GADATITSDNTQ 112 (292)
33548 T ss_dssp HHH-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCEEEEESSCCT--------TCSEEEEECHHH
33549 T ss_pred HHH-------------------CCCCEEEEeCCCccchHHHHHHHHHCCCEEEEEcCCCC--------CCceEEecCHHH
33550 Confidence 332 46787776443322 22334455667999998765432 135566677777
33551
33552
33553 Q NP_000836.2 202 QAQAMVDIVTALG--WNYVSTLAS-EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
33554 Q Consensus 202 ~~~~~~~~l~~~~--~~~v~ii~~-~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
33555 .++.+++++.+.+ .++++++.. ...++..+.++|++.+++.+++.+....... ..+..+....++++++. .++++
33556 T Consensus 113 ~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 191 (292)
33557 T 4RWE_A 113 AGAMACKYISDRLKEKGNVVIINGPPVSAIQNRVEGCESEFKKYPDIKVLSSNQNA-KGSREGGLEVMTSLLAVNPKIDG 191 (292)
33558 T ss_dssp HHHHHHHHHHHHTTTEEEEEEEBCCSSHHHHHHHHHHHHHHTTCTEEEEEECCCBC-TTSHHHHHHHHHHHHHHCSCCCE
33559 T ss_pred HHHHHHHHHHHHhCCCceEEEEeCCCChHHHHHHHHHHHHHHHCCCcEEEeeccCC-CCcHHHHHHHHHHHHHhCCCCCE
33560 Confidence 7778888775543 778998884 3345556677788777664223332211000 01112233445555421 24566
33561
33562
33563 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
33564 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
33565 |++.. +..+..+++++++.|.. ++.+++.
33566 T Consensus 192 i~~~~-~~~a~~~~~~~~~~g~~-~~~i~~~ 220 (292)
33567 T 4RWE_A 192 VFAIN-DPTAIGADLAAKQAQRN-EFFIVGV 220 (292)
33568 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC-SSEEECS
33569 T ss_pred EEEcC-ChHHHHHHHHHHHcCCC-CeEEEEe
33570 Confidence 66553 44566777788777642 3344443
33571
33572
33573 No 213
33574 >3GV0_A Transcriptional regulator, LacI family; Transcription regulator, PSI-II, 11224e, Structural; 2.35A {Agrobacterium tumefaciens str.}
33575 Probab=97.16 E-value=6.1e-07 Score=89.81 Aligned_cols=207 Identities=8% Similarity=0.078 Sum_probs=116.3 Template_Neff=11.800
33576
33577 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
33578 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
33579 ..++.++||++.|.++.. ..++..+..+++.++++.+ ++ +.+.+...+.. .. ..+
33580 T Consensus 4 ~~~~~~~Ig~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g--------~~--~~~~~~~~~~~----~~-~~~ 58 (288)
33581 T 3GV0_A 4 RTGKTNVIALVLSVDEEL----------MGFTSQMVFGITEVLSTTQ--------YH--LVVTPHIHAKD----SM-VPI 58 (288)
33582 T ss_dssp ---CCCEEEEECBCCCCS----------SCHHHHHHHHHHHHHTTSS--------CE--EEECCBSSGGG----TT-HHH
33583 T ss_pred CCCCccEEEEEeecchHc----------ChHHHHHHHHHHHHHHhcC--------cE--EEEEecCCCcc----cc-hhH
33584 Confidence 345689999999975321 1245667788888877642 33 33344332211 11 112
33585
33586
33587 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
33588 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
33589 .+.+. .+++|++|+...+... .....+...++|+|.++...+ .+..+.+..++.
33590 T Consensus 59 ~~~~~------------------~~~~d~ii~~~~~~~~-~~~~~~~~~~ip~v~~~~~~~-------~~~~~~v~~d~~ 112 (288)
33591 T 3GV0_A 59 RYILE------------------TGSADGVIISKIEPND-PRVRFMTERNMPFVTHGRSDM-------GIEHAFHDFDNE 112 (288)
33592 T ss_dssp HHHHH------------------HTCCSEEEEESCCTTC-HHHHHHHHTTCCEEEESCCCS-------SCCCEEEEECHH
33593 T ss_pred HHHHH------------------hCCCCEEEEeCCCCCC-HHHHHHHHcCCCEEEeCCCCC-------CCCCcEEecCcH
33594 Confidence 22111 1578888876544333 444556678999998776432 123455666666
33595
33596
33597 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGNY--GESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARA 277 (908)
33598 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~~--~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
33599 ..++.+++++.+.+.++++++..+..+ ...+.++|++.+++. ++.+........+.+..+....+++++. ..++|+
33600 T Consensus 113 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~ 191 (288)
33601 T 3GV0_A 113 AYAYEAVERLAQCGRKRIAVIVPPSRFSFHDHARKGFNRGIRDF-GLTEFPIDAVTIETPLEKIRDFGQRLMQSSDRPDG 191 (288)
33602 T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCTTSHHHHHHHHHHHHHHHHT-TCEECCCCSCCTTSCHHHHHHHHHHHTTSSSCCSE
33603 T ss_pred HHHHHHHHHHHHCCCCeEEEECCCCCCchHHHHHHHHHHHHHHc-CCCCCCceeEEeCCCHHHHHHHHHHHHccCCCCCE
33604 Confidence 677778888766788899999864433 445677888877764 3433221001100111233344555532 236788
33605
33606
33607 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
33608 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
33609 |++.. +..+..+++++++.|..
33610 T Consensus 192 i~~~~-~~~a~~~~~~l~~~g~~ 213 (288)
33611 T 3GV0_A 192 IVSIS-GSSTIALVAGFEAAGVK 213 (288)
33612 T ss_dssp EEESC-HHHHHHHHHHHHTTTCC
33613 T ss_pred EEEcC-HHHHHHHHHHHHHcCCC
33614 Confidence 77664 44566778888877764
33615
33616
33617 No 214
33618 >5HKO_A ABC transporter, carbohydrate uptake transporter-2; ABC TRANSPORTER SOLUTE BINDING PROTEIN; HET: ACT, 62W, IMD, ZN; 1.2A {Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)}
33619 Probab=97.16 E-value=6.3e-07 Score=92.68 Aligned_cols=214 Identities=13% Similarity=0.076 Sum_probs=118.8 Template_Neff=10.600
33620
33621 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
33622 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
33623 ...++.++||++.|... .++.....+++.++++.+ +++.+.|...+.. ...+.
33624 T Consensus 28 ~~~~~~~~Ig~v~~~~~-------------~~~~~~~~g~~~a~~~~g----------~~l~~~~~~~~~~----~~~~~ 80 (348)
33625 T 5HKO_A 28 AANSDTKRIGVTVYDMS-------------SFITEGKEGMDTYAKANN----------IELVWNSANNDVS----TQASQ 80 (348)
33626 T ss_dssp -----CEEEEEEESCCC-------------HHHHHHHHHHHHHHHHTT----------EEEEEEECTTCHH----HHHHH
33627 T ss_pred cccCCCcEEEEEECCCC-------------HHHHHHHHHHHHHHHHCC----------CEEEEecCCCCHH----HHHHH
33628 Confidence 45567899999998652 245566777777776642 3444555443321 22233
33629
33630
33631 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
33632 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
33633 +++++. .+++++|....+.. .......+...++|+|..+...+. .++++++.++
33634 T Consensus 81 i~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d 135 (348)
33635 T 5HKO_A 81 VDSLIN-------------------QGVDAIIVVPVQADSLGPQVASAKSKGIPLLAVNAALET------PDLAGNVQPD 135 (348)
33636 T ss_dssp HHHHHH-------------------TTCSEEEEECSCSSCCHHHHHHHHHTTCCEEEESSCCCC------TTCSEEEEEC
33637 T ss_pred HHHHHH-------------------CCCCEEEEeCCCccccHHHHHHHHHCCCCEEEEcCCCCC------CCCceEEcCC
33638 Confidence 343332 46787776443322 223445566789999987654321 2345677777
33639
33640
33641 Q NP_000836.2 199 DSYQAQAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-- 272 (908)
33642 Q Consensus 199 ~~~~~~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-- 272 (908)
33643 +...++.+++++.+. +.++++++.. ++.+...+.++|++.+++.+++.+....... .+..+....+++++..
33644 T Consensus 136 ~~~~g~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~ 213 (348)
33645 T 5HKO_A 136 DVAAGAQEMQMMADRLGGKGNIVILQGPLGGSGEINRGKGIDQVLAKYPDIKVLAKDTAN--WKRDEAVNKMKNWISSFG 213 (348)
33646 T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEECSTTSHHHHHHHHHHHHHHTTCTTEEEEEEEECT--TCHHHHHHHHHHHHHHHG
33647 T ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEECCCCChHHHHHHHHHHHHHHhCCCcEEEEeecCC--CCHHHHHHHHHHHHHHhC
33648 Confidence 777777888877544 6788999885 3345566777888877663223332111111 1112333445555421
33649
33650
33651 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSD 309 (908)
33652 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~ 309 (908)
33653 .++|+|++.. +..+..+++++++.|.. ++.+++.+
33654 T Consensus 214 ~~~d~I~~~~-d~~a~~~~~al~~~g~~-~i~iig~d 248 (348)
33655 T 5HKO_A 214 PQIDGVVAQN-DDMGLGALQALKEAGRT-GVPIVGID 248 (348)
33656 T ss_dssp GGCCEEEESS-HHHHHHHHHHHHHTTCC-SCCEECSB
33657 T ss_pred CCCCEEEECC-hHHHHHHHHHHHHcCCC-CCCEEEec
33658 Confidence 2477777664 44566778888877763 33444443
33659
33660
33661 No 215
33662 >4RXU_A Periplasmic sugar-binding protein; SUGAR TRANSPORTER, ABC-TYPE, ENZYME FUNCTION; HET: BGC, CIT; 1.4A {Chloroflexus aurantiacus}
33663 Probab=97.15 E-value=6.5e-07 Score=93.42 Aligned_cols=153 Identities=17% Similarity=0.075 Sum_probs=91.9 Template_Neff=10.900
33664
33665 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
33666 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
33667 ....++.++||++.|..+. .++..+..+++.++++.| +++.+.|...+. +...+
33668 T Consensus 24 ~~~~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~a~~~~g----------~~l~~~~~~~~~----~~~~~ 77 (367)
33669 T 4RXU_A 24 STGNTQQLAVGIVLPTKDE------------PRWIQDETRFREALQQAG----------YQVEILFSQGSS----AKEKE 77 (367)
33670 T ss_dssp ----CEEEEEEEEESCSSS------------THHHHHHHHHHHHHHHHT----------EEEEEEECTTCH----HHHHH
33671 T ss_pred CCCCCCCeEEEEEeCCCCC------------hHHHhHHHHHHHHHHHcC----------CEEEEEecCCCH----HHHHH
33672 Confidence 3456678999999997542 255677788888887753 344445544332 22333
33673
33674
33675 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGA-AASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
33676 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~-~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
33677 .+++++. ++++++|.. ..+.........+...++|+|..+...+. ..++.+++.+
33678 T Consensus 78 ~i~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvi~~~~~~~~-----~~~~~~~v~~ 133 (367)
33679 T 4RXU_A 78 NVEALIA-------------------KGIKVLIICPHDGTAAAAAAEAARAAGVKVISYDRLIRE-----TDAVDYYVTF 133 (367)
33680 T ss_dssp HHHHHHH-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCEEEEESSCCCS-----CSCCCEEEEE
33681 T ss_pred HHHHHHH-------------------cCCCEEEEcCCChhHHHHHHHHHHHCCCEEEEecCCCCC-----CCCccEEEEc
33682 Confidence 3444332 467766643 33333334455567789999987764432 1244567777
33683
33684
33685 Q NP_000836.2 198 PDSYQAQAMVDIVTAL--GWNYVSTLA---SEGNYGESGVEAFTQISRE 241 (908)
33686 Q Consensus 198 ~~~~~~~~~~~~l~~~--~~~~v~ii~---~~~~~~~~~~~~~~~~~~~ 241 (908)
33687 ++...++.+++++.+. +.++++++. .++.+...+.++|++.+++
33688 T Consensus 134 d~~~~g~~~~~~l~~~~~g~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 182 (367)
33689 T 4RXU_A 134 DSIAVGAQQAQYLVDHASGTGNPLYLYAGAASDNNAFLFFEGAWKVLQP 182 (367)
33690 T ss_dssp CHHHHHHHHHHHHHHTCCSSCEEEEECBCCTTSHHHHHHHHHHHHHHHH
33691 T ss_pred CHHHHHHHHHHHHHHHccCCCCcEEEEecCCCChhHHHHHHHHHHHHHH
33692 Confidence 7777788888887654 778899886 2334555666677666654
33693
33694
33695 No 216
33696 >4KMR_A Transcriptional regulator, LacI family; Structural Genomics, PSI-Biology, Midwest Center; 1.45A {Sanguibacter keddieii}
33697 Probab=97.14 E-value=6.7e-07 Score=88.91 Aligned_cols=201 Identities=12% Similarity=0.072 Sum_probs=113.6 Template_Neff=12.100
33698
33699 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
33700 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
33701 +..+||++.|..+. .++.....+++.++++.| +.+.+.|+..++. ...+.++++
33702 T Consensus 2 ~~~~Ig~v~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~~~ 55 (280)
33703 T 4KMR_A 2 RSGVIGLAVPELGQ------------AFFAQLADEVIRVAAEQD----------LVVLVEQTGGLRE----RELEALRNP 55 (280)
33704 T ss_dssp CCSEEEEEESCTTS------------HHHHHHHHHHHHHHHTTT----------CEEEEEECTTCHH----HHHHHHHCG
33705 T ss_pred CcceEEEEeCccch------------HHHHHHHHHHHHHHHHCC----------CEEEEEecCCchH----HHHHHHHhh
33706 Confidence 46789999987542 256678888888887763 2334445433321 222333333
33707
33708
33709 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
33710 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
33711 +. +++|++|+...+..... ..+...++|+|..+...+ .++.+.+.+++...+
33712 T Consensus 56 ~~-------------------~~~d~ii~~~~~~~~~~--~~~~~~~ip~v~~~~~~~-------~~~~~~v~~d~~~~~ 107 (280)
33713 T 4KMR_A 56 RL-------------------SLTDGLLLAPLGLTQDD--VLPDPAGRPLVVLGEPLF-------PGPVDHVTMQHEAAA 107 (280)
33714 T ss_dssp GG-------------------TTCSCEEECCSSCC-CC--C------CCEEEESSSCC-------CSSCEEECCCHHHHH
33715 T ss_pred HH-------------------hcCCEEEEecCCCCCcc--cCcCcCCCcEEEECCCCC-------CCCCCEEEcCHHHHH
33716 Confidence 32 47888876544332221 234678999998776432 134566677777777
33717
33718
33719 Q NP_000836.2 204 QAMVDIVTALGWNYVSTLASEG----NYGESGVEAFTQISREIGGVCIAQSQKIP-REPRPGEFEKIIKRLLE-TPNARA 277 (908)
33720 Q Consensus 204 ~~~~~~l~~~~~~~v~ii~~~~----~~~~~~~~~~~~~~~~~~~i~v~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
33721 +.+++++.+.+.++++++..+. .++..+.+++++.+++. ++.+.....+. ...+..+....++++++ ..++++
33722 T Consensus 108 ~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (280)
33723 T 4KMR_A 108 RAATEHLLGLGRRRVMLLGAHATERTGVAALRYAGYREALTAA-GLAVDDDLVVPVETWDRSSGAEAMARVLDAGVRMDA 186 (280)
33724 T ss_dssp HHHHHHHHHTTCCCEEEETSCSSCCCHHHHHHHHHHHHHHHHT-TCCCCGGGEECCSSCSHHHHHHHHHHHHHTTCCCSE
33725 T ss_pred HHHHHHHHHCCCCeEEEEecCcccCchhHHHHHHHHHHHHHHc-CCCCCCCeEeecCCCChhHHHHHHHHHHHcCCCCCE
33726 Confidence 7888888767889999998543 35566778888888765 34433211111 00111223344455442 135777
33727
33728
33729 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
33730 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
33731 |++.. +..+..+++++++.|+.
33732 T Consensus 187 i~~~~-~~~a~~~~~~~~~~g~~ 208 (280)
33733 T 4KMR_A 187 VFAMN-DDLALGALRSLQERGVA 208 (280)
33734 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
33735 T ss_pred EEECC-HHHHHHHHHHHHHCCCC
33736 Confidence 77664 44566778888877764
33737
33738
33739 No 217
33740 >3L6U_A ABC-TYPE SUGAR TRANSPORT SYSTEM PERIPLASMIC; structural genomics, NYSGRC, target 11006s; HET: MSE, SO4; 1.9A {Exiguobacterium sibiricum}
33741 Probab=97.14 E-value=6.8e-07 Score=89.71 Aligned_cols=205 Identities=11% Similarity=0.062 Sum_probs=114.7 Template_Neff=11.700
33742
33743 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
33744 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
33745 .++.++||++.|..+. .++.....+++.++++.+ +++.+.+...++. ...+.++
33746 T Consensus 5 ~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~~----~~~~~~~ 58 (293)
33747 T 3L6U_A 5 SPKRNIVGFTIVNDKH------------EFAQRLINAFKAEAKANK----------YEALVATSQNSRI----SEREQIL 58 (293)
33748 T ss_dssp ----CEEEEEESCSCS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECSSCHH----HHHHHHH
33749 T ss_pred CCCCcEEEEEECCCCC------------HHHHHHHHHHHHHHHHCC----------CeEEEecCCCCHH----HHHHHHH
33750 Confidence 4567899999987542 245667788888877652 2344444433321 2223333
33751
33752
33753 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
33754 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
33755 +++. +++|++|+...+... ......+...++|+|..+...+. .++++++.+++.
33756 T Consensus 59 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~ 113 (293)
33757 T 3L6U_A 59 EFVH-------------------LKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDRMIRS------DAVVSSITSNNQ 113 (293)
33758 T ss_dssp HHHH-------------------TTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESSCCCC------TTCSEEEEECHH
33759 T ss_pred HHHh-------------------cCCCEEEEecCCcchHHHHHHHHHHcCCCEEEEcCCCCC------CccceEEecChH
33760 Confidence 3332 478888765433322 24445566789999987654321 245667777777
33761
33762
33763 Q NP_000836.2 201 YQAQAMVDIVTAL-------GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE 271 (908)
33764 Q Consensus 201 ~~~~~~~~~l~~~-------~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~ 271 (908)
33765 ..++.+++++.+. +.++++++.. +..++..+.+++++.+++.+.+.+....... .+..+....++++++
33766 T Consensus 114 ~~~~~~~~~l~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~ 191 (293)
33767 T 3L6U_A 114 MIGEQLASYIKNELIKQTGRSTGRIVEITGTANVYTTNERHRGFLKGIENEPTLSIVDSVSGN--YDPVTSERVMRQVID 191 (293)
33768 T ss_dssp HHHHHHHHHHHHHHHHHHSCSCEEEEEEECSTTCHHHHHHHHHHHHHHTTCTTEEEEEEEECT--TCHHHHHHHHHHHHH
33769 T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEEEcCCCChhHHHHHHHHHHHHHhCCCceEEeeeeCC--CCHHHHHHHHHHHHH
33770 Confidence 7777777776432 4578988875 3345666777888877664222332111111 111223344455542
33771
33772
33773 Q NP_000836.2 272 T-PNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
33774 Q Consensus 272 ~-~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
33775 . .++++|++.. +..+..+++++++.|+.
33776 T Consensus 192 ~~~~~~~i~~~~-~~~a~~~~~al~~~g~~ 220 (293)
33777 T 3L6U_A 192 SGIPFDAVYCHN-DDIAMGVLEALKKAKIS 220 (293)
33778 T ss_dssp TTCCCSEEEESS-HHHHHHHHHHHHHTTCC
33779 T ss_pred hCCCCCEEEECC-hHHHHHHHHHHHHCCCC
33780 Confidence 1 2477777664 44566778888877764
33781
33782
33783 No 218
33784 >2DRI_A D-RIBOSE-BINDING PROTEIN COMPLEXED WITH BETA-D-RIBOSE; SUGAR TRANSPORT; HET: RIP; 1.6A {Escherichia coli} SCOP: c.93.1.1
33785 Probab=97.14 E-value=6.8e-07 Score=88.20 Aligned_cols=207 Identities=14% Similarity=0.114 Sum_probs=116.2 Template_Neff=12.400
33786
33787 Q NP_000836.2 46 IILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALIE 125 (908)
33788 Q Consensus 46 i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~~ 125 (908)
33789 .+||++.|..+. ..+.....+++.++++.| +++.+.|+..+.. ...+.++++..
33790 T Consensus 2 ~~Ig~~~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~~~~~ 55 (271)
33791 T 2DRI_A 2 DTIALVVSTLNN------------PFFVSLKDGAQKEADKLG----------YNLVVLDSQNNPA----KELANVQDLTV 55 (271)
33792 T ss_dssp CEEEEEESCSSS------------HHHHHHHHHHHHHHHHHT----------CEEEEEECTTCHH----HHHHHHHHHTT
33793 T ss_pred CeEEEEeCCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEEcCCCCHH----HHHHHHHHHHH
33794 Confidence 478888887542 255677788888887753 3344455433321 22233333332
33795
33796
33797 Q NP_000836.2 126 KDASDVKCANGDPPIFTKPDKISGVI-GAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
33798 Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~~vI-g~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
33799 +++++++ ++..+.........+.+.++|+|..+...+. .++++++.+++...++
33800 T Consensus 56 -------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~------~~~~~~v~~d~~~~~~ 110 (271)
33801 T 2DRI_A 56 -------------------RGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATK------GEVVSHIASDNVLGGK 110 (271)
33802 T ss_dssp -------------------TTEEEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCSS------SCCSEEEEECHHHHHH
33803 T ss_pred -------------------CCCCEEEEecCCcchHHHHHHHHHHCCCCEEEEcCCCCC------CceEEEEEeCcHHHHH
33804 Confidence 3566554 4433333334445567789999987754321 2456777777777788
33805
33806
33807 Q NP_000836.2 205 AMVDIVTALGW--NYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARAVI 279 (908)
33808 Q Consensus 205 ~~~~~l~~~~~--~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~viv 279 (908)
33809 .+++++.+.+. .+++++.. +..++..+.+++++.+++. ++++....... .+..+....+++++.. .++++|+
33810 T Consensus 111 ~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~ 187 (271)
33811 T 2DRI_A 111 IAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAH-KFNVLASQPAD--FDRIKGLNVMQNLLTAHPDVQAVF 187 (271)
33812 T ss_dssp HHHHHHHHHHCTTCEEEEEECCTTCHHHHHHHHHHHHHHHHH-TCEEEEEEECT--TCHHHHHHHHHHHHHHCTTCCEEE
33813 T ss_pred HHHHHHHHHhCCCceEEEEEcCCCChhHHHHHHHHHHHHHhc-CceEEEeecCC--CcHHHHHHHHHHHHHHCCCCCEEE
33814 Confidence 88888755432 35666652 3445667778888888775 35543221111 1122344445555421 2477776
33815
33816
33817 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
33818 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
33819 +.. +..+..+++++++.|.. ++.+++.
33820 T Consensus 188 ~~~-~~~~~~~~~~~~~~g~~-~~~i~~~ 214 (271)
33821 T 2DRI_A 188 AQN-DEMALGALRALQTAGKS-DVMVVGF 214 (271)
33822 T ss_dssp ESS-HHHHHHHHHHHHHHTCC-SCEEEEE
33823 T ss_pred eCC-HHHHHHHHHHHHHcCCC-CcEEEEe
33824 Confidence 654 34466777888777652 3344443
33825
33826
33827 No 219
33828 >3D02_A Putative LACI-type transcriptional regulator; YP_001338366.1, periplasmic sugar-binding protein, Structural; HET: GOL; 1.3A {Klebsiella pneumoniae subsp. pneumoniae}
33829 Probab=97.14 E-value=6.9e-07 Score=90.14 Aligned_cols=214 Identities=13% Similarity=0.071 Sum_probs=117.2 Template_Neff=11.800
33830
33831 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
33832 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
33833 .++++||++.|..+. .++.....+++.++++++ +++.+. .+...++ ....+.+++
33834 T Consensus 2 ~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~-~~~~~~~----~~~~~~~~~ 56 (303)
33835 T 3D02_A 2 AAEKTVVNISKVDGM------------PWFNRMGEGVVQAGKEFN--------LNASQV-GPSSTDA----PQQVKIIED 56 (303)
33836 T ss_dssp --CEEEEEECSCSSC------------HHHHHHHHHHHHHHHHTT--------EEEEEE-CCSSSCH----HHHHHHHHH
33837 T ss_pred CCceEEEEEeCCCCC------------hHHHHHHHHHHHHHHHcC--------CEEEEe-CCCCCCH----HHHHHHHHH
33838 Confidence 357899999997542 255677888888888763 344443 2332332 223334444
33839
33840
33841 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGA-AASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
33842 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~-~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
33843 ++. ++++++|+. ..+.........+...++|+|......+. .++++++..+...
33844 T Consensus 57 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~~~~~~~~ 111 (303)
33845 T 3D02_A 57 LIA-------------------RKVDAITIVPNDANVLEPVFKKARDAGIVVLTNESPGQP------SANWDVEIIDNEK 111 (303)
33846 T ss_dssp HHH-------------------TTCSEEEECCSCHHHHHHHHHHHHHTTCEEEEESCTTCT------TCSEEEESSCHHH
33847 T ss_pred HHH-------------------CCCCEEEECCCCccchHHHHHHHHHCCCEEEEeCCCCCC------ccceeEeeeChHH
33848 Confidence 332 467877753 33333334455566789999987654321 2345556666666
33849
33850
33851 Q NP_000836.2 202 QAQAMVDIVTA-LGW-NYVSTLAS--EGNYGESGVEAFTQISREIG-GVCIAQSQKIPREPRPGEFEKIIKRLLET-PNA 275 (908)
33852 Q Consensus 202 ~~~~~~~~l~~-~~~-~~v~ii~~--~~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 275 (908)
33853 .+..+++++.+ .+. ++++++.. ++.++..+.++|++.+++.+ ++++.... .....+..+....+++++.. .++
33854 T Consensus 112 ~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 190 (303)
33855 T 3D02_A 112 FAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKEHYPDMHEVTRR-MPVAESVDDSRRTTLDLMKTYPDL 190 (303)
33856 T ss_dssp HHHHHHHHHHHHTTTCEEEEEECSCSSCHHHHHHHHHHHHHHHHHCTTEEESSSC-BSCTTCHHHHHHHHHHHHHHCTTE
33857 T ss_pred HHHHHHHHHHHHhCCCeeEEEEECCCCChhHHHHHHHHHHHHHHHCCCceEeecc-CCCCCCHHHHHHHHHHHHHHCCCc
33858 Confidence 67777777654 366 68998875 33455667778877776531 23332211 01001112333445555421 245
33859
33860
33861 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
33862 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
33863 ++|++.. +..+..+++++++.|...++.+++.
33864 T Consensus 191 ~~i~~~~-~~~a~~~~~a~~~~g~~~~~~v~~~ 222 (303)
33865 T 3D02_A 191 KAVVSFG-SNGPIGAGRAVKEKRAKNKVAVYGM 222 (303)
33866 T ss_dssp EEEEESS-TTHHHHHHHHHHHTTCTTTCEEEEC
33867 T ss_pred cEEEEeC-CCchHHHHHHHHHhccCCCeEEEEe
33868 Confidence 6665543 4455668888888776323444443
33869
33870
33871 No 220
33872 >4WZZ_A ABC TRANSPORTER SOLUTE BINDING PROTEIN; ABC TRANSPORTER SOLUTE BINDING PROTEIN; HET: RAM, EDO, MSE; 1.7A {Clostridium phytofermentans}
33873 Probab=97.13 E-value=7.2e-07 Score=93.23 Aligned_cols=215 Identities=11% Similarity=0.034 Sum_probs=119.6 Template_Neff=11.000
33874
33875 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTC-SRDTYALEQSLTF 119 (908)
33876 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~-~~~~~a~~~~~~~ 119 (908)
33877 ...++++||++.|..+. .++..+..+++.++++.+ + ++.+.+.. .+. +...+.
33878 T Consensus 50 ~~~~~~~Ig~v~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~l~~~~~~~~~~----~~~~~~ 103 (371)
33879 T 4WZZ_A 50 GYATTATYAIIVKSAGN------------PYNQKESEGYKQVIEANG--------G--KCVIQEPKSATA----EDQITC 103 (371)
33880 T ss_dssp -CCCCCEEEEECSCSSC------------HHHHHHHHHHHHHHHHTT--------C--EEEEECCSSSSH----HHHHHH
33881 T ss_pred CCCCCcEEEEEEcCCCC------------HHHHHHHHHHHHHHHHcC--------C--EEEEECCCCCCH----HHHHHH
33882 Confidence 35678999999987542 255677788888887752 3 33344433 232 233344
33883
33884
33885 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGA-AASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
33886 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~-~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
33887 +++++. +++|++|+. ..+.........+...++|+|..+...+. ..++.+....+
33888 T Consensus 104 ~~~li~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~v~~~~ 159 (371)
33889 T 4WZZ_A 104 INNAIS-------------------QGVDCIAIAANDTDALEPALTEAKNQGIHVLSLDSATNA-----NSRKVFVNQAG 159 (371)
33890 T ss_dssp HHHHHH-------------------HTCSEEEECCSSSSTTHHHHHHHHHTTCEEEEESSCCCG-----GGCSCEEESSC
33891 T ss_pred HHHHHH-------------------cCCCEEEEcCCCHHhHHHHHHHHHHCCCEEEEECCCCCc-----cccceEEeccC
33892 Confidence 444432 478888764 33333334455667789999987764432 12233444334
33893
33894
33895 Q NP_000836.2 199 DSYQAQAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREI--GGVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
33896 Q Consensus 199 ~~~~~~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~--~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
33897 ....++.+++++.+. +.++++++.. ++.+...+.++|++.+++. .++++....... .+..+....++++++.
33898 T Consensus 160 ~~~~~~~~~~~l~~~~~g~~~v~~l~~~~~~~~~~~r~~g~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~l~~ 237 (371)
33899 T 4WZZ_A 160 TTQIAQALMDAILDISGGSGDWAVLSAASTATNQNAWIDGMKTVMQDSKYSKLNLIGVYYGD--DEYQASCDQTEAILAA 237 (371)
33900 T ss_dssp HHHHHHHHHHHHHHHTTSCEEEEEEESCTTCHHHHHHHHHHHHHTTSGGGTTEEEEEEEECT--TCHHHHHHHHHHHHHH
33901 T ss_pred HHHHHHHHHHHHHHHhCCCeeEEEEECCCCcHhHHHHHHHHHHHHhhccCCCcEEEEEecCC--CCHHHHHHHHHHHHHH
33902 Confidence 555677777777553 5678998873 3445667778888877642 124433221111 1122344455555431
33903
33904
33905 Q NP_000836.2 273 -PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
33906 Q Consensus 273 -~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
33907 .+.++|+.. ++..+..+++++++.|+..++.+++.
33908 T Consensus 238 ~~~~~~i~~~-~~~~a~~~~~al~~~g~~~~v~v~~~ 273 (371)
33909 T 4WZZ_A 238 DPNIKVICAP-TTVGIMAAAKVLQDKGLSGKVKLTGL 273 (371)
33910 T ss_dssp CTTCCEEEEC-SHHHHHHHHHHHHHTTCTTTSEEEEB
33911 T ss_pred CCCCCEEEeC-CchHHHHHHHHHHHCCCCCCeEEEec
33912 Confidence 234555443 34456677888888776323444443
33913
33914
33915 No 221
33916 >1JX6_A LUXP PROTEIN; PROTEIN-LIGAND COMPLEX, SIGNALING PROTEIN; HET: AI2; 1.5A {Vibrio harveyi} SCOP: c.93.1.1
33917 Probab=97.13 E-value=7.2e-07 Score=91.91 Aligned_cols=222 Identities=11% Similarity=0.029 Sum_probs=124.3 Template_Neff=11.600
33918
33919 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
33920 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
33921 ..+.++||++.|..+.. .+......+++.++++.+. .+.+++.+.|+..++. ...+.++
33922 T Consensus 40 ~~~~~~Igvv~~~~~~~-----------~~~~~~~~g~~~~~~~~g~------~~~~~~~~~d~~~~~~----~~~~~~~ 98 (342)
33923 T 1JX6_A 40 TQRPIKISVVYPGQQVS-----------DYWVRNIASFEKRLYKLNI------NYQLNQVFTRPNADIK----QQSLSLM 98 (342)
33924 T ss_dssp CSSCEEEEEEECCCSSC-----------CHHHHHHHHHHHHHHHTTC------CEEEEEEECCTTCCHH----HHHHHHH
33925 T ss_pred CCCCEEEEEEecCCCCC-----------HHHHHHHHHHHHHHHHcCC------eEEEEEEecCCCCCHH----HHHHHHH
33926 Confidence 56789999999975321 1334778888888887642 1223334556544422 2333444
33927
33928
33929 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRL-FKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
33930 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~-~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
33931 +++. ++++++|+...+.........+.. .++|+|..+...+.... ...++++++.+++.
33932 T Consensus 99 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~~-~~~~~~~~v~~d~~ 158 (342)
33933 T 1JX6_A 99 EALK-------------------SKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNITTPVREW-DKHQPFLYVGFDHA 158 (342)
33934 T ss_dssp HHHH-------------------TTCSEEEECCSSSTTHHHHHHHHHHCSCEEEEETCCSCBGGG-TTSCCSEEEECCHH
33935 T ss_pred HHHh-------------------cCCCEEEEeCCchHHHHHHHHHHHhCCCeEEEEeCCCCcchh-cCCCCeEEEEcChH
33936 Confidence 4432 478888876533332333444443 78999987654432111 01356777888887
33937
33938
33939 Q NP_000836.2 201 YQAQAMVDIVTALGWN--YVSTLASE-GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNAR 276 (908)
33940 Q Consensus 201 ~~~~~~~~~l~~~~~~--~v~ii~~~-~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 276 (908)
33941 ..+..+++++.+.+.+ +++++... +.++..+.+++++.+++.+++++....... .+..+....+++++.. .+++
33942 T Consensus 159 ~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 236 (342)
33943 T 1JX6_A 159 EGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTK--ATKQSGYDAAKASLAKHPDVD 236 (342)
33944 T ss_dssp HHHHHHHHHHHHHSCTTCEEEEECCSTTHHCCCCCCHHHHHHHHHHCCEEEEEECCC--SSHHHHHHHHHHHHHHCCCCS
33945 T ss_pred HHHHHHHHHHHHhcCCCCeEEEEEecCCcchHHHHHHHHHHHHhcCCceEEeeeccC--CCHHHHHHHHHHHHHHCCCCC
33946 Confidence 7888888887654443 48888754 445667777888877653223332211111 1122344455555421 2455
33947
33948
33949 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
33950 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
33951 +|+.. ++..+..+++++++.|. .++.+++.
33952 T Consensus 237 ~i~~~-~~~~a~~~~~~~~~~g~-~~~~v~~~ 266 (342)
33953 T 1JX6_A 237 FIYAC-STDVALGAVDALAELGR-EDIMINGW 266 (342)
33954 T ss_dssp EEEES-SHHHHHHHHHHHHHHTC-TTSEEBCS
33955 T ss_pred EEEEC-CHHHHHHHHHHHHHcCC-CCcEEEee
33956 Confidence 55554 34455667888887776 23344443
33957
33958
33959 No 222
33960 >4WT7_A ABC TRANSPORTER SOLUTE BINDING PROTEIN; Enzyme Function Initiative, EFI, Structural; HET: X9X; 2.0A {Agrobacterium vitis S4}
33961 Probab=97.12 E-value=7.7e-07 Score=90.79 Aligned_cols=202 Identities=10% Similarity=-0.005 Sum_probs=116.3 Template_Neff=11.400
33962
33963 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
33964 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
33965 ..++++||++.|.++. .+......+++.++++. .+++.+.|+..++. ...+.++
33966 T Consensus 29 ~~~~~~Ig~v~~~~~~------------~~~~~~~~~~~~a~~~~----------~~~l~~~~~~~~~~----~~~~~~~ 82 (321)
33967 T 4WT7_A 29 SLKGKRIGISTAGTDH------------FFDLQAYNAQIAEVKRL----------GGEPLAVDAGRSDG----KLVAQLQ 82 (321)
33968 T ss_dssp CCTTCEEEEEESCCSS------------HHHHHHHHHHHHHHHHT----------TCEEEEEECTTCHH----HHHHHHH
33969 T ss_pred hcCCcEEEEEcCCCCc------------HHHHHHHHHHHHHHHHc----------CCeEEEEeCCCCHH----HHHHHHH
33970 Confidence 4478999999997532 12334556666666543 24455556544322 2333444
33971
33972
33973 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAA-ASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
33974 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~-~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
33975 +++. ++++++|... .+.........+.+.++|+|..+...+ ++++++.+++.
33976 T Consensus 83 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~--------~~~~~v~~d~~ 135 (321)
33977 T 4WT7_A 83 TLIA-------------------QKPDAIVQLLGTLTVIDPWLKRARDAGIPVLTIDVGSS--------HSLNNSTSDNW 135 (321)
33978 T ss_dssp HHHH-------------------HCCSEEEEECCCHHHHHHHHHHHHHTTCCEEEESCCCT--------TCSCEEECCHH
33979 T ss_pred HHHH-------------------CCCCEEEEcCCChhhhHHHHHHHHHcCCCEEEECCCCC--------CcceeecCChH
33980 Confidence 4332 4677766543 333333445566778999998765432 34667777777
33981
33982
33983 Q NP_000836.2 201 YQAQAMVDIVTA--LGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQ--KIPREPRPGEFEKIIKRLLETPN 274 (908)
33984 Q Consensus 201 ~~~~~~~~~l~~--~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~--~~~~~~~~~~~~~~~~~l~~~~~ 274 (908)
33985 ..++.+++++.+ .+.++++++.. +..++..+.++|++.+++.+++++.... ... ..+..+....++++++ .+
33986 T Consensus 136 ~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~ 213 (321)
33987 T 4WT7_A 136 GIGKDLALQLVSDIGGEGNVVVFNGFYGVTPCAIRYDQLVNVIKYFPKVKIIQPELRDVI-PNTVQDAFAQVTAILN-KY 213 (321)
33988 T ss_dssp HHHHHHHHHHHHHTTTCEEEEEECCCTTSHHHHHHHHHHHHHHTTSTTEEECSSCBCCCS-SSHHHHHHHHHHHHHH-HS
33989 T ss_pred HHHHHHHHHHHHHhCCCceEEEEEcCCCCCcHHHHHHHHHHHHHHCCCcEEEcccccCCC-CCCHHHHHHHHHHHHH-HC
33990 Confidence 777777777755 47788999985 4456667788888877653213332210 010 0112234445555553 23
33991
33992
33993 Q NP_000836.2 275 -----ARAVIMFANEDDIRRILEAAKKLNQ 299 (908)
33994 Q Consensus 275 -----~~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
33995 +++|++.. +..+..+++++++.|.
33996 T Consensus 214 ~~~~~~~~i~~~~-~~~a~~~~~~l~~~g~ 242 (321)
33997 T 4WT7_A 214 PEKGSIKAIWSAW-DIPQLGATQALAAAGR 242 (321)
33998 T ss_dssp CSTTSCCEEEESS-HHHHHHHHHHHHHHTC
33999 T ss_pred CCcCCccEEEeCC-ChhHHHHHHHHHHCCC
34000 Confidence 56666553 4556678888887776
34001
34002
34003 No 223
34004 >2RJO_A Twin-arginine translocation pathway signal protein; PSI-2, NYSGXRC, twin arginine translocation; HET: SO4, GAL; 2.05A {Burkholderia phytofirmans}
34005 Probab=97.09 E-value=8.7e-07 Score=90.86 Aligned_cols=217 Identities=10% Similarity=0.034 Sum_probs=119.1 Template_Neff=11.400
34006
34007 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
34008 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
34009 +++++||++.|..+. .++..+..+++.++++.| +++.+.|+..++. ...+.+++
34010 T Consensus 3 ~~~~~Igvv~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~~ 56 (332)
34011 T 2RJO_A 3 LGQTTLACSFRSLTN------------PYYTAFNKGAQSFAKSVG----------LPYVPLTTEGSSE----KGIADIRA 56 (332)
34012 T ss_dssp CCCCEEEEEESCTTS------------HHHHHHHHHHHHHHHHHT----------CCEEEEECTTCHH----HHHHHHHH
34013 T ss_pred CCccEEEEEEcCCCC------------HHHHHHHHHHHHHHHHcC----------CCEEEeeCCCCHH----HHHHHHHH
34014 Confidence 467899999997542 255677788888887753 3344455443322 22333443
34015
34016
34017 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIG---AAASSVSIMVANILRLFKIPQISYASTAPELSDN-TRYDFFSRVVPP 198 (908)
34018 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg---~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~-~~~~~~~~~~~~ 198 (908)
34019 ++. +++++++. +..+.........+...++|+|..+...+..... ...++++++..+
34020 T Consensus 57 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~~~~~~~~~~~~v~~d 117 (332)
34021 T 2RJO_A 57 LLQ-------------------KTGGNLVLNVDPNDSADARVIVEACSKAGAYVTTIWNKPKDLHPWDYNPNYVAHLSYD 117 (332)
34022 T ss_dssp HHH-------------------HTTTCEEEEECCSSHHHHHHHHHHHHHHTCEEEEESCCCTTCCGGGGTTTEEEEEECC
34023 T ss_pred HHh-------------------cCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEEcCCCCCCCcccCCCCceEEEecC
34024 Confidence 332 34565553 3222222334455667899999876544321100 012456677777
34025
34026
34027 Q NP_000836.2 199 DSYQAQAMVDIVT-ALGWN-YVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-- 272 (908)
34028 Q Consensus 199 ~~~~~~~~~~~l~-~~~~~-~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-- 272 (908)
34029 +...+..+++++. +.+.+ +++++.. +...+..+.++|++.+++..++.+....... .+..+....++++++.
34030 T Consensus 118 ~~~~~~~~~~~l~~~~g~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~ 195 (332)
34031 T 2RJO_A 118 GVAYGEETATQLFKSMGGKGGVVALGGIFSNVPAIERKAGLDAALKKFPGIQLLDFQVAD--WNSQKAFPIMQAWMTRFN 195 (332)
34032 T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCTTCHHHHHHHHHHHHHHHTCTTEEEEEEEECT--TCHHHHHHHHHHHHHHHG
34033 T ss_pred hHHHHHHHHHHHHHHcCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHhCCCcEEeeeEeCC--CCHHHHHHHHHHHHHHcc
34034 Confidence 7666777777764 45665 8998853 3345666777888877653124443211111 1112233445555421
34035
34036
34037 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIG 307 (908)
34038 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~ 307 (908)
34039 .++++|++.. +..+..+++++++.|+..++.+++
34040 T Consensus 196 ~~~d~i~~~~-~~~a~~~~~a~~~~g~~~~~~i~~ 229 (332)
34041 T 2RJO_A 196 SKIKGVWAAN-DDMALGAIEALRAEGLAGQIPVTG 229 (332)
34042 T ss_dssp GGEEEEEESS-HHHHHHHHHHHHHTTCBTTBCEEC
34043 T ss_pred CccCEEEECC-HHHHHHHHHHHHHCCCCCCCCEEc
34044 Confidence 2567776654 445567778888777632333333
34045
34046
34047 No 224
34048 >4Y9T_A ABC TRANSPORTER SOLUTE BINDING PROTEIN; ABC TRANSPORTER SOLUTE BINDING PROTEIN; HET: MSE, PA1; 1.801A {Agrobacterium vitis}
34049 Probab=97.09 E-value=8.9e-07 Score=91.44 Aligned_cols=205 Identities=12% Similarity=0.072 Sum_probs=115.5 Template_Neff=11.000
34050
34051 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
34052 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
34053 ..+.++||++.|..+. .++..+..+++.++++.| +++.+.|...+.. ...+.++
34054 T Consensus 24 ~~~~~~Igvi~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~l~~~~~~~~~~----~~~~~~~ 77 (346)
34055 T 4Y9T_A 24 AQTKGMVYYLVPTLLD------------EFQTGSVNALSMFLGQVG----------YEMKTLNADNKTD----AQQSQMN 77 (346)
34056 T ss_dssp --CCCEEEEEESCCCS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCHH----HHHHHHH
34057 T ss_pred cCCCCEEEEEccCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEEeCCCCHH----HHHHHHH
34058 Confidence 3478999999987642 255677788888777653 3444555443322 2333344
34059
34060
34061 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASS-VSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
34062 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~-~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
34063 +++. +++|++|+...+. ........+...++|+|..+...+. .++.+++.++..
34064 T Consensus 78 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~ 132 (346)
34065 T 4Y9T_A 78 DVIA-------------------LKPAAIILAAVDFNALKPSIEAARAAGIPVVEFDRQITS------TPSDFTSVAGTV 132 (346)
34066 T ss_dssp HHHH-------------------HCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCCS------SCCSEEEEECHH
34067 T ss_pred HHHh-------------------cCCCEEEEcCCCccchHHHHHHHHHCCCCEEEeCCCCCC------CCCceEEEeChH
34068 Confidence 4332 4678777644332 2224445566789999987764331 134556666666
34069
34070
34071 Q NP_000836.2 201 YQAQAMVDIVTALGW-------NYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE 271 (908)
34072 Q Consensus 201 ~~~~~~~~~l~~~~~-------~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~ 271 (908)
34073 ..++.+++++.+.+. ++++++.. +..++..+.++|++.+++..++.+....... .+..+....++++++
34074 T Consensus 133 ~~~~~~~~~l~~~~~~~~~~~~~~i~~i~~~~~~~~~~~r~~g~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~ 210 (346)
34075 T 4Y9T_A 133 EIGHIAGDHAISLLKGKNGDVKGKILQVPGDPGDPYTLDIQKGFEEKIKAFPGVKIISVPAVQ--WEASAAGTIVSDQML 210 (346)
34076 T ss_dssp HHHHHHHHHHHHHHBCTTSCBCEEEEEECCCTTCHHHHHHHHHHHHHHHTCTTEEEEECCCGG--GCHHHHHHHHHHHHH
34077 T ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEEEecCCCCHHHHHHHHHHHHHHHhCCCcEEEEecCCC--CCHHHHHHHHHHHHH
34078 Confidence 667777777754333 78888875 3445667778888877653124433221111 111234445555542
34079
34080
34081 Q NP_000836.2 272 T-PNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
34082 Q Consensus 272 ~-~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
34083 . .++++|+.. .+..+..+++++++.|+.
34084 T Consensus 211 ~~~~~~~i~~~-~~~~a~~~~~al~~~g~~ 239 (346)
34085 T 4Y9T_A 211 ANPDIDLIFLH-AAHLSVAAVASLEAAGKK 239 (346)
34086 T ss_dssp HCTTCCEEEES-SHHHHHHHHHHHHHTTCC
34087 T ss_pred HCCCCCEEEEC-ChHHHHHHHHHHHHcCCC
34088 Confidence 1 245555544 344556677888877763
34089
34090
34091 No 225
34092 >4RU1_A Monosaccharide ABC transporter substrate-binding protein; SUGAR TRANSPORTER, ABC-TYPE, ENZYME FUNCTION; HET: INS, CIT; 1.5A {Acidothermus cellulolyticus}
34093 Probab=97.08 E-value=9.1e-07 Score=89.26 Aligned_cols=206 Identities=13% Similarity=0.059 Sum_probs=120.0 Template_Neff=11.900
34094
34095 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
34096 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
34097 .....++++||++.|.++.. .....+..+++.++++.+ +++.+. + ..++ +...+
34098 T Consensus 14 ~~~~~~~~~Ig~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g--------~~~~~~--~-~~~~----~~~~~ 67 (304)
34099 T 4RU1_A 14 GKANTPHLTIAMITHQQPGD-----------TFWDIIRKGALAAAAKDN--------VTLKYS--N-DPDS----TKEAV 67 (304)
34100 T ss_dssp ---CCCCEEEEEEECCCTTC-----------THHHHHHHHHHHHHHHTT--------EEEEEE--E-CSSH----HHHHH
34101 T ss_pred cCCCCCCeEEEEEeCCCCCC-----------hHHHHHHHHHHHHHHHcC--------CEEEEe--C-CCCc----HHHHH
34102 Confidence 34567889999999974321 234567778888887753 333332 3 2222 22233
34103
34104
34105 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIG-AAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
34106 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg-~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
34107 .+++++. ++++++|+ +..+.........+...++|+|..+...+.. ...++++++.+
34108 T Consensus 68 ~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~---~~~~~~~~v~~ 125 (304)
34109 T 4RU1_A 68 LIQDAVN-------------------AKVDGIAVTIPDPPALIPAIKQAVAAGIPVVAFNAGIDQW---KESGALMYFGQ 125 (304)
34110 T ss_dssp HHHHHHH-------------------TTCSEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCTTTH---HHHTCSEEEEC
34111 T ss_pred HHHHHHH-------------------cCCCEEEEcCCChHhhHHHHHHHHHCCCCEEEEeCCCccc---cccCCceEEec
34112 Confidence 3444432 47888887 4333333344456677899999877644321 11345677778
34113
34114
34115 Q NP_000836.2 198 PDSYQAQAMVDIVTALGWNYVSTLA--SEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PN 274 (908)
34116 Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~v~ii~--~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 274 (908)
34117 ++...+..+++++.+.+.++++++. .++.++..+.+++++.+++. +..+... . .+..+....++++++. .+
34118 T Consensus 126 d~~~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~--~~~~~~~~~~~~~l~~~~~ 199 (304)
34119 T 4RU1_A 126 DETVAGQAAGARATSEGFKHVLCVLQAQGQVQLESRCNGVQQTFKGQ-YTKLYVN---G--ADQPSVRTTIAAKLKQDPS 199 (304)
34120 T ss_dssp CHHHHHHHHHHHHHHTTCCEEEEEESSSSCHHHHHHHHHHHHHCCSE-EEEEECC---T--TCHHHHHHHHHHHHHHCTT
34121 T ss_pred CHHHHHHHHHHHHHHcCCceEEEEEcCCCcHHHHHHHHHHHHHHhcC-cceEEEc---C--CChHHHHHHHHHHHhhCCC
34122 Confidence 8777788888888777888999994 33445667777888877764 2333211 1 1112334445555431 23
34123
34124
34125 Q NP_000836.2 275 ARAVIMFANEDDIRRILEAAKKLNQ 299 (908)
34126 Q Consensus 275 ~~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
34127 +++|++. ++..+..+++++++.|+
34128 T Consensus 200 ~~~i~~~-~~~~~~~~~~~~~~~g~ 223 (304)
34129 T 4RU1_A 200 IDLVITL-GAPIAQLAIQAVKDAGS 223 (304)
34130 T ss_dssp CCEEEES-SHHHHHHHHHHHHHTTC
34131 T ss_pred CCEEEEC-ChhHHHHHHHHHHHcCC
34132 Confidence 6777644 34456677888887776
34133
34134
34135 No 226
34136 >4YV7_A ABC TRANSPORTER SOLUTE BINDING PROTEIN; ABC TRANSPORTER SOLUTE BINDING PROTEIN; HET: MSE; 2.3A {Mycobacterium smegmatis}
34137 Probab=97.08 E-value=9.4e-07 Score=90.21 Aligned_cols=215 Identities=13% Similarity=0.046 Sum_probs=114.6 Template_Neff=11.900
34138
34139 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
34140 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
34141 ....++.++||++.|..+. ..+.....+++.++++.+ +++.+.|+..++. ...+
34142 T Consensus 34 ~~~~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~l~~~~~~~~~~----~~~~ 87 (326)
34143 T 4YV7_A 34 APVVDGALKIGFSQATQQS------------PFYVALTDAAKAEAQAQG----------DELFYADANGDIT----KQNN 87 (326)
34144 T ss_dssp -----CCCEEEEEESCCSS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCHH----HHHH
34145 T ss_pred CCccCCCcEEEEEeCCCCC------------HHHHHHHHHHHHHHHHcC----------CEEEEEcCCCCHH----HHHH
34146 Confidence 3456778999999997542 245667788888887753 3444555543322 2233
34147
34148
34149 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
34150 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
34151 .+++++. ++++++++...+... ......+...++|+|..+...+ .++.+.+.+
34152 T Consensus 88 ~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~-------~~~~~~v~~ 141 (326)
34153 T 4YV7_A 88 DVQDLIT-------------------RGINVLVINPVDPKGVTPSLAAAEAAGIKVVTVDRPVE-------SGAASFVGR 141 (326)
34154 T ss_dssp HHHHHHH-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCEEEEESSCCS-------SCCSEEEEC
34155 T ss_pred HHHHHHH-------------------cCCCEEEEcCCCccccHHHHHHHHHCCCeEEEeCCCCC-------CCcceEEec
34156 Confidence 3443332 478877765443322 2344556678999998765432 134556666
34157
34158
34159 Q NP_000836.2 198 PDSYQAQAMVDIVT----ALGWNYVSTLAS-EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE- 271 (908)
34160 Q Consensus 198 ~~~~~~~~~~~~l~----~~~~~~v~ii~~-~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~- 271 (908)
34161 ++...++.+++++. +.+.+.+.++.. ++.++..+.+++++.+++.+++.+....... .+..+....++++++
34162 T Consensus 142 d~~~~~~~~~~~~~~~l~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 219 (326)
34163 T 4YV7_A 142 DNKAMGELVGKAAVDTLGPDGGKIIEIQGDAGGAVARDRRDGFQAAVSGRPNITIVEGPYCD--YIRSKAVTAMQDLLQA 219 (326)
34164 T ss_dssp CHHHHHHHHHHHHHHHHGGGCEEEEEEECCTTCHHHHHHHHHHHHHHTTCTTEEEEEEEECT--TCHHHHHHHHHHHHHH
34165 T ss_pred CHHHHHHHHHHHHHHHHCCCCcEEEEEEcCCCCHHHHHHHHHHHHHHhcCCCeEEeeccccc--CcHHHHHHHHHHHHHH
34166 Confidence 66655655444432 234444444432 3456667778888877664124433211111 111223344555542
34167
34168
34169 Q NP_000836.2 272 TPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSD 309 (908)
34170 Q Consensus 272 ~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~ 309 (908)
34171 ..++|+|++.. +..+..+++++++.|.. ++.+++.+
34172 T Consensus 220 ~~~~~~i~~~~-~~~a~~~~~~l~~~g~~-~~~i~~~~ 255 (326)
34173 T 4YV7_A 220 HPDLKGVYAQN-DDMALGAMQVLAENNRT-DVKVFGVD 255 (326)
34174 T ss_dssp CTTEEEEEESS-HHHHHHHHHHHHHTTCT-TSEEECSB
34175 T ss_pred CCCCcEEEeCC-hHHHHHHHHHHHHCCCC-CcEEEEec
34176 Confidence 13677776654 44456677888877762 34444443
34177
34178
34179 No 227
34180 >2FN9_B ribose ABC transporter, periplasmic ribose-binding; RBP, ribose binding protein, periplasmic; 1.4A {Thermotoga maritima}
34181 Probab=97.06 E-value=1e-06 Score=88.25 Aligned_cols=202 Identities=10% Similarity=0.046 Sum_probs=110.6 Template_Neff=11.700
34182
34183 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
34184 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
34185 +++||++.|..+. .++.....+++.++++.| +++.+.++..+. +...+.+++++
34186 T Consensus 2 ~~~Ig~v~~~~~~------------~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~~~~ 55 (290)
34187 T 2FN9_B 2 KGKMAIVISTLNN------------PWFVVLAETAKQRAEQLG----------YEATIFDSQNDT----AKESAHFDAII 55 (290)
34188 T ss_dssp -CEEEEEESCSSS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHHHHHH
34189 T ss_pred CceEEEEeCCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEEcCCCCH----HHHHHHHHHHH
34190 Confidence 5689999987542 255677788888887653 233444443332 12233334333
34191
34192
34193 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
34194 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
34195 . .+++++|....+... ......+...++|+|..+...+. ..++.+++..++...+
34196 T Consensus 56 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~~v~~d~~~~~ 111 (290)
34197 T 2FN9_B 56 A-------------------AGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRGINA-----RGLAVAQIYSDNYYGG 111 (290)
34198 T ss_dssp H-------------------HTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEESSCCSC-----SSSSSEEEEECHHHHH
34199 T ss_pred H-------------------cCCCEEEEcCCCCcccHHHHHHHHHCCCCEEEECCCCCC-----CCCceEEEEeCchHHH
34200 Confidence 2 477877765433322 13344566789999987764431 1234566677776677
34201
34202
34203 Q NP_000836.2 204 QAMVDIVTALG------WNYVSTLA----SEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-T 272 (908)
34204 Q Consensus 204 ~~~~~~l~~~~------~~~v~ii~----~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~ 272 (908)
34205 +.+++++.+.+ .++++++. .+..+...+.+++++.+++.+...+....... .+..+....+++++. .
34206 T Consensus 112 ~~~~~~l~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~ 189 (290)
34207 T 2FN9_B 112 VLAGEYFVKFLKEKYPDAKEIPYAELLGILSAQPTWDRSNGFHSVVDQYPEFKMVAQQSAE--FDRDTAYKVTEQILQAH 189 (290)
34208 T ss_dssp HHHHHHHHHHHHHHSTTCSCEEEEEEECCTTCHHHHHHHHHHHHHHTTSTTEEEEEEEECT--TCHHHHHHHHHHHHHHC
34209 T ss_pred HHHHHHHHHHHHHHCCCccccCEEEEEeeCCCchHHHHHHHHHHHHHhCCCcEEeeeecCC--CCHHHHHHHHHHHHHHC
34210 Confidence 77777765433 26777633 23344556777777777654212222111111 111223344455542 1
34211
34212
34213 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQ 299 (908)
34214 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
34215 .++|+|++. ++..+..+++++++.|+
34216 T Consensus 190 ~~~d~i~~~-~~~~a~~~~~~l~~~g~ 215 (290)
34217 T 2FN9_B 190 PEIKAIWCG-NDAMALGAMKACEAAGR 215 (290)
34218 T ss_dssp TTCCEEEES-SHHHHHHHHHHHHHHTC
34219 T ss_pred CCCCEEEEC-ChHHHHHHHHHHHHcCC
34220 Confidence 367888766 35556778888877776
34221
34222
34223 No 228
34224 >4XXH_B PROTEIN (TREHALOSE OPERON REPRESSOR); LACI FAMILY, PHOSPHATE BINDING, PROTEIN; HET: T6P; 2.4A {Escherichia coli K-12}
34225 Probab=97.06 E-value=1e-06 Score=86.09 Aligned_cols=192 Identities=11% Similarity=0.087 Sum_probs=114.8 Template_Neff=12.100
34226
34227 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
34228 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
34229 +++||++.|..+. .++.....+++.++++.+ + ++.+.++..++. ...+.++++.
34230 T Consensus 2 ~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~~----~~~~~~~~~~ 55 (255)
34231 T 4XXH_B 2 DKVVAIIVTRLDS------------LSENLAVQTMLPAFYEQG--------Y--DPIMMESQFSPQ----LVAEHLGVLK 55 (255)
34232 T ss_dssp CCEEEEEESCTTC------------HHHHHHHHHHHHHHHHHT--------C--EEEEEECTTCHH----HHHHHHHHHH
34233 T ss_pred CeEEEEEECCCCC------------hhHHHHHHHHHHHHHHcC--------C--EEEEEeCCCCHH----HHHHHHHHHH
34234 Confidence 5789999987542 255667778887777642 2 334444433321 2223333333
34235
34236
34237 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQ 204 (908)
34238 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (908)
34239 . .++|++|+...+... ...+...++|+|..+... +.++++.+++...++
34240 T Consensus 56 ~-------------------~~~d~ii~~~~~~~~---~~~~~~~~ip~v~~~~~~---------~~~~~v~~~~~~~~~ 104 (255)
34241 T 4XXH_B 56 R-------------------RNIDGVVLFGFTGIT---EEMLAHWQSSLVLLARDA---------KGFASVCYDDEGAIK 104 (255)
34242 T ss_dssp H-------------------TTCSEEEEECCTTCC---TGGGGGGTTSEEEESSCC---------TTSEEEEECHHHHHH
34243 T ss_pred h-------------------CCCCEEEEecCCCCc---HHHHHhcCCeEEEECCCC---------CCCCEEEeCHHHHHH
34244 Confidence 2 478888875544332 234566799988765422 245667777777788
34245
34246
34247 Q NP_000836.2 205 AMVDIVTALGWNYVSTLASEGN---YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMF 281 (908)
34248 Q Consensus 205 ~~~~~l~~~~~~~v~ii~~~~~---~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~ 281 (908)
34249 .+++++.+.+.++++++..+.. ++..+.+++++.+++. ++.+... ... .+..+....+++++. .++|+|++.
34250 T Consensus 105 ~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--~~~~~~~~~~~~~~~-~~~dai~~~ 179 (255)
34251 T 4XXH_B 105 ILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAH-KLHPVAA-LPG--LAMKQGYENVAKVIT-PETTALLCA 179 (255)
34252 T ss_dssp HHHHHHHHTTCCCEEEECCCTTSCCCCCCHHHHHHHHHHHT-TCCCCEE-CCC--SCHHHHHHHGGGGCC-TTCCEEEES
34253 T ss_pred HHHHHHHHCCCCcEEEEeCChhccccHHHHHHHHHHHHHHC-CCCCcee-cCC--CcchhHHHHHHHHhC-CCCCEEEEe
34254 Confidence 8888887678889999985433 4667778888887764 3433211 111 111123334555553 578888776
34255
34256
34257 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQ 299 (908)
34258 Q Consensus 282 ~~~~~~~~~l~~~~~~g~ 299 (908)
34259 . +..+..+++++++.|+
34260 T Consensus 180 ~-~~~a~~~~~~~~~~g~ 196 (255)
34261 T 4XXH_B 180 T-DTLALGASKYLQEQRI 196 (255)
34262 T ss_dssp S-HHHHHHHHHHHHHTTC
34263 T ss_pred c-HHHHHHHHHHHHHCCC
34264 Confidence 4 4456677888877776
34265
34266
34267 No 229
34268 >5IX8_B Putative sugar ABC transport system; Structural Genomics, Midwest Center for; HET: EDO, SO4, MSE; 1.6A {Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)}
34269 Probab=97.04 E-value=1.1e-06 Score=89.41 Aligned_cols=208 Identities=14% Similarity=0.032 Sum_probs=120.9 Template_Neff=11.700
34270
34271 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVR-ILDTCSRDTYALEQSLT 118 (908)
34272 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~-~~d~~~~~~~a~~~~~~ 118 (908)
34273 ....+.++||++.|..+. .++.....+++.++++.+ +++.+. ..|+..+. ....+
34274 T Consensus 10 ~~~~~~~~Ig~v~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~~~~~~----~~~~~ 65 (321)
34275 T 5IX8_B 10 IVARQPLKLGVTVVHLLD------------NFYKGIAYGIVDEARRSN--------VEVVQVAVAGAYGNV----QQQFA 65 (321)
34276 T ss_dssp CCCCSCCEEEEEESCSSS------------SHHHHHHHHHHHHHHHHT--------CEEEEEEECSSTTCH----HHHHH
34277 T ss_pred cccCCCcEEEEEECCCCC------------HHHHHHHHHHHHHHHHCC--------CEEEEEEecCCCCCH----HHHHH
34278 Confidence 345678999999987542 255677888888888763 445543 23332332 22233
34279
34280
34281 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAAS-SVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
34282 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s-~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
34283 .+++++. .+++++|..... .........+.+.++|+|..+...+. .++.+++.+
34284 T Consensus 66 ~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~ 120 (321)
34285 T 5IX8_B 66 QLQSFKT-------------------LGVDYAVLSPAAYSGYDPVVADLARSGIKTISAGIPVNS------DKIAFGVLQ 120 (321)
34286 T ss_dssp HHHHHHH-------------------TTCSEEEECCSSSSSCHHHHHHHHHTTCEEEEESSCCSC------TTCCEEEEC
34287 T ss_pred HHHHHHH-------------------cCCCEEEEcCCCccccHHHHHHHHHCCCEEEEECCCCCC------CcceEEEEc
34288 Confidence 3444332 467776654332 22234445666789999987654321 245667777
34289
34290
34291 Q NP_000836.2 198 PDSYQAQAMVDIVTALGW--NYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET- 272 (908)
34292 Q Consensus 198 ~~~~~~~~~~~~l~~~~~--~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~- 272 (908)
34293 ++...+..+++++.+.+. ++++++.. ++.++..+.+++++.+++. ++.+.... .....+..+....++++++.
34294 T Consensus 121 d~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (321)
34295 T 5IX8_B 121 DDTLIGKVLGKALCDDGAQGKQVIVVPGAAGLEWPRLRYEGFKEVASAC-GAKLTPAA-FRGEMSLADGMAQTQDLLMRT 198 (321)
34296 T ss_dssp CHHHHHHHHHHHHHHTTCTTCEEEECCCCSSSSHHHHHHHHHHHHHHHT-TCEECCCC-CCSCCCHHHHHHHHHHHHHHC
34297 T ss_pred CHHHHHHHHHHHHHHccCCCcEEEEEeCCCCCcHHHHHHHHHHHHHHhc-CCEEEeee-ecCCCCHHHHHHHHHHHHHhC
34298 Confidence 777778888888765554 48888875 4456677888888888765 34443211 11001122344445555421
34299
34300
34301 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQ 299 (908)
34302 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
34303 .++++|+... +..+..+++++++.|+
34304 T Consensus 199 ~~~~~i~~~~-~~~a~~~~~~~~~~g~ 224 (321)
34305 T 5IX8_B 199 PDAEYVFTPV-TFLGIGAVRAARQANR 224 (321)
34306 T ss_dssp TTEEEEECSS-HHHHHHHHHHHHHTTC
34307 T ss_pred CCCCEEEeCC-hHHHHHHHHHHHHcCC
34308 Confidence 2355565543 4455667888887776
34309
34310
34311 No 230
34312 >4WUT_A ABC TRANSPORTER SOLUTE BINDING PROTEIN; ABC TRANSPORTER SOLUTE BINDING PROTEIN; HET: FCB, MSE; 1.5A {Agrobacterium vitis}
34313 Probab=97.04 E-value=1.1e-06 Score=89.04 Aligned_cols=222 Identities=9% Similarity=0.031 Sum_probs=119.1 Template_Neff=11.600
34314
34315 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
34316 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
34317 ....++..+||++.|..+. .+...+..+++.++++.+. ..+.+...|...++ +...+
34318 T Consensus 17 ~l~~~~~~~I~vi~~~~~~------------~~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~----~~~~~ 73 (313)
34319 T 4WUT_A 17 NLYFQSMGEIAVIVKTVNS------------TFWQNVQKGADAAIGKQKA-------HTITFQGPAAESAI----ADQVN 73 (313)
34320 T ss_dssp -------CEEEEECSCSSC------------HHHHHHHHHHHHHHTTCSS-------CEEEEECCSSTTCH----HHHHH
34321 T ss_pred cccccCCcEEEEEECCCCC------------HHHHHHHHHHHHHHHhcCc-------eEEEEeCCcccccH----HHHHH
34322 Confidence 3456678999999987542 2456777888888877542 11223222222221 12233
34323
34324
34325 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
34326 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
34327 .+++++. +++|++|........ ......+...++|+|..+...+.. ....+++.+.+
34328 T Consensus 74 ~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~---~~~~~~~~v~~ 131 (313)
34329 T 4WUT_A 74 MVENAVN-------------------RKVDAILLAPSDPDALVPAVKKAWEARIPVVIIDSMLSKD---AEKYYQAFLAT 131 (313)
34330 T ss_dssp HHHHHHH-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCCGG---GGGGCSEEEEC
34331 T ss_pred HHHHHHh-------------------CCCCEEEECCCCHHhhHHHHHHHHHCCCCEEEEeCCCCcc---hhhheEEEEEC
34332 Confidence 3443332 478877764433222 233445667899999887644321 01134567777
34333
34334
34335 Q NP_000836.2 198 PDSYQAQAMVDIVTALGW--NYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-T 272 (908)
34336 Q Consensus 198 ~~~~~~~~~~~~l~~~~~--~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~ 272 (908)
34337 ++...++.+++++.+.+. ++++++.. +...+..+.+++++.+++.+...+....... .+..+....+++++. .
34338 T Consensus 132 d~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~ 209 (313)
34339 T 4WUT_A 132 DNKAAGELAAKAMIQKVGTEGKIAVMSYVAGAGSEIGRVGGFTDYIKANSKLQIVGPYYSQ--SQMATALNQTTDVLAAN 209 (313)
34340 T ss_dssp CHHHHHHHHHHHHHHHHCSSSEEEEEESSTTCHHHHHHHHHHHHHHHHHCCCEEEEEEECT--TCHHHHHHHHHHHHHHC
34341 T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEEEccCCChhHHHHHHHHHHHHHHcCCcEEEeccCCc--ccHHHHHHHHHHHHHHC
34342 Confidence 777778888888866555 78998875 3345556778888887765312332211111 111223333444432 1
34343
34344
34345 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
34346 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
34347 .++++|++.. +..+..+++++++.|...++.+++.
34348 T Consensus 210 ~~~~~i~~~~-~~~a~~~~~al~~~g~~~~i~i~~~ 244 (313)
34349 T 4WUT_A 210 ADLKGIFGAN-EPTAIGMGRAIKQAGKAGKLVAIGF 244 (313)
34350 T ss_dssp TTCCEEEECS-HHHHHHHHHHHHHTTCTTSSEEEEE
34351 T ss_pred CCCCEEEEcC-hhHHHHHHHHHHHcCCCCCEEEEEe
34352 Confidence 3567777664 4455677888887776323444443
34353
34354
34355 No 231
34356 >3HCW_A Maltose operon transcriptional repressor; RNA-BINDING, TRANSCRIPTIONAL REPRESSOR, PSI-2, NYSGXRC; HET: GOL; 2.2A {Staphylococcus aureus subsp. aureus Mu50}
34357 Probab=97.03 E-value=1.2e-06 Score=87.99 Aligned_cols=207 Identities=11% Similarity=0.084 Sum_probs=118.8 Template_Neff=11.800
34358
34359 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
34360 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
34361 .++..+||++.|.++.... ...+......+++.++++. |+ ++.+.+...+. +...+.++
34362 T Consensus 4 ~~~~~~I~~v~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~--------g~--~~~~~~~~~~~----~~~~~~~~ 62 (295)
34363 T 3HCW_A 4 TNQTYKIGLVLKGSEEPIR-------LNPFYINVLLGISETCNQH--------GY--GTQTTVSNNMN----DLMDEVYK 62 (295)
34364 T ss_dssp CCCSCEEEEECSCCCHHHH-------SCHHHHHHHHHHHHHHHTT--------TC--EEEECCCCSHH----HHHHHHHH
34365 T ss_pred cCCccEEEEEecCCCCccc-------cChHHHHHHHHHHHHHHHh--------CC--EEEEEecCCCc----hhHHHHHH
34366 Confidence 4578899999987431000 0124556677777776653 23 33344433321 12223333
34367
34368
34369 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
34370 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
34371 .++. .++|++|+...+.. ..+...+...++|+|..+...+. ..+.++.+.+++..
34372 T Consensus 63 ~~~~-------------------~~~d~ii~~~~~~~-~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~~v~~d~~~ 117 (295)
34373 T 3HCW_A 63 MIKQ-------------------RMVDAFILLYSKEN-DPIKQMLIDESMPFIVIGKPTSD-----IDHQFTHIDNDNIL 117 (295)
34374 T ss_dssp HHHT-------------------TCCSEEEESCCCTT-CHHHHHHHHTTCCEEEESCCCSS-----GGGGSCEEEECHHH
34375 T ss_pred HHHH-------------------cCCCEEEEeCCCCC-CHHHHHHHHCCCCEEEECCCCCc-----ccccCCEEecChHH
34376 Confidence 3332 47888887544433 34455667789999988754321 12345667777777
34377
34378
34379 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLL----ETPNA 275 (908)
34380 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~----~~~~~ 275 (908)
34381 .++.+++++.+.+.++++++..+. ..+..+.++|++.+++. ++.+... ... .+..+....+++++ ...++
34382 T Consensus 118 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~ 193 (295)
34383 T 3HCW_A 118 ASENLTRHVIEQGVDELIFITEKGNFEVSKDRIQGFETVASQF-NLDYQII-ETS--NEREVILNYMQNLHTRLKDPNIK 193 (295)
34384 T ss_dssp HHHHHHHHHHHHCCSEEEEEEESSCCHHHHHHHHHHHHHHHHT-TCEEEEE-EEC--SCHHHHHHHHHHHHHHHTCTTSC
34385 T ss_pred HHHHHHHHHHHcCCCEEEEEeCCCCChhHHHHHHHHHHHHHHC-CCCceEE-ecC--CCHHHHHHHHHHHHHHhcCCCCC
34386 Confidence 888888888767888999988543 25566778888888765 3443211 111 11122333344432 12346
34387
34388
34389 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQ 299 (908)
34390 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
34391 |+|++.. +..+..+++++++.|+
34392 T Consensus 194 d~i~~~~-~~~~~~~~~~l~~~g~ 216 (295)
34393 T 3HCW_A 194 QAIISLD-AMLHLAILSVLYELNI 216 (295)
34394 T ss_dssp EEEEESS-HHHHHHHHHHHHHTTC
34395 T ss_pred cEEEECC-HHHHHHHHHHHHHCCC
34396 Confidence 7777664 4456678888888776
34397
34398
34399 No 232
34400 >1JYE_A Lactose Operon Repressor; Gene Regulation, Protein Stability, Protein; 1.7A {Escherichia coli} SCOP: c.93.1.1
34401 Probab=97.02 E-value=1.2e-06 Score=90.41 Aligned_cols=203 Identities=13% Similarity=0.080 Sum_probs=115.3 Template_Neff=11.300
34402
34403 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
34404 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
34405 ..+.++||++.|..+. .++..+..+++.++++.+ +++.+...+. .++ +...+.++
34406 T Consensus 58 ~~~~~~Ig~v~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~-~~~----~~~~~~~~ 112 (349)
34407 T 1JYE_A 58 GKQSLLIGVATSSLAL------------HAPSQIVAAILSRADQLG--------ASVVVSMVER-SGV----EACKTAVH 112 (349)
34408 T ss_dssp ----CEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT--------CEEEEEECCS-SSH----HHHHHHHH
34409 T ss_pred cCCCcEEEEEeCCccC------------ccHHHHHHHHHHHHHHcC--------CEEEEEecCC-ChH----HHHHHHHH
34410 Confidence 4578899999987542 255677788888887653 3333322221 121 22233344
34411
34412
34413 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
34414 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
34415 +++. .++|++|+...+.........+...++|+|..+...+ +.+..+..+...
34416 T Consensus 113 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~--------~~~~~v~~d~~~ 165 (349)
34417 T 1JYE_A 113 NLLA-------------------QRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQ--------TPINSIIFSHED 165 (349)
34418 T ss_dssp HHHT-------------------TTCSCEEEESCCCHHHHHHHHHHTTTSCEEESSSCTT--------SSSCEEEECHHH
34419 T ss_pred HHHh-------------------cCCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEeCCCC--------CCCCEEEEccHH
34420 Confidence 4332 4788888764443322222345678999998765322 234455666666
34421
34422
34423 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAV 278 (908)
34424 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vi 278 (908)
34425 .+..+++++.+.++++++++.. +..+...+.++|++.+++. ++.+....... .+..+....+++++. ..++++|
34426 T Consensus 166 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~l~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~i 242 (349)
34427 T 1JYE_A 166 GTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRN-QIQPIAEREGD--WSAMSGFQQTMQMLNEGIVPTAM 242 (349)
34428 T ss_dssp HHHHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHHHHHHHHHT-TCCCSEEEECC--SSHHHHHHHHHHHHHTTCCCSEE
34429 T ss_pred HHHHHHHHHHHCCCCcEEEEeCCcccHHHHHHHHHHHHHHHHC-CCCCceeeecC--CChhHHHHHHHHHHhcCCCCCEE
34430 Confidence 6777788876668899999985 3345667788888888775 35443211111 111223334455542 1347777
34431
34432
34433 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
34434 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
34435 ++.. +..+..+++++++.|+.
34436 T Consensus 243 ~~~~-d~~a~~~~~~l~~~g~~ 263 (349)
34437 T 1JYE_A 243 LVAN-DQMALGAMRAITESGLR 263 (349)
34438 T ss_dssp EESS-HHHHHHHHHHHHHTTCC
34439 T ss_pred EEcC-HHHHHHHHHHHHHcCCC
34440 Confidence 6654 44566778888887764
34441
34442
34443 No 233
34444 >2PE5_B Lactose operon repressor/DNA Complex; Lac repressor, allosteric effectors, gene; HET: 145; 3.5A {Escherichia coli} SCOP: a.35.1.5, c.93.1.1
34445 Probab=97.02 E-value=1.3e-06 Score=89.42 Aligned_cols=203 Identities=12% Similarity=0.060 Sum_probs=116.8 Template_Neff=11.800
34446
34447 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
34448 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
34449 ..+.++||++.|..+. .++..+..+++.++++.+ +++.+...+. .++ +...+.++
34450 T Consensus 57 ~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~-~~~----~~~~~~~~ 111 (330)
34451 T 2PE5_B 57 GKQLLLIGVATSSLAL------------HAPSQIVAAIKSRADQLG--------ASVVVSMVER-SGV----EACKAAVH 111 (330)
34452 T ss_dssp TCCCEEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT--------EEEEEEECCS-CSH----HHHHHHHH
34453 T ss_pred hCCCCEEEEEeCCCCC------------ccHHHHHHHHHHHHHHcC--------CEEEEEecCC-CcH----HHHHHHHH
34454 Confidence 3568899999987542 245677888888887753 3444433332 221 22233344
34455
34456
34457 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
34458 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
34459 +++. .++|++|+...+.........+...++|+|..+...+ +.++.+..+...
34460 T Consensus 112 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~--------~~~~~v~~d~~~ 164 (330)
34461 T 2PE5_B 112 NLLA-------------------QRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQ--------TPINSIIFSHED 164 (330)
34462 T ss_dssp HHHH-------------------TTCSEEEEESCCCHHHHHHHHHHSCSSCEEESSSCSS--------SSSCEEEECHHH
34463 T ss_pred HHHh-------------------CCCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCCCC--------CCCCEEEEccHH
34464 Confidence 3332 4788888754433322222234578999998765422 234455566666
34465
34466
34467 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAV 278 (908)
34468 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vi 278 (908)
34469 .+..+++++.+.++++++++.. ++.....+.++|++.+++. ++.+....... .+..+....+.+++. ..++++|
34470 T Consensus 165 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~i 241 (330)
34471 T 2PE5_B 165 GTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRN-QIQPIAEREGD--WSAMSGFQQTMQMLNEGIVPTAM 241 (330)
34472 T ss_dssp HHHHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHHHHHHHHTT-TCCCSCEEECC--SCHHHHHHHHHHHHHHTCCCSEE
34473 T ss_pred HHHHHHHHHHHCCCCcEEEEeCCcccccHHHHHHHHHHHHHHC-CCCCceeeeCC--CchhHHHHHHHHHHhcCCCCCEE
34474 Confidence 6777778776668889999985 3345566778888888775 34433211111 111122333444442 1247777
34475
34476
34477 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
34478 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
34479 ++.. +..+..+++++++.|..
34480 T Consensus 242 ~~~~-~~~a~~~~~~l~~~g~~ 262 (330)
34481 T 2PE5_B 242 LVAN-DQMALGAMRAITESGLR 262 (330)
34482 T ss_dssp EESS-HHHHHHHHHHHHHTTCC
34483 T ss_pred EEcC-HHHHHHHHHHHHHCCCC
34484 Confidence 6664 44566778888877764
34485
34486
34487 No 234
34488 >3C3K_B Alanine racemase (E.C.5.1.1.1); STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE; HET: GOL; 1.99A {Actinobacillus succinogenes}
34489 Probab=97.01 E-value=1.3e-06 Score=87.08 Aligned_cols=203 Identities=14% Similarity=0.060 Sum_probs=115.2 Template_Neff=11.800
34490
34491 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
34492 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
34493 ..+++.+||++.|.... .++.....+++.++++.+ + ++.+.+...+. ....+.+
34494 T Consensus 4 ~~~~~~~I~~~~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~~ 57 (285)
34495 T 3C3K_B 4 RTAKTGMLLVMVSNIAN------------PFCAAVVKGIEKTAEKNG--------Y--RILLCNTESDL----ARSRSCL 57 (285)
34496 T ss_dssp ---CCEEEEEEESCTTS------------HHHHHHHHHHHHHHHTTT--------E--EEEEEECTTCH----HHHHHHT
34497 T ss_pred ccCCCceEEEEecCCCc------------HHHHHHHHHHHHHHHHcC--------C--EEEEEeCCCCH----HHHHHHH
34498 Confidence 34567899999984321 355677888888887753 2 33444443332 1222333
34499
34500
34501 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
34502 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
34503 +.+.. .++|++|+...+.....+ ..+.. ++|+|..+...+ .+..+.+.+++.
34504 T Consensus 58 ~~~~~-------------------~~~d~ii~~~~~~~~~~~-~~~~~-~ip~v~~~~~~~-------~~~~~~v~~d~~ 109 (285)
34505 T 3C3K_B 58 TLLSG-------------------KMVDGVITMDALSELPEL-QNIIG-AFPWVQCAEYDP-------LSTVSSVSIDDV 109 (285)
34506 T ss_dssp HHHHT-------------------TSCSCEEECSCGGGHHHH-HHHHT-TSCEEEESCCCT-------TCSSEEEECCHH
34507 T ss_pred HHHhc-------------------CCCCEEEEecCCCCcHHH-HHHHh-cCCEEEeCCCCC-------CCCCcEEEeCcH
34508 Confidence 33322 478888876544332222 22333 899888765432 134566777777
34509
34510
34511 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASE--GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARA 277 (908)
34512 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~--~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
34513 ..++.+++++.+.+.++++++..+ ......+.++|++.+++. ++.+....... ..+..+....+++++. ..++++
34514 T Consensus 110 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~ 187 (285)
34515 T 3C3K_B 110 AASEYVVDQLVKSGKKRIALINHDLAYQYAQHRESGYLNRLKFH-GLDYSRISYAE-NLDYMAGKLATFSLLKSAVKPDA 187 (285)
34516 T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHHHHHT-TCCCCEEEECS-SSSHHHHHHHHHHHHSSSSCCSE
34517 T ss_pred HHHHHHHHHHHHCCCCcEEEEecCccchhHHHHHHHHHHHHHHC-CCCCCceeecC-CCchHHHHHHHHHHHhcCCCCCE
34518 Confidence 777788888766678899999853 334566778888887765 34433211110 0111223333444432 134777
34519
34520
34521 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
34522 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
34523 |++.. +..+..+++++++.|+.
34524 T Consensus 188 i~~~~-~~~a~~~~~al~~~g~~ 209 (285)
34525 T 3C3K_B 188 IFAIS-DVLAAGAIQALTESGLS 209 (285)
34526 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
34527 T ss_pred EEECC-hHHHHHHHHHHHHCCCC
34528 Confidence 76664 44567788888887764
34529
34530
34531 No 235
34532 >8ABP_A L-ARABINOSE-BINDING PROTEIN (MUTANT WITH MET; BINDING PROTEINS; HET: GAL, GLA; 1.49A {Escherichia coli} SCOP: c.93.1.1
34533 Probab=97.01 E-value=1.3e-06 Score=88.08 Aligned_cols=214 Identities=12% Similarity=0.073 Sum_probs=115.1 Template_Neff=11.900
34534
34535 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
34536 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
34537 +++||++.|..+. .++.....+++.++++.+ +++.+.++ .++ +...+.+++++
34538 T Consensus 2 ~~~Ig~~~~~~~~------------~~~~~~~~~~~~~~~~~~----------~~~~~~~~-~~~----~~~~~~~~~l~ 54 (306)
34539 T 8ABP_A 2 NLKLGFLVKQPEE------------PWFQTEWKFADKAGKDLG----------FEVIKIAV-PDG----EKTLNAIDSLA 54 (306)
34540 T ss_dssp CEEEEEEESCTTS------------HHHHHHHHHHHHHHHHHT----------EEEEEEEC-CSH----HHHHHHHHHHH
34541 T ss_pred CeEEEEEECCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEEeC-CCH----HHHHHHHHHHH
34542 Confidence 5789999987542 245667788888877652 33344444 232 22233344433
34543
34544
34545 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIG-AAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
34546 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg-~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
34547 . ++++++|. +..+.........+...++|+|..+...+.... ...++++++.+++...+
34548 T Consensus 55 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~~-~~~~~~~~v~~d~~~~~ 114 (306)
34549 T 8ABP_A 55 A-------------------SGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKG-KPMDTVPLVMLAATKIG 114 (306)
34550 T ss_dssp H-------------------TTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCBCTTS-CBCTTSCEEEECHHHHH
34551 T ss_pred H-------------------cCCCEEEEeCCCcchhHHHHHHHHhCCCEEEEEccccccCCC-CCcccccEEeechhHHH
34552 Confidence 2 46786554 333332234445667789999988765432211 11345677777777777
34553
34554
34555 Q NP_000836.2 204 QAMVDIVTA----LGWN--YVSTLASE---GNYGESGVEAFTQISREIG--GVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
34556 Q Consensus 204 ~~~~~~l~~----~~~~--~v~ii~~~---~~~~~~~~~~~~~~~~~~~--~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
34557 +.+++++.+ .+++ +++++..+ ..++..+.++|++.+++.+ ..++....... .+..+....++++++
34558 T Consensus 115 ~~~~~~l~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~- 191 (306)
34559 T 8ABP_A 115 ERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKS--NDIPGAFDAANSMLV- 191 (306)
34560 T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEEECTTSHHHHHHHHHHHHHHHHHTCCGGGEEEEECSS--SSHHHHHHHHHHHHT-
34561 T ss_pred HHHHHHHHHHHHHcCCCcccceEEEEecCCChHHHHHHHHHHHHHHHcCCCcceeeeecCCC--CChhHHHHHHHHHHH-
34562 Confidence 777776643 3555 66666532 2455567778887777642 02222111111 111233444555543
34563
34564
34565 Q NP_000836.2 273 PNARA---VIMFANEDDIRRILEAAKKLNQS-GHFLWIGS 308 (908)
34566 Q Consensus 273 ~~~~v---iv~~~~~~~~~~~l~~~~~~g~~-~~~~~i~~ 308 (908)
34567 .+++. ++++.++..+..+++++++.|+. .++.+++.
34568 T Consensus 192 ~~~~~~~~~i~~~~~~~a~~~~~~~~~~g~~~~~i~i~~~ 231 (306)
34569 T 8ABP_A 192 QHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGI 231 (306)
34570 T ss_dssp TCTTCSEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEE
34571 T ss_pred HCCCCceEEEEEcchhhHHHHHHHHHhCCCCHhcEEEEEe
34572 Confidence 23443 33444455567788888888764 13444443
34573
34574
34575 No 236
34576 >5ABP_A L-ARABINOSE-BINDING PROTEIN COMPLEX WITH D-GALACTOSE; BINDING PROTEIN; HET: GAL, GLA; 1.8A {Escherichia coli} SCOP: c.93.1.1
34577 Probab=97.01 E-value=1.3e-06 Score=88.06 Aligned_cols=214 Identities=12% Similarity=0.076 Sum_probs=114.6 Template_Neff=11.900
34578
34579 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
34580 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
34581 +++||++.|..+. .++.....+++.++++.+ +++.+.+. .++ ....+.+++++
34582 T Consensus 2 ~~~Ig~~~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~-~~~----~~~~~~~~~l~ 54 (306)
34583 T 5ABP_A 2 NLKLGFLVKQPEE------------PWFQTEWKFADKAGKDLG----------FEVIKIAV-PDG----EKTLNAIDSLA 54 (306)
34584 T ss_dssp CCEEEEEESCTTS------------HHHHHHHHHHHHHHHHHT----------CEEEEEEC-CSH----HHHHHHHHHHH
34585 T ss_pred CcEEEEEeCCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEEeC-CCH----HHHHHHHHHHH
34586 Confidence 5789999987542 255677788888877652 23333443 232 22233444443
34587
34588
34589 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVI-GAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
34590 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vI-g~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
34591 . ++++++| ++..+.........+...++|+|.++...+.... ...++++++.+++...+
34592 T Consensus 55 ~-------------------~~~d~iii~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~~-~~~~~~~~v~~d~~~~~ 114 (306)
34593 T 5ABP_A 55 A-------------------SGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKG-KPMDTVPLVMMAATKIG 114 (306)
34594 T ss_dssp H-------------------TTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCBCTTS-CBCTTSCEEEECHHHHH
34595 T ss_pred H-------------------CCCCEEEEeCCCcchHHHHHHHHHhCCCEEEEEcCccccCCC-CCCccceEeeechhHHH
34596 Confidence 2 4677544 4444333334455667789999988765432111 01235677777776667
34597
34598
34599 Q NP_000836.2 204 QAMVDIVTA----LGWN--YVSTLASE---GNYGESGVEAFTQISREIG--GVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
34600 Q Consensus 204 ~~~~~~l~~----~~~~--~v~ii~~~---~~~~~~~~~~~~~~~~~~~--~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
34601 +.+++++.+ .+++ ++.++..+ ..++..+.+++++.+++.+ ..++....... .+..+....++++++
34602 T Consensus 115 ~~~~~~l~~~~~~~g~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~l~- 191 (306)
34603 T 5ABP_A 115 ERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKS--NDIPGAFDAANSMLV- 191 (306)
34604 T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEEECTTSHHHHHHHHHHHHHHHHTTCCGGGEEEEECSS--SSHHHHHHHHHHHHT-
34605 T ss_pred HHHHHHHHHHHHHcCCCccccEEEEEEcCCChHHHHHHHHHHHHHHHcCCCCceeEecCCCC--CChHHHHHHHHHHHH-
34606 Confidence 777766533 3555 76666532 2455667778888777642 02222111111 112234455566553
34607
34608
34609 Q NP_000836.2 273 PNARA---VIMFANEDDIRRILEAAKKLNQS-GHFLWIGS 308 (908)
34610 Q Consensus 273 ~~~~v---iv~~~~~~~~~~~l~~~~~~g~~-~~~~~i~~ 308 (908)
34611 .+++. ++++.++..+..+++++++.|+. .++.+++.
34612 T Consensus 192 ~~~~~~~~~i~~~~~~~a~~~~~~~~~~g~~~~~i~v~~~ 231 (306)
34613 T 5ABP_A 192 QHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGI 231 (306)
34614 T ss_dssp TCTTCCEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEE
34615 T ss_pred HCCCCceEEEEEechHHHHHHHHHHHhCCCChhcEEEEEe
34616 Confidence 23443 23333444567788888887764 13344443
34617
34618
34619 No 237
34620 >4KVF_A Rhamnose ABC transporter, periplasmic rhamnose-binding; structural genomics, PSI-Biology, Protein Structure; HET: GOL; 1.722A {Kribbella flavida}
34621 Probab=96.99 E-value=1.5e-06 Score=89.53 Aligned_cols=217 Identities=11% Similarity=0.057 Sum_probs=118.1 Template_Neff=11.400
34622
34623 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
34624 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
34625 .....+.++||++.|..+. .++.....+++.++++.| +++.+...+. .++ ....+
34626 T Consensus 33 ~~~~~~~~~Ig~v~~~~~~------------~~~~~~~~g~~~a~~~~~--------~~v~~~~~~~-~~~----~~~~~ 87 (342)
34627 T 4KVF_A 33 NAPLKEGLKIAYLPKQLNN------------PYTDVEVGGGKVAVGEIK--------GEYKLVGPND-ASA----SSQVS 87 (342)
34628 T ss_dssp TSCCCSSCEEEEECSSSSS------------HHHHHHHHHHHHHHHHTT--------CEEEECCCCT-TCC----CCHHH
34629 T ss_pred CCCccCCeEEEEEcCCCCC------------hHHHHHHHHHHHHHHHhC--------CEEEEECCCC-CCH----HHHHH
34630 Confidence 3455678999999986542 245667788888888764 2344443332 221 12233
34631
34632
34633 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIG-AAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
34634 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg-~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
34635 .+++++. ++++++|+ +..+.........+...++|+|..+...+. ..++.+....
34636 T Consensus 88 ~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~v~~~ 143 (342)
34637 T 4KVF_A 88 YINTLIQ-------------------QQQDVIVVAANDPNAVCPSLNQARKADIKVVTFDSDAAK-----TCRDAFINQA 143 (342)
34638 T ss_dssp HHHHHHH-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCEEEEESSCCCG-----GGCSEEEESS
34639 T ss_pred HHHHHHH-------------------cCCCEEEEcCCCHHhhHHHHHHHHHCCCEEEEECCCCcc-----cccceEeeCC
34640 Confidence 3444332 47888887 333333334445566789999987654331 1122233222
34641
34642
34643 Q NP_000836.2 198 PDSYQAQAMVDIVTALG--WNYVSTLAS--EGNYGESGVEAFTQISREI--GGVCIAQSQKIPREPRPGEFEKIIKRLLE 271 (908)
34644 Q Consensus 198 ~~~~~~~~~~~~l~~~~--~~~v~ii~~--~~~~~~~~~~~~~~~~~~~--~~i~v~~~~~~~~~~~~~~~~~~~~~l~~ 271 (908)
34645 +....++.+++++.+.+ .++++++.. ++.+...+.++|++.+++. .++++....... .+..+....++++++
34646 T Consensus 144 ~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 221 (342)
34647 T 4KVF_A 144 TTQGIGESLVKMAKELAGGSGEIAVLSATPNATNQNSWIEVMKTELAKPENAKLKLVKIAYGN--DDDQKSFTEAQGLLQ 221 (342)
34648 T ss_dssp CHHHHHHHHHHHHHHHTTTCEEEEEEESCTTCHHHHHHHHHHHHHHTSGGGTTEEEEEEEECT--TCHHHHHHHHHHHHH
34649 T ss_pred CHHHHHHHHHHHHHHHhCCCcEEEEEECCCCchhHHHHHHHHHHHHcCcccCCcEEEEEeeCC--CCHHHHHHHHHHHHH
34650 Confidence 22446677777775533 688999874 3345566777887777642 123332211111 112234445555553
34651
34652
34653 Q NP_000836.2 272 T-PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIG 307 (908)
34654 Q Consensus 272 ~-~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~ 307 (908)
34655 . .++++|++.. +..+..+++++++.++..++.+++
34656 T Consensus 222 ~~~~~~~i~~~~-~~~~~~~~~~~~~~g~~~~v~i~~ 257 (342)
34657 T 4KVF_A 222 SYPNLKVIVSPT-TVGIAAASRYVSASSYKGKVAITG 257 (342)
34658 T ss_dssp HCTTEEEEEECS-HHHHHHHHHHHHTSTTTTTSEEEE
34659 T ss_pred HCCCccEEEEcC-hhHHHHHHHHHHHcCCCCceEEEE
34660 Confidence 1 2456666553 345566777777777632333443
34661
34662
34663 No 238
34664 >3EDC_D Lactose operon repressor; Lac-repressor, allosteric, tetramer, DNA-binding, Repressor; HET: HEZ; 2.1A {Escherichia coli K12}
34665 Probab=96.98 E-value=1.5e-06 Score=90.23 Aligned_cols=204 Identities=12% Similarity=0.068 Sum_probs=115.8 Template_Neff=11.100
34666
34667 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
34668 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
34669 ...+.++||++.|..+. .++..+.++++.++++.+ +++.+...+. .++ +...+.+
34670 T Consensus 57 ~~~~~~~I~~v~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~-~~~----~~~~~~~ 111 (360)
34671 T 3EDC_D 57 AGKQSLLIGVATSSLAL------------HAPSQIVAAIKSRADQLG--------ASVVVSMVER-SGV----EACKAAV 111 (360)
34672 T ss_dssp ----CCEEEEEESCTTS------------HHHHHHHHHHHHHHHHHT--------CEEEEEECCT-TCH----HHHHHHH
34673 T ss_pred ccCCCCEEEEEeCCccC------------ccHHHHHHHHHHHHHHcC--------CEEEEEecCC-ChH----HHHHHHH
34674 Confidence 34578899999987542 255677788888887753 3444433332 221 1223334
34675
34676
34677 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
34678 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
34679 ++++. +++|++|+...+.........+...++|+|..+...+ +.++.+..+..
34680 T Consensus 112 ~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~--------~~~~~v~~d~~ 164 (360)
34681 T 3EDC_D 112 HNLLA-------------------QRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQ--------TPINSIIFSHE 164 (360)
34682 T ss_dssp HHHHH-------------------TTCSEEEEESCCCHHHHHHHHHHTTTSCEEESSSCTT--------SSSCEEEECHH
34683 T ss_pred HHHHH-------------------CCCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCCCC--------CCCCEEEEccH
34684 Confidence 43332 4788888764443322222235678999998765432 23455666666
34685
34686
34687 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
34688 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
34689 ..+..+++++.+.+.++++++.. ++.....+.++|++.+++. ++.+....... .+.......+++++.. .++|+
34690 T Consensus 165 ~~~~~~~~~l~~~g~~~i~~l~~~~~~~~~~~r~~g~~~~l~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~d~ 241 (360)
34691 T 3EDC_D 165 DGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRN-QIQPIAEREGD--WSAMSGFQQTMQMLNEGIVPTA 241 (360)
34692 T ss_dssp HHHHHHHHHHHHHTCCCEEEEECCTTSHHHHHHHHHHHHHHHHT-TCCCSEEEECC--SSHHHHHHHHHHHHHTTCCCSE
34693 T ss_pred HHHHHHHHHHHHCCCCcEEEEeCCcccccHHHHHHHHHHHHHHC-CCCCceeeecC--CChhhHHHHHHHHHhcCCCCCE
34694 Confidence 66777777776667889999885 3445667788888888775 34443211111 1111223344444421 24777
34695
34696
34697 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
34698 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
34699 |++.. +..+..+++++++.|+.
34700 T Consensus 242 i~~~~-~~~a~~~~~~l~~~g~~ 263 (360)
34701 T 3EDC_D 242 MLVAN-DQMALGAMRAITESGLR 263 (360)
34702 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
34703 T ss_pred EEECC-HHHHHHHHHHHHHCCCC
34704 Confidence 76654 44566777888877764
34705
34706
34707 No 239
34708 >3KJX_D Transcriptional regulator, LacI family; Transcriptional regulator, Lacl family, Protein; 2.33A {Silicibacter pomeroyi}
34709 Probab=96.97 E-value=1.6e-06 Score=89.40 Aligned_cols=204 Identities=12% Similarity=0.070 Sum_probs=117.7 Template_Neff=11.500
34710
34711 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
34712 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
34713 ..+..+||++.|..+. .+...+..+++.++++.+ + ++.+.+...++ +...+.++
34714 T Consensus 65 ~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~l~ 118 (344)
34715 T 3KJX_D 65 SNRVNLVAVIIPSLSN------------MVFPEVLTGINQVLEDTE--------L--QPVVGVTDYLP----EKEEKVLY 118 (344)
34716 T ss_dssp SSCCSEEEEEESCSSS------------SSHHHHHHHHHHHHTTSS--------C--EEEEEECTTCH----HHHHHHHH
34717 T ss_pred hCCCCeEEEEecCccc------------chHHHHHHHHHHHHHHcC--------C--EEEEEeCCCCH----HHHHHHHH
34718 Confidence 3567899999986532 245567778777776642 2 33344433332 22233444
34719
34720
34721 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
34722 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
34723 +++. .++|++|+....... .....+...++|+|..+.... .+..+.+..++..
34724 T Consensus 119 ~l~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~ 171 (344)
34725 T 3KJX_D 119 EMLS-------------------WRPSGVIIAGLEHSE-AARAMLDAAGIPVVEIMDSDG-------KPVDAMVGISHRR 171 (344)
34726 T ss_dssp HHHT-------------------TCCSEEEEECSCCCS-HHHHHHHTCSSCEEEEEECSS-------CCSSCEEEECHHH
34727 T ss_pred HHHh-------------------cCCCEEEEeCCCCCH-HHHHHHHHcCCCEEEEeCCCC-------CCcCceeEechHH
34728 Confidence 4332 467888765433322 344556678999998765321 2345566777777
34729
34730
34731 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEG---NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
34732 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~---~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
34733 .++.+++++.+.+.++++++.... .....+.++|++.+++. ++.+..........+..+....++++++. .++++
34734 T Consensus 172 ~g~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 250 (344)
34735 T 3KJX_D 172 AGREMAQAILKAGYRRIGFMGTKMPLDYRARKRFEGFTEVLGKN-GVEIEDREFYSGGSALAKGREMTQAMLERSPDLDF 250 (344)
34736 T ss_dssp HHHHHHHHHHHTTCCSEEEEESSTTTCHHHHHHHHHHHHHHHHT-TCCCSEEEECCSCCCHHHHHHHHHHHHHHCTTCCE
34737 T ss_pred HHHHHHHHHHHcCCCcEEEEccCCCCChHHHHHHHHHHHHHHHC-CCCcCcceeecCCCcHHHHHHHHHHHHHhCCCCCE
34738 Confidence 788888888766888999988543 35566778888888775 34443211111011112233445555421 24666
34739
34740
34741 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
34742 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
34743 |++.. +..+..+++++++.|..
34744 T Consensus 251 i~~~~-~~~a~~~~~~l~~~g~~ 272 (344)
34745 T 3KJX_D 251 LYYSN-DMIAAGGLLYLLEQGID 272 (344)
34746 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
34747 T ss_pred EEECC-HHHHHHHHHHHHHCCCC
34748 Confidence 66553 44566777788777763
34749
34750
34751 No 240
34752 >3KJX_C Transcriptional regulator, LacI family; Transcriptional regulator, Lacl family, Protein; HET: MSE; 2.33A {Silicibacter pomeroyi}
34753 Probab=96.97 E-value=1.6e-06 Score=89.40 Aligned_cols=204 Identities=12% Similarity=0.070 Sum_probs=117.7 Template_Neff=11.500
34754
34755 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
34756 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
34757 ..+..+||++.|..+. .+...+..+++.++++.+ + ++.+.+...++ +...+.++
34758 T Consensus 65 ~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~l~ 118 (344)
34759 T 3KJX_C 65 SNRVNLVAVIIPSLSN------------MVFPEVLTGINQVLEDTE--------L--QPVVGVTDYLP----EKEEKVLY 118 (344)
34760 T ss_dssp SSCCSEEEEEESCSSS------------SSHHHHHHHHHHHHHTSS--------C--EEEEEECTTCH----HHHHHHHH
34761 T ss_pred hCCCCeEEEEecCccc------------chHHHHHHHHHHHHHHcC--------C--EEEEEeCCCCH----HHHHHHHH
34762 Confidence 3567899999986532 245567778777776642 2 33344433332 22233444
34763
34764
34765 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
34766 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
34767 +++. .++|++|+....... .....+...++|+|..+.... .+..+.+..++..
34768 T Consensus 119 ~l~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~ 171 (344)
34769 T 3KJX_C 119 EMLS-------------------WRPSGVIIAGLEHSE-AARAMLDAAGIPVVEIMDSDG-------KPVDAMVGISHRR 171 (344)
34770 T ss_dssp HHHT-------------------TCCSEEEEECSCCCH-HHHHHHHHCSSCEEEEEECTT-------CCSSEEEEECHHH
34771 T ss_pred HHHh-------------------cCCCEEEEeCCCCCH-HHHHHHHHcCCCEEEEeCCCC-------CCcCceeEechHH
34772 Confidence 4332 467888765433322 344556678999998765321 2345566777777
34773
34774
34775 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEG---NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
34776 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~---~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
34777 .++.+++++.+.+.++++++.... .....+.++|++.+++. ++.+..........+..+....++++++. .++++
34778 T Consensus 172 ~g~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 250 (344)
34779 T 3KJX_C 172 AGREMAQAILKAGYRRIGFMGTKMPLDYRARKRFEGFTEVLGKN-GVEIEDREFYSGGSALAKGREMTQAMLERSPDLDF 250 (344)
34780 T ss_dssp HHHHHHHHHHTTTCCSEEEECCSTTTCHHHHHHHHHHHHHHHTT-TCCEEEEECCSSCCCHHHHHHHHHHHHHHCTTCCE
34781 T ss_pred HHHHHHHHHHHcCCCcEEEEccCCCCChHHHHHHHHHHHHHHHC-CCCcCcceeecCCCcHHHHHHHHHHHHHhCCCCCE
34782 Confidence 788888888766888999988543 35566778888888775 34443211111011112233445555421 24666
34783
34784
34785 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
34786 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
34787 |++.. +..+..+++++++.|..
34788 T Consensus 251 i~~~~-~~~a~~~~~~l~~~g~~ 272 (344)
34789 T 3KJX_C 251 LYYSN-DMIAAGGLLYLLEQGID 272 (344)
34790 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
34791 T ss_pred EEECC-HHHHHHHHHHHHHCCCC
34792 Confidence 66553 44566777788777763
34793
34794
34795 No 241
34796 >1GLG_A GALACTOSE/GLUCOSE-BINDING PROTEIN COMPLEXED WITH D-GALACTOSE; GALACTOSE-BINDING PROTEIN; HET: GAL; 2.0A {Escherichia coli} SCOP: c.93.1.1
34797 Probab=96.97 E-value=1.6e-06 Score=87.65 Aligned_cols=217 Identities=13% Similarity=0.037 Sum_probs=117.0 Template_Neff=11.900
34798
34799 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
34800 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
34801 +++||++.|..+. .++..+..+++.++++.+ | +++.+.|+..+. +...+.+++++
34802 T Consensus 2 ~~~Ig~v~~~~~~------------~~~~~~~~~~~~~~~~~~-------g--~~~~~~~~~~~~----~~~~~~~~~l~ 56 (309)
34803 T 1GLG_A 2 DTRIGVTIYKYDD------------NFMSVVRKAIEQDAKAAP-------D--VQLLMNDSQNDQ----SKQNDQIDVLL 56 (309)
34804 T ss_dssp CEEEEEEESCTTC------------HHHHHHHHHHHHHHHTCT-------T--EEEEEEECTTCH----HHHHHHHHHHH
34805 T ss_pred CcEEEEEEccCCC------------HHHHHHHHHHHHHHHhCC-------C--CeEEEecCCCCH----HHHHHHHHHHH
34806 Confidence 5789999987542 255677788888887653 2 234444443332 22233344333
34807
34808
34809 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
34810 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
34811 . ++++++|+...+... ......+...++|+|..+...+.... ...++.+++.+++...+
34812 T Consensus 57 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~~-~~~~~~~~v~~d~~~~~ 116 (309)
34813 T 1GLG_A 57 A-------------------KGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKAL-DSYDKAYYVGTDSKESG 116 (309)
34814 T ss_dssp H-------------------TTCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESSCCCHHHH-HTCTTEEEEECCHHHHH
34815 T ss_pred H-------------------CCCCEEEEeCCChhHHHHHHHHHhhCCCCEEEEccCCChhhc-ccCCcceEEecCcHHHH
34816 Confidence 2 477877764433322 23445566789999987764432110 01245667777776666
34817
34818
34819 Q NP_000836.2 204 QAMVDIVT-A----L-------GWNYVSTLA--SEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRL 269 (908)
34820 Q Consensus 204 ~~~~~~l~-~----~-------~~~~v~ii~--~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l 269 (908)
34821 +.+++++. + . +.++++++. .++.++..+.+++++.+++. ++.+........+....+....++++
34822 T Consensus 117 ~~~~~~~~~~l~~~~g~~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (309)
34823 T 1GLG_A 117 IIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDK-GIKTEQLQLDTAMWDTAQAKDKMDAW 195 (309)
34824 T ss_dssp HHHHHHHHHHHHHCGGGCTTCSSSEEEEEEECSTTCHHHHHHHHHHHHHHHHT-TCCEEEEEEEECTTCHHHHHHHHHHH
34825 T ss_pred HHHHHHHHHHHHHccCCccCCCCcEEEEEEEcCCCCccHHHHHHHHHHHHHhc-CCceeEeeccccCCCHHHHHHHHHHH
34826 Confidence 66654432 1 1 457788884 33445566777888877764 34432211111001112333445555
34827
34828
34829 Q NP_000836.2 270 LET---PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSD 309 (908)
34830 Q Consensus 270 ~~~---~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~ 309 (908)
34831 ++. .++++|++.. +..+..+++++++.|.. ++.+++.+
34832 T Consensus 196 ~~~~~~~~~~~i~~~~-~~~a~~~~~~l~~~g~~-~~~v~~~~ 236 (309)
34833 T 1GLG_A 196 LSGPNANKIEVVIANN-DAMAMGAVEALKAHNKS-SIPVFGVD 236 (309)
34834 T ss_dssp TTSTTTTTCCEEEESS-HHHHHHHHHHHHHTTCT-TSCEECSB
34835 T ss_pred HcCCCCCCCCEEEECC-HHHHHHHHHHHHHCCCC-CCCEEEec
34836 Confidence 421 3567777664 44556678888877762 33444443
34837
34838
34839 No 242
34840 >2FVY_A D-galactose-binding periplasmic protein; PERIPLASMIC BINDING PROTIEN, HINGE, CHEMOTAXIS; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1
34841 Probab=96.97 E-value=1.6e-06 Score=87.65 Aligned_cols=217 Identities=13% Similarity=0.037 Sum_probs=117.0 Template_Neff=11.900
34842
34843 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
34844 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
34845 +++||++.|..+. .++..+..+++.++++.+ | +++.+.|+..+. +...+.+++++
34846 T Consensus 2 ~~~Ig~v~~~~~~------------~~~~~~~~~~~~~~~~~~-------g--~~~~~~~~~~~~----~~~~~~~~~l~ 56 (309)
34847 T 2FVY_A 2 DTRIGVTIYKYDD------------NFMSVVRKAIEQDAKAAP-------D--VQLLMNDSQNDQ----SKQNDQIDVLL 56 (309)
34848 T ss_dssp CEEEEEEESCTTS------------HHHHHHHHHHHHHHHTCT-------T--EEEEEEECTTCH----HHHHHHHHHHH
34849 T ss_pred CcEEEEEEccCCC------------HHHHHHHHHHHHHHHhCC-------C--CeEEEecCCCCH----HHHHHHHHHHH
34850 Confidence 5789999987542 255677788888887653 2 234444443332 22233344333
34851
34852
34853 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
34854 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
34855 . ++++++|+...+... ......+...++|+|..+...+.... ...++.+++.+++...+
34856 T Consensus 57 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~~-~~~~~~~~v~~d~~~~~ 116 (309)
34857 T 2FVY_A 57 A-------------------KGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKAL-DSYDKAYYVGTDSKESG 116 (309)
34858 T ss_dssp H-------------------TTCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESSCCCHHHH-HTCTTEEEEECCHHHHH
34859 T ss_pred H-------------------CCCCEEEEeCCChhHHHHHHHHHhhCCCCEEEEccCCChhhc-ccCCcceEEecCcHHHH
34860 Confidence 2 477877764433322 23445566789999987764432110 01245667777776666
34861
34862
34863 Q NP_000836.2 204 QAMVDIVT-A----L-------GWNYVSTLA--SEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRL 269 (908)
34864 Q Consensus 204 ~~~~~~l~-~----~-------~~~~v~ii~--~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l 269 (908)
34865 +.+++++. + . +.++++++. .++.++..+.+++++.+++. ++.+........+....+....++++
34866 T Consensus 117 ~~~~~~~~~~l~~~~g~~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (309)
34867 T 2FVY_A 117 IIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDK-GIKTEQLQLDTAMWDTAQAKDKMDAW 195 (309)
34868 T ss_dssp HHHHHHHHHHHHHCGGGCTTCSSSEEEEEEECSTTCHHHHHHHHHHHHHHHHT-TCCEEEEEEEECTTCHHHHHHHHHHH
34869 T ss_pred HHHHHHHHHHHHHccCCccCCCCcEEEEEEEcCCCCccHHHHHHHHHHHHHhc-CCceeEeeccccCCCHHHHHHHHHHH
34870 Confidence 66654432 1 1 457788884 33445566777888877764 34432211111001112333445555
34871
34872
34873 Q NP_000836.2 270 LET---PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSD 309 (908)
34874 Q Consensus 270 ~~~---~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~~ 309 (908)
34875 ++. .++++|++.. +..+..+++++++.|.. ++.+++.+
34876 T Consensus 196 ~~~~~~~~~~~i~~~~-~~~a~~~~~~l~~~g~~-~~~v~~~~ 236 (309)
34877 T 2FVY_A 196 LSGPNANKIEVVIANN-DAMAMGAVEALKAHNKS-SIPVFGVD 236 (309)
34878 T ss_dssp HTSTTGGGCCEEEESS-HHHHHHHHHHHHHTTCT-TSCEECSB
34879 T ss_pred HcCCCCCCCCEEEECC-HHHHHHHHHHHHHCCCC-CCCEEEec
34880 Confidence 421 3567777664 44556678888877762 33444443
34881
34882
34883 No 243
34884 >3M9W_A D-xylose-binding periplasmic protein; xylose binding protein, xylose, conformational; 2.15A {Escherichia coli}
34885 Probab=96.97 E-value=1.6e-06 Score=87.92 Aligned_cols=211 Identities=9% Similarity=0.051 Sum_probs=115.4 Template_Neff=11.500
34886
34887 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
34888 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
34889 +++||+++|.... .++.....+++.++++.+ +++.+.|...++. ...+.+++++
34890 T Consensus 2 ~~~Igvv~~~~~~------------~~~~~~~~g~~~a~~~~g----------~~l~~~~~~~~~~----~~~~~~~~l~ 55 (313)
34891 T 3M9W_A 2 EVKIGMAIDDLRL------------ERWQKDRDIFVKKAESLG----------AKVFVQSANGNEE----TQMSQIENMI 55 (313)
34892 T ss_dssp -CEEEEEESCCSS------------STTHHHHHHHHHHHHHTS----------CEEEEEECTTCHH----HHHHHHHHHH
34893 T ss_pred CcEEEEEeCCCcc------------hHHHhhHHHHHHHHHHcC----------CEEEEEeCCCCHH----HHHHHHHHHH
34894 Confidence 5789999985422 245567778888777642 3444555443322 2233344433
34895
34896
34897 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
34898 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
34899 . .+++++|....... .......+...++|+|..+...+. .++.+++..++...+
34900 T Consensus 56 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~~~~ 110 (313)
34901 T 3M9W_A 56 N-------------------RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND------ADIDFYISFDNEKVG 110 (313)
34902 T ss_dssp H-------------------TTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESSCCTT------SCCSEEEEECHHHHH
34903 T ss_pred H-------------------CCCCEEEEecCCcchHHHHHHHHHHCCCEEEEECCCCCC------CCccEEEECCHHHHH
34904 Confidence 2 46777765433322 224445566789999987654321 234466777777777
34905
34906
34907 Q NP_000836.2 204 QAMVDIVTALG-WNYVSTLAS--EGNYGESGVEAFTQISREIG---GVCIAQSQKIPREPRPGEFEKIIKRLLET--PNA 275 (908)
34908 Q Consensus 204 ~~~~~~l~~~~-~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~---~i~v~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 275 (908)
34909 ..+++++.+.+ .++++++.. +..++..+.+++++.+++.+ .+.+....... ..+..+....++++++. .++
34910 T Consensus 111 ~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 189 (313)
34911 T 3M9W_A 111 ELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD-GWLPENALKIMENALTANNNKI 189 (313)
34912 T ss_dssp HHHHHHHHHHCSSEEEEEEESCTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEECG-GGCHHHHHHHHHHHHHHTTTCC
34913 T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCChhHHHHHHHHHHHHHHhHHcCCeEEEccccCC-CCCHHHHHHHHHHHHHHCCCCC
34914 Confidence 77888775544 345777764 23455667777877776642 02222111110 01112334445555421 357
34915
34916
34917 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
34918 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
34919 ++|++.. +..+..+++++++.|+..++.+++.
34920 T Consensus 190 d~i~~~~-~~~a~~~~~~~~~~g~~~~i~vig~ 221 (313)
34921 T 3M9W_A 190 DAVVASN-DATAGGAIQALSAQGLSGKVAISGQ 221 (313)
34922 T ss_dssp CEEEESS-HHHHHHHHHHHHTTTCTTTSEECCC
34923 T ss_pred CEEEECC-hHHHHHHHHHHHHCCCCCCcEEecC
34924 Confidence 7877664 4456677888887776323334433
34925
34926
34927 No 244
34928 >3MA0_A D-xylose-binding periplasmic protein; xylose binding protein, xylose, conformational; HET: XYP; 2.2A {Escherichia coli}
34929 Probab=96.97 E-value=1.6e-06 Score=87.92 Aligned_cols=211 Identities=9% Similarity=0.051 Sum_probs=115.9 Template_Neff=11.500
34930
34931 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
34932 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
34933 +++||+++|.... .++.....+++.++++.+ +++.+.|...++. ...+.+++++
34934 T Consensus 2 ~~~Igvv~~~~~~------------~~~~~~~~g~~~a~~~~g----------~~l~~~~~~~~~~----~~~~~~~~l~ 55 (313)
34935 T 3MA0_A 2 EVKIGMAIDDLRL------------ERWQKDRDIFVKKAESLG----------AKVFVQSANGNEE----TQMSQIENMI 55 (313)
34936 T ss_dssp CCEEEEEESCSCS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECSSCHH----HHHHHHHHHH
34937 T ss_pred CcEEEEEeCCCcc------------hHHHhhHHHHHHHHHHcC----------CEEEEEeCCCCHH----HHHHHHHHHH
34938 Confidence 5789999985422 245567778888777642 3444555443322 2233344433
34939
34940
34941 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
34942 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
34943 . .+++++|....... .......+...++|+|..+...+. .++.+++..++...+
34944 T Consensus 56 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~~~~ 110 (313)
34945 T 3MA0_A 56 N-------------------RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND------ADIDFYISFDNEKVG 110 (313)
34946 T ss_dssp H-------------------TTCSEEEECCSSTTSCHHHHHHHHHTTCEEEEESSCCCS------SCCSEEEEECHHHHH
34947 T ss_pred H-------------------CCCCEEEEecCCcchHHHHHHHHHHCCCEEEEECCCCCC------CCccEEEECCHHHHH
34948 Confidence 2 46777765433322 224445566789999987654321 234466777777777
34949
34950
34951 Q NP_000836.2 204 QAMVDIVTALG-WNYVSTLAS--EGNYGESGVEAFTQISREIG---GVCIAQSQKIPREPRPGEFEKIIKRLLET--PNA 275 (908)
34952 Q Consensus 204 ~~~~~~l~~~~-~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~---~i~v~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 275 (908)
34953 ..+++++.+.+ .++++++.. +..++..+.+++++.+++.+ .+.+....... ..+..+....++++++. .++
34954 T Consensus 111 ~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 189 (313)
34955 T 3MA0_A 111 ELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD-GWLPENALKIMENALTANNNKI 189 (313)
34956 T ss_dssp HHHHHHHHHHCSSEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEECG-GGCHHHHHHHHHHHHHHTTTCC
34957 T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCChhHHHHHHHHHHHHHHhHHcCCeEEEccccCC-CCCHHHHHHHHHHHHHHCCCCC
34958 Confidence 77888775544 345777764 23455667777877776642 02222111110 01112334445555421 357
34959
34960
34961 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
34962 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
34963 ++|++.. +..+..+++++++.|+..++.+++.
34964 T Consensus 190 d~i~~~~-~~~a~~~~~~~~~~g~~~~i~vig~ 221 (313)
34965 T 3MA0_A 190 DAVVASN-DATAGGAIQALSAQGLSGKVAISGQ 221 (313)
34966 T ss_dssp CEEEESS-HHHHHHHHHHHHTTTCTTTSEECCC
34967 T ss_pred CEEEECC-hHHHHHHHHHHHHCCCCCCcEEecC
34968 Confidence 7877664 4456677888887776323334433
34969
34970
34971 No 245
34972 >3MA0_C D-xylose-binding periplasmic protein; xylose binding protein, xylose, conformational; HET: XYP; 2.2A {Escherichia coli}
34973 Probab=96.97 E-value=1.6e-06 Score=87.92 Aligned_cols=211 Identities=9% Similarity=0.051 Sum_probs=115.9 Template_Neff=11.500
34974
34975 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
34976 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
34977 +++||+++|.... .++.....+++.++++.+ +++.+.|...++. ...+.+++++
34978 T Consensus 2 ~~~Igvv~~~~~~------------~~~~~~~~g~~~a~~~~g----------~~l~~~~~~~~~~----~~~~~~~~l~ 55 (313)
34979 T 3MA0_C 2 EVKIGMAIDDLRL------------ERWQKDRDIFVKKAESLG----------AKVFVQSANGNEE----TQMSQIENMI 55 (313)
34980 T ss_dssp CCEEEEEECCSCS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCHH----HHHHHHHHHH
34981 T ss_pred CcEEEEEeCCCcc------------hHHHhhHHHHHHHHHHcC----------CEEEEEeCCCCHH----HHHHHHHHHH
34982 Confidence 5789999985422 245567778888777642 3444555443322 2233344433
34983
34984
34985 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
34986 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
34987 . .+++++|....... .......+...++|+|..+...+. .++.+++..++...+
34988 T Consensus 56 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~~~~ 110 (313)
34989 T 3MA0_C 56 N-------------------RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND------ADIDFYISFDNEKVG 110 (313)
34990 T ss_dssp H-------------------HTCSEEEECCSSTTSCHHHHHHHHHTTCEEEEESSCCTT------SCCSEEEEECHHHHH
34991 T ss_pred H-------------------CCCCEEEEecCCcchHHHHHHHHHHCCCEEEEECCCCCC------CCccEEEECCHHHHH
34992 Confidence 2 46777765433322 224445566789999987654321 234466777777777
34993
34994
34995 Q NP_000836.2 204 QAMVDIVTALG-WNYVSTLAS--EGNYGESGVEAFTQISREIG---GVCIAQSQKIPREPRPGEFEKIIKRLLET--PNA 275 (908)
34996 Q Consensus 204 ~~~~~~l~~~~-~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~---~i~v~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 275 (908)
34997 ..+++++.+.+ .++++++.. +..++..+.+++++.+++.+ .+.+....... ..+..+....++++++. .++
34998 T Consensus 111 ~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 189 (313)
34999 T 3MA0_C 111 ELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD-GWLPENALKIMENALTANNNKI 189 (313)
35000 T ss_dssp HHHHHHHHHHCCSEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEECG-GGCHHHHHHHHHHHHHHTTTCC
35001 T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCChhHHHHHHHHHHHHHHhHHcCCeEEEccccCC-CCCHHHHHHHHHHHHHHCCCCC
35002 Confidence 77888775544 345777764 23455667777877776642 02222111110 01112334445555421 357
35003
35004
35005 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
35006 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
35007 ++|++.. +..+..+++++++.|+..++.+++.
35008 T Consensus 190 d~i~~~~-~~~a~~~~~~~~~~g~~~~i~vig~ 221 (313)
35009 T 3MA0_C 190 DAVVASN-DATAGGAIQALSAQGLSGKVAISGQ 221 (313)
35010 T ss_dssp CEEEESS-HHHHHHHHHHHHTTTCTTTSEECCC
35011 T ss_pred CEEEECC-hHHHHHHHHHHHHCCCCCCcEEecC
35012 Confidence 7877664 4456677888887776323334433
35013
35014
35015 No 246
35016 >5IBQ_A Probable ribose ABC transporter, substrate-binding; ABC TRANSPORTER SOLUTE BINDING PROTEIN; HET: XXM; 1.2A {Rhizobium etli}
35017 Probab=96.97 E-value=1.6e-06 Score=87.77 Aligned_cols=217 Identities=10% Similarity=0.036 Sum_probs=115.8 Template_Neff=11.500
35018
35019 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSL 117 (908)
35020 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
35021 .....++..+||+++|..+. .++.....+++.++++.+ +++.+.+...++ +...
35022 T Consensus 17 ~~~~~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~ 70 (310)
35023 T 5IBQ_A 17 NLYFQSMADLIAIITPAHDN------------PFFKAEAVGAEAKAKELG----------YETLVMTHDDDA----NKQS 70 (310)
35024 T ss_dssp ------CCCEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHH
35025 T ss_pred ccceeeCCCEEEEEeCCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEEcCCCCH----HHHH
35026 Confidence 34556788999999997542 255667778888777642 334444443332 2223
35027
35028
35029 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVV 196 (908)
35030 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~ 196 (908)
35031 +.+++++. .+++++|+...... .......+.+.++|+|..+...+. ..++++++.
35032 T Consensus 71 ~~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~~v~ 126 (310)
35033 T 5IBQ_A 71 EMIDTAIG-------------------RGAKAIILDNAGADASVAAVKKAKDAGIPSFLIDREINA-----TGVAVAQIV 126 (310)
35034 T ss_dssp HHHHHHHH-------------------TTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEESSCCSC-----SSSSSEEEE
35035 T ss_pred HHHHHHHH-------------------CCCCEEEEeCCCchhhHHHHHHHHHCCCCEEEeCCCCCC-----CCCceEEEE
35036 Confidence 33343332 46787776443332 223344566789999987754321 123456677
35037
35038
35039 Q NP_000836.2 197 PPDSYQAQAMVDIVTALGWN--YVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE- 271 (908)
35040 Q Consensus 197 ~~~~~~~~~~~~~l~~~~~~--~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~- 271 (908)
35041 .+....++.+++++.+.+.+ +++++.. +..++..+.+++++.+++.+...+....... .+..+....++++++
35042 T Consensus 127 ~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ 204 (310)
35043 T 5IBQ_A 127 SNNYQGAQLGAQEFVKLMGEKGNYVELVGKESDTNAGIRSQGYHDVIDDYPEMKSVAKQSAN--WSQTEAYSKMETILQA 204 (310)
35044 T ss_dssp ECHHHHHHHHHHHHHHHTTTCEEEEEEECCTTSHHHHHHHHHHHHHHTTCTTEEEEEEEECT--TCHHHHHHHHHHHHHH
35045 T ss_pred cChHHHHHHHHHHHHHHhCCcceEEEEEcCCCChhHHHHHHHHHHHHHHCCCeEEEEEeeCC--CCHHHHHHHHHHHHHH
35046 Confidence 77777777888887654433 3555553 2344566777888877764212221111111 111223344455542
35047
35048
35049 Q NP_000836.2 272 TPNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
35050 Q Consensus 272 ~~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
35051 ..++++|++.. +..+..+++++++.|.. ++.+++.
35052 T Consensus 205 ~~~~~~i~~~~-~~~a~~~~~al~~~g~~-~i~vv~~ 239 (310)
35053 T 5IBQ_A 205 NPDIKGVISGN-DTMAMGAIAALQAAGRK-DVIVVGF 239 (310)
35054 T ss_dssp CCSCCEEEESS-HHHHHHHHHHHHHTTCT-TSEEECS
35055 T ss_pred CCCCCEEEECC-hHHHHHHHHHHHHCCCC-CcEEEEe
35056 Confidence 13577776654 44566777788777762 3344443
35057
35058
35059 No 247
35060 >3K9C_B Transcriptional regulator, LacI family protein; PSI-II, 11026W, LacI family protein; HET: GOL; 2.14A {Rhodococcus jostii}
35061 Probab=96.96 E-value=1.7e-06 Score=86.50 Aligned_cols=201 Identities=16% Similarity=0.153 Sum_probs=116.7 Template_Neff=11.800
35062
35063 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
35064 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
35065 ...++++||++.|.++ .++.....+++.++++.+ +++.+.++..+ . ...+.+
35066 T Consensus 8 ~~~~~~~I~~i~~~~~-------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~-~----~~~~~~ 59 (289)
35067 T 3K9C_B 8 RQASSRLLGVVFELQQ-------------PFHGDLVEQIYAAATRRG----------YDVMLSAVAPS-R----AEKVAV 59 (289)
35068 T ss_dssp -CCSSEEEEEEEETTC-------------HHHHHHHHHHHHHHHHTT----------EEEEEEEEBTT-B----CHHHHH
35069 T ss_pred hhCCCCeEEEEeCCCC-------------hhHHHHHHHHHHHHHHCC----------CeEEEEeCCCC-H----HHHHHH
35070 Confidence 3457899999987543 245667788888877653 23334443322 1 122333
35071
35072
35073 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
35074 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
35075 +++.. .++|++|+...+.....+ ..+ ..++|+|..+...+ .+..+.+..++.
35076 T Consensus 60 ~~l~~-------------------~~~d~ii~~~~~~~~~~~-~~~-~~~ipvv~~~~~~~-------~~~~~~v~~d~~ 111 (289)
35077 T 3K9C_B 60 QALMR-------------------ERCEAAILLGTRFDTDEL-GAL-ADRVPALVVARASG-------LPGVGAVRGDDV 111 (289)
35078 T ss_dssp HHHHT-------------------TTEEEEEEETCCCCHHHH-HHH-HTTSCEEEESSCCC-------STTSEEEEECHH
35079 T ss_pred HHHHh-------------------CCCCEEEEECCCCCHHHH-HHH-hcCCCEEEEeccCC-------CCCCcEEEeCcH
35080 Confidence 33332 478888876543332222 233 46899888765432 134566777777
35081
35082
35083 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASE-GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARAV 278 (908)
35084 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~-~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~vi 278 (908)
35085 ..++.+++++.+.+.++++++... +.++..+.++|++.+++. ++.+....... ..+..+....++++++. .++|+|
35086 T Consensus 112 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~i 189 (289)
35087 T 3K9C_B 112 AGITLAVDHLTELGHRNIAHIDGADAPGGADRRAGFLAAMDRH-GLSASATVVTG-GTTETEGAEGMHTLLEMPTPPTAV 189 (289)
35088 T ss_dssp HHHHHHHHHHHHTTCCSEEEEECTTSTTHHHHHHHHHHHHHHT-TCGGGEEEEEC-CSSHHHHHHHHHHHHHSSSCCSEE
35089 T ss_pred HHHHHHHHHHHHCCCCcEEEeeCCCCCChHHHHHHHHHHHHHc-CCCCCCcEEeC-CCChHHHHHHHHHHhcCCCCCCEE
35090 Confidence 777788888766678899999853 345667778888887764 34433211111 01112233445555421 247887
35091
35092
35093 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
35094 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
35095 ++.. +..+..+++++++.|+.
35096 T Consensus 190 ~~~~-~~~a~~~~~~l~~~g~~ 210 (289)
35097 T 3K9C_B 190 VAFN-DRCATGVLDLLVRSGRD 210 (289)
35098 T ss_dssp EESS-HHHHHHHHHHHHHTTCC
35099 T ss_pred EECC-HHHHHHHHHHHHHCCCC
35100 Confidence 7664 44566778888877764
35101
35102
35103 No 248
35104 >4RY8_B Periplasmic binding protein/LacI transcriptional regulator; SUGAR TRANSPORTER, ENZYME FUNCTION INITIATIVE; HET: SR1; 1.75A {Thermotoga lettingae TMO}
35105 Probab=96.95 E-value=1.7e-06 Score=88.41 Aligned_cols=215 Identities=9% Similarity=0.041 Sum_probs=118.1 Template_Neff=11.300
35106
35107 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
35108 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
35109 ...++.++||++.|..+. .++.....+++.++++.+ +++.+.+...++ +...+.
35110 T Consensus 10 ~~~~~~~~Igv~~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~ 63 (329)
35111 T 4RY8_B 10 FENPKNVRIALVREVGEG------------SFFERYLAGAQSMARELG----------VTLLEATAHGDM----ARMVTM 63 (329)
35112 T ss_dssp GGSGGGCEEEEEESCCCS------------HHHHHHHHHHHHHHHHHT----------CEEEEEECTTCH----HHHHHH
35113 T ss_pred cCCCCCcEEEEEEeCCCC------------hHHHHHHHHHHHHHHHhC----------CEEEEEeCCCCH----HHHHHH
35114 Confidence 456678999999997542 245667778888877642 334444543332 122333
35115
35116
35117 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
35118 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
35119 +++++. ++++++|+...+.. .......+...++|+|..+...+ .+.++.+.++
35120 T Consensus 64 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d 117 (329)
35121 T 4RY8_B 64 IENFIT-------------------QRVDAIIIDHGRPDPLMPKIKEALDRGIRVVTFDLVVD-------DNRVPEIEQD 117 (329)
35122 T ss_dssp HHHHHH-------------------TTCSEEEEESCCHHHHHHHHHHHHHHTCEEEEESCCCS-------CTTSCEEECC
35123 T ss_pred HHHHHh-------------------cCCCEEEECCCCccccHHHHHHHHHCCCEEEEECCCCC-------CCCCcEEecC
35124 Confidence 443332 47887776443332 22344556778999998776432 2345667777
35125
35126
35127 Q NP_000836.2 199 DSYQAQAMVDIVTA--LGWNYVSTLASEGNYGESGVEAFTQISREI-GGVCIAQSQK-IPREPRPGEFEKIIKRLLE-TP 273 (908)
35128 Q Consensus 199 ~~~~~~~~~~~l~~--~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-~~i~v~~~~~-~~~~~~~~~~~~~~~~l~~-~~ 273 (908)
35129 ....++.+++++.+ .+.++++++..+..++......+.+.+.+. .++.+..... ... .+..+....++++++ ..
35130 T Consensus 118 ~~~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~ 196 (329)
35131 T 4RY8_B 118 DLLIGYLISKQLAVDFAGNANVIYVNVGGFAPLDKRDKMWQIIKWRFPGIKEVAKIGAVTG-STAADTQTRMEAAMKEKP 196 (329)
35132 T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEECCSSSHHHHHHHHHHHHHHHHCTTEEEEEEECCCCS-SHHHHHHHHHHHHHHHCT
35133 T ss_pred hHHHHHHHHHHHHHHcCCCceEEEEEcCCCccHHHHHHHHHHHHHHCCCcEEEEEEcCCCC-CCHHHHHHHHHHHHHHCC
35134 Confidence 77777788877755 577899998754434433444444444331 1233321110 110 111233344555542 12
35135
35136
35137 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
35138 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
35139 ++++|++.. +..+..+++++++.|+..++.+++.
35140 T Consensus 197 ~~~~I~~~~-~~~a~~~~~al~~~g~~~~v~v~~~ 230 (329)
35141 T 4RY8_B 197 EANAVLAMW-DEFAKGAVRAIMQAGKSDQFKVYSV 230 (329)
35142 T ss_dssp TCCEEEESS-HHHHHHHHHHHHHHTCGGGCEEEEE
35143 T ss_pred CCCEEEEcC-hHHHHHHHHHHHHcCCCCceEEEEe
35144 Confidence 467776553 4456678888887776423334443
35145
35146
35147 No 249
35148 >4RY8_C Periplasmic binding protein/LacI transcriptional regulator; SUGAR TRANSPORTER, ENZYME FUNCTION INITIATIVE; HET: SR1; 1.75A {Thermotoga lettingae TMO}
35149 Probab=96.95 E-value=1.7e-06 Score=88.41 Aligned_cols=215 Identities=9% Similarity=0.041 Sum_probs=117.0 Template_Neff=11.300
35150
35151 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
35152 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
35153 ...++.++||++.|..+. .++.....+++.++++.+ +++.+.+...++ +...+.
35154 T Consensus 10 ~~~~~~~~Igv~~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~ 63 (329)
35155 T 4RY8_C 10 FENPKNVRIALVREVGEG------------SFFERYLAGAQSMARELG----------VTLLEATAHGDM----ARMVTM 63 (329)
35156 T ss_dssp C--CTTCEEEEEESCCCS------------HHHHHHHHHHHHHHHHHT----------CEEEEEECTTCH----HHHHHH
35157 T ss_pred cCCCCCcEEEEEEeCCCC------------hHHHHHHHHHHHHHHHhC----------CEEEEEeCCCCH----HHHHHH
35158 Confidence 456678999999997542 245667778888877642 334444543332 122333
35159
35160
35161 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
35162 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
35163 +++++. ++++++|+...+.. .......+...++|+|..+...+ .+.++.+.++
35164 T Consensus 64 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d 117 (329)
35165 T 4RY8_C 64 IENFIT-------------------QRVDAIIIDHGRPDPLMPKIKEALDRGIRVVTFDLVVD-------DNRVPEIEQD 117 (329)
35166 T ss_dssp HHHHHH-------------------TTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEESCCCS-------CTTSCEEECC
35167 T ss_pred HHHHHh-------------------cCCCEEEECCCCccccHHHHHHHHHCCCEEEEECCCCC-------CCCCcEEecC
35168 Confidence 443332 47887776443332 22344556778999998776432 2345667777
35169
35170
35171 Q NP_000836.2 199 DSYQAQAMVDIVTA--LGWNYVSTLASEGNYGESGVEAFTQISREI-GGVCIAQSQK-IPREPRPGEFEKIIKRLLE-TP 273 (908)
35172 Q Consensus 199 ~~~~~~~~~~~l~~--~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~-~~i~v~~~~~-~~~~~~~~~~~~~~~~l~~-~~ 273 (908)
35173 ....++.+++++.+ .+.++++++..+..++......+.+.+.+. .++.+..... ... .+..+....++++++ ..
35174 T Consensus 118 ~~~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~ 196 (329)
35175 T 4RY8_C 118 DLLIGYLISKQLAVDFAGNANVIYVNVGGFAPLDKRDKMWQIIKWRFPGIKEVAKIGAVTG-STAADTQTRMEAAMKEKP 196 (329)
35176 T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHHHHHHHCTTEEEEEEECCCCS-SHHHHHHHHHHHHHHHCT
35177 T ss_pred hHHHHHHHHHHHHHHcCCCceEEEEEcCCCccHHHHHHHHHHHHHHCCCcEEEEEEcCCCC-CCHHHHHHHHHHHHHHCC
35178 Confidence 77777788877755 577899998754434433444444444331 1233321110 110 111233344555542 12
35179
35180
35181 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
35182 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
35183 ++++|++.. +..+..+++++++.|+..++.+++.
35184 T Consensus 197 ~~~~I~~~~-~~~a~~~~~al~~~g~~~~v~v~~~ 230 (329)
35185 T 4RY8_C 197 EANAVLAMW-DEFAKGAVRAIMQAGKSDQFKVYSV 230 (329)
35186 T ss_dssp TCCEEEESS-HHHHHHHHHHHHHHTCGGGCEEEEE
35187 T ss_pred CCCEEEEcC-hHHHHHHHHHHHHcCCCCceEEEEe
35188 Confidence 467776553 4456678888887776423334443
35189
35190
35191 No 250
35192 >3ROT_A ABC sugar transporter, periplasmic sugar; NYSGRC, PSI-BIOLOGY, Structural Genomics, New; HET: GOL; 1.91A {Legionella pneumophila subsp. pneumophila}
35193 Probab=96.93 E-value=1.9e-06 Score=86.61 Aligned_cols=205 Identities=8% Similarity=0.085 Sum_probs=118.1 Template_Neff=11.400
35194
35195 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
35196 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
35197 .+++||++.|.... .++.....+++.++++. |+++.+...|+..++ +...+.++++
35198 T Consensus 2 ~~~~I~vi~~~~~~------------~~~~~~~~g~~~a~~~~--------g~~v~~~~~~~~~~~----~~~~~~~~~l 57 (297)
35199 T 3ROT_A 2 VRDKYYLITHGSQD------------PYWTSLFQGAKKAAEEL--------KVDLQILAPPGANDV----PKQVQFIESA 57 (297)
35200 T ss_dssp -CCEEEEECSCCCS------------HHHHHHHHHHHHHHHHH--------TCEEEEECCSSSCCH----HHHHHHHHHH
35201 T ss_pred CCcEEEEEccCCCC------------HHHHHHHHHHHHHHHHh--------CCEEEEECCCCCCCH----HHHHHHHHHH
35202 Confidence 46789999985332 24566778888888775 345655555433332 2233344443
35203
35204
35205 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAA-ASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
35206 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~-~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
35207 +. .+++++|+.. .+.........+...++|+|..+...+... ..++++++.+++...
35208 T Consensus 58 ~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~---~~~~~~~v~~d~~~~ 115 (297)
35209 T 3ROT_A 58 LA-------------------TYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKT---KNPYLVFLGSDNLLA 115 (297)
35210 T ss_dssp HH-------------------TCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCCSCTT---TSCCSCEEECCHHHH
35211 T ss_pred HH-------------------hCCCEEEEeCCChHHHHHHHHHHHHCCCCEEEEcCCCCCCC---CCCceeEEeCChHHH
35212 Confidence 32 4788777643 222222445556678999998776543211 124567777777777
35213
35214
35215 Q NP_000836.2 203 AQAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
35216 Q Consensus 203 ~~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
35217 ++.+++++.+. +.++++++.. ++.++..+.+++++.+++. ++.+... ... .+..+....+++++.. .++++
35218 T Consensus 116 ~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~ 191 (297)
35219 T 3ROT_A 116 GKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDK-GIFFEEL-DVG--TDPNQVQSRVKSYFKIHPETNI 191 (297)
35220 T ss_dssp HHHHHHHHHHHCTTCCEEEEEESCTTCHHHHHHHHHHHHHHHHT-TCEEEEE-ECC--SCHHHHHHHHHHHHHHCTTCCE
35221 T ss_pred HHHHHHHHHHhCCCCCeEEEEcCCCCchhHHHHHHHHHHHHHhc-CCeEEEE-eCC--CCHHHHHHHHHHHHHHCCCccE
35222 Confidence 88888887665 6789999975 3345667778888888765 3444321 111 1122333445555421 23566
35223
35224
35225 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQ 299 (908)
35226 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~ 299 (908)
35227 |++.. +..+..+++++++.|.
35228 T Consensus 192 i~~~~-~~~a~~~~~~~~~~g~ 212 (297)
35229 T 3ROT_A 192 IFCLT-SQALDPLGQMLLHPDR 212 (297)
35230 T ss_dssp EEESS-HHHHHHHHHHHHSHHH
35231 T ss_pred EEECC-hhhhHHHHHHhhCCCC
35232 Confidence 65553 3445566666666553
35233
35234
35235 No 251
35236 >3ROT_B ABC sugar transporter, periplasmic sugar; NYSGRC, PSI-BIOLOGY, Structural Genomics, New; HET: MSE, GOL; 1.91A {Legionella pneumophila subsp. pneumophila}
35237 Probab=96.93 E-value=1.9e-06 Score=86.61 Aligned_cols=205 Identities=8% Similarity=0.085 Sum_probs=118.1 Template_Neff=11.400
35238
35239 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
35240 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
35241 .+++||++.|.... .++.....+++.++++. |+++.+...|+..++ +...+.++++
35242 T Consensus 2 ~~~~I~vi~~~~~~------------~~~~~~~~g~~~a~~~~--------g~~v~~~~~~~~~~~----~~~~~~~~~l 57 (297)
35243 T 3ROT_B 2 VRDKYYLITHGSQD------------PYWTSLFQGAKKAAEEL--------KVDLQILAPPGANDV----PKQVQFIESA 57 (297)
35244 T ss_dssp -CCEEEEECSCCSS------------HHHHHHHHHHHHHHHHH--------TCEEEEECCSSSCCH----HHHHHHHHHH
35245 T ss_pred CCcEEEEEccCCCC------------HHHHHHHHHHHHHHHHh--------CCEEEEECCCCCCCH----HHHHHHHHHH
35246 Confidence 46789999985332 24566778888888775 345655555433332 2233344443
35247
35248
35249 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAA-ASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
35250 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~-~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
35251 +. .+++++|+.. .+.........+...++|+|..+...+... ..++++++.+++...
35252 T Consensus 58 ~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~---~~~~~~~v~~d~~~~ 115 (297)
35253 T 3ROT_B 58 LA-------------------TYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKT---KNPYLVFLGSDNLLA 115 (297)
35254 T ss_dssp HT-------------------TCCSEEEECCCCSSSSHHHHHHHHHTTCCEEEESCCCSCTT---TSCCSCEEECCHHHH
35255 T ss_pred HH-------------------hCCCEEEEeCCChHHHHHHHHHHHHCCCCEEEEcCCCCCCC---CCCceeEEeCChHHH
35256 Confidence 32 4788777643 222222445556678999998776543211 124567777777777
35257
35258
35259 Q NP_000836.2 203 AQAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARA 277 (908)
35260 Q Consensus 203 ~~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~v 277 (908)
35261 ++.+++++.+. +.++++++.. ++.++..+.+++++.+++. ++.+... ... .+..+....+++++.. .++++
35262 T Consensus 116 ~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~ 191 (297)
35263 T 3ROT_B 116 GKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDK-GIFFEEL-DVG--TDPNQVQSRVKSYFKIHPETNI 191 (297)
35264 T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSTTCHHHHHHHHHHHHHHHHT-TCEEEEE-ECC--SCHHHHHHHHHHHHHHCTTCCE
35265 T ss_pred HHHHHHHHHHhCCCCCeEEEEcCCCCchhHHHHHHHHHHHHHhc-CCeEEEE-eCC--CCHHHHHHHHHHHHHHCCCccE
35266 Confidence 88888887665 6789999975 3345667778888888765 3444321 111 1122333445555421 23566
35267
35268
35269 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQ 299 (908)
35270 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~ 299 (908)
35271 |++.. +..+..+++++++.|.
35272 T Consensus 192 i~~~~-~~~a~~~~~~~~~~g~ 212 (297)
35273 T 3ROT_B 192 IFCLT-SQALDPLGQMLLHPDR 212 (297)
35274 T ss_dssp EEESS-HHHHHHHHHHHHSHHH
35275 T ss_pred EEECC-hhhhHHHHHHhhCCCC
35276 Confidence 65553 3445566666666553
35277
35278
35279 No 252
35280 >5BRA_A Putative periplasmic binding protein with; Periplasmic solute binding Protein, ENZYME; HET: MSE; 2.971A {Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)}
35281 Probab=96.93 E-value=1.9e-06 Score=89.01 Aligned_cols=220 Identities=8% Similarity=-0.032 Sum_probs=122.4 Template_Neff=10.800
35282
35283 Q NP_000836.2 37 AHSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQS 116 (908)
35284 Q Consensus 37 ~~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~ 116 (908)
35285 .......+.++||++.|..+. .++.....+++.++++.+ +++.+...+. .++ +..
35286 T Consensus 36 ~~~~~~~~~~~Igvv~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~v~~~~~~~-~~~----~~~ 90 (350)
35287 T 5BRA_A 36 LITTANDKKYTIATVVKVDGI------------AWFDRMRDGVDQFKADTG--------NDVWMVGPSQ-ADA----AAQ 90 (350)
35288 T ss_pred HHHhhcCCCeEEEEEeCCCCC------------HHHHHHHHHHHHHHHHhC--------CEEEEEeCCC-CCH----HHH
35289 Confidence 344556788999999997542 255677888888887763 3444432222 222 223
35290
35291
35292 Q NP_000836.2 117 LTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRV 195 (908)
35293 Q Consensus 117 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~ 195 (908)
35294 .+.+++++. .+++++|+...+.. .......+.+.++|+|..+...+. ...++++
35295 T Consensus 91 ~~~~~~l~~-------------------~~~d~iI~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v 145 (350)
35296 T 5BRA_A 91 VQIVENLIA-------------------QGVDAIAIVPFSVEAVEPVLKKARERGIVVISHEASNIQ------NVDYDIE 145 (350)
35297 T ss_pred HHHHHHHHH-------------------CCCCEEEECCCChHHHHHHHHHHHHCCCCEEEeCCCCCC------CCCeEEE
35298 Confidence 334444332 47888776543322 224455667789999877654321 1334556
35299
35300
35301 Q NP_000836.2 196 VPPDSYQAQAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREIG-GVCIAQSQKIPREPRPGEFEKIIKRLL 270 (908)
35302 Q Consensus 196 ~~~~~~~~~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~l~ 270 (908)
35303 .+++...+..+++++.+. +.++++++.. ++.++..+.+++++.+++.+ ++.+.... .....+..+....+++++
35304 T Consensus 146 ~~d~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l 224 (350)
35305 T 5BRA_A 146 AFDNKAYGANLMKELGKSMGGKGKYVTTVGSLTSKSQMEWIDGAVEYQKANFPEMSEATGR-LETYDDANTDYNKLKEAM 224 (350)
35306 T ss_pred CCCHHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCeEEEEee-cCCCCCHHHHHHHHHHHH
35307 Confidence 667666677777777543 5788999885 34456667778887776531 13322110 000011123334455554
35308
35309
35310 Q NP_000836.2 271 ET-PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
35311 Q Consensus 271 ~~-~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
35312 +. .++++|++.. +..+..+++++++.|+..++.+++.
35313 T Consensus 225 ~~~~~~~~i~~~~-~~~a~~~~~al~~~g~~~~v~v~g~ 262 (350)
35314 T 5BRA_A 225 TAYPDITGILGAP-MPTSAGAGRLIAEGGLKGKVFFAGT 262 (350)
35315 T ss_pred HHCCCCCEEEEcC-hhHHHHHHHHHHHCCCCCCeEEEEe
35316 Confidence 21 2456665543 4456678888888776423344443
35317
35318
35319 No 253
35320 >2H3H_A Sugar ABC transporter, periplasmic sugar-binding; glucose binding protein, periplasmic binding; HET: BGC; 1.7A {Thermotoga maritima}
35321 Probab=96.93 E-value=1.9e-06 Score=87.35 Aligned_cols=209 Identities=10% Similarity=0.057 Sum_probs=113.2 Template_Neff=11.300
35322
35323 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
35324 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
35325 +++||++.|.+. .++.....+++.++++.+ +++.+...+ ..++ +...+.+++++
35326 T Consensus 1 ~~~Ig~i~~~~~-------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~-~~~~----~~~~~~~~~l~ 54 (313)
35327 T 2H3H_A 1 MLTIGVIGKSVH-------------PYWSQVEQGVKAAGKALG--------VDTKFFVPQ-KEDI----NAQLQMLESFI 54 (313)
35328 T ss_dssp CCEEEEECSCSS-------------HHHHHHHHHHHHHHHHHT--------CEEEEECCS-SSCH----HHHHHHHHHHH
35329 T ss_pred CeEEEEEcCCCC-------------hHHHHHHHHHHHHHHHhC--------CEEEEECCC-ccCH----HHHHHHHHHHH
35330 Confidence 367899998642 245667788888887753 333332211 1221 12233344333
35331
35332
35333 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
35334 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
35335 . .+++++|+...+... ......+...++|+|..+...+. .++++++.+++...+
35336 T Consensus 55 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~~~~ 109 (313)
35337 T 2H3H_A 55 A-------------------EGVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLDTDSPD------SGRYVYIGTDNYQAG 109 (313)
35338 T ss_dssp H-------------------TTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCTT------SCCSCEEECCHHHHH
35339 T ss_pred H-------------------cCCCEEEECCCChHhhHHHHHHHHHCCCCEEEECCCCCC------CCcceEEeCChHHHH
35340 Confidence 2 477877764433322 23445567789999887654321 234566777777777
35341
35342
35343 Q NP_000836.2 204 QAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAV 278 (908)
35344 Q Consensus 204 ~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vi 278 (908)
35345 +.+++++.+. +.++++++.. ++.++..+.++|.+.+++. ++.+....... .+..+....++++++ ..++++|
35346 T Consensus 110 ~~~~~~l~~~~~g~~~i~~~~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~ai 186 (313)
35347 T 2H3H_A 110 YTAGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIKDS-EIEIVDILNDE--EDGARAVSLAEAALNAHPDLDAF 186 (313)
35348 T ss_dssp HHHHHHHHHHHTSCSEEEEEESCSSCHHHHHHHHHHHHHHTTS-SCEEEEEEECS--SCHHHHHHHHHHHHHHCTTCCEE
35349 T ss_pred HHHHHHHHHHhCCCeEEEEEeCCCCchHHHHHHHHHHHHHhcC-CcEEEEEEcCC--CCHHHHHHHHHHHHHHCCCCCEE
35350 Confidence 7888877654 6788988875 3345667788888887764 34433211111 111122333445442 1257777
35351
35352
35353 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
35354 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
35355 ++... .....++.++++.+...++.+++.
35356 T Consensus 187 ~~~~~-~~~~~~~~~~~~~~~~~~v~iig~ 215 (313)
35357 T 2H3H_A 187 FGVYA-YNGPAQALVVKNAGKVGKVKIVCF 215 (313)
35358 T ss_dssp EECST-THHHHHHHHHHHTTCTTTSEEEEE
35359 T ss_pred EEcCC-CChHHHHHHHHHCCCCCCeEEEEe
35360 Confidence 66542 233444555555554323334433
35361
35362
35363 No 254
35364 >2H3H_B Sugar ABC transporter, periplasmic sugar-binding; glucose binding protein, periplasmic binding; HET: BGC; 1.7A {Thermotoga maritima}
35365 Probab=96.93 E-value=1.9e-06 Score=87.35 Aligned_cols=209 Identities=10% Similarity=0.057 Sum_probs=113.2 Template_Neff=11.300
35366
35367 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
35368 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
35369 +++||++.|.+. .++.....+++.++++.+ +++.+...+ ..++ +...+.+++++
35370 T Consensus 1 ~~~Ig~i~~~~~-------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~-~~~~----~~~~~~~~~l~ 54 (313)
35371 T 2H3H_B 1 MLTIGVIGKSVH-------------PYWSQVEQGVKAAGKALG--------VDTKFFVPQ-KEDI----NAQLQMLESFI 54 (313)
35372 T ss_dssp CCEEEEECSCSS-------------HHHHHHHHHHHHHHHHHT--------CEEEEECCS-SCCH----HHHHHHHHHHH
35373 T ss_pred CeEEEEEcCCCC-------------hHHHHHHHHHHHHHHHhC--------CEEEEECCC-ccCH----HHHHHHHHHHH
35374 Confidence 367899998642 245667788888887753 333332211 1221 12233344333
35375
35376
35377 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
35378 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
35379 . .+++++|+...+... ......+...++|+|..+...+. .++++++.+++...+
35380 T Consensus 55 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~~~~ 109 (313)
35381 T 2H3H_B 55 A-------------------EGVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLDTDSPD------SGRYVYIGTDNYQAG 109 (313)
35382 T ss_dssp H-------------------HTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCTT------SCCSCEEECCHHHHH
35383 T ss_pred H-------------------cCCCEEEECCCChHhhHHHHHHHHHCCCCEEEECCCCCC------CCcceEEeCChHHHH
35384 Confidence 2 477877764433322 23445567789999887654321 234566777777777
35385
35386
35387 Q NP_000836.2 204 QAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAV 278 (908)
35388 Q Consensus 204 ~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vi 278 (908)
35389 +.+++++.+. +.++++++.. ++.++..+.++|.+.+++. ++.+....... .+..+....++++++ ..++++|
35390 T Consensus 110 ~~~~~~l~~~~~g~~~i~~~~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~ai 186 (313)
35391 T 2H3H_B 110 YTAGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIKDS-EIEIVDILNDE--EDGARAVSLAEAALNAHPDLDAF 186 (313)
35392 T ss_dssp HHHHHHHHHHTTTEEEEEEEESCSSSHHHHHHHHHHHHHTTTS-EEEEEEEEECS--SCHHHHHHHHHHHHHHCTTCCEE
35393 T ss_pred HHHHHHHHHHhCCCeEEEEEeCCCCchHHHHHHHHHHHHHhcC-CcEEEEEEcCC--CCHHHHHHHHHHHHHHCCCCCEE
35394 Confidence 7888877654 6788988875 3345667788888887764 34433211111 111122333445442 1257777
35395
35396
35397 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
35398 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
35399 ++... .....++.++++.+...++.+++.
35400 T Consensus 187 ~~~~~-~~~~~~~~~~~~~~~~~~v~iig~ 215 (313)
35401 T 2H3H_B 187 FGVYA-YNGPAQALVVKNAGKVGKVKIVCF 215 (313)
35402 T ss_dssp EECST-THHHHHHHHHHHTTCBTTBEEEEE
35403 T ss_pred EEcCC-CChHHHHHHHHHCCCCCCeEEEEe
35404 Confidence 66542 233444555555554323334433
35405
35406
35407 No 255
35408 >3GBV_A Putative LacI-family transcriptional regulator; NYSGXRC, PSI-II, 11231j, transcriptional regulator; HET: EDO; 2.2A {Bacteroides fragilis}
35409 Probab=96.93 E-value=1.9e-06 Score=86.77 Aligned_cols=155 Identities=18% Similarity=0.140 Sum_probs=94.8 Template_Neff=11.800
35410
35411 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
35412 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
35413 .++.++||++.|.+... .++.....+++.++++.|.. +.++++...|.. ++ ....+.++
35414 T Consensus 5 ~~~~~~Ig~i~~~~~~~-----------~~~~~~~~g~~~~~~~~~~~-----~~~i~~~~~~~~-~~----~~~~~~~~ 63 (304)
35415 T 3GBV_A 5 SNKKYTFACLLPKHLEG-----------EYWTDVQKGIREAVTTYSDF-----NISANITHYDPY-DY----NSFVATSQ 63 (304)
35416 T ss_dssp --CCEEEEEEEECCCTT-----------SHHHHHHHHHHHHHHHTGGG-----CEEEEEEEECSS-CH----HHHHHHHH
35417 T ss_pred cCCCeEEEEEccccCCC-----------hhHHHHHHHHHHHHHhhhhc-----CeEEEEecCCCC-CH----HHHHHHHH
35418 Confidence 45789999999864321 25567888999998887632 234444444432 22 22233344
35419
35420
35421 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
35422 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
35423 +++. +++|++|....+.. .......+...++|+|..+...+. .++++.+.++..
35424 T Consensus 64 ~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~ 118 (304)
35425 T 3GBV_A 64 AVIE-------------------EQPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDSQIKD------APPLAFFGQNSH 118 (304)
35426 T ss_dssp HHHT-------------------TCCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESSCCTT------SCCSEEEECCHH
35427 T ss_pred HHHH-------------------hCCCEEEECCCChhhhHHHHHHHHHcCCCEEEEcCCCCC------CCCcEEEcCChH
35428 Confidence 4332 46787765433322 223345566789999987764431 235667777777
35429
35430
35431 Q NP_000836.2 201 YQAQAMVDIVTAL--GWNYVSTLAS------EGNYGESGVEAFTQISREI 242 (908)
35432 Q Consensus 201 ~~~~~~~~~l~~~--~~~~v~ii~~------~~~~~~~~~~~~~~~~~~~ 242 (908)
35433 ..++.+++++.+. +.++++++.. +..++..+.+++++.+++.
35434 T Consensus 119 ~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
35435 T 3GBV_A 119 QSGYFAARMLMLLAVNDREIVIFRKIHEGVIGSNQQESREIGFRQYMQEH 168 (304)
35436 T ss_dssp HHHHHHHHHHHHHSTTCSEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHH
35437 T ss_pred HHHHHHHHHHHHHccCCCeEEEEEeccCCCCCChHHHHHHHHHHHHHHHH
35438 Confidence 7788888887654 7789999873 2345566778888877664
35439
35440
35441 No 256
35442 >3HUU_A Transcription regulator like protein; PSI-II, NYSGXRC, 11235m, transcription regulator; 1.95A {Staphylococcus haemolyticus}
35443 Probab=96.89 E-value=2.3e-06 Score=86.17 Aligned_cols=205 Identities=13% Similarity=0.116 Sum_probs=115.7 Template_Neff=11.800
35444
35445 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
35446 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
35447 ..++..+||++.|.++.... ...++.....+++.++++.+ + ++.+.+...++ +...+.+
35448 T Consensus 18 ~~~~~~~Ig~i~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~~ 76 (305)
35449 T 3HUU_A 18 ITNKTLTIGLIQKSSAPEIR-------QNPFNSDVLNGINQACNVRG--------Y--STRMTVSENSG----DLYHEVK 76 (305)
35450 T ss_dssp ---CCCEEEEECSCCSHHHH-------TSHHHHHHHHHHHHHHHHHT--------C--EEEECCCSSHH----HHHHHHH
35451 T ss_pred HcCCCcEEEEEEcCCChhHh-------cCccHHHHHHHHHHHHHHhC--------C--eEEEEEcCCCc----chHHHHH
35452 Confidence 34678999999987642100 01345667788888777642 3 33334433321 1222233
35453
35454
35455 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
35456 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
35457 +.+.. +++|++|+...+.. ......+...++|+|..+...+ .+.++++.++..
35458 T Consensus 77 ~~~~~-------------------~~~d~ii~~~~~~~-~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~ 129 (305)
35459 T 3HUU_A 77 TMIQS-------------------KSVDGFILLYSLKD-DPIEHLLNEFKVPYLIVGKSLN-------YENIIHIDNDNI 129 (305)
35460 T ss_dssp HHHHT-------------------TCCSEEEESSCBTT-CHHHHHHHHTTCCEEEESCCCS-------STTCCEEECCHH
35461 T ss_pred HHHHh-------------------CCCCEEEEeccCCC-ChHHHHHHHcCCCEEEECCCCC-------CCCCcEEecChH
35462 Confidence 32221 47888886554433 2445566778999998765432 134566777777
35463
35464
35465 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLL--ETPNAR 276 (908)
35466 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~ 276 (908)
35467 ..++.+++++.+.+.++++++..... ....+.++|++.+++. ++.+.... .. +..+....+++++ ...++|
35468 T Consensus 130 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~d 204 (305)
35469 T 3HUU_A 130 DAAYQLTQYLYHLGHRHILFLQESGHYAVTEDRSVGFKQYCDDV-KISNDCVV-IK---SMNDLRDFIKQYCIDASHMPS 204 (305)
35470 T ss_dssp HHHHHHHHHHHHTTCCSEEEEEESSCBHHHHHHHHHHHHHHHHT-TCCCCEEE-EC---SHHHHHHHC--------CCCS
35471 T ss_pred HHHHHHHHHHHHcCCCeEEEEeCCCCchhHHHHHHHHHHHHHHc-CCCcceEE-Ec---chhhHHHHHHHHHHHcCCCCc
35472 Confidence 77888888887678889999985432 3466778888887764 34332111 11 1123334444442 123678
35473
35474
35475 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQ 299 (908)
35476 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
35477 +|++.. +..+..+++++++.|+
35478 T Consensus 205 ~i~~~~-~~~a~~~~~~l~~~g~ 226 (305)
35479 T 3HUU_A 205 VIITSD-VMLNMQLLNVLYEYQL 226 (305)
35480 T ss_dssp EEEESS-HHHHHHHHHHHHHTTC
35481 T ss_pred EEEECC-HHHHHHHHHHHHHcCC
35482 Confidence 775553 4456778888887776
35483
35484
35485 No 257
35486 >3HUU_C Transcription regulator like protein; PSI-II, NYSGXRC, 11235m, transcription regulator; 1.95A {Staphylococcus haemolyticus}
35487 Probab=96.89 E-value=2.3e-06 Score=86.17 Aligned_cols=205 Identities=13% Similarity=0.116 Sum_probs=116.7 Template_Neff=11.800
35488
35489 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
35490 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
35491 ..++..+||++.|.++.... ...++.....+++.++++.+ + ++.+.+...++ +...+.+
35492 T Consensus 18 ~~~~~~~Ig~i~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~~ 76 (305)
35493 T 3HUU_C 18 ITNKTLTIGLIQKSSAPEIR-------QNPFNSDVLNGINQACNVRG--------Y--STRMTVSENSG----DLYHEVK 76 (305)
35494 T ss_dssp ---CCCEEEEECSCCCHHHH-------TSHHHHHHHHHHHHHHHHTT--------C--EEEECCCSSHH----HHHHHHH
35495 T ss_pred HcCCCcEEEEEEcCCChhHh-------cCccHHHHHHHHHHHHHHhC--------C--eEEEEEcCCCc----chHHHHH
35496 Confidence 34678999999987642100 01345667788888777642 3 33334433321 1222233
35497
35498
35499 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
35500 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
35501 +.+.. +++|++|+...+.. ......+...++|+|..+...+ .+.++++.++..
35502 T Consensus 77 ~~~~~-------------------~~~d~ii~~~~~~~-~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~ 129 (305)
35503 T 3HUU_C 77 TMIQS-------------------KSVDGFILLYSLKD-DPIEHLLNEFKVPYLIVGKSLN-------YENIIHIDNDNI 129 (305)
35504 T ss_dssp HHHHT-------------------TCCSEEEESSCBTT-CHHHHHHHHTTCCEEEESCCCS-------CSSCCEEECCHH
35505 T ss_pred HHHHh-------------------CCCCEEEEeccCCC-ChHHHHHHHcCCCEEEECCCCC-------CCCCcEEecChH
35506 Confidence 32221 47888886554433 2445566778999998765432 134566777777
35507
35508
35509 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLL--ETPNAR 276 (908)
35510 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~ 276 (908)
35511 ..++.+++++.+.+.++++++..... ....+.++|++.+++. ++.+.... .. +..+....+++++ ...++|
35512 T Consensus 130 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~d 204 (305)
35513 T 3HUU_C 130 DAAYQLTQYLYHLGHRHILFLQESGHYAVTEDRSVGFKQYCDDV-KISNDCVV-IK---SMNDLRDFIKQYCIDASHMPS 204 (305)
35514 T ss_dssp HHHHHHHHHHHHHTCCCEEEEEESSCBHHHHHHHHHHHHHHHHT-TCCCCEEE-EC---SHHHHHHHHTTC------CCS
35515 T ss_pred HHHHHHHHHHHHcCCCeEEEEeCCCCchhHHHHHHHHHHHHHHc-CCCcceEE-Ec---chhhHHHHHHHHHHHcCCCCc
35516 Confidence 77888888887678889999985432 3466778888887764 34332111 11 1123334444442 123678
35517
35518
35519 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQ 299 (908)
35520 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
35521 +|++.. +..+..+++++++.|+
35522 T Consensus 205 ~i~~~~-~~~a~~~~~~l~~~g~ 226 (305)
35523 T 3HUU_C 205 VIITSD-VMLNMQLLNVLYEYQL 226 (305)
35524 T ss_dssp EEEESS-HHHHHHHHHHHHHTTC
35525 T ss_pred EEEECC-HHHHHHHHHHHHHcCC
35526 Confidence 775553 4456778888887776
35527
35528
35529 No 258
35530 >3KKE_C LacI family Transcriptional regulator; STRUCTURAL GENOMICS, TRANSCRIPTION, DNA-binding, Transcription; HET: ACT; 2.2A {Mycobacterium smegmatis str. MC2 155}
35531 Probab=96.87 E-value=2.5e-06 Score=85.91 Aligned_cols=205 Identities=12% Similarity=0.124 Sum_probs=117.5 Template_Neff=11.700
35532
35533 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
35534 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
35535 ...++..+||++.|..+. .++..+..+++.++++. |++ +.+.+.. +. ....+.
35536 T Consensus 10 l~~~~~~~I~~v~~~~~~------------~~~~~~~~~~~~~~~~~--------g~~--~~~~~~~-~~----~~~~~~ 62 (303)
35537 T 3KKE_C 10 LRHSRSGTIGLIVPDVNN------------AVFADMFSGVQMAASGH--------STD--VLLGQID-AP----PRGTQQ 62 (303)
35538 T ss_dssp CCTTCSCEEEEECSCTTS------------TTHHHHHHHHHHHHHHT--------TCE--EEEECCC-ST----THHHHH
35539 T ss_pred HhcCCCCEEEEEeCCCCC------------HHHHHHHHHHHHHHhcC--------CCE--EEEEeCC-CC----hhHHHH
35540 Confidence 345678999999987542 24566777887777664 233 3333322 21 112223
35541
35542
35543 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
35544 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
35545 +.+++. ..++|++|+...+.........+ ..++|+|..+...+ +..+.+..++
35546 T Consensus 63 ~~~~~~------------------~~~~d~ii~~~~~~~~~~~~~~~-~~~ipvv~~~~~~~--------~~~~~v~~d~ 115 (303)
35547 T 3KKE_C 63 LSRLVS------------------EGRVDGVLLQRREDFDDDMLAAV-LEGVPAVTINSRVP--------GRVGSVILDD 115 (303)
35548 T ss_dssp HHHHHH------------------TTSCSEEEEECCTTCCHHHHHHH-HTTSCEEEESCCCT--------TSCCEEEECH
35549 T ss_pred HHHHHH------------------cCCCCEEEEeccccCCHHHHHHH-HhCCCEEEeCCCCC--------CCCCEEEeCc
35550 Confidence 333322 14688888654433222333444 67999998776432 1355677777
35551
35552
35553 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE------ 271 (908)
35554 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~------ 271 (908)
35555 ...++.+++++.+.+.++++++..+. .....+.++|++.+++. ++.+.....+..+.+..+..+.++++++
35556 T Consensus 116 ~~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 194 (303)
35557 T 3KKE_C 116 QKGGGIATEHLITLGHSRIAFISGTAIHDTAQRRKEGYLETLASA-GLRSEAAWVVDAGWEADAGSAALNTLYRGANLGK 194 (303)
35558 T ss_dssp HHHHHHHHHHHHHHTCCCEEEECSCTTCHHHHHHHHHHHHHHHHH-TCCCCGGGEECCCSSHHHHHHHHHHHHHHSCTTS
35559 T ss_pred hHHHHHHHHHHHHcCCCcEEEEeCCCCChHHHHHHHHHHHHHHHc-CCCCCceeEEecCCChHHHHHHHHHHHhhcCCCC
35560 Confidence 77888888888777888999998543 35566778888888765 3332211111100111223344444432
35561
35562
35563 Q NP_000836.2 272 TPNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
35564 Q Consensus 272 ~~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
35565 ..++++|++.. +..+..+++++++.|+.
35566 T Consensus 195 ~~~~~~i~~~~-~~~a~~~~~a~~~~g~~ 222 (303)
35567 T 3KKE_C 195 PDGPTAVVVAS-VNAAVGALSTALRLGLR 222 (303)
35568 T ss_dssp TTSCSEEEESS-HHHHHHHHHHHHHHTCC
35569 T ss_pred CCCCCEEEECC-HHHHHHHHHHHHHCCCC
35570 Confidence 13577777664 44566778888877763
35571
35572
35573 No 259
35574 >3KKE_B LacI family Transcriptional regulator; STRUCTURAL GENOMICS, TRANSCRIPTION, DNA-binding, Transcription; HET: ACT; 2.2A {Mycobacterium smegmatis str. MC2 155}
35575 Probab=96.87 E-value=2.5e-06 Score=85.91 Aligned_cols=205 Identities=12% Similarity=0.124 Sum_probs=117.5 Template_Neff=11.700
35576
35577 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
35578 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
35579 ...++..+||++.|..+. .++..+..+++.++++. |++ +.+.+.. +. ....+.
35580 T Consensus 10 l~~~~~~~I~~v~~~~~~------------~~~~~~~~~~~~~~~~~--------g~~--~~~~~~~-~~----~~~~~~ 62 (303)
35581 T 3KKE_B 10 LRHSRSGTIGLIVPDVNN------------AVFADMFSGVQMAASGH--------STD--VLLGQID-AP----PRGTQQ 62 (303)
35582 T ss_dssp HHHTCCSEEEEECSCTTS------------TTHHHHHHHHHHHHHHT--------TCE--EEEECCC-ST----THHHHH
35583 T ss_pred HhcCCCCEEEEEeCCCCC------------HHHHHHHHHHHHHHhcC--------CCE--EEEEeCC-CC----hhHHHH
35584 Confidence 345678999999987542 24566777887777664 233 3333322 21 112223
35585
35586
35587 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
35588 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
35589 +.+++. ..++|++|+...+.........+ ..++|+|..+...+ +..+.+..++
35590 T Consensus 63 ~~~~~~------------------~~~~d~ii~~~~~~~~~~~~~~~-~~~ipvv~~~~~~~--------~~~~~v~~d~ 115 (303)
35591 T 3KKE_B 63 LSRLVS------------------EGRVDGVLLQRREDFDDDMLAAV-LEGVPAVTINSRVP--------GRVGSVILDD 115 (303)
35592 T ss_dssp HHHHHH------------------TTSCSCEEECCCTTCCHHHHHHH-HTTSCEEEESCCCT--------TSCCEEEECH
35593 T ss_pred HHHHHH------------------cCCCCEEEEeccccCCHHHHHHH-HhCCCEEEeCCCCC--------CCCCEEEeCc
35594 Confidence 333322 14688888654433222333444 67999998776432 1355677777
35595
35596
35597 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE------ 271 (908)
35598 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~------ 271 (908)
35599 ...++.+++++.+.+.++++++..+. .....+.++|++.+++. ++.+.....+..+.+..+..+.++++++
35600 T Consensus 116 ~~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 194 (303)
35601 T 3KKE_B 116 QKGGGIATEHLITLGHSRIAFISGTAIHDTAQRRKEGYLETLASA-GLRSEAAWVVDAGWEADAGSAALNTLYRGANLGK 194 (303)
35602 T ss_dssp HHHHHHHHHHHHHTTCCSEEEEESCTTCHHHHHHHHHHHHHHHHT-TCCCCGGGEEECCSSHHHHHHHHHHHHHHHCTTS
35603 T ss_pred hHHHHHHHHHHHHcCCCcEEEEeCCCCChHHHHHHHHHHHHHHHc-CCCCCceeEEecCCChHHHHHHHHHHHhhcCCCC
35604 Confidence 77888888888777888999998543 35566778888888765 3332211111100111223344444432
35605
35606
35607 Q NP_000836.2 272 TPNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
35608 Q Consensus 272 ~~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
35609 ..++++|++.. +..+..+++++++.|+.
35610 T Consensus 195 ~~~~~~i~~~~-~~~a~~~~~a~~~~g~~ 222 (303)
35611 T 3KKE_B 195 PDGPTAVVVAS-VNAAVGALSTALRLGLR 222 (303)
35612 T ss_dssp TTSCSEEEESS-HHHHHHHHHHHHHTTCC
35613 T ss_pred CCCCCEEEECC-HHHHHHHHHHHHHCCCC
35614 Confidence 13577777664 44566778888877763
35615
35616
35617 No 260
35618 >3BBL_A Regulatory protein of LacI family; Protein Structure Initiative II, PSI-II; HET: EDO; 2.35A {Chloroflexus aggregans}
35619 Probab=96.86 E-value=2.6e-06 Score=84.93 Aligned_cols=146 Identities=13% Similarity=0.134 Sum_probs=85.5 Template_Neff=11.700
35620
35621 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASE 224 (908)
35622 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~ 224 (908)
35623 .++|++|+...... ......+...++|+|..+...+ .+..+.+.+++...++.+++++.+.+.++++++..+
35624 T Consensus 63 ~~~d~ii~~~~~~~-~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~~~~~~~~~l~~~g~~~i~~i~~~ 134 (287)
35625 T 3BBL_A 63 GNVDGFVLSSINYN-DPRVQFLLKQKFPFVAFGRSNP-------DWDFAWVDIDGTAGTRQAVEYLIGRGHRRIAILAWP 134 (287)
35626 T ss_dssp TCCSEEEECSCCTT-CHHHHHHHHTTCCEEEESCCST-------TCCCCEEEECHHHHHHHHHHHHHHHTCCCEEEEECC
35627 T ss_pred CCCCEEEEecCCCC-CHHHHHHHhCCCCEEEeCCCCC-------CCCCcEEEeChHHHHHHHHHHHHHCCCCcEEEEeCC
35628 Confidence 47888887544332 2344556678999998775432 123556667777777788888866678899998844
35629
35630
35631 Q NP_000836.2 225 G--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET---PNARAVIMFANEDDIRRILEAAKKLNQ 299 (908)
35632 Q Consensus 225 ~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
35633 . .....+.+++.+.+++. ++.+..........+..+....++++++. .++|+|++.. +..+..+++++++.|+
35634 T Consensus 135 ~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~-~~~~~~~~~~l~~~g~ 212 (287)
35635 T 3BBL_A 135 EDSRVGNDRLQGYLEAMQTA-QLPIETGYILRGEGTFEVGRAMTLHLLDLSPERRPTAIMTLN-DTMAIGAMAAARERGL 212 (287)
35636 T ss_dssp TTCHHHHHHHHHHHHHHHHT-TCCCCGGGEEECCSSHHHHHHHHHHHHTSCTTTSCSEEEESS-HHHHHHHHHHHHHTTC
35637 T ss_pred ccchHHHHHHHHHHHHHHHC-CCCCCCcceeccCCCHHHHHHHHHHHHccCCCCCCCEEEECC-HHHHHHHHHHHHHCCC
35638 Confidence 2 24556677788777764 33322111111001111233334444321 2467777664 4456778888888776
35639
35640
35641 Q NP_000836.2 300 S 300 (908)
35642 Q Consensus 300 ~ 300 (908)
35643 .
35644 T Consensus 213 ~ 213 (287)
35645 T 3BBL_A 213 T 213 (287)
35646 T ss_dssp C
35647 T ss_pred C
35648 Confidence 4
35649
35650
35651 No 261
35652 >4PZ0_A sugar ABC transporter, sugar-binding protein; structural genomics, The Center for; HET: PAV, EDO; 1.25A {Bacillus anthracis}
35653 Probab=96.85 E-value=2.8e-06 Score=86.62 Aligned_cols=213 Identities=13% Similarity=0.078 Sum_probs=116.2 Template_Neff=11.400
35654
35655 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILD-TCSRDTYALEQSLTF 119 (908)
35656 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d-~~~~~~~a~~~~~~~ 119 (908)
35657 ...+.++||++.|..+. .++..+..+++.++++. |++ +.+.+ +..++ ....+.
35658 T Consensus 6 ~~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~--------g~~--~~~~~~~~~~~----~~~~~~ 59 (324)
35659 T 4PZ0_A 6 KKADDVKFAFIPKLTGV------------GFFTSGGEGAKEMGDKL--------GVQ--VKYDGPSEASV----SGQVKY 59 (324)
35660 T ss_dssp SCGGGCEEEEECSSSSS------------HHHHHHHHHHHHHHHHH--------TCE--EEECCCSSCCH----HHHHHH
35661 T ss_pred hccCCcEEEEEeCCCCC------------hHHHHHHHHHHHHHHHH--------CCE--EEEECCCCCCH----HHHHHH
35662 Confidence 45678999999986542 25567778888887764 233 33344 22232 223334
35663
35664
35665 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
35666 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
35667 +++++. ++++++|+...+.. .......+...++|+|..+...+. ....+.+..+
35668 T Consensus 60 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~~ 114 (324)
35669 T 4PZ0_A 60 INNFIN-------------------QNYDALMVSSTSVDGLSQSLQRAKKKGMTVLTWDSDVNP------KDRSFYISQG 114 (324)
35670 T ss_dssp HHHHHH-------------------TTCSEEEECCSCSSTTHHHHHHHHHTTCEEEEESSCCCG------GGCSEEEESC
35671 T ss_pred HHHHHh-------------------cCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCc------ccCcEEEecC
35672 Confidence 444332 47888776543332 224455677789999987764431 1122333344
35673
35674
35675 Q NP_000836.2 199 D-SYQAQAMVDIVTAL-G-WNYVSTLAS--EGNYGESGVEAFTQISREIG-GVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
35676 Q Consensus 199 ~-~~~~~~~~~~l~~~-~-~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
35677 + ...++.+++++.+. + .++++++.. ++.+...+.+++++.+++.+ ++++....... .+..+....+++++..
35678 T Consensus 115 ~~~~~g~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ 192 (324)
35679 T 4PZ0_A 115 TPDQLANLLIEMTSKQIGDKGKVAFFYSSPTVTDQNQWVTKAKEIIKEKYPNWEIVTTQYGE--NNAQKSLSVGENILKT 192 (324)
35680 T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEESCSSCHHHHHHHHHHHHHHHHHCTTEEEEEEEECT--TCHHHHHHHHHHHHHH
35681 T ss_pred CHHHHHHHHHHHHHHHHCCCeeEEEEEcCCCCHHHHHHHHHHHHHHHHHCCCcEEeeeccCC--CCHHHHHHHHHHHHHH
35682 Confidence 3 45566777777543 4 678988874 33455667777887776521 13332211111 1112334445555421
35683
35684
35685 Q NP_000836.2 273 -PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIG 307 (908)
35686 Q Consensus 273 -~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~ 307 (908)
35687 .++++|++. ++..+..+++++++.|+..++.+++
35688 T Consensus 193 ~~~~~~i~~~-~~~~a~~~~~al~~~g~~~~i~v~g 227 (324)
35689 T 4PZ0_A 193 YPDINAVICP-DATALPAMAQAAENLKMDKKVVVTG 227 (324)
35690 T ss_dssp CTTCCEEEEC-STTHHHHHHHHHHHTTCBTTBEEEE
35691 T ss_pred CCCCCEEEec-CCcchHHHHHHHHHCCCCCCeEEEE
35692 Confidence 246666655 3445667778888777632333443
35693
35694
35695 No 262
35696 >4YS6_A ABC TRANSPORTER SOLUTE BINDING PROTEIN; ABC TRANSPORTER, SOLUTE-BINDING PROTEIN, ENZYME; HET: BGC, MSE; 1.698A {Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)}
35697 Probab=96.85 E-value=2.8e-06 Score=88.09 Aligned_cols=217 Identities=9% Similarity=0.018 Sum_probs=115.7 Template_Neff=11.100
35698
35699 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
35700 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
35701 ....+.++||++.|..+. .++.....+++.++++.| +++.+.|...+. +...+.
35702 T Consensus 31 ~~~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~l~~~~~~~~~----~~~~~~ 84 (360)
35703 T 4YS6_A 31 SGKGSDKLVGVAMPTKDL------------QRWNQDGSNMEKQLKDAG----------YEVDLQYASNDV----QTQVSQ 84 (360)
35704 T ss_dssp ------CEEEEEESCSSS------------THHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHH
35705 T ss_pred CCCCCCcEEEEEecCCCC------------HHHHhhHHHHHHHHHHcC----------CEEEEEeCCCCH----HHHHHH
35706 Confidence 456678999999987542 245567778887777653 344445544332 222333
35707
35708
35709 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAA-SSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
35710 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~-s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
35711 +++++. .+++++|.... +.........+...++|+|..+...+. ..++.+++.++
35712 T Consensus 85 i~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~~v~~d 140 (360)
35713 T 4YS6_A 85 IENMIS-------------------NGCKLLVIASIEGDSLGTVLAQAKKKGISVIAYDRLIMN-----SDAVSYYATFD 140 (360)
35714 T ss_dssp HHHHHH-------------------TTCSEEEECCSSTTSCHHHHHHHHHTTCEEEEESSCCCS-----CTTCCEEEEEC
35715 T ss_pred HHHHHH-------------------CCCCEEEEeCCCcccHHHHHHHHHHCCCEEEEECCCCCC-----CCcccEEEEeC
35716 Confidence 444332 46777765432 222234455667789999987654331 12346677777
35717
35718
35719 Q NP_000836.2 199 DSYQAQAMVDIVTAL-------GWNYVSTLAS--EGNYGESGVEAFTQISREIGG--VCIAQS------QKIPREPRPGE 261 (908)
35720 Q Consensus 199 ~~~~~~~~~~~l~~~-------~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~--i~v~~~------~~~~~~~~~~~ 261 (908)
35721 +...++.+++++.+. +.++++++.. ++.++..+.+++++.+++.++ +.+... .......+..+
35722 T Consensus 141 ~~~~~~~~~~~l~~~~~~~~~~g~~~v~~i~~~~~~~~~~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 220 (360)
35723 T 4YS6_A 141 NYMVGTKQGEYIKEKLNLETAKGPFNLEIFTGDPGDNNARFFYGGAMDVLKPYVDGGVLVVKSGSVAFEKVATAGWSTET 220 (360)
35724 T ss_dssp HHHHHHHHHHHHHHHTTTTTCCCCEEEEEEBCCTTCHHHHHHHHHHHHHHHHHHHTTSEECTTCCCSHHHHBCGGGCHHH
35725 T ss_pred hHHHHHHHHHHHHHHhccccCCCCceEEEEEcCCCChhHHHHHhHHHHHhHhhcCCCeEEEecCceeeeeeccCCCCHHH
35726 Confidence 777777777777543 6779999985 345566777888887766421 221100 00000011111
35727
35728
35729 Q NP_000836.2 262 FEKIIKRLLET-----PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIG 307 (908)
35730 Q Consensus 262 ~~~~~~~l~~~-----~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~ 307 (908)
35731 ....+++++.+ .++|+|++.. +..+..+++++++.|+..++.+++
35732 T Consensus 221 ~~~~~~~~l~~~~~~~~~~d~i~~~~-~~~a~~~~~al~~~g~~~~i~v~~ 270 (360)
35733 T 4YS6_A 221 AQNRMDAIIASYYADGTKLDAVLCSN-DSTALGVTNALTASYKGEWPIVTG 270 (360)
35734 T ss_dssp HHHHHHHHHHHHSSSSCCCCEEEESS-HHHHHHHHHHHHHHCCSSCCEECC
35735 T ss_pred HHHHHHHHHHHhhccCCCceEEEECC-hHHHHHHHHHHHHcCCCCCCEEEE
35736 Confidence 11223333211 3567776654 445667788888777632333443
35737
35738
35739 No 263
35740 >3L49_C ABC sugar (Ribose) transporter, periplasmic; SUGAR BINDING/TRANSPORTER, STRUCTURAL GENOMICS, PSI; HET: UNL; 2.3A {Rhodobacter sphaeroides}
35741 Probab=96.84 E-value=2.9e-06 Score=84.69 Aligned_cols=203 Identities=12% Similarity=0.091 Sum_probs=110.6 Template_Neff=11.900
35742
35743 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
35744 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
35745 ++.++||++.|.... ........+++.++++.| +++.+.|+..++. ...+.+++
35746 T Consensus 3 ~~~~~Ig~~~~~~~~------------~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~~ 56 (291)
35747 T 3L49_C 3 LEGKTIGITAIGTDH------------DWDLKAYQAQIAEIERLG----------GTAIALDAGRNDQ----TQVSQIQT 56 (291)
35748 T ss_dssp CTTCEEEEEESCCCS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECCSCHH----HHHHHHHH
35749 T ss_pred CCCcEEEEEecCCCC------------HHHHHHHHHHHHHHHHCC----------CEEEEEeCCCCHH----HHHHHHHH
35750 Confidence 467899999985432 234456667776666543 3444555443322 22233443
35751
35752
35753 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAA-ASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
35754 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~-~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
35755 ++. ++++++|+.. .+.........+...++|+|..+...+ ..++++.+++..
35756 T Consensus 57 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~--------~~~~~v~~~~~~ 109 (291)
35757 T 3L49_C 57 LIA-------------------QKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTATP--------HAINNTTSNNYS 109 (291)
35758 T ss_dssp HHH-------------------TCCSEEEEECCCHHHHHHHHHHHHHTTCCEEEESCCCT--------TCSEEEECCHHH
35759 T ss_pred HHH-------------------cCCCEEEEcCCChhhhHHHHHHHHHCCCCEEEeCCCCC--------CccceeccChHH
35760 Confidence 332 4788888653 333323445556778999998775432 134555555555
35761
35762
35763 Q NP_000836.2 202 QAQAM-VDIVTALGWN-YVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIP-REPRPGEFEKIIKRLLET-P-- 273 (908)
35764 Q Consensus 202 ~~~~~-~~~l~~~~~~-~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~-~~~~~~~~~~~~~~l~~~-~-- 273 (908)
35765 .+..+ ..++.+.+.+ +++++.. ++.++..+.+++++.+++.+++++....... ...+..+....++++++. .
35766 T Consensus 110 ~~~~~~~~~~~~~g~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (291)
35767 T 3L49_C 110 IGAELALQMVADLGGKGNVLVFNGFYSVPVCKIRYDQMKYVLEAFPDVKIIEPELRDVIPNTIQSAYSNVTDMLTKYPNE 189 (291)
35768 T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTTTSHHHHHHHHHHHHHHTTCTTEEECSSCBCCCSSSHHHHHHHHHHHHHHHCCST
35769 T ss_pred HHHHHHHHHHHHhCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHCCCcEEeccccccCCCCCHHHHHHHHHHHHHHCCCC
35770 Confidence 55433 3444555666 7888875 3445666777887777653223332211000 001112334445555431 1
35771
35772
35773 Q NP_000836.2 274 -NARAVIMFANEDDIRRILEAAKKLNQ 299 (908)
35774 Q Consensus 274 -~~~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
35775 ++++|++.. +..+..+++++++.|+
35776 T Consensus 190 ~~~dai~~~~-~~~a~~~~~~l~~~g~ 215 (291)
35777 T 3L49_C 190 GDVGAIWACW-DVPMIGATQALQAAGR 215 (291)
35778 T ss_dssp TSCCEEEESS-SHHHHHHHHHHHHHTC
35779 T ss_pred CCccEEEEcC-CHHHHHHHHHHHHCCC
35780 Confidence 567777664 4456677888887776
35781
35782
35783 No 264
35784 >3JY6_A Transcriptional regulator, LacI family; NYSGXRC, PSI-II, transcriptional regulator, Lac; 1.97A {Lactobacillus brevis}
35785 Probab=96.83 E-value=3e-06 Score=83.95 Aligned_cols=199 Identities=11% Similarity=0.090 Sum_probs=113.6 Template_Neff=11.700
35786
35787 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
35788 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
35789 .++..+||++.|..+. .++.....+++.++++.+ + ++.+.+...+. ....+.++
35790 T Consensus 4 ~~~~~~Ig~~~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~~~ 57 (276)
35791 T 3JY6_A 4 TQSSKLIAVIVANIDD------------YFSTELFKGISSILESRG--------Y--IGVLFDANADI----EREKTLLR 57 (276)
35792 T ss_dssp -CCCCEEEEEESCTTS------------HHHHHHHHHHHHHHHTTT--------C--EEEEEECTTCH----HHHHHHHH
35793 T ss_pred cCCccEEEEEEcCCCC------------hHHHHHHHHHHHHHHHcC--------C--EEEEEeCCCCH----HHHHHHHH
35794 Confidence 4567899999986532 245567778887776643 2 23344443332 12223333
35795
35796
35797 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
35798 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
35799 .+.. .++|++|+...+.. .....+...++|+|..+...+ .+..+.+..++..
35800 T Consensus 58 ~l~~-------------------~~~d~ii~~~~~~~--~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~ 109 (276)
35801 T 3JY6_A 58 AIGS-------------------RGFDGLILQSFSNP--QTVQEILHQQMPVVSVDREMD-------ACPWPQVVTDNFE 109 (276)
35802 T ss_dssp HHHT-------------------TTCSEEEEESSCCH--HHHHHHHTTSSCEEEESCCCT-------TCSSCEEECCHHH
35803 T ss_pred HHHH-------------------cCCCEEEEecCCCc--HHHHHHHhCCCCEEEeCCCCC-------CCCCCeEEeChHH
35804 Confidence 3332 47888887544332 233445678999988765432 1245566677777
35805
35806
35807 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNY---GESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARA 277 (908)
35808 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~---~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
35809 .++.+++++.+.+.++++++.....+ ...+.+++.+.+++. ++.......+ +..+....+++++. ..++++
35810 T Consensus 110 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~ 184 (276)
35811 T 3JY6_A 110 AAKAATTAFRQQGYQHVVVLTSELELSRTRQERYRGILAAAQDV-DVLEVSESSY----NHSEVHQRLTQLITQNDQKTV 184 (276)
35812 T ss_dssp HHHHHHHHHHTTTCCEEEEEEECSTTCHHHHHHHHHHHTTCSEE-EEEEECSSSC----CHHHHHHHHHHHHHSSSSCEE
35813 T ss_pred HHHHHHHHHHHCCCCEEEEEcCccccchhHHHHHHHHHHHHHhC-CCeEeeccCC----CHHHHHHHHHHHHhcCCCCcE
35814 Confidence 77788888766678899998854332 455667777776654 3322111111 11223344555542 135677
35815
35816
35817 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
35818 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
35819 |++.. +..+..+++++++.|+.
35820 T Consensus 185 i~~~~-~~~a~~~~~~l~~~g~~ 206 (276)
35821 T 3JY6_A 185 AFALK-ERWLLEFFPNLIISGLI 206 (276)
35822 T ss_dssp EEESS-HHHHHHHSHHHHHSSSC
35823 T ss_pred EEEcC-hHHHHHHHHHHHHcCCC
35824 Confidence 76653 44566677777777763
35825
35826
35827 No 265
35828 >3JY6_D Transcriptional regulator, LacI family; NYSGXRC, PSI-II, transcriptional regulator, Lac; 1.97A {Lactobacillus brevis}
35829 Probab=96.83 E-value=3e-06 Score=83.95 Aligned_cols=199 Identities=11% Similarity=0.090 Sum_probs=111.5 Template_Neff=11.700
35830
35831 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
35832 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
35833 .++..+||++.|..+. .++.....+++.++++.+ + ++.+.+...+. ....+.++
35834 T Consensus 4 ~~~~~~Ig~~~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~~~ 57 (276)
35835 T 3JY6_D 4 TQSSKLIAVIVANIDD------------YFSTELFKGISSILESRG--------Y--IGVLFDANADI----EREKTLLR 57 (276)
35836 T ss_dssp ----CEEEEEESCTTS------------HHHHHHHHHHHHHHHTTT--------C--EEEEEECTTCH----HHHHHHHH
35837 T ss_pred cCCccEEEEEEcCCCC------------hHHHHHHHHHHHHHHHcC--------C--EEEEEeCCCCH----HHHHHHHH
35838 Confidence 4567899999986532 245567778887776643 2 23344443332 12223333
35839
35840
35841 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
35842 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
35843 .+.. .++|++|+...+.. .....+...++|+|..+...+ .+..+.+..++..
35844 T Consensus 58 ~l~~-------------------~~~d~ii~~~~~~~--~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~ 109 (276)
35845 T 3JY6_D 58 AIGS-------------------RGFDGLILQSFSNP--QTVQEILHQQMPVVSVDREMD-------ACPWPQVVTDNFE 109 (276)
35846 T ss_dssp HHHH-------------------TTCSEEEECSSCCH--HHHHHHSCSCCCEEEESSCCS-------SCSSCEEEECHHH
35847 T ss_pred HHHH-------------------cCCCEEEEecCCCc--HHHHHHHhCCCCEEEeCCCCC-------CCCCCeEEeChHH
35848 Confidence 3332 47888887544332 233445678999988765432 1245566677777
35849
35850
35851 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGNY---GESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARA 277 (908)
35852 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~~---~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
35853 .++.+++++.+.+.++++++.....+ ...+.+++.+.+++. ++.......+ +..+....+++++. ..++++
35854 T Consensus 110 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~ 184 (276)
35855 T 3JY6_D 110 AAKAATTAFRQQGYQHVVVLTSELELSRTRQERYRGILAAAQDV-DVLEVSESSY----NHSEVHQRLTQLITQNDQKTV 184 (276)
35856 T ss_dssp HHHHHHHHHHTTTCCEEEEEEECGGGCHHHHHHHHHHHTTCSEE-EEEEECTTCC-----CHHHHHHHHHHHHSSCCCEE
35857 T ss_pred HHHHHHHHHHHCCCCEEEEEcCccccchhHHHHHHHHHHHHHhC-CCeEeeccCC----CHHHHHHHHHHHHhcCCCCcE
35858 Confidence 77788888766678899998854332 455667777776654 3322111111 11223344555542 135677
35859
35860
35861 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
35862 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
35863 |++.. +..+..+++++++.|+.
35864 T Consensus 185 i~~~~-~~~a~~~~~~l~~~g~~ 206 (276)
35865 T 3JY6_D 185 AFALK-ERWLLEFFPNLIISGLI 206 (276)
35866 T ss_dssp EEESS-HHHHHHHSHHHHHSSCC
35867 T ss_pred EEEcC-hHHHHHHHHHHHHcCCC
35868 Confidence 76653 44566677777777763
35869
35870
35871 No 266
35872 >5HQJ_A Periplasmic binding protein/LacI transcriptional regulator; ABC TRANSPORTER SOLUTE BINDING PROTEIN; HET: 64K, MSE; 1.55A {Burkholderia graminis C4D1M}
35873 Probab=96.83 E-value=3e-06 Score=85.67 Aligned_cols=204 Identities=10% Similarity=0.095 Sum_probs=114.8 Template_Neff=11.700
35874
35875 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
35876 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
35877 ....+.++||++.+.+. .++..+..+++.++++.+ +++.+...++ .++ +...+.
35878 T Consensus 23 ~~~~~~~~Ig~~~~~~~-------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~-~~~----~~~~~~ 76 (311)
35879 T 5HQJ_A 23 MKDAKDISVAVIPKVAV-------------PFFDDCNKGAKTAADKAG--------VKYQWVVPQN-TQG----STQVQI 76 (311)
35880 T ss_dssp CCCGGGCEEEEECSSSC-------------TTHHHHHHHHHHHHHHHT--------CEEEECCCSS-SSS----HHHHHH
35881 T ss_pred cccCCCceEEEecCCCC-------------HHHHHHHHHHHHHHHHHC--------CEEEEECCCC-CCH----HHHHHH
35882 Confidence 34567899999665432 245677888888888763 3444433332 221 122333
35883
35884
35885 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVI-GAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
35886 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vI-g~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
35887 +++++. ++++++| ++..+.........+...++|+|..+...+. .++.+++.++
35888 T Consensus 77 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d 131 (311)
35889 T 5HQJ_A 77 IEDLIS-------------------RHVDGIAISVNEPKSVESVMKRAEQSGIKVLTYDSDSPK------SGRSMYIGTN 131 (311)
35890 T ss_dssp HHHHHH-------------------TTCSEEEECCSSTGGGHHHHHHHHTTTCEEEEESSCCTT------SCCSCEEECC
35891 T ss_pred HHHHHH-------------------cCCCEEEEcCCCHHHHHHHHHHHHHcCCeEEEEcCCCCC------CCCcEEEecC
35892 Confidence 444332 4678775 4443333233445566789999987764321 2456677777
35893
35894
35895 Q NP_000836.2 199 DSYQAQAMVDIVTA--LGWNYVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TP 273 (908)
35896 Q Consensus 199 ~~~~~~~~~~~l~~--~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~ 273 (908)
35897 ....++.+++++.+ .+.++++++.. +..+...+.+++++.+++..++++....... .+..+....+++++. ..
35898 T Consensus 132 ~~~~~~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 209 (311)
35899 T 5HQJ_A 132 NEQAGATMAETMGKALNGQGEVAIITGQLGAVNLNERIAGIKKGLAKYPGIKVVETQGTD--DDLARGVSVVETTLRAHP 209 (311)
35900 T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEECSCTTCHHHHHHHHHHHHHHTTCTEEEEEEEECCT--TCHHHHHHHHHHHHHHCT
35901 T ss_pred HHHHHHHHHHHHHHHcCCCeeEEEEECCCCCccHHHHHHHHHHHHHhCCCcEEEEecCCC--ccHHHHHHHHHHHHHHCC
35902 Confidence 77778888888765 57789999985 3445666777888877653124443221111 111223344444442 12
35903
35904
35905 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKL 297 (908)
35906 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~ 297 (908)
35907 ++++|++.. +..+..+++++++.
35908 T Consensus 210 ~~~~i~~~~-~~~a~~~~~~~~~~ 232 (311)
35909 T 5HQJ_A 210 NLKGIFGVS-QVGGPAVAKVLNTR 232 (311)
35910 T ss_dssp TEEEEEECS-TTHHHHHHHHHTST
35911 T ss_pred CccEEEEec-CCcHHHHHHHHHHH
35912 Confidence 567776654 33445566666543
35913
35914
35915 No 267
35916 >3EJW_A SmLsrB; Periplasmic binding protein, Plasmid, SIGNALING; HET: PAV; 1.8A {Sinorhizobium meliloti}
35917 Probab=96.81 E-value=3.3e-06 Score=85.59 Aligned_cols=211 Identities=10% Similarity=-0.016 Sum_probs=114.6 Template_Neff=11.400
35918
35919 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
35920 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
35921 +++||++.|..+. .++..+..+++.++++.+ +++.+...+ ..++ +...+.+++++
35922 T Consensus 1 ~~~Ig~v~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~~-~~~~----~~~~~~~~~l~ 55 (315)
35923 T 3EJW_A 1 ENQIAFIPKLVGV------------GFFTSGGAGAVKAGEEVG--------AKVTYDGPT-EPSV----SGQVQFINNFV 55 (315)
35924 T ss_dssp CCEEEEECSCSSS------------HHHHHHHHHHHHHHHHHT--------CEEEECCCS-SCCH----HHHHHHHHHHH
35925 T ss_pred CcEEEEEeccCCC------------hHHHHHHHHHHHHHHHHC--------CEEEEECCC-CCCH----HHHHHHHHHHH
35926 Confidence 3689999987652 255677888888888763 334333221 2222 22333444443
35927
35928
35929 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP-PDSYQ 202 (908)
35930 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~-~~~~~ 202 (908)
35931 . ++++++|+...+.. .......+...++|+|..+...+. ....+.+.. +....
35932 T Consensus 56 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~~~~~~~ 110 (315)
35933 T 3EJW_A 56 N-------------------QGYNALIVSSVSPDGLCPALKRAMERGVLVMTWDSDVNP------DCRSYYINQGTPEQL 110 (315)
35934 T ss_dssp H-------------------TTCSEEEECCSCSSTTHHHHHHHHHTTCEEEEESSCCCG------GGCSEEEESCCHHHH
35935 T ss_pred H-------------------cCCCEEEEcCCChhhhHHHHHHHHHCCCEEEEEcCCCCc------ccccEEEeCCCHHHH
35936 Confidence 2 47888776543322 224455667789999987764431 111222333 45555
35937
35938
35939 Q NP_000836.2 203 AQAMVDIVTAL--G-WNYVSTLAS--EGNYGESGVEAFTQISREIG-GVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNA 275 (908)
35940 Q Consensus 203 ~~~~~~~l~~~--~-~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 275 (908)
35941 ++.+++++.+. + .++++++.. ++.++..+.++|++.+++.+ ++++....... .+..+....++++++ ..++
35942 T Consensus 111 g~~~~~~l~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~ 188 (315)
35943 T 3EJW_A 111 GGLLVDMAAEGVKKEKAKVAFFYSSPTVTDQNAWAEAAKAKIAKEHPGWEIVTTQYGY--NDAQKSLQTAESILQTYPDL 188 (315)
35944 T ss_dssp HHHHHHHHHHHHCCSSEEEEEEESCSSCHHHHHHHHHHHHHHHHHCTTEEEEEEEECT--TCHHHHHHHHHHHHHHCTTC
35945 T ss_pred HHHHHHHHHHHcccCCCcEEEEEcCCCcHHHHHHHHHHHHHHHHHCCCcEEeecccCC--CCHHHHHHHHHHHHHHCCCC
35946 Confidence 66777776443 3 688998875 34456667778888776531 23332211111 111233344555542 1256
35947
35948
35949 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
35950 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
35951 ++|+... +..+..+++++++.|+..++.+++.
35952 T Consensus 189 ~~i~~~~-~~~a~~~~~al~~~g~~~~v~v~~~ 220 (315)
35953 T 3EJW_A 189 DAIIAPD-ANALPAAAQAAENLKRAEGVTIVGF 220 (315)
35954 T ss_dssp CEEEECS-TTHHHHHHHHHHHHTCTTTCEEEEB
35955 T ss_pred CEEEeCC-CCchHHHHHHHHHcccCCCCEEEEe
35956 Confidence 6666553 4456677888888776323444443
35957
35958
35959 No 268
35960 >3QK7_C Transcriptional regulators; STRUCTURAL GENOMICS, NEW YORK STRUCTURAL; 2.7A {Yersinia pestis}
35961 Probab=96.81 E-value=3.3e-06 Score=84.46 Aligned_cols=207 Identities=11% Similarity=0.100 Sum_probs=115.7 Template_Neff=11.800
35962
35963 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
35964 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
35965 .+++.+||++.|.++... ...+...+..+++.++++.+ +++ .+.+.. +. +...+.++
35966 T Consensus 3 ~~~~~~I~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~~g--------~~~--~~~~~~-~~----~~~~~~~~ 59 (294)
35967 T 3QK7_C 3 LGRTDAIALAYPSRPRVL--------NNSTFLEMISWIGIELGKRG--------LDL--LLIPDE-PG----EKYQSLIH 59 (294)
35968 T ss_dssp --CCCEEEEEEESSSGGG--------CCHHHHHHHHHHHHHHHTTT--------CEE--EEEEEC-TT----CCCHHHHH
35969 T ss_pred CCCCCeEEEEecCCchhh--------cCHHHHHHHHHHHHHHHHcC--------CeE--EEEeCC-Ch----hHHHHHHH
35970 Confidence 356789999998643100 01244566677777666542 333 333322 21 12223333
35971
35972
35973 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
35974 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
35975 ++.. .++|++|....+... .....+...++|+|..+...+ .+.++.+.++...
35976 T Consensus 60 ~~~~-------------------~~~d~ii~~~~~~~~-~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~ 112 (294)
35977 T 3QK7_C 60 LVET-------------------RRVDALIVAHTQPED-FRLQYLQKQNFPFLALGRSHL-------PKPYAWFDFDNHA 112 (294)
35978 T ss_dssp HHHT-------------------TCCSEEEECSCCSSC-HHHHHHHHTTCCEEEESCCCC-------SSCCEEEEECHHH
35979 T ss_pred HHHh-------------------CCCCEEEEeCCCCCc-HHHHHHHHCCCCEEEECCCCC-------CCCCeEEEeChHH
35980 Confidence 3322 478888865444333 344556668999998775432 1345667777777
35981
35982
35983 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAV 278 (908)
35984 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vi 278 (908)
35985 .++.+++++.+.+.++++++..+. .....+.+++++.+++. ++.+..........+..+....++++++ ..++|+|
35986 T Consensus 113 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 191 (294)
35987 T 3QK7_C 113 GASLAVKRLLELGHQRIAFVSTDARISYVDQRLQGYVQTMSEA-GLMPLAGYLQKADPTRPGGYLAASRLLALEVPPTAI 191 (294)
35988 T ss_dssp HHHHHHHHHHHTTCCSEEEEEECSCSHHHHHHHHHHHHHHHHT-TCCCCTTCEEEECSSHHHHHHHHHHHHTSSSCCSEE
35989 T ss_pred HHHHHHHHHHHCCCCeEEEEeCCCCCcHHHHHHHHHHHHHHHC-CCCCcccceecCCCCchHHHHHHHHHHcCCCCCCEE
35990 Confidence 788888888767888999988532 34556777888887765 3433211111100111223344555542 1357777
35991
35992
35993 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
35994 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
35995 ++.. +..+..+++++++.|+.
35996 T Consensus 192 ~~~~-~~~a~~~~~~l~~~g~~ 212 (294)
35997 T 3QK7_C 192 ITDC-NMLGDGVASALDKAGLL 212 (294)
35998 T ss_dssp EESS-HHHHHHHHHHHHHHTCB
35999 T ss_pred EECC-cHHHHHHHHHHHHcCCC
36000 Confidence 7654 44566778888877763
36001
36002
36003 No 269
36004 >3E3M_D Transcriptional regulator, LacI family; STRUCTURAL GENOMICS, TRANSCRIPTION, DNA-binding, Plasmid; 1.6A {Silicibacter pomeroyi}
36005 Probab=96.81 E-value=3.3e-06 Score=87.29 Aligned_cols=204 Identities=13% Similarity=0.136 Sum_probs=115.2 Template_Neff=11.300
36006
36007 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
36008 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
36009 .++..+||+++|..+. .++.....+++.++++.+ + ++.+.+...++ +...+.++
36010 T Consensus 67 ~~~~~~I~~v~~~~~~------------~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~~~ 120 (355)
36011 T 3E3M_D 67 TKRSGFVGLLLPSLNN------------LHFAQTAQSLTDVLEQGG--------L--QLLLGYTAYSP----EREEQLVE 120 (355)
36012 T ss_dssp ----CEEEEEESCSBC------------HHHHHHHHHHHHHHHHTT--------C--EEEEEECTTCH----HHHHHHHH
36013 T ss_pred cCCCCEEEEEecCCCC------------hhHHHHHHHHHHHHHHCC--------C--EEEEEeCCCCh----HHHHHHHH
36014 Confidence 3567899999986532 245566777777665542 2 33344443332 22233344
36015
36016
36017 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
36018 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
36019 +++. .++|++|+.... ........+.+.++|+|..+...+ .+..+++..++..
36020 T Consensus 121 ~~~~-------------------~~~d~ii~~~~~-~~~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~ 173 (355)
36021 T 3E3M_D 121 TMLR-------------------RRPEAMVLSYDG-HTEQTIRLLQRASIPIVEIWEKPA-------HPIGHTVGFSNER 173 (355)
36022 T ss_dssp HHHH-------------------TCCSEEEEECSC-CCHHHHHHHHTSCSCEEEESSCCS-------SCSSEEEECCHHH
36023 T ss_pred HHHH-------------------hCCCEEEEcCCC-CCHHHHHHHHHCCCCEEEEcCCCC-------CCCCcEEEeCHHH
36024 Confidence 3332 478888874322 233445566678999998875432 1345566777777
36025
36026
36027 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGN---YGESGVEAFTQISREIGGVCIAQSQKIP-REPRPGEFEKIIKRLLE-TPNAR 276 (908)
36028 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~---~~~~~~~~~~~~~~~~~~i~v~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~ 276 (908)
36029 .+..+++++.+.+.++|+++..... ....+.++|++.+++. ++.+....... ...+..+....+++++. ..++|
36030 T Consensus 174 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 252 (355)
36031 T 3E3M_D 174 AAYDMTNALLARGFRKIVFLGEKDDDWTRGAARRAGFKRAMREA-GLNPDQEIRLGAPPLSIEDGVAAAELILQEYPDTD 252 (355)
36032 T ss_dssp HHHHHHHHHHHTTCCSEEEEEESSCTTSHHHHHHHHHHHHHHHT-TSCSCCEEEESCSSCCHHHHHHHHHHHHHHCTTCC
36033 T ss_pred HHHHHHHHHHHCCCCeEEEEcCCCCCchhHHHHHHHHHHHHHHC-CCCCCcceecCCCCCCHHHHHHHHHHHHHHCCCCc
36034 Confidence 7778888876667889999875432 2456777888887765 34322111100 00111223344555442 13578
36035
36036
36037 Q NP_000836.2 277 AVIMFANEDDIRRILEAAKKLNQS 300 (908)
36038 Q Consensus 277 viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36039 +|++.. +..+..+++++++.|+.
36040 T Consensus 253 ai~~~~-~~~a~~~~~al~~~g~~ 275 (355)
36041 T 3E3M_D 253 CIFCVS-DMPAFGLLSRLKSIGVA 275 (355)
36042 T ss_dssp EEEESS-HHHHHHHHHHHHHHTCC
36043 T ss_pred EEEECC-cHHHHHHHHHHHHcCCC
36044 Confidence 787764 44566788888888763
36045
36046
36047 No 270
36048 >2WRZ_A L-ARABINOSE-BINDING PERIPLASMIC PROTEIN; SUGAR TRANSPORT, ARABINOSE BINDING PROTEIN; 2.2A {ESCHERICHIA COLI}
36049 Probab=96.80 E-value=3.5e-06 Score=84.89 Aligned_cols=206 Identities=12% Similarity=0.097 Sum_probs=109.7 Template_Neff=11.900
36050
36051 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
36052 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
36053 +++||++.|..+. .++..+..+++.++++.| +++.+.+. .+. +...+.+++++
36054 T Consensus 2 ~~~I~~i~~~~~~------------~~~~~~~~~~~~~~~~~~----------~~l~~~~~-~~~----~~~~~~~~~l~ 54 (306)
36055 T 2WRZ_A 2 NLKLGFLVAQPEE------------PASQTQWKFADKAGKDLG----------FEVIKIAV-PDG----EKTLNAIDSLA 54 (306)
36056 T ss_dssp CCEEEEEESCTTS------------HHHHHHHHHHHHHHHHHT----------CEEEEEEC-SSH----HHHHHHHHHHH
36057 T ss_pred CeEEEEEeCCCCC------------hHHHHHHHHHHHHHHHhC----------CEEEEEeC-CCH----HHHHHHHHHHH
36058 Confidence 5789999987542 245667788888887753 23333343 221 22333444433
36059
36060
36061 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGV-IGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQA 203 (908)
36062 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~v-Ig~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (908)
36063 . .+++++ +++..+.........+...++|+|..+...+.... ...++++++.+++...+
36064 T Consensus 55 ~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~~-~~~~~~~~v~~d~~~~~ 114 (306)
36065 T 2WRZ_A 55 A-------------------SGAKGFVISTPDPKLGSAIVAKARGYDMKVIAVDNQFVNAKG-KPMDTVPLVMEAATKIG 114 (306)
36066 T ss_dssp H-------------------HTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCBCTTS-CBCCSSCEEECCHHHHH
36067 T ss_pred H-------------------CCCCEEEEeCCCcchhHHHHHHHHhCCCEEEEEcCcccCCCC-CCcccccEEecchHHHH
36068 Confidence 2 467774 44444433334455566789999988764432110 01234666777776667
36069
36070
36071 Q NP_000836.2 204 QAMVDIVTA----LGWN--YVSTLAS---EGNYGESGVEAFTQISREIG--GVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
36072 Q Consensus 204 ~~~~~~l~~----~~~~--~v~ii~~---~~~~~~~~~~~~~~~~~~~~--~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
36073 +.+++++.+ .+++ ++.++.. +..++..+.+++++.+++.+ ...+....... .+..+....++++++
36074 T Consensus 115 ~~~~~~l~~~~~~~g~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~l~- 191 (306)
36075 T 2WRZ_A 115 ERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKS--EDIPGAFDAANSMLV- 191 (306)
36076 T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEEECTTSHHHHHHHHHHHHHHHHTTCCGGGEEEEECSS--SSHHHHHHHHHHHHH-
36077 T ss_pred HHHHHHHHHHHHHcCCCccceEEEEEEcCCChhhHHHHHHHHHHHHHcCCCCceeEEecCCC--CChhHHHHHHHHHHH-
36078 Confidence 777766533 4555 6665542 22345567778888777642 01221111100 111233445555543
36079
36080
36081 Q NP_000836.2 273 PNARA---VIMFANEDDIRRILEAAKKLNQS 300 (908)
36082 Q Consensus 273 ~~~~v---iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36083 .+++. ++++.++..+..+++++++.|+.
36084 T Consensus 192 ~~~~~~~~~i~~~~~~~a~~~~~~l~~~g~~ 222 (306)
36085 T 2WRZ_A 192 QHPEVKHWLIVGMNDSTVLGGVRATEGQGFK 222 (306)
36086 T ss_dssp TCTTCSEEEEECSSHHHHHHHHHHHHHTTCC
36087 T ss_pred hCCCCceEEEEecChHHHHHHHHHHHhCCCC
36088 Confidence 23332 23333344566788888887764
36089
36090
36091 No 271
36092 >5BQ3_A Rhamnose ABC transporter, rhamnose-binding protein; ABC transporter, Structural Genomics, Joint; HET: MSE; 2.6A {Actinomyces odontolyticus ATCC 17982}
36093 Probab=96.78 E-value=3.7e-06 Score=85.92 Aligned_cols=218 Identities=11% Similarity=0.032 Sum_probs=115.3 Template_Neff=11.600
36094
36095 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNI-TLGVRILDTCSRDTYALEQSL 117 (908)
36096 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~-~l~~~~~d~~~~~~~a~~~~~ 117 (908)
36097 .....+.++||++.|..+. .++.....+++.++++.+ + ++.+.. ++..++ ....
36098 T Consensus 21 ~~~~~~~~~Igv~~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~~~~~-~~~~~~----~~~~ 75 (332)
36099 T 5BQ3_A 21 GSYDVSSQSITFIPKQLNN------------PFSDVMLGGGKNAAGEIG--------FAEVNVVG-PLEASS----SSQV 75 (332)
36100 T ss_dssp CCCCCSSCEEEEECSSSSC------------HHHHHHHHHHHHHHHHHT--------CSEEEECC-CSSCCT----TTTH
36101 T ss_pred CcccCCCcEEEEEeCCCCC------------HHHHHHHHHHHHHHHHhC--------CcEEEEEC-CCCCCH----HHHH
36102 Confidence 4556778999999986542 245667778888887753 3 344433 332222 2223
36103
36104
36105 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVI-GAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVV 196 (908)
36106 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vI-g~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~ 196 (908)
36107 +.+++++. ++++++| ++..+.........+...++|+|..+...+. .....+...
36108 T Consensus 76 ~~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~v~~ 131 (332)
36109 T 5BQ3_A 76 SFINSEVQ-------------------AGTNVLVIAANDPDAVCPALQDARKAGTKVVTFDSDSAA-----DCRDLFINQ 131 (332)
36110 T ss_dssp HHHHHHHH-------------------TTCSEEEECCSSTTTSHHHHHHHHHHTCEEEEESSCCCT-----TSCSEEEES
36111 T ss_pred HHHHHHHH-------------------hCCCEEEEeCCCHHhhHHHHHHHHHcCCEEEEECCCCCc-----cccceeEec
36112 Confidence 33444332 4678744 4443333334445566789999987765431 011222222
36113
36114
36115 Q NP_000836.2 197 PPDSYQAQAMVDIVTAL--GWNYVSTLAS--EGNYGESGVEAFTQISRE---IGGVCIAQSQKIPREPRPGEFEKIIKRL 269 (908)
36116 Q Consensus 197 ~~~~~~~~~~~~~l~~~--~~~~v~ii~~--~~~~~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~l 269 (908)
36117 .+....++.+++++.+. +.++++++.. +..+...+.+.+++.+++ ..++++....... .+..+....++++
36118 T Consensus 132 ~~~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 209 (332)
36119 T 5BQ3_A 132 VESKQVAITMLDMVSDQIGGSGKVAILSATANAANQNAWIKFMEDEIASNDKYKGIEIVAKVYGD--DDDTKSFQEAQGL 209 (332)
36120 T ss_dssp SCHHHHHHHHHHHHHHHHTSCEEEEEEESCTTCHHHHHHHHHHHHHHHHCTTSTTEEEEEEEECT--TCHHHHHHHHHHH
36121 T ss_pred cCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCHHHHHHHHHHHHHHHhchhcCCeEEEEEEeCC--CCHHHHHHHHHHH
36122 Confidence 44555566777776554 5678999985 333455666777766642 1123332111111 1112233445555
36123
36124
36125 Q NP_000836.2 270 LET-PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
36126 Q Consensus 270 ~~~-~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
36127 ++. .+.++|+... +..+..+++++++.|+..++.+++.
36128 T Consensus 210 l~~~~~~~~i~~~~-~~~a~~~~~~l~~~g~~~~v~vi~~ 248 (332)
36129 T 5BQ3_A 210 LQAHPDLNAIVSPT-TVGIAATARYLSTSDYKGKVFLTGL 248 (332)
36130 T ss_dssp HHHCTTCCEEEECS-HHHHHHHHHHHHHSTTTTTSEEEEB
36131 T ss_pred HHHCCCcCEEEeCC-cchHHHHHHHHhhcCCCCcEEEEEe
36132 Confidence 421 2455665543 4445567778877776323444443
36133
36134
36135 No 272
36136 >4RY0_A Probable ribose ABC transporter, substrate-binding; SUGAR TRANSPORTER, ENZYME FUNCTION INITIATIVE; HET: RIP; 1.4A {Rhizobium etli CFN 42}
36137 Probab=96.77 E-value=3.9e-06 Score=83.60 Aligned_cols=211 Identities=9% Similarity=0.047 Sum_probs=113.7 Template_Neff=12.000
36138
36139 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
36140 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
36141 +..+||++.|..+. .++.....+++.++++.+ +++.+.++..++. ...+.++++
36142 T Consensus 2 ~~~~I~~v~~~~~~------------~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~~~----~~~~~~~~l 55 (289)
36143 T 4RY0_A 2 MADLIAIITPAHDN------------PFFKAEAVGAEAKAKELG----------YETLVMTHDDDAN----KQSEMIDTA 55 (289)
36144 T ss_dssp CCCEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCHH----HHHHHHHHH
36145 T ss_pred ccceEEEEecCCCC------------HHHHHHHHHHHHHHHHhC----------CEEEEEcCCCCHH----HHHHHHHHH
36146 Confidence 46789999987542 255667778887777642 3344444433321 222333333
36147
36148
36149 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAA-ASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
36150 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~-~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
36151 +. ++++++|... ...........+.+.++|+|..+...+. ..++++++.+++...
36152 T Consensus 56 ~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~~v~~d~~~~ 111 (289)
36153 T 4RY0_A 56 IG-------------------RGAKAIILDNAGADASVAAVKKAKDAGIPSFLIDREINA-----TGVAVAQIVSNNYQG 111 (289)
36154 T ss_dssp HH-------------------TTCSEEEECCSCTTTHHHHHHHHHHTTCCEEEESSCCSC-----SSSSSEEEEECHHHH
36155 T ss_pred Hh-------------------cCCCEEEEeCCChhhhHHHHHHHHHCCCCEEEeCCCCCC-----CCCceEEEEcCcHHH
36156 Confidence 32 4677665433 2222223345566789999987654331 123456677777777
36157
36158
36159 Q NP_000836.2 203 AQAMVDIVTALGWN--YVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARA 277 (908)
36160 Q Consensus 203 ~~~~~~~l~~~~~~--~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
36161 ++.+++++.+.+.+ +++++.. +..+...+.++|++.+++.+...+....... .+..+....+++++. ..++|+
36162 T Consensus 112 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~ 189 (289)
36163 T 4RY0_A 112 AQLGAQEFVKLMGEKGNYVELVGKESDTNAGIRSQGYHDVIDDYPEMKSVAKQSAN--WSQTEAYSKMETILQANPDIKG 189 (289)
36164 T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCTTSHHHHHHHHHHHHHHTTCTTEEEEEEEECT--TCHHHHHHHHHHHHHHCTTCCE
36165 T ss_pred HHHHHHHHHHHhCCCccEEEEEcCCCChhHHHHHHHHHHHHHHCCCeEEEEeeeCC--CCHHHHHHHHHHHHHHCCCCCE
36166 Confidence 77888877654433 3555543 2334556777888877664212221111000 111223344555542 135777
36167
36168
36169 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
36170 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
36171 |++.. +..+..+++++++.|.. ++.+++.
36172 T Consensus 190 i~~~~-~~~a~~~~~a~~~~~~~-~~~ii~~ 218 (289)
36173 T 4RY0_A 190 VISGN-DTMAMGAIAALQAAGRK-DVIVVGF 218 (289)
36174 T ss_dssp EEESS-HHHHHHHHHHHHHTTCT-TSEEECS
36175 T ss_pred EEECC-hHHHHHHHHHHHHCCCC-CeEEEEe
36176 Confidence 76664 44566777888777662 3344443
36177
36178
36179 No 273
36180 >3TB6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA; HET: ARB, GOL; 2.21A {Bacillus subtilis}
36181 Probab=96.75 E-value=4.4e-06 Score=83.69 Aligned_cols=206 Identities=12% Similarity=0.113 Sum_probs=114.5 Template_Neff=12.000
36182
36183 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
36184 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
36185 ...+..+||++.|..+. .++..+..+++.++++.| +++.+.+...++ +...+.+
36186 T Consensus 11 ~~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~----~~~~~~~ 64 (298)
36187 T 3TB6_A 11 ALHSNKTIGVLTTYISD------------YIFPSIIRGIESYLSEQG----------YSMLLTSTNNNP----DNERRGL 64 (298)
36188 T ss_dssp ----CCEEEEEESCSSS------------TTHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHH
36189 T ss_pred hccCCCeEEEEecCCcc------------hhHHHHHHHHHHHHHHcC----------CcEEEEecCCCH----HHHHHHH
36190 Confidence 45568899999997542 256677888888887753 233444443332 2223334
36191
36192
36193 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSI----MVANILRLFKIPQISYASTAPELSDNTRYDFFSRVV 196 (908)
36194 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~----~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~ 196 (908)
36195 ++++. ++++++|+...+.... .....+...++|+|..+...+ .+..+++.
36196 T Consensus 65 ~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~-------~~~~~~v~ 118 (298)
36197 T 3TB6_A 65 ENLLS-------------------QHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINASYA-------ELAAPSFT 118 (298)
36198 T ss_dssp HHHHH-------------------TCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSCCT-------TCSSCEEE
36199 T ss_pred HHHHh-------------------CCCCEEEEecCCcccCCCChHHHHHHHHcCCCEEEEecCCC-------CCCCCEEE
36200 Confidence 44332 4788888654433211 222355678999998776443 13456667
36201
36202
36203 Q NP_000836.2 197 PPDSYQAQAMVDIVTALGWNYVSTLAS-EGNYGESGVEAFTQISREIGGVCIAQS--QKIPREPRPGEFEKIIKRLLE-- 271 (908)
36204 Q Consensus 197 ~~~~~~~~~~~~~l~~~~~~~v~ii~~-~~~~~~~~~~~~~~~~~~~~~i~v~~~--~~~~~~~~~~~~~~~~~~l~~-- 271 (908)
36205 .+....++.+++++.+.+.++++++.. ++..+..+.++|++.+++. ++..... .......+..+..+.++++++
36206 T Consensus 119 ~d~~~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 197 (298)
36207 T 3TB6_A 119 LDDVKGGMMAAEHLLSLGHTHMMGIFKADDTQGVKRMNGFIQAHRER-ELFPSPDMIVTFTTEEKESKLLEKVKATLEKN 197 (298)
36208 T ss_dssp ECHHHHHHHHHHHHHHTTCCSEEEEEESSSHHHHHHHHHHHHHHHHT-TCCCCGGGEEEECHHHHTTHHHHHHHHHHHHT
36209 T ss_pred eCHHHHHHHHHHHHHHCCCCeEEEEEcCCCccchHHHHHHHHHHHhC-CCCCChhhEEEecchHHHHHHHHHHHHHHHHc
36210 Confidence 777777778888876667888888874 3345566777888877764 2322111 001100111111222333321
36211
36212
36213 Q NP_000836.2 272 -TPNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
36214 Q Consensus 272 -~~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36215 ..++++|++.. +..+..+++++++.|+.
36216 T Consensus 198 ~~~~~~~i~~~~-~~~a~~~~~~l~~~g~~ 226 (298)
36217 T 3TB6_A 198 SKHMPTAILCYN-DEIALKVIDMLREMDLK 226 (298)
36218 T ss_dssp TTSCCSEEECSS-HHHHHHHHHHHHHTTCC
36219 T ss_pred ccCCCCEEEEcC-hHHHHHHHHHHHHCCCC
36220 Confidence 12478887764 44566778888877763
36221
36222
36223 No 274
36224 >3GYB_A Transcriptional regulators (LACI-FAMILY TRANSCRIPTIONAL REGULATORY; Transcription, Protein Structure Initiative II(PSI; 1.6A {Corynebacterium glutamicum}
36225 Probab=96.70 E-value=5.4e-06 Score=82.18 Aligned_cols=198 Identities=14% Similarity=0.080 Sum_probs=111.6 Template_Neff=11.800
36226
36227 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
36228 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
36229 +++++||++.|..+. .++..+..+++.++++. |+++ .+.+...+ . ...+.+++
36230 T Consensus 3 ~~~~~I~~v~~~~~~------------~~~~~~~~g~~~~~~~~--------g~~~--~~~~~~~~-~----~~~~~~~~ 55 (280)
36231 T 3GYB_A 3 LRTQLIAVLIDDYSN------------PWFIDLIQSLSDVLTPK--------GYRL--SVIDSLTS-Q----AGTDPITS 55 (280)
36232 T ss_dssp -CCCEEEEEESCTTS------------GGGHHHHHHHHHHHGGG--------TCEE--EEECSSSS-C----SSSCHHHH
36233 T ss_pred CCCcEEEEEecCCCC------------hHHHHHHHHHHHHHHHh--------CcEE--EEEecCCC-c----ccchHHHH
36234 Confidence 457899999987542 25566777888777664 2333 33333222 1 12223333
36235
36236
36237 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
36238 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
36239 ++. +++|++|+....... .+...++|++..+...+. .+..+.+.+++...
36240 T Consensus 56 ~~~-------------------~~~d~ii~~~~~~~~-----~~~~~~~pvv~~~~~~~~------~~~~~~v~~d~~~~ 105 (280)
36241 T 3GYB_A 56 ALS-------------------MRPDGIIIAQDIPDF-----TVPDSLPPFVIAGTRITQ------ASTHDSVANDDFRG 105 (280)
36242 T ss_dssp HHT-------------------TCCSEEEEESCC-------------CCCEEEESCCCSS------SCSTTEEEECHHHH
36243 T ss_pred HHh-------------------cCCCEEEEeCCCCCC-----CCcccCCCEEEeCCCCCC------CCCCcEEEeChHHH
36244 Confidence 332 478888875433321 134568998876653321 13456677777777
36245
36246
36247 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARAVIMF 281 (908)
36248 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~viv~~ 281 (908)
36249 ++.+++++.+.+.++++++..+......+.++|.+.+++. ++.+....... ..+..+....+++++.. .++++|++.
36250 T Consensus 106 ~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~ 183 (280)
36251 T 3GYB_A 106 AEIATKHLIDLGHTHIAHLRVGSGAGLRRFESFEATMRAH-GLEPLSNDYLG-PAVEHAGYTETLALLKEHPEVTAIFSS 183 (280)
36252 T ss_dssp HHHHHHHHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHT-TCCCEECCCCS-CCCHHHHHHHHHHHHHHCTTCCEEEES
36253 T ss_pred HHHHHHHHHHCCCCeEEEEeCCCcchHHHHHHHHHHHHHC-CCCCCcccccC-CcccchHHHHHHHHHHhCCCCCEEEEC
36254 Confidence 8888888876677899998865556667778888887765 34433221111 01112233444455421 246777766
36255
36256
36257 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQS 300 (908)
36258 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~ 300 (908)
36259 . +..+..+++++++.|+.
36260 T Consensus 184 ~-~~~a~~~~~~~~~~g~~ 201 (280)
36261 T 3GYB_A 184 N-DITAIGALGAARELGLR 201 (280)
36262 T ss_dssp S-HHHHHHHHHHHHHHTCC
36263 T ss_pred C-HHHHHHHHHHHHHcCCC
36264 Confidence 4 34566778888877764
36265
36266
36267 No 275
36268 >3GYB_B Transcriptional regulators (LACI-FAMILY TRANSCRIPTIONAL REGULATORY; Transcription, Protein Structure Initiative II(PSI; HET: MSE; 1.6A {Corynebacterium glutamicum}
36269 Probab=96.70 E-value=5.4e-06 Score=82.18 Aligned_cols=198 Identities=14% Similarity=0.080 Sum_probs=106.1 Template_Neff=11.800
36270
36271 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
36272 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
36273 +++++||++.|..+. .++..+..+++.++++. |+++ .+.+...+ . ...+.+++
36274 T Consensus 3 ~~~~~I~~v~~~~~~------------~~~~~~~~g~~~~~~~~--------g~~~--~~~~~~~~-~----~~~~~~~~ 55 (280)
36275 T 3GYB_B 3 LRTQLIAVLIDDYSN------------PWFIDLIQSLSDVLTPK--------GYRL--SVIDSLTS-Q----AGTDPITS 55 (280)
36276 T ss_dssp --CCEEEEEESCTTS------------GGGHHHHHHHHHHHGGG--------TCEE--EEECSSSS-C----SSSCHHHH
36277 T ss_pred CCCcEEEEEecCCCC------------hHHHHHHHHHHHHHHHh--------CcEE--EEEecCCC-c----ccchHHHH
36278 Confidence 457899999987542 25566777888777664 2333 33333222 1 12223333
36279
36280
36281 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
36282 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
36283 ++. +++|++|+....... .+...++|++..+...+. .+..+.+.+++...
36284 T Consensus 56 ~~~-------------------~~~d~ii~~~~~~~~-----~~~~~~~pvv~~~~~~~~------~~~~~~v~~d~~~~ 105 (280)
36285 T 3GYB_B 56 ALS-------------------MRPDGIIIAQDIPDF-----TVPDSLPPFVIAGTRITQ------ASTHDSVANDDFRG 105 (280)
36286 T ss_dssp HHT-------------------TCCSEEEEECSSSSS-----CCCBCCC---------------------CCCEECHHHH
36287 T ss_pred HHh-------------------cCCCEEEEeCCCCCC-----CCcccCCCEEEeCCCCCC------CCCCcEEEeChHHH
36288 Confidence 332 478888875433321 134568998876653321 13456677777777
36289
36290
36291 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARAVIMF 281 (908)
36292 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~viv~~ 281 (908)
36293 ++.+++++.+.+.++++++..+......+.++|.+.+++. ++.+....... ..+..+....+++++.. .++++|++.
36294 T Consensus 106 ~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~ 183 (280)
36295 T 3GYB_B 106 AEIATKHLIDLGHTHIAHLRVGSGAGLRRFESFEATMRAH-GLEPLSNDYLG-PAVEHAGYTETLALLKEHPEVTAIFSS 183 (280)
36296 T ss_dssp HHHHHHHHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHT-TCCCEECCCCS-CCCHHHHHHHHHHHHHHCTTCCEEEES
36297 T ss_pred HHHHHHHHHHCCCCeEEEEeCCCcchHHHHHHHHHHHHHC-CCCCCcccccC-CcccchHHHHHHHHHHhCCCCCEEEEC
36298 Confidence 8888888876677899998865556667778888887765 34433221111 01112233444455421 246777766
36299
36300
36301 Q NP_000836.2 282 ANEDDIRRILEAAKKLNQS 300 (908)
36302 Q Consensus 282 ~~~~~~~~~l~~~~~~g~~ 300 (908)
36303 . +..+..+++++++.|+.
36304 T Consensus 184 ~-~~~a~~~~~~~~~~g~~ 201 (280)
36305 T 3GYB_B 184 N-DITAIGALGAARELGLR 201 (280)
36306 T ss_dssp S-HHHHHHHHHHHHHHTCC
36307 T ss_pred C-HHHHHHHHHHHHHcCCC
36308 Confidence 4 34566778888877764
36309
36310
36311 No 276
36312 >5UFH_A LacI-type transcriptional regulator; Human Microbiome, structural genomics, PSI-Biology; HET: NO3, MSE; 1.45A {Bifidobacterium animalis subsp. lactis (strain AD011)}
36313 Probab=96.67 E-value=5.9e-06 Score=85.04 Aligned_cols=202 Identities=10% Similarity=0.039 Sum_probs=112.8 Template_Neff=11.300
36314
36315 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
36316 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
36317 ....+||++.|..+. .++..+..+++.++++.+ +.+. +.+...++ ....+.++.
36318 T Consensus 63 ~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~--~~~~~~~~----~~~~~~~~~ 116 (347)
36319 T 5UFH_A 63 GTTGLLGLAIFDFSQ------------PFASYLADQIIVCAREHH--------YGVI--INTYGQNE----HGLARAMRQ 116 (347)
36320 T ss_dssp ---CEEEEEESCSSS------------HHHHHHHHHHHHHHHHTT--------CEEE--EEECTTST----THHHHHHHH
36321 T ss_pred CCCCeEEEEEcCCCC------------hhHHHHHHHHHHHHHHCC--------CEEE--EEcCCCCh----HHHHHHHHH
36322 Confidence 467889999986432 245567777777776642 2333 33332221 122233333
36323
36324
36325 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
36326 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
36327 ++. .++|++|+...... .....+...++|+|..+...+ ......+..++...
36328 T Consensus 117 ~~~-------------------~~~d~ii~~~~~~~--~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~~ 168 (347)
36329 T 5UFH_A 117 ANN-------------------LAADGWIVFADHAM--GQHSKMLDQSYPLVLTGDWDA-------YGKVDQVTMPNVEA 168 (347)
36330 T ss_dssp GGG-------------------SSCSEEEEECCSCC--CC--CTTCCSSCEEEESSSCC-------TTSSEEEECCHHHH
36331 T ss_pred HHh-------------------cCCCEEEEEccccc--chhHHHHhcCCCEEEeCCccc-------CCCCcEEEcCHHHH
36332 Confidence 332 47888876544322 223445567999997765432 13455666777777
36333
36334
36335 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEGN------------YGESGVEAFTQISREIGGVCIAQSQKIPRE-PRPGEFEKIIKRL 269 (908)
36336 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~~------------~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~-~~~~~~~~~~~~l 269 (908)
36337 ++.+++++.+.+.++++++..+.. +...+.++|++.+++. ++.+.....+... .+..+....++++
36338 T Consensus 169 ~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (347)
36339 T 5UFH_A 169 MRYTTNRLLDSGYRSIALFGADGSLGARHYRQATEGTQELRVQGYMQAYEEH-GIEARMDMLFSGGLLTSDSGVRATNLM 247 (347)
36340 T ss_dssp HHHHHHHHHHTTCCCEEEESSCGGGCHHHHHHCCSCHHHHHHHHHHHHHHHT-TCCCCGGGEECCSSSSHHHHHHHHHHH
36341 T ss_pred HHHHHHHHHHcCCCeEEEEcCCcccchhhhhccCcccHHHHHHHHHHHHHHC-CCCCCHHHeecCCCCChHHHHHHHHHH
36342 Confidence 888888886678889999985432 4456778888888775 3443221111100 1111223344444
36343
36344
36345 Q NP_000836.2 270 LE-TPNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
36346 Q Consensus 270 ~~-~~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36347 +. ..++|+|++.. +..+..+++++++.|+.
36348 T Consensus 248 ~~~~~~~~ai~~~~-d~~a~~~~~~l~~~g~~ 278 (347)
36349 T 5UFH_A 248 MDQGVRPDAIICLN-DAMALGALHQLQVRGIR 278 (347)
36350 T ss_dssp HHTTCCCSEEEESS-HHHHHHHHHHHHHTTCC
36351 T ss_pred HHcCCCCCEEEECC-HHHHHHHHHHHHHCCCC
36352 Confidence 32 13678887764 44567778888887764
36353
36354
36355 No 277
36356 >3CTP_A Periplasmic binding protein/LacI transcriptional regulator; STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
36357 Probab=96.67 E-value=6e-06 Score=84.26 Aligned_cols=198 Identities=13% Similarity=0.148 Sum_probs=114.7 Template_Neff=11.500
36358
36359 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
36360 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
36361 ..+..+||++.|..+. .++..+..+++.++++.+ +++.+.+...+. ....+.++
36362 T Consensus 57 ~~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~ 110 (330)
36363 T 3CTP_A 57 TKNSKTIGLMVPNISN------------PFFNQMASVIEEYAKNKG----------YTLFLCNTDDDK----EKEKTYLE 110 (330)
36364 T ss_dssp ---CCEEEEEESCTTS------------HHHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHHH
36365 T ss_pred cCCCCEEEEEeCCCCC------------HHHHHHHHHHHHHHHHCC----------CEEEEEeCCCCH----HHHHHHHH
36366 Confidence 3567899999986432 245567777777776642 234444543332 22233344
36367
36368
36369 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
36370 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
36371 +++. .++|++|+...+.. ..+...++|+|..+...+ +..+++..++..
36372 T Consensus 111 ~~~~-------------------~~~d~ii~~~~~~~-----~~~~~~~ipvv~~~~~~~--------~~~~~v~~d~~~ 158 (330)
36373 T 3CTP_A 111 VLQS-------------------HRVAGIIASRSQCE-----DEYANIDIPVVAFENHIL--------DNIITISSDNYN 158 (330)
36374 T ss_dssp HHHH-------------------TTCSEEEEETCCCS-----GGGTTCCSCEEEESSCCC--------TTSCEEEECHHH
36375 T ss_pred HHHH-------------------CCCCEEEEeCCCCh-----HHHhcCCCCEEEEcCCCc--------cCCcEEEcCcHH
36376 Confidence 3332 47888886543322 235667999998765432 245667777777
36377
36378
36379 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVI 279 (908)
36380 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv 279 (908)
36381 .+..+++++.+.++++++++..+. .+...+.+++++.+++. ++.+.... ...+.+..+....++.+....++|+|+
36382 T Consensus 159 ~g~~~~~~l~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (330)
36383 T 3CTP_A 159 GGRMAFDHLYEKGCRKILHIKGPEVFEATELRYKGFLDGARAK-DLEIDFIE-FQHDFQVKMLEEDINSMKDIVNYDGIF 236 (330)
36384 T ss_dssp HHHHHHHHHHHTTCCSEEEEECCTTCHHHHHHHHHHHHHHHHT-TCCCEEEE-CSSSCCGGGGGCCCTTGGGGGGSSEEE
36385 T ss_pred HHHHHHHHHHHcCCCcEEEEeCCccchhHHHHHHHHHHHHHHC-CCCCCeEE-ecccccHHHHHHHHHHhhhcCCCCEEE
36386 Confidence 788888888777888999988543 35566778888887764 34432211 110011122333444443223578777
36387
36388
36389 Q NP_000836.2 280 MFANEDDIRRILEAAKKLNQS 300 (908)
36390 Q Consensus 280 ~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36391 +.. +..+..+++++++.|+.
36392 T Consensus 237 ~~~-~~~a~~~~~al~~~g~~ 256 (330)
36393 T 3CTP_A 237 VFN-DIAAATVMRALKKRGVS 256 (330)
36394 T ss_dssp ESS-HHHHHHHHHHHHHTTCC
36395 T ss_pred EcC-HHHHHHHHHHHHHCCCC
36396 Confidence 764 44566778888887763
36397
36398
36399 No 278
36400 >3G85_A Transcriptional regulator (LacI family); Transcription regulator, PSI-II, 11230o, Structural; 1.84A {Clostridium acetobutylicum ATCC 824}
36401 Probab=96.67 E-value=6e-06 Score=82.30 Aligned_cols=204 Identities=12% Similarity=0.083 Sum_probs=115.0 Template_Neff=11.700
36402
36403 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
36404 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
36405 ..++..+||++.|.... ..++.....+++.++++.+ +.+++.+.+...+... ...
36406 T Consensus 7 ~~~~~~~I~~i~~~~~~-----------~~~~~~~~~g~~~a~~~~g--------~~~~~~~~~~~~~~~~----~~~-- 61 (289)
36407 T 3G85_A 7 NSQSKPTIALYWSSDIS-----------VNIISRFLRGLQSKLAKQN--------YNYNVVICPYKTDCLH----LEK-- 61 (289)
36408 T ss_dssp ----CCEEEEEEETTSC-----------GGGHHHHHHHHHHHHHHTT--------TCSEEEEEEECTTCGG----GCG--
36409 T ss_pred cCCCCCeEEEEeCCCCC-----------cHHHHHHHHHHHHHHHHcC--------CCcEEEEEEcCCChHH----Hhh--
36410 Confidence 45578999999983211 1356677888888887752 2345555554433211 111
36411
36412
36413 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
36414 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
36415 +.+.. .++|++|+...+......... ...++|+|..+... +.+..+..++.
36416 T Consensus 62 ~~~~~-------------------~~~d~ii~~~~~~~~~~~~~~-~~~~ipvv~~~~~~---------~~~~~v~~d~~ 112 (289)
36417 T 3G85_A 62 GISKE-------------------NSFDAAIIANISNYDLEYLNK-ASLTLPIILFNRLS---------NKYSSVNVDNY 112 (289)
36418 T ss_dssp GGSTT-------------------TCCSEEEESSCCHHHHHHHHH-CCCSSCEEEESCCC---------SSSEEEEECHH
36419 T ss_pred chhhh-------------------cCCCEEEEecCCcccHHHHHH-hCCCCCEEEeCCCc---------cCCCEEEeCcH
36420 Confidence 01111 578888865443322223333 46789999877532 23456667777
36421
36422
36423 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARA 277 (908)
36424 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
36425 ..++.+++++.+.+.++++++..+. .....+.++|++.+++. ++.+..........+..+..+.+++++. ..++++
36426 T Consensus 113 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 191 (289)
36427 T 3G85_A 113 KMGEKASLLFAKKRYKSAAAILTESLNDAMDNRNKGFIETCHKN-GIKISENHIIAAENSIHGGVDAAKKLMKLKNTPKA 191 (289)
36428 T ss_dssp HHHHHHHHHHHHTTCCBCEEEECCCSSHHHHHHHHHHHHHHHHT-TCBCCGGGEEECCSSHHHHHHHHHHHTTSSSCCSE
36429 T ss_pred HHHHHHHHHHHHcCCCeeEEEecCCCChHHHHHHHHHHHHHHHc-CCCCCccceEEcCCChHHHHHHHHHHHhcCCCCCE
36430 Confidence 7788888888777888998887432 34566778888888765 3443321111100111223344455432 135777
36431
36432
36433 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
36434 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36435 |++.. +..+..+++++++.|+.
36436 T Consensus 192 i~~~~-~~~a~~~~~~l~~~g~~ 213 (289)
36437 T 3G85_A 192 LFCNS-DSIALGVISVLNKRQIS 213 (289)
36438 T ss_dssp EEESS-HHHHHHHHHHHHHTTCC
36439 T ss_pred EEECC-HHHHHHHHHHHHHCCCC
36440 Confidence 77664 44566778888877764
36441
36442
36443 No 279
36444 >3H5O_B Transcriptional regulator GntR; 11234b, transcription regulator, GntR, Chromobacterium; HET: MSE, SO4; 2.3A {Chromobacterium violaceum}
36445 Probab=96.67 E-value=6.1e-06 Score=84.58 Aligned_cols=203 Identities=14% Similarity=0.107 Sum_probs=113.6 Template_Neff=11.300
36446
36447 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
36448 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
36449 ..+..+||++.|..+. .++.....+++.++++.+ +++.+.|+..++ +...+.++
36450 T Consensus 59 ~~~~~~I~~v~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~~ 112 (339)
36451 T 3H5O_B 59 SAKSRTVLVLIPSLAN------------TVFLETLTGIETVLDAAG----------YQMLIGNSHYDA----GQELQLLR 112 (339)
36452 T ss_dssp ----CEEEEEESCSTT------------CTTHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHHH
36453 T ss_pred cCCCCEEEEEEcCCCC------------hhHHHHHHHHHHHHHHcC----------CeEEEEeCCCCh----hHHHHHHH
36454 Confidence 3567899999986542 245567778877776643 233444543332 22233344
36455
36456
36457 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
36458 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
36459 +++. .++|++|+...+.. ......+...++|+|..+...+ +.++.+..++..
36460 T Consensus 113 ~l~~-------------------~~~d~ii~~~~~~~-~~~~~~~~~~~ipvv~~~~~~~--------~~~~~v~~d~~~ 164 (339)
36461 T 3H5O_B 113 AYLQ-------------------HRPDGVLITGLSHA-EPFERILSQHALPVVYMMDLAD--------DGRCCVGFSQED 164 (339)
36462 T ss_dssp HHHT-------------------TCCSEEEEESSCCC-TTHHHHHHHTTCCEEEEESCCS--------SSCCEEECCHHH
36463 T ss_pred HHHh-------------------cCCCEEEEeCCCCC-hHHHHHHHhCCCCEEEEccCCC--------CCCcEEEcCHHH
36464 Confidence 4332 46888886543332 3344556678999998764321 345566677777
36465
36466
36467 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASE-GNYGESGVEAFTQISREIGGVCIAQSQKIPR-EPRPGEFEKIIKRLLE-TPNARAV 278 (908)
36468 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~-~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~-~~~~~~~~~~~~~l~~-~~~~~vi 278 (908)
36469 .++.+++++.+.+.++++++... +.....+.++|++.+++. +..+........ ..+.......+++++. ..++|+|
36470 T Consensus 165 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~r~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~I 243 (339)
36471 T 3H5O_B 165 AGAAITRHLLSRGKRRIGFLGAQLDERVMKRLDGYRAALDAA-DCRDAGLEWLDPQPSSMQMGADMLDRALAERPDCDAL 243 (339)
36472 T ss_dssp HHHHHHHHHHHTTCCSEEEEEESCCHHHHHHHHHHHHHHHHH-TCCCGGGEEEECSCCCHHHHHHHHHHHHHHCTTCCEE
36473 T ss_pred HHHHHHHHHHHCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHC-CCcccCCccccCCCCCHHHHHHHHHHHHHhCCCCCEE
36474 Confidence 78888888876688899999854 334556777888877764 232211111110 0011112233333332 1356777
36475
36476
36477 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
36478 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36479 ++.. +..+..+++++++.|+.
36480 T Consensus 244 ~~~~-~~~a~~~~~~l~~~g~~ 264 (339)
36481 T 3H5O_B 244 FCCN-DDLAIGALARSQQLGIA 264 (339)
36482 T ss_dssp EESS-HHHHHHHHHHHHHTTCC
36483 T ss_pred EECC-HHHHHHHHHHHHHcCCC
36484 Confidence 7664 44566778888877763
36485
36486
36487 No 280
36488 >5YSZ_A Transcriptional regulator, LacI family; transcriptional regulator, cellulase gene regulator; HET: CBI, GOL; 1.631A {Thermobifida fusca YX}
36489 Probab=96.62 E-value=7.5e-06 Score=84.75 Aligned_cols=148 Identities=11% Similarity=0.080 Sum_probs=89.0 Template_Neff=11.100
36490
36491 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASE 224 (908)
36492 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~ 224 (908)
36493 .++|++|+...+... .....+...++|+|..+...+. ..+.++.+..++...+..+++++.+.+.++++++..+
36494 T Consensus 143 ~~~d~ii~~~~~~~~-~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~~v~~d~~~~~~~~~~~l~~~g~~~i~~l~~~ 216 (360)
36495 T 5YSZ_A 143 QHVDGVLLLSLHRDD-PLPQMLDEAGVPYVYGGRPLGV-----PEEQVSYVDIDNIGGGRQATQRLIETGHRRIATIAGP 216 (360)
36496 T ss_dssp SCCSEEEEESCCTTC-SHHHHHHHHTCCEEEESCCTTS-----CGGGCCEEEECHHHHHHHHHHHHHHTTCSSEEEEECC
36497 T ss_pred CCCCEEEEECCCCCC-chHHHHHHcCCCEEEeCCCCCC-----CcccCcEEEcCcHHHHHHHHHHHHHcCCCcEEEEeCC
36498 Confidence 578888765433332 3445566789999987754321 1245667777777788888888876788899999854
36499
36500
36501 Q NP_000836.2 225 GN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
36502 Q Consensus 225 ~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36503 .. +...+.++|++.+++. ++.+........+.+..+....++++++ ..++|+|++.. +..+..+++++++.|..
36504 T Consensus 217 ~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~daI~~~~-d~~a~~~~~al~~~g~~ 293 (360)
36505 T 5YSZ_A 217 QDMVAGVERLQGYREALLAA-GMEYDETLVSYGDFTYDSGVAAMRELLDRAPDVDAVFAAS-DLMGLAALRVLRASGRR 293 (360)
36506 T ss_dssp TTSHHHHHHHHHHHHHHHHT-TCCCCGGGEEECCSSHHHHHHHHHHHHHHCTTCCEEEESS-HHHHHHHHHHHHHTTCC
36507 T ss_pred cccHHHHHHHHHHHHHHHHC-CCCCCHhheeecCCCHHHHHHHHHHHHHhCCCCCEEEECC-hHHHHHHHHHHHHcCCC
36508 Confidence 33 5566778888887765 3433211111100112233444555542 12477777664 44566778888877763
36509
36510
36511 No 281
36512 >3MIZ_A Putative transcriptional regulator protein, LacI; Lacl family, Protein Structure Initiative; HET: MSE; 1.91A {Rhizobium etli}
36513 Probab=96.58 E-value=8.6e-06 Score=81.66 Aligned_cols=206 Identities=13% Similarity=0.104 Sum_probs=115.6 Template_Neff=11.800
36514
36515 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
36516 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
36517 ...+..+||++.|..... .+...+..+++.++++.+ +++.+.+...++ +...+.+
36518 T Consensus 9 ~~~~~~~I~~v~~~~~~~-----------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~~ 63 (301)
36519 T 3MIZ_A 9 RSSRSNTFGIITDYVSTT-----------PYSVDIVRGIQDWANANG----------KTILIANTGGSS----EREVEIW 63 (301)
36520 T ss_dssp ---CCCEEEEEESSTTTC-----------CSCHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHHH
36521 T ss_pred hcCCCCEEEEEecCCCCC-----------chHHHHHHHHHHHHHHcC----------CeEEEEecCCCH----HHHHHHH
36522 Confidence 456789999999854211 245567778777776642 233444443332 2223334
36523
36524
36525 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
36526 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
36527 ++++. +++|++|+....... ....+...++|+|..+...+. .+.++.+..++.
36528 T Consensus 64 ~~~~~-------------------~~~d~ii~~~~~~~~--~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~d~~ 116 (301)
36529 T 3MIZ_A 64 KMFQS-------------------HRIDGVLYVTMYRRI--VDPESGDVSIPTVMINCRPQT------RELLPSIEPDDY 116 (301)
36530 T ss_dssp HHHHH-------------------TTCSEEEEEEEEEEE--CCCCCTTCCCCEEEEEEECSS------TTSSCEEEECHH
36531 T ss_pred HHHHh-------------------CCCCEEEEecCCccc--CCcccccCCCCEEEEcCCCCC------cccCCcceeChH
36532 Confidence 43332 478888865433221 222456789999987764321 234567777777
36533
36534
36535 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPR-----EPRPGEFEKIIKRLLET- 272 (908)
36536 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~-----~~~~~~~~~~~~~l~~~- 272 (908)
36537 ..++.+++++.+.+.++++++..+. .....+.+++++.+++. ++.+.....+.. ..+..+....++++++.
36538 T Consensus 117 ~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (301)
36539 T 3MIZ_A 117 QGARDLTRYLLERGHRRIGYIRLNPILLGAELRLDAFRRTTSEF-GLTENDLSISLGMDGPVGAENNYVFAAATEMLKQD 195 (301)
36540 T ss_dssp HHHHHHHHHHHTTTCCSEEEEECCTTSHHHHHHHHHHHHHHHHH-TCCGGGEEEEECEESSTTSCEECHHHHHHHHHTST
36541 T ss_pred HHHHHHHHHHHHCCCCcEEEEecCcccccHHHHHHHHHHHHHHc-CCChhhceEEecCCCCCCcccchHHHHHHHHHhcC
36542 Confidence 7888888888666788999988533 23456777888887765 344321111100 00111122344554421
36543
36544
36545 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
36546 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36547 .++++|++.. +..+..+++++++.|+.
36548 T Consensus 196 ~~~~~i~~~~-~~~a~~~~~~l~~~g~~ 222 (301)
36549 T 3MIZ_A 196 DRPTAIMSGN-DEMAIQIYIAAMALGLR 222 (301)
36550 T ss_dssp TCCSEEEESS-HHHHHHHHHHHHTTTCC
36551 T ss_pred CCCCEEEECC-HHHHHHHHHHHHHCCCC
36552 Confidence 2477777664 44566777777777763
36553
36554
36555 No 282
36556 >1TJY_A sugar transport protein; PROTEIN-LIGAND COMPLEX, SIGNALING PROTEIN; HET: PAV; 1.3A {Salmonella typhimurium} SCOP: c.93.1.1
36557 Probab=96.56 E-value=9.4e-06 Score=82.17 Aligned_cols=210 Identities=10% Similarity=-0.009 Sum_probs=113.6 Template_Neff=11.200
36558
36559 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDT-CSRDTYALEQSLTFVQA 122 (908)
36560 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~-~~~~~~a~~~~~~~~~~ 122 (908)
36561 ++++||++.|..+. .++.....+++.++++.+ +++. +.+. ..+. ....+.+++
36562 T Consensus 2 ~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~g--------~~~~--~~~~~~~~~----~~~~~~~~~ 55 (316)
36563 T 1TJY_A 2 SAERIAFIPKLVGV------------GFFTSGGNGAQEAGKALG--------IDVT--YDGPTEPSV----SGQVQLVNN 55 (316)
36564 T ss_dssp CCCEEEEECSSSSS------------HHHHHHHHHHHHHHHHHT--------CEEE--ECCCSSCCH----HHHHHHHHH
36565 T ss_pred CCeEEEEEecCCCC------------HHHHHHHHHHHHHHHHhC--------CEEE--EECCCCCCH----HHHHHHHHH
36566 Confidence 46789999987542 255677788888877752 3333 3333 2222 223334444
36567
36568
36569 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAAS-SVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP-PDS 200 (908)
36570 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s-~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~-~~~ 200 (908)
36571 ++. .+++++++...+ .........+...++|+|......+. .+..+.+.. ++.
36572 T Consensus 56 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~------~~~~~~v~~~d~~ 110 (316)
36573 T 1TJY_A 56 FVN-------------------QGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTKP------ECRSYYINQGTPK 110 (316)
36574 T ss_dssp HHH-------------------TTCSEEEECCSSSSTTHHHHHHHHHTTCEEEEESSCCCG------GGCSEEEESCCHH
36575 T ss_pred HHH-------------------cCCCEEEEcCCChhhhHHHHHHHHHCCCEEEEECCCCCc------hhceeEEecCCHH
36576 Confidence 332 467877764333 22234455667789999987764331 122334444 455
36577
36578
36579 Q NP_000836.2 201 YQAQAMVDIVTAL-G--WNYVSTLAS--EGNYGESGVEAFTQISREIG-GVCIAQSQKIPREPRPGEFEKIIKRLLET-P 273 (908)
36580 Q Consensus 201 ~~~~~~~~~l~~~-~--~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~ 273 (908)
36581 ..++.+++++.+. + .++|+++.. ++.....+.++|++.+++.. ++.+....... .+..+....+++++.. .
36582 T Consensus 111 ~~g~~~~~~l~~~~~~~~~~v~~l~~~~~~~~~~~r~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~ 188 (316)
36583 T 1TJY_A 111 QLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPGWEIVTTQFGY--NDATKSLQTAEGIIKAYP 188 (316)
36584 T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEEESCSSCHHHHHHHHHHHHHHHHHCTTEEEEEEEECT--TCHHHHHHHHHHHHHHCS
36585 T ss_pred HHHHHHHHHHHHHhCCCCCeEEEEECCCCcHHHHHHHHHHHHHHHHHCCCcEEEeeccCC--CCHHHHHHHHHHHHHHCC
36586 Confidence 6677777777543 5 678998875 33455667778888776531 23333211111 1112233445555421 2
36587
36588
36589 Q NP_000836.2 274 NARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
36590 Q Consensus 274 ~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
36591 ++++|+... +..+..+++++++.|+. ++.+++.
36592 T Consensus 189 ~~~~i~~~~-~~~a~~~~~al~~~g~~-~v~v~g~ 221 (316)
36593 T 1TJY_A 189 DLDAIIAPD-ANALPAAAQAAENLKRN-NLAIVGF 221 (316)
36594 T ss_dssp SCCEEEECS-TTHHHHHHHHHHHTTCC-SCEEEEB
36595 T ss_pred CCCEEEecC-CCchHHHHHHHHHcCCC-CcEEEEe
36596 Confidence 456665543 44556677787777762 3334443
36597
36598
36599 No 283
36600 >4O5A_A LacI family transcription regulator; structural genomics, PSI-Biology, protein structure; HET: SO4, GOL; 1.777A {Bifidobacterium animalis subsp. lactis}
36601 Probab=96.55 E-value=9.7e-06 Score=83.19 Aligned_cols=207 Identities=12% Similarity=0.108 Sum_probs=115.3 Template_Neff=11.600
36602
36603 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
36604 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
36605 ..+..+||++.|.++.... ...++..+..+++.++++.+ + ++.+.+...+. ...+.+.
36606 T Consensus 65 ~~~~~~Igvv~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~g--------~--~~~~~~~~~~~-----~~~~~~~ 122 (345)
36607 T 4O5A_A 65 QSRTRRIGLVLGYDPQLLS-------AEPYIMRLISGLGSALEERD--------Y--SLLVRMSMDDD-----DEVSILE 122 (345)
36608 T ss_dssp -CCCCEEEEEEECC---------------CHHHHHHHHHHHHGGGT--------C--EEEEEEECSSS-----HHHHHHH
36609 T ss_pred cCCCCEEEEEEeCChHHhc-------cChHHHHHHHHHHHHHHHCC--------C--EEEEEecCCCc-----cHHHHHH
36610 Confidence 4567899999987531000 01245567777777776542 2 23333332221 1112222
36611
36612
36613 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
36614 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
36615 +++. ..++|++|+...+.....+..+....++|+|..+...+ .+.++++.+++..
36616 T Consensus 123 ~~~~------------------~~~~d~ii~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~ 177 (345)
36617 T 4O5A_A 123 DWIA------------------TGNVDALLLLNLEIGDPRIELMKNNPQMPCLALADSSL-------TSGLPTLMSDDAA 177 (345)
36618 T ss_dssp HHHH------------------HTCSSEEEECSCCTTCHHHHHHHTCTTSCEEEEECGGG-------TTTSCEEECCHHH
36619 T ss_pred HHHH------------------hCCCCEEEEeCCcCCChHHHHHHhCCCCCEEEEccccc-------CCCCCEEEeCcHH
36620 Confidence 2221 15788888755443332222333357999988765432 1345667777778
36621
36622
36623 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARAV 278 (908)
36624 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vi 278 (908)
36625 .+..+++++.+.+.++++++..... ....+.++|.+.+++. ++.+.. .... .+..+....+++++. ..++|+|
36626 T Consensus 178 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~l~~~-~~~~~~-~~~~--~~~~~~~~~~~~~l~~~~~~dai 253 (345)
36627 T 4O5A_A 178 ASGTMIRHLALFGHKNIARVAGPEELGHSYIRDAAFSEITTEL-GMRYRC-LHTD--YTPESGAEATKRLLSVEPRPTAI 253 (345)
36628 T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTTSTTHHHHHHHHHHHHHHT-TCEEEE-EECC--SCHHHHHHHHHHHHHSSSCCSEE
36629 T ss_pred HHHHHHHHHHHcCCCeEEEEeCchhccchHHHHHHHHHHHHHh-CCceEE-EecC--CCHHHHHHHHHHHhcCCCCCCEE
36630 Confidence 8888888887778889999985332 4556778888888765 344321 1111 111223344455432 2367888
36631
36632
36633 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
36634 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36635 ++.. +..+..+++++++.|+.
36636 T Consensus 254 ~~~~-d~~a~~~~~~l~~~g~~ 274 (345)
36637 T 4O5A_A 254 IYDN-DVMALAGESVASVKGVR 274 (345)
36638 T ss_dssp EESS-HHHHHHHHHHHHHHTCC
36639 T ss_pred EECC-HHHHHHHHHHHHHcCCC
36640 Confidence 7764 44566788888887763
36641
36642
36643 No 284
36644 >3UUG_B Multiple sugar-binding periplasmic receptor ChvE; periplasmic binding protein, SUGAR-BINDING PROTEIN; HET: BDP; 1.75A {Agrobacterium tumefaciens}
36645 Probab=96.50 E-value=1.2e-05 Score=81.98 Aligned_cols=206 Identities=10% Similarity=0.011 Sum_probs=114.2 Template_Neff=11.400
36646
36647 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
36648 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
36649 +..+||++.|.... .++.....+++.++++.| + ++.+.+...+. +...+.++++
36650 T Consensus 2 ~~~~Ig~v~~~~~~------------~~~~~~~~~~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~~~~l 55 (330)
36651 T 3UUG_B 2 DKGSVGIAMPTKSS------------ARWIDDGNNIVKQLQEAG--------Y--KTDLQYADDDI----PNQLSQIENM 55 (330)
36652 T ss_dssp CCCEEEEEECCSSS------------THHHHHHHHHHHHHHHTT--------C--EEEEEECTTCH----HHHHHHHHHH
36653 T ss_pred CCceEEEEcCCCCC------------HHHHHHhhHHHHHHHHcC--------C--EEEEEecCCCH----HHHHHHHHHH
36654 Confidence 46789999987521 245567778887777653 2 33344433332 1223333433
36655
36656
36657 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
36658 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
36659 +. .+++++|+...+... ......+...++|+|..+...+. ..++++++.+++...
36660 T Consensus 56 ~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~~v~~d~~~~ 111 (330)
36661 T 3UUG_B 56 VT-------------------KGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLIRN-----SGDVSYYATFDNFQV 111 (330)
36662 T ss_dssp HH-------------------HTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSCCCS-----CTTCCEEEEECHHHH
36663 T ss_pred Hh-------------------cCCCEEEEecCCccchHHHHHHHHHCCCEEEEEcCCCCC-----CCCccEEEEeChHHH
36664 Confidence 32 478887765433322 23445566789999987754331 123456677777777
36665
36666
36667 Q NP_000836.2 203 AQAMVDIVTA-------LGWNYVSTLAS--EGNYGESGVEAFTQISREIGG-VCIAQSQK-------IPREPRPGEFEKI 265 (908)
36668 Q Consensus 203 ~~~~~~~l~~-------~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~-i~v~~~~~-------~~~~~~~~~~~~~ 265 (908)
36669 +..+++++.+ .+.++++++.. ++..+..+.++|++.+++.+. ..+..... .....+..+....
36670 T Consensus 112 ~~~~~~~l~~~~~~~~~~g~~~i~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (330)
36671 T 3UUG_B 112 GVLQATSITDKLGLKDGKGPFNIELFGGSPDDNNAFFFYDGAMSVLKPYIDSGKLVVKSGQMGMDKVGTLRWDPATAQAR 191 (330)
36672 T ss_dssp HHHHHHHHHHHHTGGGTCCCEEEEECCCCTTCHHHHHHHHHHHHHHHHHHHHTSEECTTCCCSHHHHCCGGGCHHHHHHH
36673 T ss_pred HHHHHHHHHHHhcccCCCCCcEEEEEecCCCCccHHHHHHHHHHHhHHhhhcCcEEEeeCCcccccccccCCCHHHHHHH
36674 Confidence 7777777654 46778998873 334556677788877765421 11211100 0000111223344
36675
36676
36677 Q NP_000836.2 266 IKRLLET----PNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
36678 Q Consensus 266 ~~~l~~~----~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36679 +++++.. .++++|++.. +..+..+++++++.|+.
36680 T Consensus 192 ~~~~l~~~~~~~~~~ai~~~~-~~~a~~~~~al~~~g~~ 229 (330)
36681 T 3UUG_B 192 MDNLLSAYYTDAKVDAVLSPY-DGLSIGIISSLKGVGYG 229 (330)
36682 T ss_dssp HHHHHHHHCSSSCCCEEECSS-HHHHHHHHHHHHHTTCS
36683 T ss_pred HHHHHHhhcCCCCccEEEeCC-cHHHHHHHHHHHhCCCC
36684 Confidence 4555421 2367776664 44566778888877764
36685
36686
36687 No 285
36688 >3LKV_A uncharacterized CONSERVED DOMAIN PROTEIN; ATPase Binding Cassette, PSI, MCSG; HET: PHE; 2.2A {Vibrio cholerae}
36689 Probab=96.46 E-value=1.3e-05 Score=80.10 Aligned_cols=215 Identities=8% Similarity=0.110 Sum_probs=114.8 Template_Neff=12.100
36690
36691 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
36692 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
36693 .....++||++.|... .++.....+++.++++.+.. .|+++++.+.|+..++. ...+.+
36694 T Consensus 4 ~~~~~~~I~~v~~~~~-------------~~~~~~~~~~~~~~~~~g~~----~g~~~~~~~~~~~~~~~----~~~~~~ 62 (302)
36695 T 3LKV_A 4 IMAKTAKVAVSQIVEH-------------PALDATRQGLLDGLKAKGYE----EGKNLEFDYKTAQGNPA----IAVQIA 62 (302)
36696 T ss_pred ccCCCeEEEEEcCCCC-------------HHHHHHHHHHHHHHHHhCCC----CCceEEEEEEcCCCCHH----HHHHHH
36697 Confidence 4456889999998642 24556667777666654321 24567776666544322 222333
36698
36699
36700 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSD-----NTRYDFFSRV 195 (908)
36701 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~-----~~~~~~~~~~ 195 (908)
36702 +++.. .+++++|+.... ....... . ..++|+|......+.... .....+++.+
36703 T Consensus 63 ~~~~~-------------------~~~d~ii~~~~~-~~~~~~~-~-~~~ipvv~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (302)
36704 T 3LKV_A 63 RQFVG-------------------ENPDVLVGIATP-TAQALVS-A-TKTIPIVFTAVTDPVGAKLVKQLEQPGKNVTGL 120 (302)
36705 T ss_pred HHHHH-------------------CCCCEEEEeCCc-hHHHHHH-H-hcCCCEEEEcCCCCCccchhhcCCCCCCcEEEc
36706 Confidence 33322 478888874322 2222222 2 679999987754432110 0012233333
36707
36708
36709 Q NP_000836.2 196 VPPDSYQAQAMVDIVTAL--GWNYVSTLASEGN-YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
36710 Q Consensus 196 ~~~~~~~~~~~~~~l~~~--~~~~v~ii~~~~~-~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
36711 +....++.+++++.+. +.+++++++.+.. ++..+.+++++.+++. ++.+...... +..+....++++.
36712 T Consensus 121 --~~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~-- 191 (302)
36713 T 3LKV_A 121 --SDLSPVEQHVELIKEILPNVKSIGVVYNPGEANAVSLMELLKLSAAKH-GIKLVEATAL----KSADVQSATQAIA-- 191 (302)
36714 T ss_pred --CHHHHHHHHHHHHHHHCCCCcEEEEEeCCCChhHHHHHHHHHHHHHcC-CCeEeEeeCC----CHHHHHHHHHHHC--
36715 Confidence 3333456667776554 7789999985443 4556677788777664 3544322111 1123444455443
36716
36717
36718 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGS 308 (908)
36719 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~~ 308 (908)
36720 .++++|++..+ ..+..+++++.+.+...++.+++.
36721 T Consensus 192 ~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~i~i~~~ 226 (302)
36722 T 3LKV_A 192 EKSDVIYALID-NTVASAIEGMIVAANQAKTPVFGA 226 (302)
36723 T ss_pred CCCCEEEECCc-hHHHHHHHHHHHCCCCCCCcEEEe
36724 Confidence 36788876653 345556666666554323444443
36725
36726
36727 No 286
36728 >4KQC_A Periplasmic binding protein/LacI transcriptional regulator; structural genomics, APC110243, ABC transporter; HET: NO3; 1.62A {Brachyspira murdochii}
36729 Probab=96.39 E-value=1.8e-05 Score=80.11 Aligned_cols=209 Identities=12% Similarity=0.062 Sum_probs=109.7 Template_Neff=11.600
36730
36731 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
36732 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
36733 ++..+||++.|.... .++..+..+++.++++. |+++.+...++..+. ....+.+++
36734 T Consensus 2 ~~~~~I~~v~~~~~~------------~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~----~~~~~~i~~ 57 (319)
36735 T 4KQC_A 2 NADPYIAVVSKGFQH------------KFWVTVRDGAEAAAKQN--------GVKISFVGPETESDS----KIQQDLLDS 57 (319)
36736 T ss_dssp CSSCEEEEECCCSSS------------THHHHHHHHHHHHHHHH--------TCEEEEECCSSTTCH----HHHHHHHHH
36737 T ss_pred CCCCeEEEEecCCCC------------HHHHHHHHHHHHHHHHc--------CCEEEEeCCCCCCCH----HHHHHHHHH
36738 Confidence 356889999984321 24566777887777764 344544433321221 123334444
36739
36740
36741 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
36742 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
36743 ++. .++|++|+...+.........+...++|+|..+...+... .....++.+.+++...
36744 T Consensus 58 l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~--~~~~~~~~v~~d~~~~ 116 (319)
36745 T 4KQC_A 58 EIN-------------------KNPDAIAFAAVTGDFTEQIKRIKEKNIPLIGFDSGILPDQ--AQGAVLATASTDNRAA 116 (319)
36746 T ss_dssp HHH-------------------TCCSCEEECCCSSCCHHHHHHHHHTTCCEEEETTCSCGGG--CTTCEEEEEECCHHHH
36747 T ss_pred HHH-------------------hCCCEEEEcCCCcchHHHHHHHHHCCCCEEEEcCCCCccc--ccCceeEEEEcChHHH
36748 Confidence 432 4788887654433222334455678999998876433211 0123456677777777
36749
36750
36751 Q NP_000836.2 203 AQAMVDIVTALGWN-----------YVSTLASE-GNYGESGVEAFTQISREIGGVCIA-------QSQKIPREPRPGEFE 263 (908)
36752 Q Consensus 203 ~~~~~~~l~~~~~~-----------~v~ii~~~-~~~~~~~~~~~~~~~~~~~~i~v~-------~~~~~~~~~~~~~~~ 263 (908)
36753 ++.+++++.+.+.+ +++++... +.....+.++|++.+++.+ .... .........+..+..
36754 T Consensus 117 g~~~~~~l~~~~~~~i~~~~~~~~~~v~~~~~~~~~~~~~r~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (319)
36755 T 4KQC_A 117 AAIVADKMFEALKTRIAAFTSDNKAKIAVLQLDNSDTGIGRAEGFVKRFTELA-DGDAATAGKYALQVIVPTTQNEADIA 195 (319)
36756 T ss_dssp HHHHHHHHHHHHHHHHHTSBTTBCEEEEEECCCSSHHHHHHHHHHHHHHHHHH-HHSTTTTTSEEEEEECCSSSSHHHHH
36757 T ss_pred HHHHHHHHHHHHHHHhhhcCCCCcEEEEEEEeCCCcchHHHHHHHHHHHHhcc-CcchhhCcceeeEEEccCCCCHHHHH
36758 Confidence 88888877554443 34444422 3345566777877776642 2210 000000001111222
36759
36760
36761 Q NP_000836.2 264 KIIKRLLETPNARAVIMFANEDDIRRILEAAKKLNQ 299 (908)
36762 Q Consensus 264 ~~~~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
36763 ..++.+. ..++++|++.. +..+..+++++++.|.
36764 T Consensus 196 ~~~~~l~-~~~~~~i~~~~-~~~a~~~~~a~~~~g~ 229 (319)
36765 T 4KQC_A 196 NEVNALR-GKSVLGIYLSN-EAMARGFLVVYKSAEA 229 (319)
36766 T ss_dssp HHHHTTT-TTTCSEEEECS-HHHHHHHHHHCCBCST
36767 T ss_pred HHHHHHh-cCCceEEEEcC-HHHHHHHHHHHHhccc
36768 Confidence 3333332 24667777664 4455677777777664
36769
36770
36771 No 287
36772 >4WWH_A ABC TRANSPORTER SOLUTE BINDING PROTEIN; ABC TRANSPORTER SOLUTE BINDING PROTEIN; HET: MSE, TRS, GAL; 1.2A {Mycobacterium smegmatis}
36773 Probab=96.38 E-value=1.8e-05 Score=81.89 Aligned_cols=210 Identities=12% Similarity=0.038 Sum_probs=113.1 Template_Neff=11.000
36774
36775 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
36776 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
36777 ....+..+||++.|..+. .++.....+++.++++.| +++.+.+...+. +...+.
36778 T Consensus 30 ~~~~~~~~Igvv~~~~~~------------~~~~~~~~g~~~~~~~~g----------~~~~~~~~~~~~----~~~~~~ 83 (362)
36779 T 4WWH_A 30 GDGDAKGTVGIAMPTKSS------------ERWVADGQNMVDQFKAFG----------YDTDLQYGDDVV----QNQVSQ 83 (362)
36780 T ss_dssp ----CCCEEEEEECCSSS------------THHHHHHHHHHHHHHHTT----------CEEEEEECTTCH----HHHHHH
36781 T ss_pred ccCCCCceEEEEcCCCCC------------HHHHHHHhHHHHHHHHhC----------CeEEEeecCccH----HHHHHH
36782 Confidence 345678999999987532 234556677777776643 233344433332 122333
36783
36784
36785 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVS-IMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
36786 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~-~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
36787 +++++. .++|++|........ ......+...++|+|..+...+.. .+..+.+..+
36788 T Consensus 84 ~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~-----~~~~~~v~~d 139 (362)
36789 T 4WWH_A 84 IENMIT-------------------KGVKLLVIAPIDGSSLTNTLQHAADLKIPVISYDRLIKGT-----PNVDYYATFD 139 (362)
36790 T ss_dssp HHHHHH-------------------TTCSEEEECCSSTTSCHHHHHHHHHTTCCEEEESSCCCSC-----SCCCEEEEEC
36791 T ss_pred HHHHHh-------------------cCCCEEEEecCChhhhHHHHHHHHHCCCCEEEeCCCCCCC-----CCCcEEEEec
36792 Confidence 443332 467877764433322 234455667899999877543310 1235566677
36793
36794
36795 Q NP_000836.2 199 DSYQAQAMVDIVTA-------LGWNYVSTLAS--EGNYGESGVEAFTQISREIGG-VCIAQSQK-------IPREPRPGE 261 (908)
36796 Q Consensus 199 ~~~~~~~~~~~l~~-------~~~~~v~ii~~--~~~~~~~~~~~~~~~~~~~~~-i~v~~~~~-------~~~~~~~~~ 261 (908)
36797 +...++.+++++.+ .+.++|+++.. +......+.++|++.+++.+. ..+..... .....+..+
36798 T Consensus 140 ~~~~g~~~~~~l~~~~~~~~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (362)
36799 T 4WWH_A 140 NTKVGVLQANYIVDTLGVADGKGPFNLELFAGSPDDNNATYFFQGAMSVLQPYIDSGKLVVKSGQTTFDQIATLRWDGGL 219 (362)
36800 T ss_dssp HHHHHHHHHHHHHHHHTGGGTCCCEEEEECBCCTTCTHHHHHHHHHHHHHHHHHHHTSEECTTCCCSHHHHBCGGGCHHH
36801 T ss_pred HHHHHHHHHHHHHHHhCCcCCCCCeEEEEEECCCCChhHHHHHHHHHHHhHhhccCCeEEEeeCccccccccccCCCHHH
36802 Confidence 77777888887754 46778998874 233455667778777765421 11211100 000011122
36803
36804
36805 Q NP_000836.2 262 FEKIIKRLLET----PNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
36806 Q Consensus 262 ~~~~~~~l~~~----~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36807 ....+++++.. .++++|++.. +..+..+++++++.|+.
36808 T Consensus 220 ~~~~~~~~l~~~~~~~~~daii~~~-~~~a~~~~~al~~~g~~ 261 (362)
36809 T 4WWH_A 220 AQSRMDNLLSQAYTSGRVDAVLSPY-DGISRGVISALKSAGYG 261 (362)
36810 T ss_dssp HHHHHHHCCCCCCSSSCCCEEECSS-HHHHHHHHHHHHHTTCS
36811 T ss_pred HHHHHHHHHHHHhcCCCccEEEeCC-hHHHHHHHHHHHHCCCC
36812 Confidence 34445555421 2567777654 34466677788777763
36813
36814
36815 No 288
36816 >3CS3_A Sugar-binding transcriptional regulator, LacI family; STRUCTURAL GENOMICS, SUGAR-BINDING TRANSCRIPTIONAL REGULATOR; HET: SO4; 2.4A {Enterococcus faecalis}
36817 Probab=96.37 E-value=1.8e-05 Score=78.05 Aligned_cols=194 Identities=11% Similarity=0.015 Sum_probs=113.5 Template_Neff=11.600
36818
36819 Q NP_000836.2 42 VDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQ 121 (908)
36820 Q Consensus 42 ~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~ 121 (908)
36821 .++..+||++.|..+. .++.....+++.++++. |+++ .+.+...+ . +
36822 T Consensus 5 ~~~~~~Ig~i~~~~~~------------~~~~~~~~g~~~~~~~~--------g~~~--~~~~~~~~--------~---~ 51 (277)
36823 T 3CS3_A 5 RRQTNIIGVYLADYGG------------SFYGELLEGIKKGLALF--------DYEM--IVCSGKKS--------H---L 51 (277)
36824 T ss_dssp CCCCCEEEEEECSSCT------------TTHHHHHHHHHHHHHTT--------TCEE--EEEESTTT--------T---T
36825 T ss_pred cCCCCEEEEEECCCCC------------chHHHHHHHHHHHHHhc--------CCEE--EEEeCCch--------h---h
36826 Confidence 3567899999986432 25566777888777764 2333 33332211 0 1
36827
36828
36829 Q NP_000836.2 122 ALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSY 201 (908)
36830 Q Consensus 122 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (908)
36831 .+.. ++++++|...... .......+...++|+|..+...+. +..+++..++..
36832 T Consensus 52 ~~~~-------------------~~~d~ii~~~~~~-~~~~~~~~~~~~ip~v~~~~~~~~-------~~~~~v~~d~~~ 104 (277)
36833 T 3CS3_A 52 FIPE-------------------KMVDGAIILDWTF-PTKEIEKFAERGHSIVVLDRTTEH-------RNIRQVLLDNRG 104 (277)
36834 T ss_dssp CCCT-------------------TTCSEEEEECTTS-CHHHHHHHHHTTCEEEESSSCCCS-------TTEEEEEECHHH
36835 T ss_pred cccc-------------------cccCEEEEeCCCC-ChHHHHHHHHCCCeEEEECCCCCc-------cCCcEEEeCcHH
36836 Confidence 1111 4678777633222 223445566789999988764431 345677777777
36837
36838
36839 Q NP_000836.2 202 QAQAMVDIVTALGWNYVSTLASEGN--YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET--PNARA 277 (908)
36840 Q Consensus 202 ~~~~~~~~l~~~~~~~v~ii~~~~~--~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~v 277 (908)
36841 .++.+++++.+.+.++++++..... ....+.+++++.+++. ++++... ... .+..+....++++++. .++++
36842 T Consensus 105 ~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--~~~~~~~~~~~~~l~~~~~~~~~ 180 (277)
36843 T 3CS3_A 105 GATQAIEQFVNVGSKKVLLLSGPEKGYDSQERLAVSTRELTRF-GIPYEII-QGD--FTEPSGYAAAKKILSQPQTEPVD 180 (277)
36844 T ss_dssp HHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHHT-TCCEEEE-ECC--SSHHHHHHHHHHHTTSCCCSSEE
36845 T ss_pred HHHHHHHHHHHCCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHc-CCCCeEE-ecC--CChHHHHHHHHHHHcCCCCCCcE
36846 Confidence 8888888886667889999885432 4566778888887764 3443211 111 1112333445555432 25677
36847
36848
36849 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
36850 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36851 |++. ++..+..+++++++.|+.
36852 T Consensus 181 i~~~-~~~~a~~~~~~l~~~g~~ 202 (277)
36853 T 3CS3_A 181 VFAF-NDEMAIGVYKYVAETNYQ 202 (277)
36854 T ss_dssp EEES-SHHHHHHHHHHHTTSSCC
36855 T ss_pred EEEe-CHHHHHHHHHHHHHCCCC
36856 Confidence 5554 455567788888877764
36857
36858
36859 No 289
36860 >2H0A_A Transcriptional regulator; Transcription, regulator, repressor, Structural Genomics; 2.8A {Thermus thermophilus}
36861 Probab=96.30 E-value=2.4e-05 Score=76.97 Aligned_cols=144 Identities=12% Similarity=0.039 Sum_probs=83.5 Template_Neff=12.000
36862
36863 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASE 224 (908)
36864 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~ 224 (908)
36865 .++|++|........ .....+...++|+|..+... +.++.+..++...++.+++++.+.+.++++++..+
36866 T Consensus 54 ~~~d~ii~~~~~~~~-~~~~~~~~~~ipvv~~~~~~---------~~~~~v~~d~~~~~~~~~~~l~~~g~~~i~~~~~~ 123 (276)
36867 T 2H0A_A 54 YLTDGLILASYDLTE-RFEEGRLPTERPVVLVDAQN---------PRYDSVYLDNRLGGRLAGAYLARFPGPIFAIAVEE 123 (276)
36868 T ss_dssp CCCSEEEEESCCCC-------CCSCSSCEEEESSCC---------TTSEEEEECSHHHHHHHHHHHTTSSSCEEEEEECC
36869 T ss_pred hcCCEEEEeccCCCh-HHHHccCCcCCCEEEECCCC---------CCCCEEEEChHHHHHHHHHHHHhCCCCEEEEEeCC
36870 Confidence 478888865433322 23344566799999876542 23456667777778888888876688889888743
36871
36872
36873 Q NP_000836.2 225 -------GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET-PNARAVIMFANEDDIRRILEAAKK 296 (908)
36874 Q Consensus 225 -------~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~viv~~~~~~~~~~~l~~~~~ 296 (908)
36875 ..+...+.+++++.+++. ++.+.....+....+..+....++++++. .++++|++.. +..+..+++++++
36876 T Consensus 124 ~~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~a~~~~~~~~~ 201 (276)
36877 T 2H0A_A 124 EPDRAFRRTVFAERMAGFQEALKEA-GRPFSPDRLYITRHSQEGGRLALRHFLEKASPPLNVFAGA-DQVALGVLEEAVR 201 (276)
36878 T ss_dssp SCCC---CCHHHHHHHHHHHHHHHT-TCCCCGGGEEEECSSHHHHHHHHHHHHTTCCSSEEEECSS-HHHHHHHHHHHHT
36879 T ss_pred CCchHhhhhHHHHHHHHHHHHHHHc-CCCCChhheEEecCChHHHHHHHHHHHHhcCCCCEEEECC-HHHHHHHHHHHHH
36880 Confidence 234556778888888765 34432211111001112233444555421 2477776653 4456678888888
36881
36882
36883 Q NP_000836.2 297 LNQS 300 (908)
36884 Q Consensus 297 ~g~~ 300 (908)
36885 .|+.
36886 T Consensus 202 ~g~~ 205 (276)
36887 T 2H0A_A 202 LGLT 205 (276)
36888 T ss_dssp TSCT
36889 T ss_pred CCCC
36890 Confidence 7764
36891
36892
36893 No 290
36894 >3E61_B Putative transcriptional repressor of ribose; STRUCTURAL GENOMICS, TRANSCRIPTION, DNA-binding, Transcription; HET: GOL; 2.0A {Staphylococcus saprophyticus subsp. saprophyticus}
36895 Probab=96.28 E-value=2.5e-05 Score=77.04 Aligned_cols=197 Identities=11% Similarity=0.029 Sum_probs=106.2 Template_Neff=11.300
36896
36897 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
36898 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
36899 ...++.+||++.|..+. .+......+++.++++.+ + ++.+.+...+. ....+.+
36900 T Consensus 4 ~~~~~~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~~ 57 (277)
36901 T 3E61_B 4 YKRKSKLIGLLLPDMSN------------PFFTLIARGVEDVALAHG--------Y--QVLIGNSDNDI----KKAQGYL 57 (277)
36902 T ss_dssp ------CEEEEESCTTS------------HHHHHHHHHHHHHHHHTT--------C--CEEEEECTTCH----HHHHHHH
36903 T ss_pred CCCCCCEEEEEeCCCCC------------HHHHHHHHHHHHHHHHCC--------C--eEEEEeCCCCH----HHHHHHH
36904 Confidence 34567899999986432 245567777777776642 2 33344433321 2223344
36905
36906
36907 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
36908 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
36909 ++++. .++|++|....+.. .....+...++|+|..+...+ ....+..++.
36910 T Consensus 58 ~~l~~-------------------~~~d~ii~~~~~~~--~~~~~~~~~~ipvv~~~~~~~---------~~~~v~~d~~ 107 (277)
36911 T 3E61_B 58 ATFVS-------------------HNCTGMISTAFNEN--IIENTLTDHHIPFVFIDRINN---------EHNGISTNHF 107 (277)
36912 T ss_dssp HHHHH-------------------TTCSEEEECGGGHH--HHHHHHHHTTCCEEECC---------------CBCCCCHH
36913 T ss_pred HHHHH-------------------cCCCEEEEeCCCch--HHHHHHHHCCCCEEEECCCCC---------CCCEEEeChH
36914 Confidence 43332 47888876543322 223455678999998775432 2345666667
36915
36916
36917 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
36918 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
36919 ..++.+++++.+.+.++++++.... .....+.+++++.+++. ++.+.... .. .........+.+. ..++++|
36920 T Consensus 108 ~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~~~-~~---~~~~~~~~~~~l~-~~~~~ai 181 (277)
36921 T 3E61_B 108 KGGQLQAEVVRKGKGKNVLIVHENLLIDAFHQRVQGIKYILDQQ-RIDYKMLE-AT---LLDNDKKFIDLIK-ELSIDSI 181 (277)
36922 T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCTTSHHHHHHHHHHHHHHHHT-TCEEEEEE-GG---GGSSHHHHHHHHH-HTTCCEE
36923 T ss_pred HHHHHHHHHHHcCCCCeEEEEeCCCCChHHHHHHHHHHHHHHHC-CCChHHHh-hh---cccchHHHHHHHh-hCCCCEE
36924 Confidence 7777788887665667888887532 34556777888777764 34332111 11 0111222222232 2467888
36925
36926
36927 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
36928 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36929 ++.. +..+..+++++++.|..
36930 T Consensus 182 ~~~~-d~~a~~~~~al~~~g~~ 202 (277)
36931 T 3E61_B 182 ICSN-DLLAINVLGIVQRYHFK 202 (277)
36932 T ss_dssp EESS-HHHHHHHHHHHHHTTCC
36933 T ss_pred EECC-HHHHHHHHHHHHHcCCC
36934 Confidence 7764 44566777888777763
36935
36936
36937 No 291
36938 >3E61_A Putative transcriptional repressor of ribose; STRUCTURAL GENOMICS, TRANSCRIPTION, DNA-binding, Transcription; HET: GOL; 2.0A {Staphylococcus saprophyticus subsp. saprophyticus}
36939 Probab=96.28 E-value=2.5e-05 Score=77.04 Aligned_cols=197 Identities=11% Similarity=0.029 Sum_probs=101.8 Template_Neff=11.300
36940
36941 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
36942 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
36943 ...++.+||++.|..+. .+......+++.++++.+ + ++.+.+...+. ....+.+
36944 T Consensus 4 ~~~~~~~Ig~i~~~~~~------------~~~~~~~~~~~~~~~~~g--------~--~~~~~~~~~~~----~~~~~~~ 57 (277)
36945 T 3E61_A 4 YKRKSKLIGLLLPDMSN------------PFFTLIARGVEDVALAHG--------Y--QVLIGNSDNDI----KKAQGYL 57 (277)
36946 T ss_dssp ------CEEEEESCTTS------------HHHHHHHHHHHHHHHHTT--------C--CEEEEECTTCH----HHHHHHH
36947 T ss_pred CCCCCCEEEEEeCCCCC------------HHHHHHHHHHHHHHHHCC--------C--eEEEEeCCCCH----HHHHHHH
36948 Confidence 34567899999986432 245567777777776642 2 33344433321 2223344
36949
36950
36951 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
36952 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
36953 ++++. .++|++|....+.. .....+...++|+|..+...+ ....+..++.
36954 T Consensus 58 ~~l~~-------------------~~~d~ii~~~~~~~--~~~~~~~~~~ipvv~~~~~~~---------~~~~v~~d~~ 107 (277)
36955 T 3E61_A 58 ATFVS-------------------HNCTGMISTAFNEN--IIENTLTDHHIPFVFIDRINN---------EHNGISTNHF 107 (277)
36956 T ss_dssp HHHHH-------------------TTCSEEEECGGGHH--HHHHHHHHC-CCEEEGGGCC------------------HH
36957 T ss_pred HHHHH-------------------cCCCEEEEeCCCch--HHHHHHHHCCCCEEEECCCCC---------CCCEEEeChH
36958 Confidence 43332 47888876543322 223455678999998775432 2345666667
36959
36960
36961 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
36962 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
36963 ..++.+++++.+.+.++++++.... .....+.+++++.+++. ++.+.... .. .........+.+. ..++++|
36964 T Consensus 108 ~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~~~-~~---~~~~~~~~~~~l~-~~~~~ai 181 (277)
36965 T 3E61_A 108 KGGQLQAEVVRKGKGKNVLIVHENLLIDAFHQRVQGIKYILDQQ-RIDYKMLE-AT---LLDNDKKFIDLIK-ELSIDSI 181 (277)
36966 T ss_dssp HHHHHHHHHHHHTTCCSEEEEESCTTSHHHHHHHHHHHHHHHC----CEEEEE-GG---GGGSHHHHHHHHH-HHTCCEE
36967 T ss_pred HHHHHHHHHHHcCCCCeEEEEeCCCCChHHHHHHHHHHHHHHHC-CCChHHHh-hh---cccchHHHHHHHh-hCCCCEE
36968 Confidence 7777788887665667888887532 34556777888777764 34332111 11 0111222222232 2467888
36969
36970
36971 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLNQS 300 (908)
36972 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g~~ 300 (908)
36973 ++.. +..+..+++++++.|..
36974 T Consensus 182 ~~~~-d~~a~~~~~al~~~g~~ 202 (277)
36975 T 3E61_A 182 ICSN-DLLAINVLGIVQRYHFK 202 (277)
36976 T ss_dssp EESS-HHHHHHHHHHHHHTTCC
36977 T ss_pred EECC-HHHHHHHHHHHHHcCCC
36978 Confidence 7764 44566777888777763
36979
36980
36981 No 292
36982 >6HNI_A ABC-type transport system, sugar-family extracellular; Substrate binding protein, adhesin, tyrosine; HET: TYR, EDO; 1.35A {Peptoclostridium difficile 630}
36983 Probab=96.19 E-value=3.4e-05 Score=77.89 Aligned_cols=218 Identities=9% Similarity=0.062 Sum_probs=114.9 Template_Neff=11.800
36984
36985 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
36986 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
36987 .....+.++||++.|.++ .++.....+++.++++.+.. .|+++++.+.|...+. ....+
36988 T Consensus 17 ~~~~~~~~~Igvv~~~~~-------------~~~~~~~~g~~~~~~~~g~~----~g~~i~~~~~~~~~~~----~~~~~ 75 (319)
36989 T 6HNI_A 17 NSKDKEVKKIGITQLVEH-------------PALDATRTGFVKALEKNGFK----DGENIDIDFQNAQNDM----PTTQS 75 (319)
36990 T ss_pred HhhcCCceEEEEEecCCC-------------HHHHHHHHHHHHHHHHhCCC----CCceEEEEEECCCCCH----HHHHH
36991 Confidence 345667899999998653 24556777777777664321 1345666666654332 22233
36992
36993
36994 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDN---TRYDFFSRV 195 (908)
36995 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~---~~~~~~~~~ 195 (908)
36996 .++++.. .++|++|+...... ..... ...++|+|..+...+..... ...++.+.+
36997 T Consensus 76 ~~~~~~~-------------------~~~d~ii~~~~~~~-~~~~~--~~~~ipvv~~~~~~~~~~~~~~~~~~~~~~~~ 133 (319)
36998 T 6HNI_A 76 IASKFAS-------------------DKKDLIFAISTPSA-QAAFN--ATKDIPILITAVSDPVAAGLVKTLEKPGTNVS 133 (319)
36999 T ss_pred HHHHHHH-------------------CCCCEEEEeCCchH-HHHHH--HHcCCCEEEEcCCCCCccccccCCCCCCcCee
37000 Confidence 3333322 47888876443322 22222 25799998876544321100 001122444
37001
37002
37003 Q NP_000836.2 196 VPPDSYQAQAMVDIVTAL--GWNYVSTLASEGNYG-ESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
37004 Q Consensus 196 ~~~~~~~~~~~~~~l~~~--~~~~v~ii~~~~~~~-~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
37005 ..+....++.+++++.+. +.++++++..+...+ ..+.+++++.+++. ++++..... .+..+....++++.
37006 T Consensus 134 ~~~~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~i~~~~-- 206 (319)
37007 T 6HNI_A 134 GTSDFVSVDKGLELLKIFAPKAKTIGVMYNTSEVNSKVQVDALKEYASKN-GFKVVEKGI----TTSNEVNQGISSLV-- 206 (319)
37008 T ss_pred ecCHHHHHHHHHHHHHHHCCCCcEEEEEeCCCChHHHHHHHHHHHHHHcC-CCEEeeeeC----CCHHHHHHHHHHhC--
37009 Confidence 455555566677777554 788999998544332 34566777776654 344432111 11122334444442
37010
37011
37012 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIG 307 (908)
37013 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~ 307 (908)
37014 .++++|++.. +..+..+++++++.+...++.+++
37015 T Consensus 207 ~~~~~i~~~~-~~~a~~~~~~~~~~~~~~~v~v~~ 240 (319)
37016 T 6HNI_A 207 GKIDVLYVPT-DNLVASSMPIVSKIATENKIPVIA 240 (319)
37017 T ss_pred CCCCEEEECC-hHHHHHHHHHHHHCCCCCCceEEE
37018 Confidence 3678887664 334556666776665532333443
37019
37020
37021 No 293
37022 >6HNJ_A ABC-type transport system, sugar-family extracellular; Substrate binding protein, adhesin, tyrosine; HET: PGE, EDO; 1.8A {Peptoclostridium difficile 630}
37023 Probab=96.19 E-value=3.4e-05 Score=77.89 Aligned_cols=218 Identities=9% Similarity=0.062 Sum_probs=114.9 Template_Neff=11.800
37024
37025 Q NP_000836.2 39 SIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLT 118 (908)
37026 Q Consensus 39 ~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~ 118 (908)
37027 .....+.++||++.|.++ .++.....+++.++++.+.. .|+++++.+.|...+. ....+
37028 T Consensus 17 ~~~~~~~~~Igvv~~~~~-------------~~~~~~~~g~~~~~~~~g~~----~g~~i~~~~~~~~~~~----~~~~~ 75 (319)
37029 T 6HNJ_A 17 NSKDKEVKKIGITQLVEH-------------PALDATRTGFVKALEKNGFK----DGENIDIDFQNAQNDM----PTTQS 75 (319)
37030 T ss_pred HhhcCCceEEEEEecCCC-------------HHHHHHHHHHHHHHHHhCCC----CCceEEEEEECCCCCH----HHHHH
37031 Confidence 345667899999998653 24556777777777664321 1345666666654332 22233
37032
37033
37034 Q NP_000836.2 119 FVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDN---TRYDFFSRV 195 (908)
37035 Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~---~~~~~~~~~ 195 (908)
37036 .++++.. .++|++|+...... ..... ...++|+|..+...+..... ...++.+.+
37037 T Consensus 76 ~~~~~~~-------------------~~~d~ii~~~~~~~-~~~~~--~~~~ipvv~~~~~~~~~~~~~~~~~~~~~~~~ 133 (319)
37038 T 6HNJ_A 76 IASKFAS-------------------DKKDLIFAISTPSA-QAAFN--ATKDIPILITAVSDPVAAGLVKTLEKPGTNVS 133 (319)
37039 T ss_pred HHHHHHH-------------------CCCCEEEEeCCchH-HHHHH--HHcCCCEEEEcCCCCCccccccCCCCCCcCee
37040 Confidence 3333322 47888876443322 22222 25799998876544321100 001122444
37041
37042
37043 Q NP_000836.2 196 VPPDSYQAQAMVDIVTAL--GWNYVSTLASEGNYG-ESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET 272 (908)
37044 Q Consensus 196 ~~~~~~~~~~~~~~l~~~--~~~~v~ii~~~~~~~-~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (908)
37045 ..+....++.+++++.+. +.++++++..+...+ ..+.+++++.+++. ++++..... .+..+....++++.
37046 T Consensus 134 ~~~~~~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~i~~~~-- 206 (319)
37047 T 6HNJ_A 134 GTSDFVSVDKGLELLKIFAPKAKTIGVMYNTSEVNSKVQVDALKEYASKN-GFKVVEKGI----TTSNEVNQGISSLV-- 206 (319)
37048 T ss_pred ecCHHHHHHHHHHHHHHHCCCCcEEEEEeCCCChHHHHHHHHHHHHHHcC-CCEEeeeeC----CCHHHHHHHHHHhC--
37049 Confidence 455555566677777554 788999998544332 34566777776654 344432111 11122334444442
37050
37051
37052 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIG 307 (908)
37053 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g~~~~~~~i~ 307 (908)
37054 .++++|++.. +..+..+++++++.+...++.+++
37055 T Consensus 207 ~~~~~i~~~~-~~~a~~~~~~~~~~~~~~~v~v~~ 240 (319)
37056 T 6HNJ_A 207 GKIDVLYVPT-DNLVASSMPIVSKIATENKIPVIA 240 (319)
37057 T ss_pred CCCCEEEECC-hHHHHHHHHHHHHCCCCCCceEEE
37058 Confidence 3678887664 334556666776665532333443
37059
37060
37061 No 294
37062 >3H75_A Periplasmic sugar-binding domain protein; Protein Structure Initiative II (PSI; HET: SO4; 1.6A {Pseudomonas fluorescens Pf-5}
37063 Probab=96.16 E-value=3.8e-05 Score=78.89 Aligned_cols=212 Identities=15% Similarity=0.069 Sum_probs=109.7 Template_Neff=10.900
37064
37065 Q NP_000836.2 44 GDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQAL 123 (908)
37066 Q Consensus 44 ~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l 123 (908)
37067 ..++||++.|.... ..+...+..+++.++++.+ + ++.+.+...++ ....+.++++
37068 T Consensus 2 ~~~~I~~i~~~~~~-----------~~~~~~~~~g~~~~a~~~g--------~--~~~~~~~~~~~----~~~~~~~~~l 56 (350)
37069 T 3H75_A 2 SLTSVVFLNPGNST-----------ETFWVSYSQFMQAAARDLG--------L--DLRILYAERDP----QNTLQQAREL 56 (350)
37070 T ss_dssp -CCEEEEEECSCTT-----------CHHHHHHHHHHHHHHHHHT--------C--EEEEEECTTCH----HHHHHHHHHH
37071 T ss_pred CCeEEEEEcCCCCC-----------CHHHHHHHHHHHHHHHHhC--------C--EEEEEEcCCCH----HHHHHHHHHH
37072 Confidence 46789999986211 1245667777777777642 2 33444443332 1222333333
37073
37074
37075 Q NP_000836.2 124 IEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSD-------NTRYDFFSRVV 196 (908)
37076 Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~-------~~~~~~~~~~~ 196 (908)
37077 +.. ..++|++|..............+...+||+|..+...+.... ....+++..+.
37078 T Consensus 57 ~~~-----------------~~~~d~ii~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 119 (350)
37079 T 3H75_A 57 FQG-----------------RDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSPLTLDQRELIGQSRQNYSDWIGSMV 119 (350)
37080 T ss_dssp HHS-----------------SSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESCCCTTTC------------CEEEEE
37081 T ss_pred HcC-----------------CCCCCEEEEeCCcccHHHHHHHHHhcCCeEEEECCCCCHHHHHHhcCcchhcccchhEee
37082 Confidence 210 046788776543322223445566789999987754332100 00012345666
37083
37084
37085 Q NP_000836.2 197 PPDSYQAQAMVDIVTA-LGWN------YVSTLAS--EGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIK 267 (908)
37086 Q Consensus 197 ~~~~~~~~~~~~~l~~-~~~~------~v~ii~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~ 267 (908)
37087 .++...+..+++++.+ .+.+ +++++.. +......+.++|++.+++.+...+.... .. ..+..+....++
37088 T Consensus 120 ~d~~~~g~~~~~~l~~~~g~~~~~~~~~i~~i~~~~~~~~~~~r~~g~~~~l~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 197 (350)
37089 T 3H75_A 120 GDDEEAGYRMLKELLHKLGPVPAGHGIELLAFSGLKVTPAAQLRERGLRRALAEHPQVHLRQLV-YG-EWNRERAYRQAQ 197 (350)
37090 T ss_dssp CCHHHHHHHHHHHHHHHHCCCCSSCCEEEEEEESCTTSHHHHHHHHHHHHHHHHCTTEEEEEEE-EC-TTCHHHHHHHHH
37091 T ss_pred CCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEE-eC-CCCHHHHHHHHH
37092 Confidence 6777777777777643 4432 6777764 2334556778888887764312221111 11 011122334445
37093
37094
37095 Q NP_000836.2 268 RLLE-TPNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
37096 Q Consensus 268 ~l~~-~~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
37097 ++++ ..++++|++.. +..+..+++++++.|+.
37098 T Consensus 198 ~~l~~~~~~~~i~~~~-d~~a~~~~~al~~~g~~ 230 (350)
37099 T 3H75_A 198 QLLKRYPKTQLVWSAN-DEMALGAMQAARELGRK 230 (350)
37100 T ss_dssp HHHHHCTTEEEEEESS-HHHHHHHHHHHHHTTCC
37101 T ss_pred HHHHHCCCCcEEEECC-HHHHHHHHHHHHHcCCC
37102 Confidence 5542 12466666553 44566778888887764
37103
37104
37105 No 295
37106 >4RKQ_A Transcriptional regulator, LacI family; sugar binding, transcription regulation, Enzyme; HET: EDO; 1.903A {Arthrobacter sp.}
37107 Probab=96.09 E-value=4.6e-05 Score=75.83 Aligned_cols=199 Identities=12% Similarity=0.049 Sum_probs=110.8 Template_Neff=11.600
37108
37109 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
37110 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
37111 ...++..+||++.|..+. .+...+..+++.++++.+ + ++.+.+...++. ...+.
37112 T Consensus 10 l~~~~~~~I~~i~~~~~~------------~~~~~~~~~~~~~~~~~g--------~--~~~~~~~~~~~~----~~~~~ 63 (294)
37113 T 4RKQ_A 10 LVQGARTSVGLAIPDLTN------------PYFPAFASSVVELATLRG--------W--HVVVDDYGHGGR----SGLDA 63 (294)
37114 T ss_dssp SCCSCCCEEEEEESCSSS------------THHHHHHHHHHHHHHHTT--------C--EEEEEECCSTTC----CHHHH
37115 T ss_pred HccCCCCeEEEEeCCCCC------------ccHHHHHHHHHHHHHHcC--------C--eEEEEeCCCChh----hHHHH
37116 Confidence 345678999999986432 245566777777766542 2 334444333221 22223
37117
37118
37119 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
37120 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
37121 ++.+ . +++|++|....+... .... . ..++|+|..+...+ +..+.+..+.
37122 T Consensus 64 ~~~~-~-------------------~~~d~ii~~~~~~~~-~~~~-~-~~~ipvv~~~~~~~--------~~~~~v~~d~ 112 (294)
37123 T 4RKQ_A 64 VEHL-A-------------------PQVDAVIGYLGGYAD-QAQT-V-LGRRPLIVLDENPG--------GAAGSINFDY 112 (294)
37124 T ss_dssp HHHH-G-------------------GGCSEEEECCTTCHH-HHHH-H-HTTSCEEEESSCCT--------TCSEEEEECH
37125 T ss_pred HHHH-h-------------------hcCCEEEEeCCCchh-HHHH-H-hcCCCEEEECCCCC--------CCCCEEEeCH
37126 Confidence 3322 1 467887764333221 1111 2 46899988765332 2455667777
37127
37128
37129 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGN-------YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE- 271 (908)
37130 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~-------~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~- 271 (908)
37131 ...++.+++++.+.+.++++++..+.. +...+.+++.+.+++. ++.+... ... .+..+....+++++.
37132 T Consensus 113 ~~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--~~~~~~~~~~~~~l~~ 188 (294)
37133 T 4RKQ_A 113 QHAAKVAVAQLMDSKRQHIAYLEAGSASESDEPVPCTVRGKAVAGRLDEL-GASWSLI-VAE--ETAEAAREAAAAFLRE 188 (294)
37134 T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEESCCTTSSSCCCCSHHHHHHHHHHHHT-TCCEEEE-EEC--SSHHHHHHHHHHHHHH
37135 T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcchHHHHHHHHHHHHh-CCCceEE-ecC--ccHHHHHHHHHHHHHH
37136 Confidence 777888888876667889999885332 3456667777777765 3433211 111 111223344444442
37137
37138
37139 Q NP_000836.2 272 TPNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
37140 Q Consensus 272 ~~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
37141 ..++++|++.. +..+..+++++++.|+.
37142 T Consensus 189 ~~~~~~i~~~~-~~~a~~~~~al~~~g~~ 216 (294)
37143 T 4RKQ_A 189 HPETDGILAFN-DLMAAGVLKALSGSGRR 216 (294)
37144 T ss_dssp CTTCCEEEESS-HHHHHHHHHHHHHTTCC
37145 T ss_pred CCCCcEEEECC-HHHHHHHHHHHHHCCCC
37146 Confidence 12467776653 44566778888887764
37147
37148
37149 No 296
37150 >4RKQ_B Transcriptional regulator, LacI family; sugar binding, transcription regulation, Enzyme; HET: EDO; 1.903A {Arthrobacter sp.}
37151 Probab=96.09 E-value=4.6e-05 Score=75.83 Aligned_cols=199 Identities=12% Similarity=0.049 Sum_probs=108.6 Template_Neff=11.600
37152
37153 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
37154 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
37155 ...++..+||++.|..+. .+...+..+++.++++.+ + ++.+.+...++. ...+.
37156 T Consensus 10 l~~~~~~~I~~i~~~~~~------------~~~~~~~~~~~~~~~~~g--------~--~~~~~~~~~~~~----~~~~~ 63 (294)
37157 T 4RKQ_B 10 LVQGARTSVGLAIPDLTN------------PYFPAFASSVVELATLRG--------W--HVVVDDYGHGGR----SGLDA 63 (294)
37158 T ss_dssp ----CCCEEEEEESCSSS------------THHHHHHHHHHHHHHHTT--------C--EEEEEECCSTTC----CHHHH
37159 T ss_pred HccCCCCeEEEEeCCCCC------------ccHHHHHHHHHHHHHHcC--------C--eEEEEeCCCChh----hHHHH
37160 Confidence 345678999999986432 245566777777766542 2 334444333221 22223
37161
37162
37163 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
37164 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
37165 ++.+ . +++|++|....+... .... . ..++|+|..+...+ +..+.+..+.
37166 T Consensus 64 ~~~~-~-------------------~~~d~ii~~~~~~~~-~~~~-~-~~~ipvv~~~~~~~--------~~~~~v~~d~ 112 (294)
37167 T 4RKQ_B 64 VEHL-A-------------------PQVDAVIGYLGGYAD-QAQT-V-LGRRPLIVLDENPG--------GAAGSINFDY 112 (294)
37168 T ss_dssp HHHH-G-------------------GGCSEEEECCSSCHH-HHHH-H-HTTSCEEEESSCCT--------TCSEEEEECH
37169 T ss_pred HHHH-h-------------------hcCCEEEEeCCCchh-HHHH-H-hcCCCEEEECCCCC--------CCCCEEEeCH
37170 Confidence 3322 1 467887764333221 1111 2 46899988765332 2455667777
37171
37172
37173 Q NP_000836.2 200 SYQAQAMVDIVTALGWNYVSTLASEGN-------YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE- 271 (908)
37174 Q Consensus 200 ~~~~~~~~~~l~~~~~~~v~ii~~~~~-------~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~- 271 (908)
37175 ...++.+++++.+.+.++++++..+.. +...+.+++.+.+++. ++.+... ... .+..+....+++++.
37176 T Consensus 113 ~~~~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--~~~~~~~~~~~~~l~~ 188 (294)
37177 T 4RKQ_B 113 QHAAKVAVAQLMDSKRQHIAYLEAGSASESDEPVPCTVRGKAVAGRLDEL-GASWSLI-VAE--ETAEAAREAAAAFLRE 188 (294)
37178 T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEECC------CCCCSHHHHHHHHHHHHH-TCCEEEE-EEC--SSHHHHHHHHHHHHHH
37179 T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCCCCCCCCCCcchHHHHHHHHHHHHh-CCCceEE-ecC--ccHHHHHHHHHHHHHH
37180 Confidence 777888888876667889999885332 3456667777777765 3433211 111 111223344444442
37181
37182
37183 Q NP_000836.2 272 TPNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
37184 Q Consensus 272 ~~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
37185 ..++++|++.. +..+..+++++++.|+.
37186 T Consensus 189 ~~~~~~i~~~~-~~~a~~~~~al~~~g~~ 216 (294)
37187 T 4RKQ_B 189 HPETDGILAFN-DLMAAGVLKALSGSGRR 216 (294)
37188 T ss_dssp CTTCCEEEESS-HHHHHHHHHHHHHHTCC
37189 T ss_pred CCCCcEEEECC-HHHHHHHHHHHHHCCCC
37190 Confidence 12467776653 44566778888887764
37191
37192
37193 No 297
37194 >3LFT_A uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI; HET: TRP; 1.35A {Streptococcus pneumoniae}
37195 Probab=96.03 E-value=5.4e-05 Score=75.11 Aligned_cols=202 Identities=15% Similarity=0.156 Sum_probs=105.7 Template_Neff=12.200
37196
37197 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
37198 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
37199 ..+||++.|.+. .++....++++.++++.+.. |.++++.+.|+..++. ...+.++++.
37200 T Consensus 2 ~~~I~~i~~~~~-------------~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~d~~~~~~----~~~~~~~~~~ 59 (295)
37201 T 3LFT_A 2 NAKIGVLQFVSH-------------PSLDLIYKGIQDGLAEEGYK-----DDQVKIDFMNSEGDQS----KVATMSKQLV 59 (295)
37202 T ss_dssp CEEEEEEECSCC-------------HHHHHHHHHHHHHHHHTTCC-----GGGEEEEEEECTTCHH----HHHHHHHHHT
37203 T ss_pred CcEEEEEEccCC-------------HHHHHHHHHHHHHHHHcCCc-----cCeEEEEEECCCCCHH----HHHHHHHHHH
37204 Confidence 568999988742 25567788888888876422 2346666666543322 2223333332
37205
37206
37207 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDN---TRYDFFSRVVPPDSY 201 (908)
37208 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~---~~~~~~~~~~~~~~~ 201 (908)
37209 . .++|++|+.... ....+.. + ..++|+|..+...+..... ...+..+.+..+...
37210 T Consensus 60 ~-------------------~~~d~ii~~~~~-~~~~~~~-~-~~~ipvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (295)
37211 T 3LFT_A 60 A-------------------NGNDLVVGIATP-AAQGLAS-A-TKDLPVIMAAITDPIGANLVKDLKKPGGNVTGVSDHN 117 (295)
37212 T ss_dssp T-------------------SSCSEEEEESHH-HHHHHHH-H-CSSSCEEEESCSCTTTTTSCSCSSCCCSSEEEEEECC
37213 T ss_pred H-------------------CCCCEEEEeCCH-HHHHHHH-h-cCCCCEEEEEcCChhhcchhhhccCCCCCcceecCCC
37214 Confidence 2 478888864332 2222222 2 5799998876544321100 000111223333334
37215
37216
37217 Q NP_000836.2 202 QAQAMVDIVTAL--GWNYVSTLASEGNYG-ESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
37218 Q Consensus 202 ~~~~~~~~l~~~--~~~~v~ii~~~~~~~-~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
37219 .++.+++++.+. +.+++++++.+..++ ..+.+++++.+++. ++++.... .. +..+....++++. .++++|
37220 T Consensus 118 ~~~~~~~~l~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~---~~~~~~~~~~~~~--~~~~~i 190 (295)
37221 T 3LFT_A 118 PAQQQVELIKALTPNVKTIGALYSSSEDNSKTQVEEFKAYAEKA-GLTVETFA-VP---STNEIASTVTVMT--SKVDAI 190 (295)
37222 T ss_dssp CHHHHHHHHHHHCTTCCEEEEEEETTCHHHHHHHHHHHHHHHHT-TCEEEEEE-ES---SGGGHHHHHHHHT--TTCSEE
37223 T ss_pred cHHHHHHHHHHHCCCCcEEEEeecCCCCChHHHHHHHHHHHHHc-CCEEEEEE-eC---CHHHHHHHHHHhc--cCCCEE
37224 Confidence 455666666554 678899998654433 45667777777664 34443211 11 1123444444442 367777
37225
37226
37227 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLN 298 (908)
37228 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g 298 (908)
37229 ++.. +..+..+++++.+.+
37230 T Consensus 191 ~~~~-~~~~~~~~~~~~~~~ 209 (295)
37231 T 3LFT_A 191 WVPI-DNTIASGFPTVVSSN 209 (295)
37232 T ss_dssp EECS-CHHHHHTHHHHHHHT
37233 T ss_pred EECC-ChhhhcchhHHHHHH
37234 Confidence 6654 333444555555544
37235
37236
37237 No 298
37238 >3LFT_B uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI; HET: MSE, TRP; 1.35A {Streptococcus pneumoniae}
37239 Probab=96.03 E-value=5.4e-05 Score=75.11 Aligned_cols=202 Identities=15% Similarity=0.156 Sum_probs=103.1 Template_Neff=12.200
37240
37241 Q NP_000836.2 45 DIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQALI 124 (908)
37242 Q Consensus 45 ~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~l~ 124 (908)
37243 ..+||++.|.+. .++....++++.++++.+.. |.++++.+.|+..++. ...+.++++.
37244 T Consensus 2 ~~~I~~i~~~~~-------------~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~d~~~~~~----~~~~~~~~~~ 59 (295)
37245 T 3LFT_B 2 NAKIGVLQFVSH-------------PSLDLIYKGIQDGLAEEGYK-----DDQVKIDFMNSEGDQS----KVATMSKQLV 59 (295)
37246 T ss_dssp --CEEEEECSCC-------------HHHHHHHHHHHHHHHHTTC---------CCEEEEECTTCHH----HHHHHHHHHH
37247 T ss_pred CcEEEEEEccCC-------------HHHHHHHHHHHHHHHHcCCc-----cCeEEEEEECCCCCHH----HHHHHHHHHH
37248 Confidence 568999988742 25567788888888876422 2346666666543322 2223333332
37249
37250
37251 Q NP_000836.2 125 EKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDN---TRYDFFSRVVPPDSY 201 (908)
37252 Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~---~~~~~~~~~~~~~~~ 201 (908)
37253 . .++|++|+.... ....+.. + ..++|+|..+...+..... ...+..+.+..+...
37254 T Consensus 60 ~-------------------~~~d~ii~~~~~-~~~~~~~-~-~~~ipvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (295)
37255 T 3LFT_B 60 A-------------------NGNDLVVGIATP-AAQGLAS-A-TKDLPVIMAAITDPIGANLVKDLKKPGGNVTGVSDHN 117 (295)
37256 T ss_dssp H-------------------SSCSEEEEESHH-HHHHHHH-H-CSSSCEEEESCSCTTTTTSCSCSSCCCSSEEEEEECC
37257 T ss_pred H-------------------CCCCEEEEeCCH-HHHHHHH-h-cCCCCEEEEEcCChhhcchhhhccCCCCCcceecCCC
37258 Confidence 2 478888864332 2222222 2 5799998876544321100 000111223333334
37259
37260
37261 Q NP_000836.2 202 QAQAMVDIVTAL--GWNYVSTLASEGNYG-ESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAV 278 (908)
37262 Q Consensus 202 ~~~~~~~~l~~~--~~~~v~ii~~~~~~~-~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi 278 (908)
37263 .++.+++++.+. +.+++++++.+..++ ..+.+++++.+++. ++++.... .. +..+....++++. .++++|
37264 T Consensus 118 ~~~~~~~~l~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~---~~~~~~~~~~~~~--~~~~~i 190 (295)
37265 T 3LFT_B 118 PAQQQVELIKALTPNVKTIGALYSSSEDNSKTQVEEFKAYAEKA-GLTVETFA-VP---STNEIASTVTVMT--SKVDAI 190 (295)
37266 T ss_dssp CHHHHHHHHHHHCTTCCEEEEEEETTCHHHHHHHHHHHHHHHHT-TCEEEEEE-ES---SGGGHHHHHHHHH--TTCSEE
37267 T ss_pred cHHHHHHHHHHHCCCCcEEEEeecCCCCChHHHHHHHHHHHHHc-CCEEEEEE-eC---CHHHHHHHHHHhc--cCCCEE
37268 Confidence 455666666554 678899998654433 45667777777664 34443211 11 1123444444442 367777
37269
37270
37271 Q NP_000836.2 279 IMFANEDDIRRILEAAKKLN 298 (908)
37272 Q Consensus 279 v~~~~~~~~~~~l~~~~~~g 298 (908)
37273 ++.. +..+..+++++.+.+
37274 T Consensus 191 ~~~~-~~~~~~~~~~~~~~~ 209 (295)
37275 T 3LFT_B 191 WVPI-DNTIASGFPTVVSSN 209 (295)
37276 T ss_dssp EECS-CHHHHHTHHHHHHHT
37277 T ss_pred EECC-ChhhhcchhHHHHHH
37278 Confidence 6654 333444555555544
37279
37280
37281 No 299
37282 >3HS3_B Ribose operon repressor; PSI-II, NYSGXRC, 11235h, periplasmic binding; 1.6A {Lactobacillus acidophilus}
37283 Probab=95.74 E-value=0.00012 Score=71.98 Aligned_cols=195 Identities=13% Similarity=0.113 Sum_probs=106.9 Template_Neff=11.500
37284
37285 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
37286 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
37287 ...+..+||++.|..+. .+......+++.++++. |+++.+...+. .++ ....+.+
37288 T Consensus 6 ~~~~~~~Ig~v~~~~~~------------~~~~~~~~g~~~~~~~~--------g~~~~~~~~~~-~~~----~~~~~~i 60 (277)
37289 T 3HS3_B 6 YQKKSKMIGIIIPDLNN------------RFYAQIIDGIQEVIQKE--------GYTALISFSTN-SDV----KKYQNAI 60 (277)
37290 T ss_dssp --CCCCEEEEEESCSCS------------HHHHHHHHHHHHHHHHT--------TCEEEEEECSS-CCH----HHHHHHH
37291 T ss_pred ccCCCCeEEEEeCCCCC------------hhHHHHHHHHHHHHHHc--------CCEEEEEecCC-CcH----HHHHHHH
37292 Confidence 34567899999986432 24556777777777664 23343332221 221 1222334
37293
37294
37295 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDS 200 (908)
37296 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (908)
37297 ++++. .++|++|....+... ....++|+|..+...+. +....+..+..
37298 T Consensus 61 ~~l~~-------------------~~~d~ii~~~~~~~~------~~~~~ipvv~~~~~~~~-------~~~~~v~~d~~ 108 (277)
37299 T 3HS3_B 61 INFEN-------------------NNVDGIITSAFTIPP------NFHLNTPLVMYDSANIN-------DDIVRIVSNNT 108 (277)
37300 T ss_dssp HHHHH-------------------TTCSEEEEECCCCCT------TCCCSSCEEEESCCCCC-------SSSEEEEECHH
37301 T ss_pred HHHHH-------------------CCCCEEEEeCCCCCc------ccccCCCEEEecCCCCC-------CCceEEEeccH
37302 Confidence 43332 478888865433221 13569999987764321 23455666777
37303
37304
37305 Q NP_000836.2 201 YQAQAMVDIVTALGWNYVSTLASE--GNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLE-TPNARA 277 (908)
37306 Q Consensus 201 ~~~~~~~~~l~~~~~~~v~ii~~~--~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v 277 (908)
37307 ..++.+++++.+. .++++++... ......+.++|++.+++. ++.+.... .. .......+.++++ ..++++
37308 T Consensus 109 ~~~~~~~~~l~~~-~~~i~~i~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~-~~----~~~~~~~~~~~l~~~~~~~~ 181 (277)
37309 T 3HS3_B 109 KGGKESIKLLSKK-IEKVLIQHWPLSLPTIRERIEAMTAEASKL-KIDYLLEE-TP----ENNPYISAQSALNKSNQFDA 181 (277)
37310 T ss_dssp HHHHHHHHTSCTT-CCEEEEEESCTTSHHHHHHHHHHHHHHHHT-TCEEEEEE-CC----SSCHHHHHHHHHHTGGGCSE
37311 T ss_pred HHHHHHHHHHHhc-CceEEEEeCCCCCHHHHHHHHHHHHHHHHC-CCceeecC-CC----CCCHHHHHHHHHhhCCCCCE
37312 Confidence 7777777777553 5788888743 334456777888877765 34432111 11 0111122233322 135777
37313
37314
37315 Q NP_000836.2 278 VIMFANEDDIRRILEAAKKLNQS 300 (908)
37316 Q Consensus 278 iv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
37317 |++.. +..+..+++++++.|+.
37318 T Consensus 182 i~~~~-d~~a~~~~~al~~~g~~ 203 (277)
37319 T 3HS3_B 182 IITVN-DLYAAEIIKEAKRRNLK 203 (277)
37320 T ss_dssp EECSS-HHHHHHHHHHHHHTTCC
37321 T ss_pred EEEcC-HHHHHHHHHHHHHCCCC
37322 Confidence 76663 44566778888887763
37323
37324
37325 No 300
37326 >3JVD_A Transcriptional regulators; STRUCTURAL GENOMICS, PSI-2, SUGAR BINDING; HET: SO4; 2.3A {Corynebacterium glutamicum}
37327 Probab=95.72 E-value=0.00012 Score=74.15 Aligned_cols=192 Identities=13% Similarity=0.121 Sum_probs=105.9 Template_Neff=11.400
37328
37329 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
37330 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
37331 .+..+||++.|..+. .++..+..+++.++++. |+++. +.+.. ++ +...+.+++
37332 T Consensus 62 ~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~--------g~~~~--~~~~~-~~----~~~~~~~~~ 114 (333)
37333 T 3JVD_A 62 HRSALVGVIVPDLSN------------EYYSESLQTIQQDLKAA--------GYQML--VAEAN-SV----QAQDVVMES 114 (333)
37334 T ss_dssp --CCEEEEEESCSSS------------HHHHHHHHHHHHHHHHH--------TCEEE--EEECC-SH----HHHHHHHHH
37335 T ss_pred CCCCEEEEEeCCCCC------------hhHHHHHHHHHHHHHHc--------CCeEE--EEECC-CH----HHHHHHHHH
37336 Confidence 467889999886432 24556667777666553 22332 33322 11 122233333
37337
37338
37339 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
37340 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
37341 ++. .++|++|...... .+...++|+|..+...+. +....+..++...
37342 T Consensus 115 l~~-------------------~~~d~ii~~~~~~-------~~~~~~ipvv~~~~~~~~-------~~~~~v~~d~~~~ 161 (333)
37343 T 3JVD_A 115 LIS-------------------IQAAGIIHVPVVG-------SIAPEGIPMVQLTRGELG-------PGFPRVLCDDEAG 161 (333)
37344 T ss_dssp HHH-------------------HTCSEEEECCCTT-------CCC-CCSCEEEECC-----------CCSCEEEECHHHH
37345 T ss_pred HHh-------------------cCCCEEEEecccc-------cccCCCCCEEEEcCCCCC-------CCCCEEEeCcHHH
37346 Confidence 332 4778887643221 356679999987764321 2345666666667
37347
37348
37349 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
37350 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
37351 +..+++++.+.++++++++.... .....+.++|++.+++. ++.+..... . .+..+....++.+++..++|++++
37352 T Consensus 162 ~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~dai~~ 237 (333)
37353 T 3JVD_A 162 FFQLTESVLGGSGMNIAALVGEESLSTTQERMRGISHAASIY-GAEVTFHFG-H--YSVESGEEMAQVVFNNGLPDALIV 237 (333)
37354 T ss_dssp HHHHHHHHCCSSSCEEEEEESCTTSHHHHHHHHHHHHHHHHT-TCEEEEEEC-C--SSHHHHHHHHHHHHHTCCCSEEEE
37355 T ss_pred HHHHHHHHHcCCCCcEEEEECCcccchHHHHHHHHHHHHHHc-CCccEEEec-C--CCHHHHHHHHHHHHhCCCCCEEEE
37356 Confidence 77778887655788999887532 44566778888888775 344432100 0 111122334444432235778665
37357
37358
37359 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQ 299 (908)
37360 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~ 299 (908)
37361 .. +..+..+++++++.|+
37362 T Consensus 238 ~~-d~~a~~~~~al~~~g~ 255 (333)
37363 T 3JVD_A 238 AS-PRLMAGVMRAFTRLNV 255 (333)
37364 T ss_dssp CC-HHHHHHHHHHHHHTTC
37365 T ss_pred CC-HHHHHHHHHHHHHCCC
37366 Confidence 53 5556678888888776
37367
37368
37369 No 301
37370 >3JVD_B Transcriptional regulators; STRUCTURAL GENOMICS, PSI-2, SUGAR BINDING; HET: SO4; 2.3A {Corynebacterium glutamicum}
37371 Probab=95.72 E-value=0.00012 Score=74.15 Aligned_cols=192 Identities=13% Similarity=0.121 Sum_probs=106.7 Template_Neff=11.400
37372
37373 Q NP_000836.2 43 DGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFVQA 122 (908)
37374 Q Consensus 43 ~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~~~ 122 (908)
37375 .+..+||++.|..+. .++..+..+++.++++. |+++. +.+.. ++ +...+.+++
37376 T Consensus 62 ~~~~~I~~i~~~~~~------------~~~~~~~~g~~~~~~~~--------g~~~~--~~~~~-~~----~~~~~~~~~ 114 (333)
37377 T 3JVD_B 62 HRSALVGVIVPDLSN------------EYYSESLQTIQQDLKAA--------GYQML--VAEAN-SV----QAQDVVMES 114 (333)
37378 T ss_dssp --CCEEEEEESCTTC------------HHHHTTHHHHHHHHHHT--------TCEEE--EEECC-SH----HHHHHHHHH
37379 T ss_pred CCCCEEEEEeCCCCC------------hhHHHHHHHHHHHHHHc--------CCeEE--EEECC-CH----HHHHHHHHH
37380 Confidence 467889999886432 24556667777666553 22332 33322 11 122233333
37381
37382
37383 Q NP_000836.2 123 LIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQ 202 (908)
37384 Q Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (908)
37385 ++. .++|++|...... .+...++|+|..+...+. +....+..++...
37386 T Consensus 115 l~~-------------------~~~d~ii~~~~~~-------~~~~~~ipvv~~~~~~~~-------~~~~~v~~d~~~~ 161 (333)
37387 T 3JVD_B 115 LIS-------------------IQAAGIIHVPVVG-------SIAPEGIPMVQLTRGELG-------PGFPRVLCDDEAG 161 (333)
37388 T ss_dssp HHH-------------------TTCSEEEECCC-----------CCSSSCEEEESSCCCB-------TTBCEEEECHHHH
37389 T ss_pred HHh-------------------cCCCEEEEecccc-------cccCCCCCEEEEcCCCCC-------CCCCEEEeCcHHH
37390 Confidence 332 4778887643221 356679999987764321 2345666666667
37391
37392
37393 Q NP_000836.2 203 AQAMVDIVTALGWNYVSTLASEG--NYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIM 280 (908)
37394 Q Consensus 203 ~~~~~~~l~~~~~~~v~ii~~~~--~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~ 280 (908)
37395 +..+++++.+.++++++++.... .....+.++|++.+++. ++.+..... . .+..+....++.+++..++|++++
37396 T Consensus 162 ~~~~~~~l~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~dai~~ 237 (333)
37397 T 3JVD_B 162 FFQLTESVLGGSGMNIAALVGEESLSTTQERMRGISHAASIY-GAEVTFHFG-H--YSVESGEEMAQVVFNNGLPDALIV 237 (333)
37398 T ss_dssp HHHHHHHHCCSSSCEEEEEESCTTSHHHHHHHHHHHHHHHHT-TCEEEEEEC-C--SSHHHHHHHHHHHHHTCCCSEEEE
37399 T ss_pred HHHHHHHHHcCCCCcEEEEECCcccchHHHHHHHHHHHHHHc-CCccEEEec-C--CCHHHHHHHHHHHHhCCCCCEEEE
37400 Confidence 77778887655788999887532 44566778888888775 344432100 0 111122334444432235778665
37401
37402
37403 Q NP_000836.2 281 FANEDDIRRILEAAKKLNQ 299 (908)
37404 Q Consensus 281 ~~~~~~~~~~l~~~~~~g~ 299 (908)
37405 .. +..+..+++++++.|+
37406 T Consensus 238 ~~-d~~a~~~~~al~~~g~ 255 (333)
37407 T 3JVD_B 238 AS-PRLMAGVMRAFTRLNV 255 (333)
37408 T ss_dssp CC-HHHHHHHHHHHHHTTC
37409 T ss_pred CC-HHHHHHHHHHHHHCCC
37410 Confidence 53 5556678888888776
37411
37412
37413 No 302
37414 >3S99_A Basic membrane lipoprotein; SSGCID, Basic membrane lipoprotein, Structural; HET: IOD, ADE; 2.05A {Brucella melitensis biovar Abortus}
37415 Probab=95.68 E-value=0.00014 Score=74.71 Aligned_cols=216 Identities=7% Similarity=-0.005 Sum_probs=102.9 Template_Neff=10.300
37416
37417 Q NP_000836.2 27 MMQRTHSQEYAHSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTC 106 (908)
37418 Q Consensus 27 ~~~~~~~~~~~~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~ 106 (908)
37419 ||...+ ...+......+..+||++.|..... ..+......+++.++++. |+.+++.+.+..
37420 T Consensus 9 ~~~~~~-~~~~~~~~~~~~~~I~~v~~~~~~d----------~~~~~~~~~g~~~~~~~~--------g~~v~~~~~~~~ 69 (356)
37421 T 3S99_A 9 MGTLEA-QTQGPGSMAEEKLKVGFIYIGPPGD----------FGWTYQHDQARKELVEAL--------GDKVETTFLENV 69 (356)
37422 T ss_dssp ------------------CEEEEEECSSCGGG----------SSHHHHHHHHHHHHHHHH--------TTTEEEEEECSC
37423 T ss_pred cccccc-cCCCCCCccccccEEEEEEccCCCc----------cchHHHHHHHHHHHHHHH--------CCCeEEEEEecC
37424 Confidence 444333 3334446667889999999753210 024456667777666653 232344444432
37425
37426
37427 Q NP_000836.2 107 SRDTYALEQSLTFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILR-LFKIPQISYASTAPELSD 185 (908)
37428 Q Consensus 107 ~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~-~~~iP~Is~~~~~~~l~~ 185 (908)
37429 .+. ....+.+++++. .++|+||+...... ..+..+++ ..++|++..+...+
37430 T Consensus 70 ~~~----~~~~~~i~~~~~-------------------~~~d~II~~~~~~~-~~~~~~~~~~~~ip~v~~~~~~~---- 121 (356)
37431 T 3S99_A 70 AEG----ADAERSIKRIAR-------------------AGNKLIFTTSFGYM-DPTVKVAKKFPDVKFEHATGYKT---- 121 (356)
37432 T ss_dssp CTT----HHHHHHHHHHHH-------------------TTCSEEEECSGGGH-HHHHHHHTTCTTSEEEEESCCCC----
37433 T ss_pred CCh----hhHHHHHHHHHH-------------------cCCCEEEEcChhhh-HHHHHHHHHCCCCEEEEccCCCC----
37434 Confidence 221 122233333332 57888886543322 22223333 36899888765332
37435
37436
37437 Q NP_000836.2 186 NTRYDFFSRVVPPDSYQAQAMVDIVTA-LGWNYVSTLASEG-NYGESGVEAFTQISREIG-GVCIAQSQKIPREP-RPGE 261 (908)
37438 Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v~ii~~~~-~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~-~~~~ 261 (908)
37439 .+++..+..+....+..++.++.. .+.++|+++.... .....+.++|.+.+++.+ .+.+... +..+. +...
37440 T Consensus 122 ---~~n~~~v~~d~~~~~~~ag~~~~~~~~~~~i~~i~~~~~~~~~~~~~gf~~~~~~~~~~~~~~~~--~~~~~~d~~~ 196 (356)
37441 T 3S99_A 122 ---ADNMSAYNARFYEGRYVQGVIAAKMSKKGIAGYIGSVPVPEVVQGINSFMLGAQSVNPDFRVKVI--WVNSWFDPGK 196 (356)
37442 T ss_dssp ---BTTEEEEEECHHHHHHHHHHHHHHHCSSCEEEEEECCCCHHHHHHHHHHHHHHHTTCTTCEEEEE--ECSSSCCHHH
37443 T ss_pred ---CCCeEEEeeehHHHHHHHHHHHHHHcCCCeeEEEeCCCChHHhhhHHHHHHHHHHhCCCCEEEEE--EcCCCCChhH
37444 Confidence 134455556655566666665543 4667899887432 334566777777776532 1222111 11001 1112
37445
37446
37447 Q NP_000836.2 262 FEKIIKRLLETPNARAVIMFANEDDIRRILEAAKKLN 298 (908)
37448 Q Consensus 262 ~~~~~~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g 298 (908)
37449 ..+.+++++. .++|+|+...+ +..+++++++.+
37450 T Consensus 197 ~~~~~~~ll~-~~~d~I~~~~~---a~~v~~a~~~~g 229 (356)
37451 T 3S99_A 197 EADAAKALID-QGVDIITQHTD---STAAIQVAHDRG 229 (356)
37452 T ss_dssp HHHHHHHHHH-TTCSEEEESSS---SSHHHHHHHHTT
37453 T ss_pred HHHHHHHHHH-CCCCEEEeCCC---CHHHHHHHHHcC
37454 Confidence 2344555553 47888877653 456777776654
37455
37456
37457 No 303
37458 >6DSP_B Autoinducer 2-binding protein LsrB; AI-2 receptor, SIGNALING PROTEIN; HET: PAV; 1.37A {Clostridium saccharobutylicum DSM 13864}
37459 Probab=95.34 E-value=0.00028 Score=71.90 Aligned_cols=221 Identities=6% Similarity=-0.041 Sum_probs=98.5 Template_Neff=11.100
37460
37461 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSL 117 (908)
37462 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
37463 ......+..+||++.+.... .+...+..+++.++++. |+++.+.. +...++ ....
37464 T Consensus 14 ~~~~~~~~~~Igvi~~~~~~------------~~~~~~~~g~~~~a~~~--------g~~~~~~~-~~~~~~----~~~~ 68 (347)
37465 T 6DSP_B 14 TNSSKKGNVTVTFIPKLTGN------------AFFESANKGAQKYSEQW--------GFKVDYEG-DANASA----ASQV 68 (347)
37466 T ss_dssp --------CEEEEECSCSSS------------HHHHHHHHHHHHHHHHH--------TCEEEECC-CSSCCH----HHHH
37467 T ss_pred cCccCCCCeEEEEEecCCCC------------HHHHHHHHHHHHHHHHH--------CCEEEEEc-CCCCCH----HHHH
37468 Confidence 34566778999999875332 24456667777666653 23333321 222221 1222
37469
37470
37471 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVV 196 (908)
37472 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~ 196 (908)
37473 +.+++++. +++|++|....... .......+...++|+|.++...+. .....+.+.
37474 T Consensus 69 ~~~~~l~~-------------------~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvv~~~~~~~~-----~~~~~~~v~ 124 (347)
37475 T 6DSP_B 69 SVINKAVQ-------------------QGTNAICLSSVDAAGVKDALKAAADAGVTVTTWDSDVDP-----SVRKVMVSQ 124 (347)
37476 T ss_dssp HHHHHHHH-------------------TTCSEEEECCSCHHHHHHHHHHHHHTTCEEEEESSCCCG-----GGCSEEEES
37477 T ss_pred HHHHHHHH-------------------cCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEECCCCCc-----ccceeEEee
37478 Confidence 33443332 47888776433222 223445566789999988754321 011233444
37479
37480
37481 Q NP_000836.2 197 PPDSYQAQAMVDIVTALGWN------YVST--LAS-EG-N---YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFE 263 (908)
37482 Q Consensus 197 ~~~~~~~~~~~~~l~~~~~~------~v~i--i~~-~~-~---~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~ 263 (908)
37483 .++...++.+++++.+.+.+ ++++ +.. .. . ....+...++...++..++.+.....+....+..+..
37484 T Consensus 125 ~d~~~~g~~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (347)
37485 T 6DSP_B 125 GTPEQLGQMLVQMGYDSLKERGKDPEKDAIKYCWHYSNATVTDQNSWQVEGEKYIKSKYPNWQNVAPDNYYSNQDAEQAI 204 (347)
37486 T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCCTTTSCCEEEEEESCSSCHHHHHHHHHHHHHHHHHCTTCEESCTTCEECTTCHHHHH
37487 T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcccccceEEEEecCCCcchHHHHHHHHHHHHHHHCCCcEEccCCCCCCCCCHHHHH
37488 Confidence 55666677777776443322 3333 221 11 1 1112333343333322123322111001001112233
37489
37490
37491 Q NP_000836.2 264 KIIKRLLET-PNARAVIMFANEDDIRRILEAAKKLNQS-GHFLWIGS 308 (908)
37492 Q Consensus 264 ~~~~~l~~~-~~~~viv~~~~~~~~~~~l~~~~~~g~~-~~~~~i~~ 308 (908)
37493 ..++++++. .++++|++. ++..+..+++++++.|+. .++.+++.
37494 T Consensus 205 ~~~~~~l~~~~~~dai~~~-~d~~a~~~~~al~~~g~~p~~v~v~g~ 250 (347)
37495 T 6DSP_B 205 SVGESILSAHSDIDLIICN-DSTALPGQAQAAQNKGLTAKNVTITGF 250 (347)
37496 T ss_dssp HHHHHHHHHCTTCCEEEEC-STTHHHHHHHHHHHTTCCTTTCEEEEB
37497 T ss_pred HHHHHHHHHCCCcCEEEEc-CCCchHHHHHHHHHCCCCCCCeEEEeC
37498 Confidence 445555431 246777663 444556778888887764 23444443
37499
37500
37501 No 304
37502 >2FQW_A Membrane lipoprotein tmpC; ABC transport system, ligand-binding protein; HET: NOS; 1.71A {Treponema pallidum}
37503 Probab=95.31 E-value=0.0003 Score=70.64 Aligned_cols=146 Identities=10% Similarity=0.046 Sum_probs=74.4 Template_Neff=11.200
37504
37505 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANIL-RLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAM----VDIVTALGWNYVS 219 (908)
37506 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~-~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~v~ 219 (908)
37507 +++++||+...... .....++ +..++|++..+...+. .+++..+..+....+..+ ++++.+.+.++++
37508 T Consensus 61 ~~~d~Ii~~~~~~~-~~~~~~~~~~~~i~~v~~~~~~~~------~~~~~~v~~~~~~~~~~~g~~a~~~~~~~g~~~i~ 133 (318)
37509 T 2FQW_A 61 ENMGLVVACGSFLV-EAVIETSARFPKQKFLVIDAVVQD------RDNVVSAVFGQNEGSFLVGVAAALKAKEAGKSAVG 133 (318)
37510 T ss_dssp TTCSEEEEESGGGH-HHHHHHHHHCTTSCEEEESSCCCS------CTTEEEEEECHHHHHHHHHHHHHHHHHHTTCCEEE
37511 T ss_pred CCCCEEEEcCHHHH-HHHHHHHHHCCCCeEEEEeccCCC------cccEEEEeechhHHHHHHHHHHHHHHHHcCCCEEE
37512 Confidence 47888886543322 1222222 3458998887654321 122333334433333333 4455445678999
37513
37514
37515 Q NP_000836.2 220 TLASEG-NYGESGVEAFTQISREIGGVCIAQSQKIPREP-RPGEFEKIIKRLLETPNARAVIMFANEDDIRRILEAAKKL 297 (908)
37516 Q Consensus 220 ii~~~~-~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~ 297 (908)
37517 ++.... .....+.++|++.+++.+ ..+.....+..+. +.....+.++++.. .++|+|+... +..+..+++++++.
37518 T Consensus 134 ~i~~~~~~~~~~~~~gf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~i~~~~-~~~~~~~~~a~~~~ 210 (318)
37519 T 2FQW_A 134 FIVGMELGMMPLFEAGFEAGVKAVD-PDIQVVVEVANTFSDPQKGQALAAKLYD-SGVNVIFQVA-GGTGNGVIKEARDR 210 (318)
37520 T ss_dssp EEESCCSTTTHHHHHHHHHHHHHHC-TTCEEEEEECSCSSCHHHHHHHHHHHHH-TTCCEEEEEC-GGGHHHHHHHHHHH
37521 T ss_pred EEecccCcchhHHHHHHHHHHHHHC-CCCEEEEEEcCCCCCHHHHHHHHHHHHH-cCCCEEEEcC-cHHhHHHHHHHHHh
37522 Confidence 998432 344556677777776532 2211111111001 11123344555553 4788887764 33455677888777
37523
37524
37525 Q NP_000836.2 298 NQS 300 (908)
37526 Q Consensus 298 g~~ 300 (908)
37527 |+.
37528 T Consensus 211 g~~ 213 (318)
37529 T 2FQW_A 211 RLN 213 (318)
37530 T ss_dssp HHT
37531 T ss_pred hcC
37532 Confidence 653
37533
37534
37535 No 305
37536 >2FQX_A Membrane lipoprotein tmpC; ABC transport system, ligand-binding protein; HET: GMP; 1.7A {Treponema pallidum}
37537 Probab=95.31 E-value=0.0003 Score=70.64 Aligned_cols=146 Identities=10% Similarity=0.046 Sum_probs=74.4 Template_Neff=11.200
37538
37539 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANIL-RLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAM----VDIVTALGWNYVS 219 (908)
37540 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~-~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~v~ 219 (908)
37541 +++++||+...... .....++ +..++|++..+...+. .+++..+..+....+..+ ++++.+.+.++++
37542 T Consensus 61 ~~~d~Ii~~~~~~~-~~~~~~~~~~~~i~~v~~~~~~~~------~~~~~~v~~~~~~~~~~~g~~a~~~~~~~g~~~i~ 133 (318)
37543 T 2FQX_A 61 ENMGLVVACGSFLV-EAVIETSARFPKQKFLVIDAVVQD------RDNVVSAVFGQNEGSFLVGVAAALKAKEAGKSAVG 133 (318)
37544 T ss_dssp TTCSEEEEESTTTH-HHHHHHHHHCTTSCEEEESSCCCS------CTTEEEEEECHHHHHHHHHHHHHHHHHHTTCCEEE
37545 T ss_pred CCCCEEEEcCHHHH-HHHHHHHHHCCCCeEEEEeccCCC------cccEEEEeechhHHHHHHHHHHHHHHHHcCCCEEE
37546 Confidence 47888886543322 1222222 3458998887654321 122333334433333333 4455445678999
37547
37548
37549 Q NP_000836.2 220 TLASEG-NYGESGVEAFTQISREIGGVCIAQSQKIPREP-RPGEFEKIIKRLLETPNARAVIMFANEDDIRRILEAAKKL 297 (908)
37550 Q Consensus 220 ii~~~~-~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~ 297 (908)
37551 ++.... .....+.++|++.+++.+ ..+.....+..+. +.....+.++++.. .++|+|+... +..+..+++++++.
37552 T Consensus 134 ~i~~~~~~~~~~~~~gf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~i~~~~-~~~~~~~~~a~~~~ 210 (318)
37553 T 2FQX_A 134 FIVGMELGMMPLFEAGFEAGVKAVD-PDIQVVVEVANTFSDPQKGQALAAKLYD-SGVNVIFQVA-GGTGNGVIKEARDR 210 (318)
37554 T ss_dssp EEESCCSTTTHHHHHHHHHHHHHHC-TTCEEEEEECSCSSCHHHHHHHHHHHHH-TTCCEEEEEC-GGGHHHHHHHHHHH
37555 T ss_pred EEecccCcchhHHHHHHHHHHHHHC-CCCEEEEEEcCCCCCHHHHHHHHHHHHH-cCCCEEEEcC-cHHhHHHHHHHHHh
37556 Confidence 998432 344556677777776532 2211111111001 11123344555553 4788887764 33455677888777
37557
37558
37559 Q NP_000836.2 298 NQS 300 (908)
37560 Q Consensus 298 g~~ 300 (908)
37561 |+.
37562 T Consensus 211 g~~ 213 (318)
37563 T 2FQX_A 211 RLN 213 (318)
37564 T ss_dssp HHT
37565 T ss_pred hcC
37566 Confidence 653
37567
37568
37569 No 306
37570 >2FQY_A Membrane lipoprotein tmpC; ABC receptor protein, nucleoside binding; HET: ADN; 1.9A {Treponema pallidum}
37571 Probab=95.31 E-value=0.0003 Score=70.64 Aligned_cols=146 Identities=10% Similarity=0.046 Sum_probs=74.4 Template_Neff=11.200
37572
37573 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANIL-RLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAM----VDIVTALGWNYVS 219 (908)
37574 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~-~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~v~ 219 (908)
37575 +++++||+...... .....++ +..++|++..+...+. .+++..+..+....+..+ ++++.+.+.++++
37576 T Consensus 61 ~~~d~Ii~~~~~~~-~~~~~~~~~~~~i~~v~~~~~~~~------~~~~~~v~~~~~~~~~~~g~~a~~~~~~~g~~~i~ 133 (318)
37577 T 2FQY_A 61 ENMGLVVACGSFLV-EAVIETSARFPKQKFLVIDAVVQD------RDNVVSAVFGQNEGSFLVGVAAALKAKEAGKSAVG 133 (318)
37578 T ss_dssp TTCSEEEEESGGGH-HHHHHHHHHCTTSCEEEESSCCCS------CTTEEEEEECHHHHHHHHHHHHHHHHHHTTCSEEE
37579 T ss_pred CCCCEEEEcCHHHH-HHHHHHHHHCCCCeEEEEeccCCC------cccEEEEeechhHHHHHHHHHHHHHHHHcCCCEEE
37580 Confidence 47888886543322 1222222 3458998887654321 122333334433333333 4455445678999
37581
37582
37583 Q NP_000836.2 220 TLASEG-NYGESGVEAFTQISREIGGVCIAQSQKIPREP-RPGEFEKIIKRLLETPNARAVIMFANEDDIRRILEAAKKL 297 (908)
37584 Q Consensus 220 ii~~~~-~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~ 297 (908)
37585 ++.... .....+.++|++.+++.+ ..+.....+..+. +.....+.++++.. .++|+|+... +..+..+++++++.
37586 T Consensus 134 ~i~~~~~~~~~~~~~gf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~i~~~~-~~~~~~~~~a~~~~ 210 (318)
37587 T 2FQY_A 134 FIVGMELGMMPLFEAGFEAGVKAVD-PDIQVVVEVANTFSDPQKGQALAAKLYD-SGVNVIFQVA-GGTGNGVIKEARDR 210 (318)
37588 T ss_dssp EEESCCSTTTHHHHHHHHHHHHHHC-TTCEEEEEECSCSSCHHHHHHHHHHHHH-TTCCEEEEEC-HHHHHHHHHHHHHH
37589 T ss_pred EEecccCcchhHHHHHHHHHHHHHC-CCCEEEEEEcCCCCCHHHHHHHHHHHHH-cCCCEEEEcC-cHHhHHHHHHHHHh
37590 Confidence 998432 344556677777776532 2211111111001 11123344555553 4788887764 33455677888777
37591
37592
37593 Q NP_000836.2 298 NQS 300 (908)
37594 Q Consensus 298 g~~ 300 (908)
37595 |+.
37596 T Consensus 211 g~~ 213 (318)
37597 T 2FQY_A 211 RLN 213 (318)
37598 T ss_dssp HHT
37599 T ss_pred hcC
37600 Confidence 653
37601
37602
37603 No 307
37604 >3H5T_A Transcriptional regulator, LacI family; Transcriptional regulator, DNA-dependent, Protein Structure; 2.53A {Corynebacterium glutamicum}
37605 Probab=95.00 E-value=0.00053 Score=70.44 Aligned_cols=146 Identities=15% Similarity=0.125 Sum_probs=82.3 Template_Neff=10.800
37606
37607 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASE 224 (908)
37608 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~ 224 (908)
37609 .++|++|....... ......+...++|+|..+...+ .+.+..+..++...++.+++++.+.+.++|+++...
37610 T Consensus 127 ~~~dgii~~~~~~~-~~~~~~~~~~~ipvV~~~~~~~-------~~~~~~v~~d~~~~g~~~~~~l~~~g~~~i~~i~~~ 198 (366)
37611 T 3H5T_A 127 AAVDGVVIYSVAKG-DPHIDAIRARGLPAVIADQPAR-------EEGMPFIAPNNRKAIAPAAQALIDAGHRKIGILSIR 198 (366)
37612 T ss_dssp CCCSCEEEESCCTT-CHHHHHHHHHTCCEEEESSCCS-------CTTCCEEEECHHHHTHHHHHHHHHTTCCSEEEEEEC
37613 T ss_pred CCCCEEEEEccCCC-ChHHHHHHHcCCCEEEeCCCcc-------cCCCCEEecChHHHHHHHHHHHHHCCCCcEEEEeCC
37614 Confidence 47787775433322 2333455667999998875432 123445556667778888888876688899998743
37615
37616
37617 Q NP_000836.2 225 G-------------------NYGESGVEAFTQISREIGGVCIAQSQKIPRE-PRPGEFEKIIKRLLE-TPNARAVIMFAN 283 (908)
37618 Q Consensus 225 ~-------------------~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~-~~~~~~~~~~~~l~~-~~~~~viv~~~~ 283 (908)
37619 . .....+.+++.+.+++. ++.+......... .+..+....++++++ ..++++|++..
37620 T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~- 276 (366)
37621 T 3H5T_A 199 LDRANNDGEVTRERLENAQYQVQRDRVRGAMEVFIEA-GIDPGTVPIMECWINNRQHNFEVAKELLETHPDLTAVLCTV- 276 (366)
37622 T ss_dssp CSSSCCCEECCHHHHHTCCCTTHHHHHHHHHHHHHHH-TCCGGGSCEEEESSCCHHHHHHHHHHHHHHCTTCCEEEESS-
37623 T ss_pred ccccCCCCccchHHHHhhchHHHHHHHHHHHHHHHHC-CCCCCCCccccccccchhhHHHHHHHHHHhCCCccEEEECC-
37624 Confidence 2 23445667777777664 3433211111000 011123334444442 12467776654
37625
37626
37627 Q NP_000836.2 284 EDDIRRILEAAKKLNQS 300 (908)
37628 Q Consensus 284 ~~~~~~~l~~~~~~g~~ 300 (908)
37629 +..+..+++++.+.|+.
37630 T Consensus 277 d~~a~~~~~al~~~g~~ 293 (366)
37631 T 3H5T_A 277 DALAFGVLEYLKSVGKS 293 (366)
37632 T ss_dssp HHHHHHHHHHHHHTTCC
37633 T ss_pred HHHHHHHHHHHHHcCCC
37634 Confidence 44566777888777764
37635
37636
37637 No 308
37638 >6NDI_A Hypothetical Protein CD630_05490; Structural Genomics, Center for Structural; HET: MSE; 2.6A {Klebsiella pneumoniae subsp. pneumoniae}
37639 Probab=94.87 E-value=0.00064 Score=68.56 Aligned_cols=144 Identities=12% Similarity=0.080 Sum_probs=79.7 Template_Neff=11.600
37640
37641 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASE 224 (908)
37642 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~ 224 (908)
37643 .++|++|........... ..+..++|+|..+...+ .+....+..++...++.+++++.+.+.++++++...
37644 T Consensus 119 ~~~d~ii~~~~~~~~~~~--~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~~g~~~~~~l~~~g~~~i~~i~~~ 189 (334)
37645 T 6NDI_A 119 HRPDGIIFTTMGLRQVPL--PEKLLTLPCVLANCESL-------SQPVASYIPDDEQGQYDAVKALLAAGYRRPLCLHLP 189 (334)
37646 T ss_dssp TCCSEEEEEEEEEECCCS--CGGGSSSCSEEEEECCS-------SSCCEEEEECHHHHHHHHHHHHHHTTCCCEEEEECC
37647 T ss_pred cCCCEEEEeCCCCCCCCC--chHHcCCCEEEEcCCcc-------CCCceEEEcCCHHHHHHHHHHHHHCCCCcEEEEeCC
37648 Confidence 478877764332222221 22347999988765432 123455666777778888888766788899998843
37649
37650
37651 Q NP_000836.2 225 G--NYGESGVEAFTQISREIGGVCIAQSQ--KIP-REPRPG-EFEKIIKRLLE-TPNARAVIMFANEDDIRRILEAAKKL 297 (908)
37652 Q Consensus 225 ~--~~~~~~~~~~~~~~~~~~~i~v~~~~--~~~-~~~~~~-~~~~~~~~l~~-~~~~~viv~~~~~~~~~~~l~~~~~~ 297 (908)
37653 . .....+.++|++.+++. ++.+.... ... .+.... ......+.+++ ..++++|++.. +..+..+++++++.
37654 T Consensus 190 ~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ai~~~~-d~~a~~~~~~l~~~ 267 (334)
37655 T 6NDI_A 190 ASQPATIRRRRGLERACREA-GIEPDHLSHSYMGQGDEHYHDIPAVVLAHIREGKPGFDSVICGN-DRIAFMVYQTLLGQ 267 (334)
37656 T ss_dssp TTSHHHHHHHHHHHHHHHHT-TCCGGGSCEEECCSSGGGGGGHHHHHHHTEETTEESCSEEEESS-HHHHHHHHHHHHHT
37657 T ss_pred CCChHHHHHHHHHHHHHHHc-CCCcccccccccCCCCcccccHHHHHHHHHHhCCCCCcEEEECC-HHHHHHHHHHHHHC
37658 Confidence 2 24556777888887765 34332110 000 000011 11122233322 13567776653 44566788888887
37659
37660
37661 Q NP_000836.2 298 NQ 299 (908)
37662 Q Consensus 298 g~ 299 (908)
37663 |+
37664 T Consensus 268 g~ 269 (334)
37665 T 6NDI_A 268 GL 269 (334)
37666 T ss_dssp TC
37667 T ss_pred CC
37668 Confidence 76
37669
37670
37671 No 309
37672 >6NDI_B Hypothetical Protein CD630_05490; Structural Genomics, Center for Structural; HET: MSE; 2.6A {Klebsiella pneumoniae subsp. pneumoniae}
37673 Probab=94.87 E-value=0.00064 Score=68.56 Aligned_cols=144 Identities=12% Similarity=0.080 Sum_probs=79.7 Template_Neff=11.600
37674
37675 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASE 224 (908)
37676 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~ 224 (908)
37677 .++|++|........... ..+..++|+|..+...+ .+....+..++...++.+++++.+.+.++++++...
37678 T Consensus 119 ~~~d~ii~~~~~~~~~~~--~~~~~~ipvv~~~~~~~-------~~~~~~v~~d~~~~g~~~~~~l~~~g~~~i~~i~~~ 189 (334)
37679 T 6NDI_B 119 HRPDGIIFTTMGLRQVPL--PEKLLTLPCVLANCESL-------SQPVASYIPDDEQGQYDAVKALLAAGYRRPLCLHLP 189 (334)
37680 T ss_dssp TCCSEEEEEEEEEECCCS--CGGGSSSCSEEEEECCS-------SSCCEEEEECHHHHHHHHHHHHHHTTCCCEEEEECC
37681 T ss_pred cCCCEEEEeCCCCCCCCC--chHHcCCCEEEEcCCcc-------CCCceEEEcCCHHHHHHHHHHHHHCCCCcEEEEeCC
37682 Confidence 478877764332222221 22347999988765432 123455666777778888888766788899998843
37683
37684
37685 Q NP_000836.2 225 G--NYGESGVEAFTQISREIGGVCIAQSQ--KIP-REPRPG-EFEKIIKRLLE-TPNARAVIMFANEDDIRRILEAAKKL 297 (908)
37686 Q Consensus 225 ~--~~~~~~~~~~~~~~~~~~~i~v~~~~--~~~-~~~~~~-~~~~~~~~l~~-~~~~~viv~~~~~~~~~~~l~~~~~~ 297 (908)
37687 . .....+.++|++.+++. ++.+.... ... .+.... ......+.+++ ..++++|++.. +..+..+++++++.
37688 T Consensus 190 ~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ai~~~~-d~~a~~~~~~l~~~ 267 (334)
37689 T 6NDI_B 190 ASQPATIRRRRGLERACREA-GIEPDHLSHSYMGQGDEHYHDIPAVVLAHIREGKPGFDSVICGN-DRIAFMVYQTLLGQ 267 (334)
37690 T ss_dssp TTSHHHHHHHHHHHHHHHHT-TCCGGGSCEEECCSSGGGGGGHHHHHHHTEETTEESCSEEEESS-HHHHHHHHHHHHHT
37691 T ss_pred CCChHHHHHHHHHHHHHHHc-CCCcccccccccCCCCcccccHHHHHHHHHHhCCCCCcEEEECC-HHHHHHHHHHHHHC
37692 Confidence 2 24556777888887765 34332110 000 000011 11122233322 13567776653 44566788888887
37693
37694
37695 Q NP_000836.2 298 NQ 299 (908)
37696 Q Consensus 298 g~ 299 (908)
37697 |+
37698 T Consensus 268 g~ 269 (334)
37699 T 6NDI_B 268 GL 269 (334)
37700 T ss_dssp TC
37701 T ss_pred CC
37702 Confidence 76
37703
37704
37705 No 310
37706 >4IIL_A Membrane lipoprotein TpN38(b); periplasmic-binding protein, riboflavin transport, MEMBRANE; HET: EDO, RBF; 1.3A {Treponema pallidum subsp. pallidum}
37707 Probab=94.79 E-value=0.00072 Score=68.72 Aligned_cols=212 Identities=10% Similarity=0.067 Sum_probs=105.5 Template_Neff=10.600
37708
37709 Q NP_000836.2 40 IRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTF 119 (908)
37710 Q Consensus 40 ~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~ 119 (908)
37711 ....++.+||++.|..... ..+......+++.++++.|..+ .++.+ .+.+...+. +...+.
37712 T Consensus 27 ~~~~~~~~I~~i~~~~~~~----------~~~~~~~~~gi~~~~~~~~~~g---~~~~~--~~~~~~~~~----~~~~~~ 87 (346)
37713 T 4IIL_A 27 VQDERAVRIAVFVPGFRHD----------SPVYAMLCDGVERAVTQERATG---RSIGL--DIIEAGPNQ----ALWREK 87 (346)
37714 T ss_dssp ----CCEEEEEEESSCSTT----------CHHHHHHHHHHHHHHHHHHTTT---CCEEE--EEEECCSCG----GGHHHH
37715 T ss_pred CCCccCceEEEEeCCCCCC----------ChHHHHHHHHHHHHHHHHHhcc---ccccc--EEEEcCCCH----HHHHHH
37716 Confidence 4456789999999764211 1255677788888888765321 12233 333332121 122333
37717
37718
37719 Q NP_000836.2 120 VQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANIL-RLFKIPQISYASTAPELSDNTRYDFFSRVVPP 198 (908)
37720 Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~-~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~ 198 (908)
37721 +++++. .+++|+||+...... .....++ ...++|+|..+...+. .+.+..+..+
37722 T Consensus 88 l~~~~~------------------~~~~d~Ii~~~~~~~-~~~~~~~~~~~~i~~v~~~~~~~~------~~~~~~v~~d 142 (346)
37723 T 4IIL_A 88 LAHLAA------------------EQRYRLIVSSNPALP-HVLEPILRQFPLQRFLVLDAYAPQ------EHSLITFRYN 142 (346)
37724 T ss_dssp HHHHHH------------------TTCCSEEEEESTTHH-HHHHHHHHHCTTCCEEEESCCCTT------CSSEEEEEEC
37725 T ss_pred HHHHHH------------------hCCCCEEEEcChhhH-HHHHHHHHHCCCCEEEEEeCCCCC------CCcEEEEEEc
37726 Confidence 333321 157888886543222 2222232 3568998887654321 1233444455
37727
37728
37729 Q NP_000836.2 199 DSYQAQAMVDIVTA---------LGWNYVSTLASEGN-YGESG-VEAFTQISREIG-GVCIAQSQKIPREP-RPGEFEKI 265 (908)
37730 Q Consensus 199 ~~~~~~~~~~~l~~---------~~~~~v~ii~~~~~-~~~~~-~~~~~~~~~~~~-~i~v~~~~~~~~~~-~~~~~~~~ 265 (908)
37731 ....+..++.++.. .+.++|+++..... ....+ .++|++.+++.+ .+++... +..+. +.....+.
37732 T Consensus 143 ~~~~~~~ag~~~~~~~~~~~~~~~g~~~i~~i~~~~~~~~~~r~~~gf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 220 (346)
37733 T 4IIL_A 143 QWEQAYLAGHLSALVSASAMRFANADKKIGLIAGQSYPVMTQTIIPAFLAGARAVDPAFEVDVR--VVGNWYDAAKSADL 220 (346)
37734 T ss_dssp HHHHHHHHHHHHHHHHHSCCTTCCSSCEEEEEESSCCHHCCCCCHHHHHHHHHHHCTTCEEEEE--ECSSSSCHHHHHHH
37735 T ss_pred HHHHHHHHHHHHHHHhhhHhhhhcCCCEEEEEeCcCCcchhhhHHHHHHHHHHHhCCCCEEEEE--EecCCCCHHHHHHH
37736 Confidence 55455554444422 25678998885432 22233 677777776531 1222111 11001 11223445
37737
37738
37739 Q NP_000836.2 266 IKRLLETPNARAVIMFANEDDIRRILEAAKKLNQ 299 (908)
37740 Q Consensus 266 ~~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g~ 299 (908)
37741 ++++.. .++|+|+... +..+..+++++++.|.
37742 T Consensus 221 ~~~l~~-~~~d~i~~~~-~~~a~gv~~a~~~~gv 252 (346)
37743 T 4IIL_A 221 ARILFH-EGVDVMMPIC-GGANQGVLAAARELGF 252 (346)
37744 T ss_dssp HHHHHH-HTCCEEEEEC-GGGHHHHHHHCCCCCC
37745 T ss_pred HHHHHH-CCCCEEEECC-chhhHHHHHHHHHhCC
37746 Confidence 555553 4788887764 4445667777776653
37747
37748
37749 No 311
37750 >6PI6_C Atrazine periplasmic binding protein; SAD phasing, periplasmic binding protein; HET: OKM; 1.65A {Pseudomonas sp. (strain ADP)}
37751 Probab=94.78 E-value=0.00074 Score=68.92 Aligned_cols=206 Identities=6% Similarity=-0.033 Sum_probs=104.7 Template_Neff=10.200
37752
37753 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSL 117 (908)
37754 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
37755 ......+..+||+++|..... ..+......+++.++++.+ +.+.+.+.+...++ ....
37756 T Consensus 17 ~~~~~~~~~~I~~v~~~~~~d----------~~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~~~~~----~~~~ 74 (355)
37757 T 6PI6_C 17 RGSHMQEPLKVAFVYAGPVSD----------AGYTYAHDQGRLAMEKNLG--------AKVKSSYVENVPEG----ADAE 74 (355)
37758 T ss_dssp ------CCEEEEEECSSCGGG----------SSHHHHHHHHHHHHHHHHG--------GGEEEEEECSCCSG----GGHH
37759 T ss_pred CCCCCCCCeEEEEEEccCCCc----------cchHHHHHHHHHHHHHHhC--------CCcEEEEEecCCCc----ccHH
37760 Confidence 344566789999999864211 1245667777777777653 33443333322221 1222
37761
37762
37763 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRL-FKIPQISYASTAPELSDNTRYDFFSRVV 196 (908)
37764 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~-~~iP~Is~~~~~~~l~~~~~~~~~~~~~ 196 (908)
37765 +.+++++. .++|+||+...... ..+..++++ .++|+|..+...+ .+++..+.
37766 T Consensus 75 ~~l~~l~~-------------------~~~d~II~~~~~~~-~~~~~~a~~~~~i~~v~~~~~~~-------~~~~~~v~ 127 (355)
37767 T 6PI6_C 75 RVIRKLAA-------------------DGNKLIFTTSFGFM-NPTERVAKAFPNVVFEHATGVKL-------AKNLGVYE 127 (355)
37768 T ss_dssp HHHHHHHH-------------------TTCSEEEECSGGGH-HHHHHHHHHCTTSEEEEETCCCC-------BTTEEEEE
37769 T ss_pred HHHHHHHH-------------------CCCCEEEEcChhhH-HHHHHHHHHCCCCEEEEcccCCC-------cCCEEEec
37770 Confidence 33333332 46788876543322 223333433 6899988765432 12344555
37771
37772
37773 Q NP_000836.2 197 PPDSYQAQAMVDIVTA-LGWNYVSTLASE-GNYGESGVEAFTQISREIG-GVCIAQSQKIPREP-RPGEFEKIIKRLLET 272 (908)
37774 Q Consensus 197 ~~~~~~~~~~~~~l~~-~~~~~v~ii~~~-~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~-~~~~~~~~~~~l~~~ 272 (908)
37775 .+....+..++.++.. .+.++|+++... ......+.++|.+.+++.+ .+.+... +.... +.....+.+++++.
37776 T Consensus 128 ~d~~~~g~~ag~~a~~~~~~~~i~~i~~~~~~~~~~~~~gf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll~- 204 (355)
37777 T 6PI6_C 128 SRQYEGTYLQGVLAAKMTKTGVIGFVGSFPVPEVIRNINAYTLGAQSVNPKIKTKVI--WVSTWYDPAKERQAAETLIA- 204 (355)
37778 T ss_dssp ECTHHHHHHHHHHHHHHCSSSEEEEEESCCSHHHHHHHHHHHHHHHTTCTTCEEEEE--ECSCSCCHHHHHHHHHHHHH-
37779 T ss_pred cchHHHHHHHHHHHHHHcCCCcEEEEeCCCchHHHHHHHHHHHHHHHhCCCCEEEEE--EccCCCCHHHHHHHHHHHHH-
37780 Confidence 5665566655555443 356789988743 2344566777877776532 1222111 11001 11122344555553
37781
37782
37783 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLN 298 (908)
37784 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g 298 (908)
37785 .++|+|+...+ +..+++++++.|
37786 T Consensus 205 ~~~d~I~~~~~---a~gv~~a~~~~g 227 (355)
37787 T 6PI6_C 205 QGADVLTQNTN---SPATLQVAQEKG 227 (355)
37788 T ss_dssp TTCCEEEESSS---SSHHHHHHHHTT
37789 T ss_pred CCCCEEEeCCC---CHHHHHHHHHhC
37790 Confidence 47888877653 356677776655
37791
37792
37793 No 312
37794 >6PII_A Atrazine periplasmic binding protein; SAD phasing, periplasmic binding protein; HET: EMC, GUN, PO4; 1.87A {Pseudomonas sp. (strain ADP)}
37795 Probab=94.78 E-value=0.00074 Score=68.92 Aligned_cols=206 Identities=6% Similarity=-0.033 Sum_probs=106.5 Template_Neff=10.200
37796
37797 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSL 117 (908)
37798 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
37799 ......+..+||+++|..... ..+......+++.++++.+ +.+.+.+.+...++ ....
37800 T Consensus 17 ~~~~~~~~~~I~~v~~~~~~d----------~~~~~~~~~g~~~~~~~~g--------~~~~~~~~~~~~~~----~~~~ 74 (355)
37801 T 6PII_A 17 RGSHMQEPLKVAFVYAGPVSD----------AGYTYAHDQGRLAMEKNLG--------AKVKSSYVENVPEG----ADAE 74 (355)
37802 T ss_dssp ---CCCCCEEEEEECSSCGGG----------SSHHHHHHHHHHHHHHHHG--------GGEEEEEECSCCST----HHHH
37803 T ss_pred CCCCCCCCeEEEEEEccCCCc----------cchHHHHHHHHHHHHHHhC--------CCcEEEEEecCCCc----ccHH
37804 Confidence 344566789999999864211 1245667777777777653 33443333322221 1222
37805
37806
37807 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRL-FKIPQISYASTAPELSDNTRYDFFSRVV 196 (908)
37808 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~-~~iP~Is~~~~~~~l~~~~~~~~~~~~~ 196 (908)
37809 +.+++++. .++|+||+...... ..+..++++ .++|+|..+...+ .+++..+.
37810 T Consensus 75 ~~l~~l~~-------------------~~~d~II~~~~~~~-~~~~~~a~~~~~i~~v~~~~~~~-------~~~~~~v~ 127 (355)
37811 T 6PII_A 75 RVIRKLAA-------------------DGNKLIFTTSFGFM-NPTERVAKAFPNVVFEHATGVKL-------AKNLGVYE 127 (355)
37812 T ss_dssp HHHHHHHH-------------------TTCSEEEECSGGGH-HHHHHHHHHCTTSEEEEESCCCC-------BTTEEEEE
37813 T ss_pred HHHHHHHH-------------------CCCCEEEEcChhhH-HHHHHHHHHCCCCEEEEcccCCC-------cCCEEEec
37814 Confidence 33333332 46788876543322 223333433 6899988765432 12344555
37815
37816
37817 Q NP_000836.2 197 PPDSYQAQAMVDIVTA-LGWNYVSTLASE-GNYGESGVEAFTQISREIG-GVCIAQSQKIPREP-RPGEFEKIIKRLLET 272 (908)
37818 Q Consensus 197 ~~~~~~~~~~~~~l~~-~~~~~v~ii~~~-~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~-~~~~~~~~~~~l~~~ 272 (908)
37819 .+....+..++.++.. .+.++|+++... ......+.++|.+.+++.+ .+.+... +.... +.....+.+++++.
37820 T Consensus 128 ~d~~~~g~~ag~~a~~~~~~~~i~~i~~~~~~~~~~~~~gf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll~- 204 (355)
37821 T 6PII_A 128 SRQYEGTYLQGVLAAKMTKTGVIGFVGSFPVPEVIRNINAYTLGAQSVNPKIKTKVI--WVSTWYDPAKERQAAETLIA- 204 (355)
37822 T ss_dssp ECTHHHHHHHHHHHHHHCSSSEEEEEESCCCHHHHHHHHHHHHHHHTTCTTCEEEEE--ECSSSCCHHHHHHHHHHHHH-
37823 T ss_pred cchHHHHHHHHHHHHHHcCCCcEEEEeCCCchHHHHHHHHHHHHHHHhCCCCEEEEE--EccCCCCHHHHHHHHHHHHH-
37824 Confidence 5665566655555443 356789988743 2344566777877776532 1222111 11001 11122344555553
37825
37826
37827 Q NP_000836.2 273 PNARAVIMFANEDDIRRILEAAKKLN 298 (908)
37828 Q Consensus 273 ~~~~viv~~~~~~~~~~~l~~~~~~g 298 (908)
37829 .++|+|+...+ +..+++++++.|
37830 T Consensus 205 ~~~d~I~~~~~---a~gv~~a~~~~g 227 (355)
37831 T 6PII_A 205 QGADVLTQNTN---SPATLQVAQEKG 227 (355)
37832 T ss_dssp TTCCEEEESSS---SSHHHHHHHHTT
37833 T ss_pred CCCCEEEeCCC---CHHHHHHHHHhC
37834 Confidence 47888877653 356677776655
37835
37836
37837 No 313
37838 >6RQG_A 46 kDa surface antigen; immunodominant surface protein Mycoplasma hyopneumoniae; 3.1A {Mycoplasma hyopneumoniae J}
37839 Probab=94.68 E-value=0.00085 Score=68.97 Aligned_cols=92 Identities=14% Similarity=-0.013 Sum_probs=52.0 Template_Neff=8.700
37840
37841 Q NP_000836.2 145 DKISGVIGAAASS-VSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTAL---------- 213 (908)
37842 Q Consensus 145 ~~v~~vIg~~~s~-~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------- 213 (908)
37843 .++|++|...... ........+...++|+|.++...+.. ......+..++...++.+++++.+.
37844 T Consensus 76 ~~~dgIIi~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~-----~~~~~~V~~d~~~~g~~a~~~l~~~~~~~~~~~~~ 150 (387)
37845 T 6RQG_A 76 PAPKGFIIAPENGSGVGTAVNTIADKGIPIVAYDRLITGS-----DKYDWYVSFDNEKVGELQGLSLAAGLLGKEDGAFD 150 (387)
37846 T ss_dssp SCCSCEEECCSSTTTTHHHHHHHHTTTCCEEEESSCCCSC-----CCCCEEEEECHHHHHHHHHHHHHHHHHTCCSSCCS
37847 T ss_pred cCCCEEEEeCCCcccHHHHHHHHHHCCCCEEEEecCCCCC-----CcccEEEEcCHHHHHHHHHHHHHHHhcCCCCCCcc
37848 Confidence 4678777543322 22233445667899999887643310 1234455566666666666665322
37849
37850
37851 Q NP_000836.2 214 ---------------GWNYVSTLAS--EGNYGESGVEAFTQISRE 241 (908)
37852 Q Consensus 214 ---------------~~~~v~ii~~--~~~~~~~~~~~~~~~~~~ 241 (908)
37853 +.++++++.. .+.....+.++|.+.+++
37854 T Consensus 151 ~~~~~~~~~~~~~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~l~~ 195 (387)
37855 T 6RQG_A 151 SIDQMNEYLKSHMPQETISFYTIAGSQDDNNSQYFYNGAMKVLKE 195 (387)
37856 T ss_dssp SHHHHHHHHHHTCCSSCEEEEECBCCTTSHHHHHHHHHHHHHHHH
37857 T ss_pred chHHHhHHHHHhCCCCceEEEEEECCCCChhHHHHHHHHHHHHHH
37858 Confidence 2467777753 223445567777777765
37859
37860
37861 No 314
37862 >6RUX_C Surface antigen P46; immunodominant surface protein Mycoplasma hyopneumoniae; HET: MAL; 2.5A {Mycoplasma hyopneumoniae J}
37863 Probab=94.68 E-value=0.00085 Score=68.97 Aligned_cols=92 Identities=14% Similarity=-0.013 Sum_probs=52.0 Template_Neff=8.700
37864
37865 Q NP_000836.2 145 DKISGVIGAAASS-VSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTAL---------- 213 (908)
37866 Q Consensus 145 ~~v~~vIg~~~s~-~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------- 213 (908)
37867 .++|++|...... ........+...++|+|.++...+.. ......+..++...++.+++++.+.
37868 T Consensus 76 ~~~dgIIi~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~-----~~~~~~V~~d~~~~g~~a~~~l~~~~~~~~~~~~~ 150 (387)
37869 T 6RUX_C 76 PAPKGFIIAPENGSGVGTAVNTIADKGIPIVAYDRLITGS-----DKYDWYVSFDNEKVGELQGLSLAAGLLGKEDGAFD 150 (387)
37870 T ss_dssp SCCSCEEECCSSTTTTHHHHHHHHTTTCCEEEESSCCCSC-----SCCCEEEEECHHHHHHHHHHHHHHHHTTCCSSCCS
37871 T ss_pred cCCCEEEEeCCCcccHHHHHHHHHHCCCCEEEEecCCCCC-----CcccEEEEcCHHHHHHHHHHHHHHHhcCCCCCCcc
37872 Confidence 4678777543322 22233445667899999887643310 1234455566666666666665322
37873
37874
37875 Q NP_000836.2 214 ---------------GWNYVSTLAS--EGNYGESGVEAFTQISRE 241 (908)
37876 Q Consensus 214 ---------------~~~~v~ii~~--~~~~~~~~~~~~~~~~~~ 241 (908)
37877 +.++++++.. .+.....+.++|.+.+++
37878 T Consensus 151 ~~~~~~~~~~~~~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~l~~ 195 (387)
37879 T 6RUX_C 151 SIDQMNEYLKSHMPQETISFYTIAGSQDDNNSQYFYNGAMKVLKE 195 (387)
37880 T ss_dssp SHHHHHHHHHHTCCSSCEEEEECBCCTTSHHHHHHHHHHHHHHHH
37881 T ss_pred chHHHhHHHHHhCCCCceEEEEEECCCCChhHHHHHHHHHHHHHH
37882 Confidence 2467777753 223445567777777765
37883
37884
37885 No 315
37886 >6S3T_T 46 kDa surface antigen, Immunoglobulin; immunodominant surface protein Mycoplasma hyopneumoniae; HET: XYP; 3.5A {Mycoplasma hyopneumoniae J}
37887 Probab=94.68 E-value=0.00085 Score=68.97 Aligned_cols=92 Identities=14% Similarity=-0.013 Sum_probs=52.0 Template_Neff=8.700
37888
37889 Q NP_000836.2 145 DKISGVIGAAASS-VSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTAL---------- 213 (908)
37890 Q Consensus 145 ~~v~~vIg~~~s~-~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------- 213 (908)
37891 .++|++|...... ........+...++|+|.++...+.. ......+..++...++.+++++.+.
37892 T Consensus 76 ~~~dgIIi~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~-----~~~~~~V~~d~~~~g~~a~~~l~~~~~~~~~~~~~ 150 (387)
37893 T 6S3T_T 76 PAPKGFIIAPENGSGVGTAVNTIADKGIPIVAYDRLITGS-----DKYDWYVSFDNEKVGELQGLSLAAGLLGKEDGAFD 150 (387)
37894 T ss_dssp SCCSCEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCCSC-----CCCCEEEEECHHHHHHHHHHHHHHHHTTCCSSCCS
37895 T ss_pred cCCCEEEEeCCCcccHHHHHHHHHHCCCCEEEEecCCCCC-----CcccEEEEcCHHHHHHHHHHHHHHHhcCCCCCCcc
37896 Confidence 4678777543322 22233445667899999887643310 1234455566666666666665322
37897
37898
37899 Q NP_000836.2 214 ---------------GWNYVSTLAS--EGNYGESGVEAFTQISRE 241 (908)
37900 Q Consensus 214 ---------------~~~~v~ii~~--~~~~~~~~~~~~~~~~~~ 241 (908)
37901 +.++++++.. .+.....+.++|.+.+++
37902 T Consensus 151 ~~~~~~~~~~~~~~~g~~~i~~i~~~~~~~~~~~r~~g~~~~l~~ 195 (387)
37903 T 6S3T_T 151 SIDQMNEYLKSHMPQETISFYTIAGSQDDNNSQYFYNGAMKVLKE 195 (387)
37904 T ss_dssp CHHHHHHHHHHSCCSSCEEEEECBCCTTSTHHHHHHHHHHHHHHH
37905 T ss_pred chHHHhHHHHHhCCCCceEEEEEECCCCChhHHHHHHHHHHHHHH
37906 Confidence 2467777753 223445567777777765
37907
37908
37909 No 316
37910 >4FE4_A Xylose operon regulatory protein; dauixie, d-xylose, XylR, DNA looping; 3.45A {Escherichia coli}
37911 Probab=94.62 E-value=0.00092 Score=69.19 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=82.2 Template_Neff=11.500
37912
37913 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASE 224 (908)
37914 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~ 224 (908)
37915 .++|++|.+..+ ......++..++|+|..+...+... ..+....+..++...++.+++++.+.+.++++++...
37916 T Consensus 55 ~~~dgiI~~~~~---~~~~~~~~~~~ipvv~~~~~~~~~~---~~~~~~~v~~d~~~~g~~~~~~l~~~g~~~i~~i~~~ 128 (392)
37917 T 4FE4_A 55 WLGDGVIADFDD---KQIEQALADVDVPIVGVGGSYHLAE---SYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLP 128 (392)
37918 T ss_dssp CCCSEEEEETTS---HHHHTTSTTCCSCEEEECBCCSSGG---GCCSSEECEECHHHHHHHHHHHHHHHSCCCEEEECCC
37919 T ss_pred hcCCEEEEeCCC---HHHHHHHhcCCCCEEEecCCccccC---CCCCCeEEEeCHHHHHHHHHHHHHHcCCCeEEEeCCc
37920 Confidence 467777765322 2233445667999998776432100 1234456667777778888888866678889988753
37921
37922
37923 Q NP_000836.2 225 GN----YGESGVEAFTQISREIGGVCIAQSQKI-PREPRPGEFEKIIKRLLE-TPNARAVIMFANEDDIRRILEAAKKLN 298 (908)
37924 Q Consensus 225 ~~----~~~~~~~~~~~~~~~~~~i~v~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~viv~~~~~~~~~~~l~~~~~~g 298 (908)
37925 .. ....+.++|.+.+++. +......... ....+..+....++++++ ..++|+|++.. +..+..+++++.+.|
37926 T Consensus 129 ~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ii~~~-d~~a~~~~~al~~~g 206 (392)
37927 T 4FE4_A 129 ESSGKRWATEREYAFRQLVAEE-KYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVT-DARARHILQVCEHLH 206 (392)
37928 T ss_dssp TTSSCCHHHHHHHHHHHHHTTS-SSCEEEECCCCSSCSSHHHHHHHHHHHHHHSCSSEEEEESS-TTHHHHHHHHHHHTT
37929 T ss_pred hhhcchHHHHHHHHHHHHHHhh-ccceeecCCCCCCCccHHHHHHHHHHHHHcCCCCcEEEEeC-cHHHHHHHHHHHHcC
37930 Confidence 32 3456677888877654 2221111000 000111122334444432 12467776654 445667778888777
37931
37932
37933 Q NP_000836.2 299 QS 300 (908)
37934 Q Consensus 299 ~~ 300 (908)
37935 +.
37936 T Consensus 207 ~~ 208 (392)
37937 T 4FE4_A 207 IP 208 (392)
37938 T ss_dssp CC
37939 T ss_pred CC
37940 Confidence 64
37941
37942
37943 No 317
37944 >4FE7_A Xylose operon regulatory protein; HTH_ARAC, Helix-turn-helix, PBP, periplasmic binding; HET: XYS; 2.9A {Escherichia coli}
37945 Probab=94.42 E-value=0.0012 Score=68.89 Aligned_cols=205 Identities=12% Similarity=0.051 Sum_probs=108.3 Template_Neff=11.100
37946
37947 Q NP_000836.2 38 HSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSL 117 (908)
37948 Q Consensus 38 ~~~~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~ 117 (908)
37949 ......+..+||++.|. .. .+...+..+++.++++.+ +.+.+ .+.. +. ..
37950 T Consensus 18 ~~~~~~~~~~I~v~~~~-~~------------~~~~~~~~g~~~~a~~~g--------~~~~~--~~~~-~~----~~-- 67 (412)
37951 T 4FE7_A 18 GSHMFTKRHRITLLFNA-NK------------AYDRQVVEGVGEYLQASQ--------SEWDI--FIEE-DF----RA-- 67 (412)
37952 T ss_dssp ---CCCCCEEEEEECCT-TS------------HHHHHHHHHHHHHHHHHT--------CCEEE--EECC--C----C---
37953 T ss_pred CCCcCCCceEEEEEEeC-Cc------------HHHHHHHHHHHHHHHHcC--------CCcEE--Eeec-ch----Hh--
37954 Confidence 34556678999999986 21 255667778777776643 22222 2221 11 11
37955
37956
37957 Q NP_000836.2 118 TFVQALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVP 197 (908)
37958 Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~ 197 (908)
37959 .++.+.. ..+|++|.+... ......+...++|+|..+...+.. ...+....+..
37960 T Consensus 68 -~~~~~~~-------------------~~~dgiI~~~~~---~~~~~~~~~~~ipvv~~~~~~~~~---~~~~~~~~v~~ 121 (412)
37961 T 4FE7_A 68 -RIDKIKD-------------------WLGDGVIADFDD---KQIEQALADVDVPIVGVGGSYHLA---ESYPPVHYIAT 121 (412)
37962 T ss_dssp ---------------------------CCCSEEEEETTC---HHHHHHHTTCCSCEEEEEECCSSG---GGSCSSEEEEE
37963 T ss_pred -hHHHHHh-------------------hCCCEEEEeCCC---HHHHHHHhcCCCCEEEecCCcccc---CCCCCCcEEEe
37964 Confidence 1222211 456777765322 223344566799999887643210 01233455667
37965
37966
37967 Q NP_000836.2 198 PDSYQAQAMVDIVTALGWNYVSTLASEG----NYGESGVEAFTQISREIGGVCIAQSQK-IPREPRPGEFEKIIKRLLE- 271 (908)
37968 Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~v~ii~~~~----~~~~~~~~~~~~~~~~~~~i~v~~~~~-~~~~~~~~~~~~~~~~l~~- 271 (908)
37969 ++...++.+++++.+.+.++++++.... .....+.++|++.+++. +........ .....+..+....++++++
37970 T Consensus 122 d~~~~g~~a~~~l~~~g~~~i~~i~~~~~~~~~~~~~r~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 200 (412)
37971 T 4FE7_A 122 DNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEE-KYRGVVYQGLETAPENWQHAQNRLADWLQT 200 (412)
37972 T ss_dssp CHHHHHHHHHHHHHHTTCCEEEEECCCTTSCCHHHHHHHHHHHHHHTTS-SSCCEEECCSCSSCSSHHHHHHHHHHHHHH
37973 T ss_pred CHHHHHHHHHHHHHHcCCCeEEEecCCcccccchHHHHHHHHHHHHhhc-CceeeeecCcccCCccHHHHHHHHHHHHHc
37974 Confidence 7777788888888666778898887432 23556677888877764 232111100 0000111122334444432
37975
37976
37977 Q NP_000836.2 272 TPNARAVIMFANEDDIRRILEAAKKLNQS 300 (908)
37978 Q Consensus 272 ~~~~~viv~~~~~~~~~~~l~~~~~~g~~ 300 (908)
37979 ..++++|++.. +..+..+++++.+.|+.
37980 T Consensus 201 ~~~~~~ii~~~-d~~a~~~~~al~~~g~~ 228 (412)
37981 T 4FE7_A 201 LPPQTGIIAVT-DARARHILQVCEHLHIP 228 (412)
37982 T ss_dssp SCTTEEEEESS-HHHHHHHHHHHHHHTCC
37983 T ss_pred CCCCeEEEEeC-cHHHHHHHHHHHHCCCC
37984 Confidence 12467776653 44556777788777764
37985
37986
37987 No 318
37988 >2HQB_A Transcriptional activator of comK gene; Berkeley Structure Genomics Center Target; 2.7A {Bacillus halodurans}
37989 Probab=93.50 E-value=0.0031 Score=61.96 Aligned_cols=140 Identities=9% Similarity=-0.001 Sum_probs=72.1 Template_Neff=11.200
37990
37991 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANILRL-FKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVT-ALGWNYVSTLA 222 (908)
37992 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~~~-~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~v~ii~ 222 (908)
37993 .++|+||....... .....+++. .++|+|..+...+ .+.+..+..+....+..++.++. ..+.++|+++.
37994 T Consensus 62 ~~~d~Ii~~~~~~~-~~~~~~a~~~~~i~~v~~~~~~~-------~~~~~~v~~d~~~~~~~a~~~~~~~~~~~~i~~i~ 133 (296)
37995 T 2HQB_A 62 GGVNLIFGHGHAFA-EYFSTIHNQYPDVHFVSFNGEVK-------GENITSLHFEGYAMGYFGGMVAASMSETHKVGVIA 133 (296)
37996 T ss_dssp TTCCEEEECSTHHH-HHHHTTTTSCTTSEEEEESCCCC-------SSSEEEEEECCHHHHHHHHHHHHHTCSSSEEEEEE
37997 T ss_pred CCCCEEEEeCHHHH-HHHHHHHHHCCCcEEEEecCCcC-------CCCEEEEEechhHHHHHHHHHHHHhcCCCcEEEEe
37998 Confidence 47888876543322 223333332 6899988765432 13344555555556666666654 45678899887
37999
38000
38001 Q NP_000836.2 223 SEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPR-PGEFEKIIKRLLETPNARAVIMFANEDDIRRILEAAKKLN 298 (908)
38002 Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~viv~~~~~~~~~~~l~~~~~~g 298 (908)
38003 .... ..+.++|.+.+++.+...+.. .+..... .......++++.. .++|+|+... +..+..+++++++.|
38004 T Consensus 134 ~~~~--~~~~~gf~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~-~~~d~i~~~~-~~~~~~~~~a~~~~g 204 (296)
38005 T 2HQB_A 134 AFPW--QPEVEGFVDGAKYMNESEAFV--RYVGEWTDADKALELFQELQK-EQVDVFYPAG-DGYHVPVVEAIKDQG 204 (296)
38006 T ss_dssp SCTT--CHHHHHHHHHHHHTTCCEEEE--EECSSSSCHHHHHHHHHHHHT-TTCCEEECCC-TTTHHHHHHHHHHHT
38007 T ss_pred cCCC--chHHHHHHHHHHHhCCCceEE--EEeCCCCCHHHHHHHHHHHHH-CCCCEEEEcC-CcccHHHHHHHHHcC
38008 Confidence 5432 235667776665432111110 0110011 1122334444443 4678877653 444556677776655
38009
38010
38011 No 319
38012 >6SHU_A Basic membrane protein D; transporter, nucleoside, purine, TRANSPORT PROTEIN; HET: ADN; 1.43002869382A {Borrelia burgdorferi (strain JD1)}
38013 Probab=93.26 E-value=0.0039 Score=63.47 Aligned_cols=205 Identities=10% Similarity=-0.043 Sum_probs=106.0 Template_Neff=10.300
38014
38015 Q NP_000836.2 41 RVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV 120 (908)
38016 Q Consensus 41 ~~~~~i~Ig~l~p~~~~~~~~~~c~~~~~~~~~~~~~a~~~A~~~iN~~~~il~g~~l~~~~~d~~~~~~~a~~~~~~~~ 120 (908)
38017 ......+||++.|..... ..+......+++.+.++.| +++ ...+. ++ ....+.+
38018 T Consensus 43 ~~~~~~~I~~i~~~~~~d----------~~~~~~~~~g~~~~~~~~g--------~~~--~~~~~--~~----~~~~~~l 96 (361)
38019 T 6SHU_A 43 GKSEAKTVSLIVDGAFDD----------KGFNESSSKAIRKLKADLN--------INI--IEKAS--TG----NSYLGDI 96 (361)
38020 T ss_dssp -CCTTCEEEEEEESCSCS----------SSHHHHHHHHHHHHHHHHC--------CEE--EEEEE--CG----GGHHHHH
38021 T ss_pred CCcCCcEEEEEECCCCCC----------CchHHHHHHHHHHHHHHhC--------CeE--EEcCC--Cc----cchHHHH
38022 Confidence 445678999999853211 1245567777777776653 222 22221 11 1222333
38023
38024
38025 Q NP_000836.2 121 QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRL-FKIPQISYASTAPELSDNTRYDFFSRVVPPD 199 (908)
38026 Q Consensus 121 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~vIg~~~s~~~~~va~~~~~-~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~ 199 (908)
38027 +++.. .++|+||+..... ...+..+++. .++|++.++...+... ..+++..+..+.
38028 T Consensus 97 ~~l~~-------------------~~~d~II~~~~~~-~~~~~~~a~~~~~i~~v~~~~~~~~~~---~~~~~~~v~~d~ 153 (361)
38029 T 6SHU_A 97 ANLED-------------------GNSNLIWGIGFRL-SDILFQRASENVSVNYAIIEGVYDEIQ---IPKNLLNISFRS 153 (361)
38030 T ss_dssp HHHHH-------------------TTCSEEEEESGGG-HHHHHHHHHHCTTSCEEEESCCCSSCC---CCTTEEEEEECH
38031 T ss_pred HHHHh-------------------CCCCEEEEeChhh-HHHHHHHHHhCCCCcEEEeecCCcccc---CcCCEEEEEeCH
38032 Confidence 43332 4788888653322 2223333332 6899888776432100 123455566666
38033
38034
38035 Q NP_000836.2 200 SYQAQAMVDIVTA-LGWNYVSTLASE-GNYGESGVEAFTQISREIG-GVCIAQSQKIPREP-RPGEFEKIIKRLLETPNA 275 (908)
38036 Q Consensus 200 ~~~~~~~~~~l~~-~~~~~v~ii~~~-~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~-~~~~~~~~~~~l~~~~~~ 275 (908)
38037 ...+..++.++.. .+.++|+++... ......+.++|.+.+++.+ .+.+... +..+. +.....+.++++.. .++
38038 T Consensus 154 ~~~~~lag~~~~~~~~~~~ig~i~~~~~~~~~~~~~gf~~~~~~~~~~~~~~~~--~~~~~~d~~~a~~~~~~~~~-~~~ 230 (361)
38039 T 6SHU_A 154 EEVAFLAGYFASKASKTGKIGFVGGVRGKVLESFMYGYEAGAKYANSNIKVVSQ--YVGTFGDFGLGRSTASNMYR-DGV 230 (361)
38040 T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEESSCSHHHHHHHHHHHHHHHHHCTTCEEEEE--ECSSSSCHHHHHHHHHHHHH-TTC
38041 T ss_pred HHHHHHHHHHHHHHcCCCeEEEEeCCCChHHHHHHHHHHHHHHHHCcCCEEEEE--ECCCCCChHHHHHHHHHHHH-cCC
38042 Confidence 6666666666544 456789998743 2344556677777765532 1222111 11001 11123344555553 478
38043
38044
38045 Q NP_000836.2 276 RAVIMFANEDDIRRILEAAKKLN 298 (908)
38046 Q Consensus 276 ~viv~~~~~~~~~~~l~~~~~~g 298 (908)
38047 |+|+... +..+..+++++++.|
38048 T Consensus 231 d~I~~~~-~~~~~g~~~a~~~~g 252 (361)
38049 T 6SHU_A 231 DIIFAAA-GLSGIGVIEAAKELG 252 (361)
38050 T ss_dssp CEEEEES-THHHHHHHHHHHHHC
38051 T ss_pred CEEEECC-chHHHHHHHHHHHHC
38052 Confidence 8887764 345566777777765
38053
38054
38055 No 320
38056 >4P98_A Basic membrane lipoprotein; Structural Genomics, PSI-Biology, Midwest Center; HET: MLY, MLZ, BR; 1.9A {Conexibacter woesei}
38057 Probab=91.79 E-value=0.01 Score=58.80 Aligned_cols=133 Identities=5% Similarity=-0.089 Sum_probs=64.4 Template_Neff=11.000
38058
38059 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANILR-LFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTA-LGWNYVSTLA 222 (908)
38060 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~~-~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~v~ii~ 222 (908)
38061 +++|+||+...... .....+.+ ..++|++..+...+... ..+++..+..+....+..+..++.. .+.++|+++.
38062 T Consensus 74 ~~~d~Ii~~~~~~~-~~~~~~~~~~~~i~~v~~~~~~~~~~---~~~~~~~v~~~~~~~~~~ag~~~~~~~~~~~i~~i~ 149 (317)
38063 T 4P98_A 74 RGFDLVVGHGIDVS-EPILRVATEFPDVHFSASGDATLAER---LPPNVDGWTYDFGQLGYLDGFVAGSLRGVEKVGAVG 149 (317)
38064 T ss_dssp TTCSEEEEESHHHH-HHHHHHHTTCTTSEEEEECCGGGGGG---CCTTEEEEEECHHHHHHHHHHHHHTSSSCCEEEEEE
38065 T ss_pred CCCCEEEEeCHHhH-HHHHHHHHHCCCCEEEEccCcchhcc---CCCCeEEEEeehHHHHHHHHHHHHHHcCCCcEEEEe
38066 Confidence 57888886543321 22222222 35899887665332100 0234444555555455555544432 3567899987
38067
38068
38069 Q NP_000836.2 223 SE-GNYGESGVEAFTQISREIG-GVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFAN 283 (908)
38070 Q Consensus 223 ~~-~~~~~~~~~~~~~~~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~viv~~~~ 283 (908)
38071 .. ......+.++|.+.+++.+ .+.+........ .+.....+.++++++ .++|+|+...+
38072 T Consensus 150 ~~~~~~~~~~~~gf~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~l~~-~~~d~i~~~~~ 210 (317)
38073 T 4P98_A 150 GPQLPFVLATHKGIRAGLKAANPRASYEETYTGRF-YDLQKEQEAARGLLD-KGAQLLVATDD 210 (317)
38074 T ss_dssp SSCCHHHHHHHHHHHHHHHHHCTTCEEEEEECSSS-SCHHHHHHHHHHHHH-TTCSSEEESSC
38075 T ss_pred CCCChHHHHHHHHHHHHHHHHCCCCEEEEEEccCC-CCHHHHHHHHHHHHH-CCCCEEEECCC
38076 Confidence 43 2234456677777776531 122221110000 011223345555553 47888777643
38077
38078
38079 No 321
38080 >4PEV_C solute binding protein; Structural Genomics, PSI-Biology, Midwest Center; HET: ADN, MSE; 2.58A {Aeropyrum pernix}
38081 Probab=90.15 E-value=0.022 Score=58.94 Aligned_cols=145 Identities=11% Similarity=-0.042 Sum_probs=70.8 Template_Neff=9.100
38082
38083 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANIL-RLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAM----VDIVTA-----LG 214 (908)
38084 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~-~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~-----~~ 214 (908)
38085 .++|+||....... .....++ ...++|++..+...+. ..+++..+..+....+..+ +.++.+ .+
38086 T Consensus 110 ~g~D~II~~~~~~~-~~~~~~a~~~~~i~fv~~~~~~~~-----~~~nv~~v~~d~~~~g~laG~~aa~~~~~~~~~~~g 183 (422)
38087 T 4PEV_C 110 GEYDLIVLVGFLWQ-EPLEKVAPRYPEQKYALIDAATRE-----RYDNVASYLFREQEVASLVGIIAADIANNISKATGE 183 (422)
38088 T ss_dssp CCCSEEEEESGGGH-HHHHHHHHHCTTSEEEEESBCCSS-----CCTTEEEEEECHHHHHHHHHHHHHHHHHHHHHHHSS
38089 T ss_pred CCCCEEEEeCcccH-HHHHHHHHHCCCCeEEEEeCCCcc-----CCCCEEEEEECHHHHHHHHHHHHHHHHhhHhhhhCC
38090 Confidence 47888886543322 1122222 2468998877654321 0123334444444433333 333321 24
38091
38092
38093 Q NP_000836.2 215 WNYVSTLASE-GNYGESGVEAFTQISREIG-----GVCIAQSQKIPREP-RPGEFEKIIKRLLETPNARAVIMFANEDDI 287 (908)
38094 Q Consensus 215 ~~~v~ii~~~-~~~~~~~~~~~~~~~~~~~-----~i~v~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~viv~~~~~~~~ 287 (908)
38095 .++|++|... ......+.++|.+.+++.+ .+.+... +.... +.......++++.. .++|+|+... +...
38096 T Consensus 184 ~~~Ig~i~g~~~~~~~~~~~gf~~g~~~~~~~~~~~~~v~~~--~~~~~~d~~~a~~~a~~ll~-~g~dvI~~~~-~~~a 259 (422)
38097 T 4PEV_C 184 EAKAGAVAGMDIPPLWRFHIGYLYGVQYYNQAMGTDVEMVWT--YTGRFDDPTLGKTTAEQMLQ-QGVRVFYGVA-GLTH 259 (422)
38098 T ss_dssp CCEEEEEECCCSHHHHHHHHHHHHHHHHHHHTTTCCCCEEEE--ECSCSSCHHHHHHHHHHHHH-TTEEEEEEES-TTHH
38099 T ss_pred CCEEEEEECCCChHHHHHHHHHHHHHHHHCHhcCCCCEEEEE--EecCCCChHHHHHHHHHHHH-CCCCEEEEcc-chhh
38100 Confidence 6789888743 2334456667777665531 1122111 11001 11122344555553 4788877664 4445
38101
38102
38103 Q NP_000836.2 288 RRILEAAKKLNQ 299 (908)
38104 Q Consensus 288 ~~~l~~~~~~g~ 299 (908)
38105 ..+++++++.++
38106 T Consensus 260 ~gv~~a~~~~g~ 271 (422)
38107 T 4PEV_C 260 VGMFNAVKEAAA 271 (422)
38108 T ss_dssp HHHHHHHHHHHH
38109 T ss_pred HHHHHHHHHHHH
38110 Confidence 667777777765
38111
38112
38113 No 322
38114 >5ER3_A Sugar ABC transporter, periplasmic sugar-binding; Structural Genomics, PSI-Biology, Midwest Center; HET: GOL, MSE; 2.105A {Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1)}
38115 Probab=89.00 E-value=0.032 Score=55.66 Aligned_cols=91 Identities=11% Similarity=-0.005 Sum_probs=54.2 Template_Neff=10.900
38116
38117 Q NP_000836.2 145 DKISGVIGAAASSV-SIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTALG--WNYVSTL 221 (908)
38118 Q Consensus 145 ~~v~~vIg~~~s~~-~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~v~ii 221 (908)
38119 .++|++|....... .......+. .++|+|..+...+. ......+..++...++.+++++.+.+ .++++++
38120 T Consensus 237 ~~~dgii~~~~~~~~~~~~~~~~~-~~ipvv~~~~~~~~------~~~~~~v~~d~~~~g~~aa~~l~~~~~~~~~i~~i 309 (341)
38121 T 5ER3_A 237 AKVDGIAISPIDPENQVAMINDAC-KVTPVICQDSDAPA------SRRKFYLGTSNYLAGRAAGKLIQEAIPEGGEVMLF 309 (341)
38122 T ss_dssp TTCSEEEECCSSGGGCHHHHHHHH-TTSCEEEESSCCTT------SCCSCEEECCHHHHHHHHHHHHHHHCTTCEEEEEE
38123 T ss_pred CCCCEEEECCCCHHHHHHHHHHHh-hCCCEEEEcCCCCc------ccCcEEEeCCHHHHHHHHHHHHHHHCCCCcEEEEE
38124 Confidence 46787775433322 122233445 68999987754321 12345566777777888888875543 3788888
38125
38126
38127 Q NP_000836.2 222 ASEG--NYGESGVEAFTQISREI 242 (908)
38128 Q Consensus 222 ~~~~--~~~~~~~~~~~~~~~~~ 242 (908)
38129 .... .....+.++|++.+++.
38130 T Consensus 310 ~~~~~~~~~~~r~~g~~~~l~~~ 332 (341)
38131 T 5ER3_A 310 VGKMEVLNAQERSQGIMDELAGK 332 (341)
38132 T ss_dssp ESCTTSHHHHHHHHHHHHHHTTC
38133 T ss_pred ECCCCChhHHHHHHHHHHHHhcC
38134 Confidence 7432 23445667777777664
38135
38136
38137 No 323
38138 >3QI7_A Putative transcriptional regulator; PERIPLASMIC BINDING PROTEIN-LIKE, STRUCTURAL GENOMICS; 1.86A {Clostridium difficile}
38139 Probab=87.09 E-value=0.055 Score=54.67 Aligned_cols=152 Identities=12% Similarity=0.065 Sum_probs=79.5 Template_Neff=9.900
38140
38141 Q NP_000836.2 145 DKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASE 224 (908)
38142 Q Consensus 145 ~~v~~vIg~~~s~~~~~va~~~~~~~iP~Is~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~ii~~~ 224 (908)
38143 .++++++..............+...++|+|......+....-........+..++...++.+++++.+.+.++++++...
38144 T Consensus 86 ~~~d~ii~~~~~~~~~~~i~~~~~~gi~~iii~~~~~~~~~v~~~~~~~~V~~D~~~~g~~a~~~l~~~g~~~i~~i~~~ 165 (371)
38145 T 3QI7_A 86 KEVQAIVVSTDQAGLLPALQKVKEKRPEIITISAPMGDDKNQLSQFVDVNLGVSAEERGKVLAERSKEMGAKAFIHYAST 165 (371)
38146 T ss_dssp TTEEEEEEECSSCCCHHHHHHHHHHCTTSEEEESSCCSCHHHHHHHSSEEEECCHHHHHHHHHHHHHHTTCSCEEEEEET
38147 T ss_pred CCCcEEEEeCCCCchHHHHHHHHHhCCCEEEEeCCCCCChhHHcccccEEEECChHHHHHHHHHHHHHCCCCEEEEEeCC
38148 Confidence 46777775433322223334456678998877654321000000002344566666777778888766677788888743
38149
38150
38151 Q NP_000836.2 225 GN----YGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLL---------ETPNARAVIMFANEDDIRRIL 291 (908)
38152 Q Consensus 225 ~~----~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~l~---------~~~~~~viv~~~~~~~~~~~l 291 (908)
38153 .. ....+.++|++.+++. ++.+....... .........+++++ ...++++|+.. ++..+..++
38154 T Consensus 166 ~~~~~~~~~~R~~gf~~~l~~~-gi~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ai~~~-~d~~a~g~~ 241 (371)
38155 T 3QI7_A 166 DDLKDVNIAKRLEMIKETCKNI-GLPFVQVNTPN--INTEEDKNKVKQFLNEDIEKQVKKYGKDINVFGV-NEYMDEVIL 241 (371)
38156 T ss_dssp TGGGSHHHHHHHHHHHHHHHHT-TCCEEEEEECC--CSSTHHHHHHHHHHHHHHHHHHHHHCSCCEEEES-SHHHHHHHH
38157 T ss_pred ccccchhHHHHHHHHHHHHHHc-CCCeeeeecCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCcEEEEEc-ChhhHHHHH
38158 Confidence 22 2456778888888875 35433211101 11111111222221 11346666654 344567788
38159
38160
38161 Q NP_000836.2 292 EAAKKLNQS 300 (908)
38162 Q Consensus 292 ~~~~~~g~~ 300 (908)
38163 +++++.|..
38164 T Consensus 242 ~al~~~g~~ 250 (371)
38165 T 3QI7_A 242 TKALELKYI 250 (371)
38166 T ss_dssp HHHHHHCCB
38167 T ss_pred HHHHHCCCE
38168 Confidence 888877763
38169
38170
38171 No 324
38172 >6U1N_R Muscarinic acetylcholine receptor M2,Vasopressin V2; Arrestin, GPCR, complex, signaling, SIGNALING; HET: SEP, 2CU, TPO;{Homo sapiens}
38173 Probab=78.82 E-value=0.23 Score=52.20 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=18.4 Template_Neff=11.800
38174
38175 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
38176 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
38177 ....|.+..++..+.+...+-.+++= .-|.+.+.
38178 T Consensus 99 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~Ry~~i~ 133 (509)
38179 T 6U1N_R 99 GPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVT 133 (509)
38180 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHH
38181 T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
38182 Confidence 36788888777665554443333333 33444443
38183
38184
38185 No 325
38186 >2Z73_A Rhodopsin; Visual pigment, Gq-type, G-Protein Coupled; HET: PLM, TWT, PC1, BOG, RET; 2.5A {Todarodes pacificus}
38187 Probab=72.81 E-value=0.44 Score=48.80 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=16.8 Template_Neff=11.900
38188
38189 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38190 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38191 ...|.+..++..+++....-.+++ =..|...+.
38192 T Consensus 105 ~~~c~~~~~~~~~~~~~s~~~~~~isi~R~~ai~ 138 (448)
38193 T 2Z73_A 105 FAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG 138 (448)
38194 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
38195 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
38196 Confidence 567887776665544433333332 234544443
38197
38198
38199 No 326
38200 >3AYN_A Rhodopsin; transmembrane protein, Photoreceptor, Chromophore, Glycoprotein; HET: PC1, PLM, BOG, RET; 2.7A {Todarodes pacificus}
38201 Probab=72.81 E-value=0.44 Score=48.80 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=16.8 Template_Neff=11.900
38202
38203 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38204 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38205 ...|.+..++..+++....-.+++ =..|...+.
38206 T Consensus 105 ~~~c~~~~~~~~~~~~~s~~~~~~isi~R~~ai~ 138 (448)
38207 T 3AYN_A 105 FAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG 138 (448)
38208 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
38209 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
38210 Confidence 567887776665544433333332 234544443
38211
38212
38213 No 327
38214 >6P9X_R Guanine nucleotide-binding protein G(s) subunit; GPCR, MEMBRANE PROTEIN;{Homo sapiens}
38215 Probab=69.60 E-value=0.58 Score=47.67 Aligned_cols=27 Identities=4% Similarity=0.007 Sum_probs=16.5 Template_Neff=10.700
38216
38217 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTKT 670 (908)
38218 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K~ 670 (908)
38219 ....|.+..++..++....+..+++-.
38220 T Consensus 177 ~~~~C~~~~~~~~~~~~~s~~~l~~ia 203 (427)
38221 T 6P9X_R 177 NVGWCRLVTAAYNYFHVTNFFWMFGEG 203 (427)
38222 T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTH
38223 T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHH
38224 Confidence 457788877776655555555444443
38225
38226
38227 No 328
38228 >5X33_A LTB4 receptor,Lysozyme,LTB4 receptor (E.C.3.2.1.17); helix, MEMBRANE PROTEIN; HET: 7Y9; 3.7A {Cavia porcellus}
38229 Probab=69.09 E-value=0.61 Score=48.96 Aligned_cols=18 Identities=17% Similarity=0.259 Sum_probs=11.4 Template_Neff=11.500
38230
38231 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
38232 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
38233 ....|.+..++..+.+..
38234 T Consensus 87 ~~~~C~~~~~~~~~~~~~ 104 (523)
38235 T 5X33_A 87 GLAGCRLCHYICGVSMYA 104 (523)
38236 T ss_pred chHHHHHHHHHHHHHHHH
38237 Confidence 367788877766554443
38238
38239
38240 No 329
38241 >5XSZ_A Lysophosphatidic acid receptor 6a,Endolysin,receptor (E.C.3.2.1.17); alpha helical, membrane protein; HET: OLC; 3.2A {Danio rerio}
38242 Probab=67.40 E-value=0.7 Score=47.60 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=17.1 Template_Neff=12.000
38243
38244 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAA-LLTKTNRIHRIF 677 (908)
38245 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~-l~~K~~ri~~if 677 (908)
38246 ....|.+..++..+......-. ++.=..|.+.+.
38247 T Consensus 96 ~~~~C~~~~~~~~~~~~~s~~~~~~iaidRy~ai~ 130 (477)
38248 T 5XSZ_A 96 GSLLCKLSVSLFYTNMYGSILFLTCISVDRFLAIV 130 (477)
38249 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38250 T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38251 Confidence 3678888777665444332222 222334544444
38252
38253
38254 No 330
38255 >4PXZ_A P2Y purinoceptor 12, Soluble cytochrome; purinergic receptor P2Y12, agonist-bound, G-protein; HET: CLR, 6AD, OLC; 2.5A {Homo sapiens, Escherichia coli, Homo sapiens}
38256 Probab=67.15 E-value=0.71 Score=47.32 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=17.4 Template_Neff=12.100
38257
38258 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38259 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38260 ....|.+..++..+++....-.+++ =..|.+.+.
38261 T Consensus 102 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 136 (466)
38262 T 4PXZ_A 102 RTFVCQVTSVIFYFTMYISISFLGLITIDRYQKTT 136 (466)
38263 T ss_dssp HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
38264 T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38265 Confidence 3567888777665544433333333 233444443
38266
38267
38268 No 331
38269 >6IGK_A Endothelin receptor type B,Endolysin,Endothelin receptor; alpha helical, SIGNALING PROTEIN-PROTEIN BINDING; HET: CIT, OLC; 2.0A {Homo sapiens}
38270 Probab=65.67 E-value=0.8 Score=47.49 Aligned_cols=34 Identities=9% Similarity=0.173 Sum_probs=17.5 Template_Neff=11.900
38271
38272 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALL-TKTNRIHRIF 677 (908)
38273 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~-~K~~ri~~if 677 (908)
38274 ....|.+..++..+.+....-.++ .=..|.+.+.
38275 T Consensus 108 ~~~~C~~~~~~~~~~~~~s~~~~~~iaidR~~ai~ 142 (498)
38276 T 6IGK_A 108 GAEMCKLVPFIQKASVGITVLSLCALSIDRYRAVA 142 (498)
38277 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38278 T ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38279 Confidence 356788877766554443333332 2334544443
38280
38281
38282 No 332
38283 >3ODU_A C-X-C chemokine receptor type 4; Structural Genomics, PSI-2, Protein Structure; HET: OLC, OLA, ITD; 2.5A {Homo Sapiens, Enterobacteria phage T4}
38284 Probab=65.54 E-value=0.8 Score=47.55 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=18.7 Template_Neff=11.800
38285
38286 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAAL-LTKTNRIHRIF 677 (908)
38287 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l-~~K~~ri~~if 677 (908)
38288 ....|.+..++..+++....-.+ +.=.-|.+.+.
38289 T Consensus 115 ~~~~C~~~~~~~~~~~~~s~~~~~~iaidRy~~i~ 149 (502)
38290 T 3ODU_A 115 GNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIV 149 (502)
38291 T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38292 Confidence 46789888877665544333333 33334554444
38293
38294
38295 No 333
38296 >5T04_A Neurotensin receptor type 1,Endolysin,NEUROTENSIN RECEPTOR; MEMBRANE PROTEIN, G PROTEIN-COUPLED RECEPTOR; HET: PEG, TCE; 3.3A {Rattus norvegicus}
38297 Probab=65.04 E-value=0.84 Score=47.61 Aligned_cols=16 Identities=6% Similarity=-0.145 Sum_probs=10.0 Template_Neff=11.700
38298
38299 Q NP_000836.2 645 TIICSFRRVFLGLGMC 660 (908)
38300 Q Consensus 645 ~~~C~~~~~~~~~gf~ 660 (908)
38301 ...|.+..++..+.+.
38302 T Consensus 107 ~~~C~~~~~~~~~~~~ 122 (513)
38303 T 5T04_A 107 DAGCRGYYFLRDACTY 122 (513)
38304 T ss_pred hHHHHHHHHHHHHHHH
38305 Confidence 5678877666554443
38306
38307
38308 No 334
38309 >3ODU_B C-X-C chemokine receptor type 4; Structural Genomics, PSI-2, Protein Structure; HET: ITD, OLC, OLA; 2.5A {Homo Sapiens}
38310 Probab=65.04 E-value=0.84 Score=47.38 Aligned_cols=35 Identities=14% Similarity=0.200 Sum_probs=18.7 Template_Neff=11.900
38311
38312 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYA-ALLTKTNRIHRIFE 678 (908)
38313 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~-~l~~K~~ri~~if~ 678 (908)
38314 ....|.+..++..+++....- .++.=.-|.+.+.+
38315 T Consensus 115 ~~~~C~~~~~~~~~~~~~s~~~~~~iaidR~~ai~~ 150 (502)
38316 T 3ODU_B 115 GNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVH 150 (502)
38317 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
38318 T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
38319 Confidence 467888888776655443333 23333445554443
38320
38321
38322 No 335
38323 >3OE0_A C-X-C chemokine receptor type 4; Structural Genomics, PSI-2, Protein Structure; 2.9A {Homo Sapiens, Enterobacteria phage T4}
38324 Probab=61.92 E-value=1 Score=46.52 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=18.1 Template_Neff=11.900
38325
38326 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAA-LLTKTNRIHRIF 677 (908)
38327 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~-l~~K~~ri~~if 677 (908)
38328 ....|.+..++..+++....-. ++.=.-|.+.+.
38329 T Consensus 115 ~~~~C~~~~~~~~~~~~~s~~~l~~iaidRy~~i~ 149 (499)
38330 T 3OE0_A 115 GNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIV 149 (499)
38331 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38332 T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38333 Confidence 3678888777766554433332 233334544444
38334
38335
38336 No 336
38337 >5T1A_A C-C chemokine receptor type 2; C-C Chemokine Receptor type 2; HET: SO4, 73R, VT5, YCM, OLC; 2.806A {Homo sapiens}
38338 Probab=60.86 E-value=1.1 Score=46.45 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=17.2 Template_Neff=11.700
38339
38340 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAAL-LTKTNRIHRIF 677 (908)
38341 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l-~~K~~ri~~if 677 (908)
38342 ....|.+..++..+++....-.+ +.=..|.+.+.
38343 T Consensus 119 ~~~~C~~~~~~~~~~~~~s~~~l~~iaidRy~~i~ 153 (508)
38344 T 5T1A_A 119 GNAMCKLFTGLYHIGYFGGIFFIILLTIDRYLAIV 153 (508)
38345 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
38346 T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38347 Confidence 36778887776654443333222 22334544444
38348
38349
38350 No 337
38351 >6K41_R Guanine nucleotide-binding protein G(o) subunit; GPCR, Complex, cryo-EM, MEMBRANE PROTEIN; HET: CZX; 2.9A {Homo sapiens}
38352 Probab=60.42 E-value=1.2 Score=46.60 Aligned_cols=34 Identities=15% Similarity=0.001 Sum_probs=15.1 Template_Neff=10.700
38353
38354 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
38355 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
38356 ....|.+..++..+.+....-.+++= .-|...+.
38357 T Consensus 280 ~~~~C~~~~~l~~~~~~~s~~~l~~iai~R~~ai~ 314 (512)
38358 T 6K41_R 280 RRTWCEVYLALDVLFCTSSIVHLCAISLDRYWAVS 314 (512)
38359 T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38360 T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38361 Confidence 35678887777665544433333332 33444443
38362
38363
38364 No 338
38365 >6K42_R Guanine nucleotide-binding protein G(i) subunit; GPCR, Complex, cryo-EM, MEMBRANE PROTEIN; HET: CZX; 4.1A {Bos taurus}
38366 Probab=60.42 E-value=1.2 Score=46.60 Aligned_cols=34 Identities=15% Similarity=0.001 Sum_probs=17.5 Template_Neff=10.700
38367
38368 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
38369 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
38370 ....|.+..++..+.+....-.+++= .-|...+.
38371 T Consensus 280 ~~~~C~~~~~l~~~~~~~s~~~l~~iai~R~~ai~ 314 (512)
38372 T 6K42_R 280 RRTWCEVYLALDVLFCTSSIVHLCAISLDRYWAVS 314 (512)
38373 T ss_dssp CSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38374 T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38375 Confidence 35678887777665544433333332 33444443
38376
38377
38378 No 339
38379 >5YC8_A Muscarinic acetylcholine receptor M2,Redesigned apo-cytochrome; GPCR crystallography, rationally thermostabilized mutant; HET: 3C0; 2.5A {Homo sapiens}
38380 Probab=60.13 E-value=1.2 Score=44.60 Aligned_cols=18 Identities=6% Similarity=0.071 Sum_probs=11.5 Template_Neff=12.400
38381
38382 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
38383 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
38384 ....|.+..++..++...
38385 T Consensus 94 ~~~~C~~~~~~~~~~~~~ 111 (421)
38386 T 5YC8_A 94 GPVVCDLWLALDYVVSNA 111 (421)
38387 T ss_dssp CHHHHHHHHHHHHHHHHH
38388 T ss_pred hHHHHHHHHHHHHHHHHH
38389 Confidence 367788877766554443
38390
38391
38392 No 340
38393 >6N4B_R Guanine nucleotide-binding protein G(i) subunit; Cannabinoid receptor, GPCR, synthetic cannabinoid; HET: KCA, CLR; 3.0A {Homo sapiens}
38394 Probab=59.77 E-value=1.2 Score=46.18 Aligned_cols=18 Identities=6% Similarity=0.296 Sum_probs=7.9 Template_Neff=10.800
38395
38396 Q NP_000836.2 587 PVFVAILGIIATTFVIVT 604 (908)
38397 Q Consensus 587 ~~~~~~~~i~~~~~~~~~ 604 (908)
38398 ..++.++|++.-++++..
38399 T Consensus 138 ~~ii~iigi~~N~lvl~~ 155 (495)
38400 T 6N4B_R 138 SLTLGTFTVLENLLVLCV 155 (495)
38401 T ss_pred HHHHHHHHHHHHHHHHHH
38402 Confidence 344444555444443333
38403
38404
38405 No 341
38406 >3VW7_A Chimera of Proteinase-activated receptor 1; High resolution structure, protease-activated receptor; HET: OLC, VPX; 2.2A {Homo sapiens, Enterobacteria phage T4, Homo sapiens}
38407 Probab=59.50 E-value=1.2 Score=45.59 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=17.4 Template_Neff=12.200
38408
38409 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38410 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38411 ....|.+..++..+.+....-.+++ =.-|.+.+.
38412 T Consensus 89 ~~~~C~~~~~~~~~~~~~s~~~~~~iaidRy~ai~ 123 (484)
38413 T 3VW7_A 89 GSELCRFVTAAFYCNMYASILLMTVISIDRFLAVV 123 (484)
38414 T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
38415 Confidence 3567888777765544433333332 233444443
38416
38417
38418 No 342
38419 >6GPS_A C-C chemokine receptor type 2,Rubredoxin,C-C; GPCR, Signalling, Drug-design, SIGNALING PROTEIN; HET: F7N; 3.3A {Homo sapiens}
38420 Probab=59.46 E-value=1.2 Score=44.63 Aligned_cols=23 Identities=9% Similarity=0.160 Sum_probs=13.4 Template_Neff=12.300
38421
38422 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAAL 666 (908)
38423 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l 666 (908)
38424 ....|.+..++..+++....-.+
38425 T Consensus 108 ~~~~C~~~~~~~~~~~~~s~~~~ 130 (429)
38426 T 6GPS_A 108 GNAMCKLFTGLYHIGYFGGIFFI 130 (429)
38427 T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
38428 Confidence 35678887776665544433333
38429
38430
38431 No 343
38432 >6ME8_A Soluble cytochrome b562,Melatonin receptor type; GPCR, melatonin receptor type 1B; HET: JEY; 3.1A {Escherichia coli}
38433 Probab=58.95 E-value=1.3 Score=45.24 Aligned_cols=26 Identities=15% Similarity=0.132 Sum_probs=15.9 Template_Neff=11.700
38434
38435 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK 669 (908)
38436 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K 669 (908)
38437 ....|.+..++..+++...+-.+++-
38438 T Consensus 185 ~~~~C~~~~~~~~~~~~~s~~~~~~i 210 (460)
38439 T 6ME8_A 185 GEEHCKASAFVMGLSVIGSVWNITAI 210 (460)
38440 T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
38441 Confidence 36778888777766555444444443
38442
38443
38444 No 344
38445 >6ME6_A Soluble cytochrome b562,Melatonin receptor type; GPCR, melatonin receptor type 1B; HET: OLC, JEY; 2.8A {Escherichia coli}
38446 Probab=58.34 E-value=1.3 Score=45.13 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=17.1 Template_Neff=11.600
38447
38448 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38449 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38450 ....|.+..++..+++....-.+++ -.-|...+.
38451 T Consensus 185 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 219 (460)
38452 T 6ME6_A 185 GEEHCKASAFVMGLSVIGSVWNITAIAIDRYLYIC 219 (460)
38453 T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38454 T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38455 Confidence 3667888777665544433333322 233444443
38456
38457
38458 No 345
38459 >4GRV_A Neurotensin receptor type 1, Neurotensin; G-protein coupled receptor, neurotensin receptor; HET: EPE; 2.802A {Rattus norvegicus, Enterobacteria phage T4}
38460 Probab=58.13 E-value=1.4 Score=45.79 Aligned_cols=33 Identities=9% Similarity=-0.115 Sum_probs=16.5 Template_Neff=11.800
38461
38462 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAA-LLTKTNRIHRIF 677 (908)
38463 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~-l~~K~~ri~~if 677 (908)
38464 ...|.+..++..+++....-. ++.=..|.+.+.
38465 T Consensus 107 ~~~C~~~~~~~~~~~~~s~~~~~~iai~Ry~ai~ 140 (510)
38466 T 4GRV_A 107 DAGCRGYYFLRDACTYATALNVASLSVARYLAIC 140 (510)
38467 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38468 Confidence 567887776655444333222 233344554444
38469
38470
38471 No 346
38472 >6WWZ_R Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit; GPCR, Chemokine, Chemokine receptor, Complex; 3.34A {Rattus norvegicus}
38473 Probab=57.89 E-value=1.4 Score=46.26 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=17.1 Template_Neff=10.400
38474
38475 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRI 676 (908)
38476 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~i 676 (908)
38477 ....|.+..++..+++...+-.++.- ..|...+
38478 T Consensus 259 ~~~~C~~~~~~~~~~~~~s~~~l~~iaidRy~ai 292 (529)
38479 T 6WWZ_R 259 SNATCKLLKGIYAINFNCGMLLLTCISMDRYIAI 292 (529)
38480 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38481 T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38482 Confidence 35678887777665554433333332 2344444
38483
38484
38485 No 347
38486 >5ZKC_A Muscarinic acetylcholine receptor M2,Apo-cytochrome b562; GPCR crystallography, rationally thermostabilized mutant; HET: 3C0; 2.3A {Homo sapiens}
38487 Probab=57.52 E-value=1.4 Score=43.99 Aligned_cols=34 Identities=12% Similarity=0.115 Sum_probs=17.5 Template_Neff=12.400
38488
38489 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38490 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38491 ....|.+..++..++.....-.+++ =.-|...+.
38492 T Consensus 94 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 128 (421)
38493 T 5ZKC_A 94 GPVVCDLWLALDYVVSNARVMNLLIISFDRYFCVT 128 (421)
38494 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38495 T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
38496 Confidence 3678888877665554433333322 233444443
38497
38498
38499 No 348
38500 >5IU7_A Adenosine receptor A2a,Soluble cytochrome b562,Adenosine; G-protein-coupled receptor, integral membrane protein; HET: CLR, OLC, OLA, 6DY, OLB; 1.9A {Homo sapiens}
38501 Probab=57.19 E-value=1.4 Score=44.21 Aligned_cols=17 Identities=18% Similarity=0.092 Sum_probs=10.0 Template_Neff=12.200
38502
38503 Q NP_000836.2 644 DTIICSFRRVFLGLGMC 660 (908)
38504 Q Consensus 644 ~~~~C~~~~~~~~~gf~ 660 (908)
38505 ....|.+..++..++..
38506 T Consensus 82 ~~~~C~~~~~~~~~~~~ 98 (433)
38507 T 5IU7_A 82 ACHGCLFIACFVLVLAQ 98 (433)
38508 T ss_pred cchHHHHHHHHHHHHHH
38509 Confidence 35567777766554443
38510
38511
38512 No 349
38513 >5NM4_A Lysozyme C (E.C.3.2.1.17); room-temperature, serial crystallography, Signaling protein; HET: ZMA, OLA, CLR; 1.7A {Homo sapiens}
38514 Probab=57.15 E-value=1.4 Score=44.20 Aligned_cols=17 Identities=18% Similarity=0.092 Sum_probs=10.0 Template_Neff=12.200
38515
38516 Q NP_000836.2 644 DTIICSFRRVFLGLGMC 660 (908)
38517 Q Consensus 644 ~~~~C~~~~~~~~~gf~ 660 (908)
38518 ....|.+..++..++..
38519 T Consensus 82 ~~~~C~~~~~~~~~~~~ 98 (433)
38520 T 5NM4_A 82 ACHGCLFIACFVLVLAQ 98 (433)
38521 T ss_dssp EHHHHHHHHHHHHHHHH
38522 T ss_pred ccchHHHHHHHHHHHHH
38523 Confidence 35567777666554443
38524
38525
38526 No 350
38527 >5WIU_A D(4) dopamine receptor,Soluble cytochrome b562; GPCR, dopamine receptor, antagonist, sodium; HET: PEG, PO4, OLA, AQD; 1.962A {Homo sapiens}
38528 Probab=56.40 E-value=1.5 Score=43.87 Aligned_cols=22 Identities=9% Similarity=-0.076 Sum_probs=13.0 Template_Neff=12.100
38529
38530 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAA 665 (908)
38531 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~ 665 (908)
38532 ....|.+..++..+.+....-.
38533 T Consensus 108 ~~~~C~~~~~~~~~~~~~s~~~ 129 (422)
38534 T 5WIU_A 108 SPRLCDALMAMDVMLCTASIFN 129 (422)
38535 T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
38536 T ss_pred chhHHHHHHHHHHHHHHHHHHH
38537 Confidence 3567888777765544433333
38538
38539
38540 No 351
38541 >5WIV_A D(4) dopamine receptor,Soluble cytochrome b562; GPCR, dopamine receptor, antagonist, sodium; HET: PEG, PO4, OLA, AQD; 2.143A {Homo sapiens}
38542 Probab=56.40 E-value=1.5 Score=43.87 Aligned_cols=22 Identities=9% Similarity=-0.076 Sum_probs=13.0 Template_Neff=12.100
38543
38544 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAA 665 (908)
38545 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~ 665 (908)
38546 ....|.+..++..+.+....-.
38547 T Consensus 108 ~~~~C~~~~~~~~~~~~~s~~~ 129 (422)
38548 T 5WIV_A 108 SPRLCDALMAMDVMLCTASIFN 129 (422)
38549 T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
38550 T ss_pred chhHHHHHHHHHHHHHHHHHHH
38551 Confidence 3567888777765544433333
38552
38553
38554 No 352
38555 >5NDD_A Lysozyme,Proteinase-activated receptor 2,Soluble cytochrome b562,Proteinase-activated; MEMBRANE PROTEIN, GPCR, 7TM; HET: 8TZ; 2.801A {Enterobacteria phage T4}
38556 Probab=56.28 E-value=1.5 Score=46.94 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=17.2 Template_Neff=11.000
38557
38558 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38559 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38560 ....|.+..++..+.+....-.+++ =.-|...+.
38561 T Consensus 273 ~~~~C~~~~~l~~~~~~~s~~~l~~iaidRy~aI~ 307 (619)
38562 T 5NDD_A 273 GEALCNVLIGFFYANMYCSILFLTCLSVQRAWEIV 307 (619)
38563 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38564 T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38565 Confidence 3567888777665544433333333 233444443
38566
38567
38568 No 353
38569 >4IB4_A Human 5-HT2B receptor_BRIL chimera; ergotamine, Novel protein engineering, GPCR; HET: CLR, PLM, OLA, ERM, PEG, OLC, OLB; 2.7A {Homo sapiens}
38570 Probab=56.21 E-value=1.5 Score=43.85 Aligned_cols=34 Identities=18% Similarity=0.037 Sum_probs=17.5 Template_Neff=12.400
38571
38572 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38573 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38574 ....|.+..++..+++....-.+++ -.-|...+.
38575 T Consensus 99 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 133 (430)
38576 T 4IB4_A 99 PLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIK 133 (430)
38577 T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38578 T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
38579 Confidence 3567888777765554433333333 233444443
38580
38581
38582 No 354
38583 >6AK3_A Prostaglandin E2 receptor EP3 subtype,Soluble; GPCR, lipid, signaling protein, prostanoid; HET: POV, P2E; 2.9A {Homo sapiens}
38584 Probab=55.29 E-value=1.6 Score=43.47 Aligned_cols=19 Identities=16% Similarity=0.140 Sum_probs=11.2 Template_Neff=12.300
38585
38586 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFS 662 (908)
38587 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~ 662 (908)
38588 ....|.+..++..+.+...
38589 T Consensus 88 ~~~~c~~~~~~~~~~~~~s 106 (418)
38590 T 6AK3_A 88 SGRLCTFFGLTMTVFGLSS 106 (418)
38591 T ss_dssp GGHHHHHHHHHHHHHHHHH
38592 T ss_pred CchhHHHHHHHHHHHHHHH
38593 Confidence 3467887776665444433
38594
38595
38596 No 355
38597 >6AK3_B Prostaglandin E2 receptor EP3 subtype,Soluble; GPCR, lipid, signaling protein, prostanoid; HET: P2E, POV; 2.9A {Homo sapiens}
38598 Probab=55.29 E-value=1.6 Score=43.47 Aligned_cols=19 Identities=16% Similarity=0.140 Sum_probs=10.8 Template_Neff=12.300
38599
38600 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFS 662 (908)
38601 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~ 662 (908)
38602 ....|.+..++..+.+...
38603 T Consensus 88 ~~~~c~~~~~~~~~~~~~s 106 (418)
38604 T 6AK3_B 88 SGRLCTFFGLTMTVFGLSS 106 (418)
38605 T ss_dssp -CHHHHHHHHHHHHHHHHH
38606 T ss_pred CchhHHHHHHHHHHHHHHH
38607 Confidence 3467887776665444433
38608
38609
38610 No 356
38611 >6M9T_A Prostaglandin E2 receptor EP3 subtype,Endolysin; GPCR, prostaglandin E2 receptor 3; HET: SO4, OLA, J9P, OLC; 2.5A {Homo sapiens}
38612 Probab=54.94 E-value=1.7 Score=45.58 Aligned_cols=17 Identities=12% Similarity=0.104 Sum_probs=10.2 Template_Neff=11.200
38613
38614 Q NP_000836.2 645 TIICSFRRVFLGLGMCF 661 (908)
38615 Q Consensus 645 ~~~C~~~~~~~~~gf~l 661 (908)
38616 ...|.+..++..+++..
38617 T Consensus 139 ~~~C~~~~~~~~~~~~~ 155 (537)
38618 T 6M9T_A 139 GRLCTFFGLTMTVFGLS 155 (537)
38619 T ss_pred hhHHHHHHHHHHHHHHH
38620 Confidence 46777777665544443
38621
38622
38623 No 357
38624 >5ZKP_A Platelet-activating factor receptor,Flavodoxin; G protein-coupled receptor, Platelet-activating factor; HET: 9ER, FMN; 2.81A {Homo sapiens}
38625 Probab=54.81 E-value=1.7 Score=44.22 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=16.9 Template_Neff=12.200
38626
38627 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALL-TKTNRIHRIF 677 (908)
38628 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~-~K~~ri~~if 677 (908)
38629 ....|.+..++..+......-.++ .=.-|.+.+.
38630 T Consensus 88 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~Ry~~i~ 122 (466)
38631 T 5ZKP_A 88 PKFLCNVAGCLFFINTYCSVAFLGVITYNRYQAVT 122 (466)
38632 T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38633 Confidence 356788877765544433333322 2334444444
38634
38635
38636 No 358
38637 >5ZKQ_A Platelet-activating factor receptor; G protein-coupled receptor, Platelet-activating factor; HET: SO4, 9EU, OLC; 2.9A {Homo sapiens}
38638 Probab=54.65 E-value=1.7 Score=43.68 Aligned_cols=18 Identities=6% Similarity=0.264 Sum_probs=11.5 Template_Neff=12.300
38639
38640 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
38641 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
38642 ....|.+..++..++...
38643 T Consensus 88 ~~~~C~~~~~~~~~~~~~ 105 (438)
38644 T 5ZKQ_A 88 PKFLCNVAGCLFFINTYC 105 (438)
38645 T ss_dssp CHHHHHHHHHHHHHHHHH
38646 T ss_pred CHHHHHHHHHHHHHHHHH
38647 Confidence 367788887766554443
38648
38649
38650 No 359
38651 >5W0P_C T4 lysozyme-human rhodopsin-mouse visual arrestin; rhodopsin, GPCR, arrestin, GRK, phosphorylation; HET: TPO, SEP, NAG; 3.013A {Enterobacteria phage RB55}
38652 Probab=54.43 E-value=1.7 Score=49.17 Aligned_cols=21 Identities=19% Similarity=0.278 Sum_probs=12.4 Template_Neff=10.500
38653
38654 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYA 664 (908)
38655 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~ 664 (908)
38656 ....|.+..++..+.+...+-
38657 T Consensus 266 ~~~~C~~~~~l~~~~~~~s~~ 286 (906)
38658 T 5W0P_C 266 GPTGCNLQGFFATLGGEIALW 286 (906)
38659 T ss_pred CchHHHHHHHHHHHHHHHHHH
38660 Confidence 356788877766554443333
38661
38662
38663 No 360
38664 >5W0P_B T4 lysozyme-human rhodopsin-mouse visual arrestin; rhodopsin, GPCR, arrestin, GRK, phosphorylation; HET: SEP, NAG, TPO; 3.013A {Enterobacteria phage RB55}
38665 Probab=54.02 E-value=1.8 Score=49.07 Aligned_cols=23 Identities=22% Similarity=0.327 Sum_probs=13.4 Template_Neff=10.500
38666
38667 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAAL 666 (908)
38668 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l 666 (908)
38669 ....|.+..++..+.+...+-.+
38670 T Consensus 266 ~~~~C~~~~~l~~~~~~~s~~~l 288 (906)
38671 T 5W0P_B 266 GPTGCNLQGFFATLGGEIALWSL 288 (906)
38672 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
38673 T ss_pred cchHHHHHHHHHHHHHHHHHHHH
38674 Confidence 35678887776665544433333
38675
38676
38677 No 361
38678 >6OSA_R Neurotensin receptor type 1, JMV449; GPCR, G-protein, complex, SIGNALING PROTEIN;{Homo sapiens}
38679 Probab=53.46 E-value=1.8 Score=43.48 Aligned_cols=16 Identities=6% Similarity=-0.145 Sum_probs=9.8 Template_Neff=12.000
38680
38681 Q NP_000836.2 645 TIICSFRRVFLGLGMC 660 (908)
38682 Q Consensus 645 ~~~C~~~~~~~~~gf~ 660 (908)
38683 ...|.+..++..+++.
38684 T Consensus 158 ~~~c~~~~~~~~~~~~ 173 (435)
38685 T 6OSA_R 158 DAGCRGYYFLRDACTY 173 (435)
38686 T ss_pred HHHHHHHHHHHHHHHH
38687 Confidence 5678777666554443
38688
38689
38690 No 362
38691 >4U14_A Muscarinic acetylcholine receptor M3,Endolysin fusion; alpha helix, G protein-coupled receptors; HET: 0HK; 3.57A {Rattus norvegicus}
38692 Probab=52.86 E-value=1.9 Score=43.86 Aligned_cols=22 Identities=9% Similarity=0.028 Sum_probs=12.9 Template_Neff=11.700
38693
38694 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAA 665 (908)
38695 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~ 665 (908)
38696 ....|.+..++..++.....-.
38697 T Consensus 81 ~~~~C~~~~~~~~~~~~~s~~~ 102 (460)
38698 T 4U14_A 81 GNLACDLWLSIDYVASNASVMN 102 (460)
38699 T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
38700 T ss_pred CccHHHHHHHHHHHHHHHHHHH
38701 Confidence 3677888777666554433333
38702
38703
38704 No 363
38705 >5TUD_A Chimera protein of 5-hydroxytryptamine receptor; 7-TM, GPCR, Fab, complex, SIGNALING; HET: ERM; 3.0A {Homo sapiens}
38706 Probab=52.52 E-value=1.9 Score=43.67 Aligned_cols=34 Identities=18% Similarity=0.025 Sum_probs=17.1 Template_Neff=11.900
38707
38708 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALL-TKTNRIHRIF 677 (908)
38709 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~-~K~~ri~~if 677 (908)
38710 ....|.+..++..+......-.++ .=.-|...+.
38711 T Consensus 115 ~~~~C~~~~~~~~~~~~~s~~~~~~iaidR~~~i~ 149 (457)
38712 T 5TUD_A 115 PLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIK 149 (457)
38713 T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38714 T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38715 Confidence 356788877766544433333322 2334444443
38716
38717
38718 No 364
38719 >6C1R_B C5a anaphylatoxin chemotactic receptor 1; GPCR, MEMBRANE PROTEIN-INHIBITOR complex; HET: OLA, MLI, ZAL, EFD, OLC, YCM; 2.2A {Escherichia coli}
38720 Probab=52.18 E-value=2 Score=43.13 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=17.0 Template_Neff=11.500
38721
38722 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38723 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38724 ....|.+..++..+++....-.+++ -..|...+.
38725 T Consensus 191 ~~~~C~~~~~~~~~~~~~s~~~~~~is~~R~~~i~ 225 (422)
38726 T 6C1R_B 191 GGAACSILPSLILLNMYASILLLATISADRFLLVF 225 (422)
38727 T ss_dssp CHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHH
38728 T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
38729 Confidence 3567887777665544433333333 233444443
38730
38731
38732 No 365
38733 >6OL9_A Muscarinic acetylcholine receptor M5, T4; GPCR inhibitor complex, MEMBRANE PROTEIN; HET: P33, 0HK, OLA, OLC; 2.541A {Homo sapiens}
38734 Probab=52.11 E-value=2 Score=44.03 Aligned_cols=16 Identities=6% Similarity=0.185 Sum_probs=10.0 Template_Neff=11.600
38735
38736 Q NP_000836.2 644 DTIICSFRRVFLGLGM 659 (908)
38737 Q Consensus 644 ~~~~C~~~~~~~~~gf 659 (908)
38738 ....|.+..++..++.
38739 T Consensus 81 ~~~~C~~~~~~~~~~~ 96 (480)
38740 T 6OL9_A 81 GSLACDLWLALDYVAS 96 (480)
38741 T ss_dssp CHHHHHHHHHHHHHHH
38742 T ss_pred hHHHHHHHHHHHHHHH
38743 Confidence 3567887776655444
38744
38745
38746 No 366
38747 >6LI0_A G-protein coupled receptor 52,Flavodoxin,G-protein coupled; Human GPR52 receptor, Class A; HET: FMN, FLC, OLC, EN6, PEG; 2.2A {Homo sapiens}
38748 Probab=52.05 E-value=2 Score=43.78 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=17.0 Template_Neff=11.800
38749
38750 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALL-TKTNRIHRIF 677 (908)
38751 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~-~K~~ri~~if 677 (908)
38752 ....|.+..++..+.+....-.++ .=.-|.+.+.
38753 T Consensus 95 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 129 (468)
38754 T 6LI0_A 95 ESLTCQVFGYIISVLKSVSMWCLACISVDRYLAIT 129 (468)
38755 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38756 T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38757 Confidence 466788877765544433333332 2333444443
38758
38759
38760 No 367
38761 >4XES_A neurotensin receptor subtype 1, lysozyme; membrane protein, G protein-coupled receptor; HET: PEG, GOL, CIT, EPE; 2.6A {Rattus norvegicus}
38762 Probab=51.22 E-value=2.1 Score=44.65 Aligned_cols=33 Identities=9% Similarity=-0.048 Sum_probs=16.5 Template_Neff=11.800
38763
38764 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38765 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38766 ...|.+..++..+.+....-.+++ -.-|...+.
38767 T Consensus 107 ~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 140 (541)
38768 T 4XES_A 107 DAGCRGYYFLRDACTYATALNVASLSVARYLAIC 140 (541)
38769 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38770 T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38771 Confidence 567887776665544433333332 233444443
38772
38773
38774 No 368
38775 >6C1Q_B C5a anaphylatoxin chemotactic receptor 1; GPCR, MEMBRANE PROTEIN; HET: 9P2, YCM, ZAL; 2.9A {Escherichia coli}
38776 Probab=50.95 E-value=2.1 Score=42.87 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=16.9 Template_Neff=11.500
38777
38778 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38779 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38780 ....|.+..++..+++....-.+++ -..|...+.
38781 T Consensus 191 ~~~~C~~~~~~~~~~~~~s~~~~~~is~~R~~~i~ 225 (422)
38782 T 6C1Q_B 191 GGAACSILPSLILLNMYASILLLATISADRFLLVF 225 (422)
38783 T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
38784 Confidence 3567887777665544433333333 233444443
38785
38786
38787 No 369
38788 >3V2Y_A Sphingosine 1-phosphate receptor 1, Lysozyme; sphingosine, EDG receptor, lipid receptor; HET: NAG, ML5; 2.8A {Homo sapiens, Enterobacteria phage T4}
38789 Probab=50.54 E-value=2.2 Score=44.40 Aligned_cols=33 Identities=15% Similarity=0.082 Sum_probs=16.0 Template_Neff=11.000
38790
38791 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
38792 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
38793 ...|.+..++..++.....-.+++= .-|.+.+.
38794 T Consensus 132 ~~~c~~~~~~~~~~~~~s~~~l~~iaidRy~aI~ 165 (520)
38795 T 3V2Y_A 132 PAQWFLREGSMFVALSASVFSLLAIAIERYITML 165 (520)
38796 T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38797 Confidence 4678777766554444333333332 23444443
38798
38799
38800 No 370
38801 >5UIW_A C-C chemokine receptor type 5,Rubredoxin,C-C; G-protein coupled receptor, Chemokine receptor; HET: OLC, OLA; 2.204A {Homo sapiens}
38802 Probab=50.33 E-value=2.2 Score=42.19 Aligned_cols=19 Identities=11% Similarity=0.266 Sum_probs=11.5 Template_Neff=12.500
38803
38804 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFS 662 (908)
38805 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~ 662 (908)
38806 ....|.+..++..+++...
38807 T Consensus 99 ~~~~c~~~~~~~~~~~~~s 117 (411)
38808 T 5UIW_A 99 GNTMCQLLTGLYFIGFFSG 117 (411)
38809 T ss_dssp HHHHHHHHHHHHHHHHHHH
38810 T ss_pred chhHHHHHHHHHHHHHHHH
38811 Confidence 3567887777665544433
38812
38813
38814 No 371
38815 >5OLZ_A Adenosine receptor A2a,Soluble cytochrome b562,Adenosine; G-Protein Coupled Receptor, Adenosine 2a; HET: TAR, CLR, OLA, T4E, OLC, PGE; 1.9A {Homo sapiens}
38816 Probab=49.96 E-value=2.3 Score=42.63 Aligned_cols=16 Identities=19% Similarity=0.104 Sum_probs=9.3 Template_Neff=12.200
38817
38818 Q NP_000836.2 645 TIICSFRRVFLGLGMC 660 (908)
38819 Q Consensus 645 ~~~C~~~~~~~~~gf~ 660 (908)
38820 ...|.+..++..+...
38821 T Consensus 84 ~~~C~~~~~~~~~~~~ 99 (434)
38822 T 5OLZ_A 84 CHGCLFIACFVLVLAQ 99 (434)
38823 T ss_dssp HHHHHHHHHHHHHHHH
38824 T ss_pred hhHHHHHHHHHHHHHH
38825 Confidence 5567776666554433
38826
38827
38828 No 372
38829 >6P9Y_R Guanine nucleotide-binding protein G(s) subunit; GPCR, MEMBRANE PROTEIN;{Homo sapiens}
38830 Probab=49.66 E-value=2.3 Score=43.79 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=18.4 Template_Neff=9.900
38831
38832 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLTKTNRIH 674 (908)
38833 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~K~~ri~ 674 (908)
38834 ...|.+..++...+....+..+++-.+-.+
38835 T Consensus 219 ~~~C~~~~~~~~~~~~~s~~wl~~iai~ry 248 (483)
38836 T 6P9Y_R 219 TVECKAVMVFFHYCVVSNYFWLFIEGLYLF 248 (483)
38837 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38838 T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38839 Confidence 578888877766665555555555444333
38840
38841
38842 No 373
38843 >6MXT_A Fusion protein of Lysozyme and; G protein-coupled receptor, adrenergic receptor; HET: OLA, K5Y, OLC, P33, HTO, YCM; 2.95934213525A {Enterobacteria phage T4}
38844 Probab=49.35 E-value=2.4 Score=43.36 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=16.6 Template_Neff=11.400
38845
38846 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38847 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38848 ....|.+..++..++....+-.+++ =.-|...+.
38849 T Consensus 237 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 271 (472)
38850 T 6MXT_A 237 GNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAIT 271 (472)
38851 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
38852 T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
38853 Confidence 3567877776655444333333322 234444443
38854
38855
38856 No 374
38857 >6KUX_A alpha2A adrenergic receptor; alpha2A adrenergic receptor, antagonist, GPCR; HET: E3F, PEG, FLC; 2.7A {Spodoptera frugiperda}
38858 Probab=48.92 E-value=2.4 Score=41.68 Aligned_cols=18 Identities=11% Similarity=-0.077 Sum_probs=11.3 Template_Neff=12.300
38859
38860 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
38861 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
38862 ....|.+..++..++...
38863 T Consensus 83 ~~~~C~~~~~~~~~~~~~ 100 (395)
38864 T 6KUX_A 83 GKAWCEIYLALDVLFCTS 100 (395)
38865 T ss_dssp SHHHHHHHHHHHHHHHHH
38866 T ss_pred CchHHHHHHHHHHHHHHH
38867 Confidence 356788877766554443
38868
38869
38870 No 375
38871 >4U15_B M3-mT4L, Tiotropium; GPCR T4L Stabillized Crystallography, MEMBRANE; HET: OLC, TAR, 0HK, P6G; 2.8A {Rattus norvegicus}
38872 Probab=48.41 E-value=2.5 Score=42.07 Aligned_cols=18 Identities=6% Similarity=0.032 Sum_probs=11.3 Template_Neff=12.100
38873
38874 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
38875 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
38876 ....|.+..++..+++..
38877 T Consensus 81 ~~~~C~~~~~~~~~~~~~ 98 (418)
38878 T 4U15_B 81 GNLACDLWLSIDYVASNA 98 (418)
38879 T ss_dssp CSHHHHHHHHHHHHHHHH
38880 T ss_pred cccHHHHHHHHHHHHHHH
38881 Confidence 367788877766554443
38882
38883
38884 No 376
38885 >3EML_A Human Adenosine A2A receptor/T4 lysozyme; adenosine, caffeine, GPCR, membrane protein; HET: STE, ZMA, SO4; 2.6A {Homo sapiens, Enterobacteria phage T4, Homo sapiens}
38886 Probab=48.34 E-value=2.5 Score=43.30 Aligned_cols=15 Identities=20% Similarity=0.173 Sum_probs=9.0 Template_Neff=11.700
38887
38888 Q NP_000836.2 644 DTIICSFRRVFLGLG 658 (908)
38889 Q Consensus 644 ~~~~C~~~~~~~~~g 658 (908)
38890 ....|.+..++..+.
38891 T Consensus 88 ~~~~C~~~~~l~~~~ 102 (488)
38892 T 3EML_A 88 ACHGCLFIACFVLVL 102 (488)
38893 T ss_dssp CHHHHHHHHHHHHHH
38894 T ss_pred cchHHHHHHHHHHHH
38895 Confidence 356677776665443
38896
38897
38898 No 377
38899 >6ORV_RP Guanine nucleotide-binding protein G(s) subunit; G-coupled protein receptor, GPCR, non-peptide; HET: N2V; 3.0A {Homo sapiens}
38900 Probab=48.20 E-value=2.5 Score=43.60 Aligned_cols=34 Identities=15% Similarity=0.304 Sum_probs=20.6 Template_Neff=9.600
38901
38902 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTKTNRIHRIF 677 (908)
38903 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K~~ri~~if 677 (908)
38904 ....|.+..++........+.-+++-.+-+|...
38905 T Consensus 231 ~~~~C~~~~~~~~~~~~as~~wl~~~al~l~~~i 264 (491)
38906 T 6ORV_RP 231 DSLSCRLVFLLMQYCVAANYYWLLVEGVYLYTLL 264 (491)
38907 T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38908 Confidence 3578888877766666555555555554444433
38909
38910
38911 No 378
38912 >3PBL_A D(3) dopamine receptor; Structural Genomics, PSI-2, PSI-Biology, Protein; HET: ETQ, MAL; 2.89A {Homo sapiens, Enterobacteria phage T4}
38913 Probab=47.84 E-value=2.6 Score=43.15 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=16.5 Template_Neff=11.500
38914
38915 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38916 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38917 ...|.+..++..+......-.+++ =.-|.+.+.
38918 T Consensus 109 ~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 142 (481)
38919 T 3PBL_A 109 RICCDVFVTLDVMMCTASIWNLCAISIDRYTAVV 142 (481)
38920 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
38921 Confidence 567887776655444333333322 334444443
38922
38923
38924 No 379
38925 >6CMO_R Soluble cytochrome b562,Rhodopsin, Guanine nucleotide-binding; Rhodopsin G protein ; HET: NAG;{Escherichia coli}
38926 Probab=47.51 E-value=2.6 Score=42.94 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=17.3 Template_Neff=10.900
38927
38928 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
38929 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
38930 ....|.+..++..+++....-.++. -.-|...+.
38931 T Consensus 246 ~~~~C~~~~~l~~~~~~~s~~~~~~isi~R~~ai~ 280 (463)
38932 T 6CMO_R 246 GPTGCNLQGFFATLGGEIALWSLVVLAIERYVVVC 280 (463)
38933 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38934 T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
38935 Confidence 3567888777666554433333332 233444443
38936
38937
38938 No 380
38939 >6B3J_R Guanine nucleotide-binding protein G(s) subunit; class B G protein-coupled receptor;{Homo sapiens}
38940 Probab=46.45 E-value=2.8 Score=43.23 Aligned_cols=34 Identities=15% Similarity=0.304 Sum_probs=20.6 Template_Neff=9.700
38941
38942 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTKTNRIHRIF 677 (908)
38943 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K~~ri~~if 677 (908)
38944 ....|.+..++........+.-+++-.+-+|+..
38945 T Consensus 231 ~~~~C~~~~~~~~~~~las~~wl~~~al~l~~~i 264 (491)
38946 T 6B3J_R 231 DSLSCRLVFLLMQYCVAANYYWLLVEGVYLYTLL 264 (491)
38947 T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38948 Confidence 3578888877766666555555555554444433
38949
38950
38951 No 381
38952 >4LDE_A Lysozyme, Beta-2 adrenergic receptor (E.C.3.2.1.17); G protein coupled receptor, MEMBRANE; HET: P0G, 1WV; 2.79A {Enterobacteria phage T4, Homo sapiens}
38953 Probab=45.08 E-value=3 Score=42.41 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=16.8 Template_Neff=11.400
38954
38955 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRI 676 (908)
38956 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~i 676 (908)
38957 ....|.+..++....+...+-.+++- ..|...+
38958 T Consensus 251 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i 284 (469)
38959 T 4LDE_A 251 GNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAI 284 (469)
38960 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38961 T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
38962 Confidence 35678877776655544333333332 3344443
38963
38964
38965 No 382
38966 >5WF5_A Human A2a adenosine receptor_T4L chimera; human A2a adenosine receptor, D52N; HET: OLC, UKA; 2.6A {Homo sapiens}
38967 Probab=44.86 E-value=3.1 Score=42.97 Aligned_cols=13 Identities=23% Similarity=0.319 Sum_probs=7.7 Template_Neff=10.900
38968
38969 Q NP_000836.2 645 TIICSFRRVFLGL 657 (908)
38970 Q Consensus 645 ~~~C~~~~~~~~~ 657 (908)
38971 ...|.+..++..+
38972 T Consensus 105 ~~~C~~~~~l~~~ 117 (504)
38973 T 5WF5_A 105 CHGCLFIACFVLV 117 (504)
38974 T ss_dssp HHHHHHHHHHHHH
38975 T ss_pred hHHHHHHHHHHHH
38976 Confidence 4567776665443
38977
38978
38979 No 383
38980 >2R4R_A Beta-2 adrenergic receptor, antibody for; transmembrane helix, G-protein coupled receptor; 3.4A {Mus musculus}
38981 Probab=44.84 E-value=3.1 Score=40.08 Aligned_cols=17 Identities=18% Similarity=0.247 Sum_probs=10.5 Template_Neff=12.700
38982
38983 Q NP_000836.2 644 DTIICSFRRVFLGLGMC 660 (908)
38984 Q Consensus 644 ~~~~C~~~~~~~~~gf~ 660 (908)
38985 ....|.+..++..++..
38986 T Consensus 102 ~~~~c~~~~~~~~~~~~ 118 (365)
38987 T 2R4R_A 102 GNFWCEFWTSIDVLCVT 118 (365)
38988 T ss_pred hhHHHHHHHHHHHHHHH
38989 Confidence 35678777766554443
38990
38991
38992 No 384
38993 >5TGZ_A Cannabinoid receptor 1,Flavodoxin; Membrane protein, G protein-coupled receptor; HET: OLC, OLA, ZDG, FMN; 2.8A {Homo sapiens}
38994 Probab=44.78 E-value=3.1 Score=42.00 Aligned_cols=20 Identities=10% Similarity=0.353 Sum_probs=9.1 Template_Neff=11.700
38995
38996 Q NP_000836.2 585 VVPVFVAILGIIATTFVIVT 604 (908)
38997 Q Consensus 585 ~~~~~~~~~~i~~~~~~~~~ 604 (908)
38998 ++..++.++|++.-++++..
38999 T Consensus 27 ~~~~~~~~~gi~~N~~vl~~ 46 (452)
39000 T 5TGZ_A 27 VLSLTLGTFTVLENLLVLCV 46 (452)
39001 T ss_pred HHHHHHHHHHHHHHHHHHHH
39002 Confidence 33444455555544444433
39003
39004
39005 No 385
39006 >3RZE_A Histamine H1 receptor/Lysozyme chimera; Structural Genomics, PSI-Biology, Membrane Protein; HET: PO4, D7V, 5EH, OLC; 3.1A {Homo sapiens, Enterobacteria phage T4}
39007 Probab=44.72 E-value=3.1 Score=42.02 Aligned_cols=18 Identities=11% Similarity=0.065 Sum_probs=11.4 Template_Neff=11.600
39008
39009 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
39010 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
39011 ....|.+..++..+++..
39012 T Consensus 77 ~~~~C~~~~~l~~~~~~~ 94 (452)
39013 T 3RZE_A 77 GRPLCLFWLSMDYVASTA 94 (452)
39014 T ss_dssp HHHHHHHHHHHHHHHHHH
39015 T ss_pred CCcHHHHHHHHHHHHHHH
39016 Confidence 467888877766544433
39017
39018
39019 No 386
39020 >6MEO_B Envelope glycoprotein gp160, T-cell surface; HIV coreceptor, MEMBRANE PROTEIN; HET: NAG, TYS, MAN, A2G, BMA; 3.9A {Human immunodeficiency virus 1}
39021 Probab=44.70 E-value=3.1 Score=39.05 Aligned_cols=18 Identities=11% Similarity=0.274 Sum_probs=10.9 Template_Neff=12.400
39022
39023 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
39024 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
39025 ....|....++...++..
39026 T Consensus 97 ~~~~c~~~~~~~~~~~~~ 114 (313)
39027 T 6MEO_B 97 GNTMCQLLTGLYFIGFFS 114 (313)
39028 T ss_pred cHHHHHHHHHHHHHHHHH
39029 Confidence 356788777665554443
39030
39031
39032 No 387
39033 >4ZUD_A Chimera protein of Soluble cytochrome; human Angiotensin Receptor AT1R, BRIL; HET: OLM; 2.8A {Escherichia coli}
39034 Probab=44.48 E-value=3.1 Score=41.07 Aligned_cols=22 Identities=9% Similarity=0.214 Sum_probs=12.9 Template_Neff=12.200
39035
39036 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAA 665 (908)
39037 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~ 665 (908)
39038 ....|.+..++..+++....-.
39039 T Consensus 192 ~~~~c~~~~~~~~~~~~~s~~~ 213 (410)
39040 T 4ZUD_A 192 GNYLCKIASASVSFNLYASVFL 213 (410)
39041 T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
39042 T ss_pred hHHHHHHHHHHHHHHHHHHHHH
39043 Confidence 3567888777666554433333
39044
39045
39046 No 388
39047 >4IAR_A Chimera protein of human 5-hydroxytryptamine; ergotamine, Novel protein engineering, GPCR; HET: OLB, ERM; 2.7A {Homo sapiens, Escherichia coli}
39048 Probab=44.43 E-value=3.2 Score=40.86 Aligned_cols=17 Identities=12% Similarity=0.091 Sum_probs=10.8 Template_Neff=12.300
39049
39050 Q NP_000836.2 644 DTIICSFRRVFLGLGMC 660 (908)
39051 Q Consensus 644 ~~~~C~~~~~~~~~gf~ 660 (908)
39052 ....|.+..++..++..
39053 T Consensus 89 ~~~~C~~~~~~~~~~~~ 105 (401)
39054 T 4IAR_A 89 GQVVCDFWLSSDITCCT 105 (401)
39055 T ss_dssp HHHHHHHHHHHHHHHHH
39056 T ss_pred hHHHHHHHHHHHHHHHH
39057 Confidence 36778887776554443
39058
39059
39060 No 389
39061 >6D26_A Prostaglandin D2 receptor 2, Endolysin; GPCR, MEMBRANE PROTEIN-ANTAGONIST complex; HET: PGE, SIN, OLA, SO4, FSY, YCM; 2.798A {Homo sapiens}
39062 Probab=44.14 E-value=3.2 Score=42.01 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=17.1 Template_Neff=12.100
39063
39064 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
39065 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
39066 ...|.+..++..+......-.+++ =..|.+.+.
39067 T Consensus 102 ~~~C~~~~~~~~~~~~~s~~~~~~ia~~Ry~ai~ 135 (470)
39068 T 6D26_A 102 TTFCKLHSSIFFLNMFASGFLLSAISLDRCLQVV 135 (470)
39069 T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39070 T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
39071 Confidence 567888777665544433333333 334544444
39072
39073
39074 No 390
39075 >6D27_A Prostaglandin D2 receptor 2, Endolysin; GPCR, MEMBRANE PROTEIN-ANTAGONIST complex; HET: MES, PGE, OLA, FT4, SO4, YCM, PGO; 2.738A {Homo sapiens}
39076 Probab=44.14 E-value=3.2 Score=42.01 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=17.1 Template_Neff=12.100
39077
39078 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
39079 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
39080 ...|.+..++..+......-.+++ =..|.+.+.
39081 T Consensus 102 ~~~C~~~~~~~~~~~~~s~~~~~~ia~~Ry~ai~ 135 (470)
39082 T 6D27_A 102 TTFCKLHSSIFFLNMFASGFLLSAISLDRCLQVV 135 (470)
39083 T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39084 T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
39085 Confidence 567888777665544433333333 334544444
39086
39087
39088 No 391
39089 >6A93_A 5-hydroxytryptamine receptor 2A,Soluble cytochrome b562; MEMBRANE PROTEIN; HET: CLR, PLM, 1PE, 8NU; 3.0A {Homo sapiens}
39090 Probab=43.83 E-value=3.3 Score=40.22 Aligned_cols=18 Identities=11% Similarity=-0.027 Sum_probs=11.3 Template_Neff=12.400
39091
39092 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
39093 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
39094 ....|.+..++..++...
39095 T Consensus 78 ~~~~C~~~~~~~~~~~~~ 95 (376)
39096 T 6A93_A 78 PSKLCAVWIYLDVLFSTA 95 (376)
39097 T ss_dssp CHHHHHHHHHHHHHHHHH
39098 T ss_pred ChhHHHHHHHHHHHHHHH
39099 Confidence 356788877766544443
39100
39101
39102 No 392
39103 >6A94_A 5-hydroxytryptamine receptor 2A,Human Serotonin Receptor; receptor, MEMBRANE PROTEIN; HET: PLM, 1PE, ZOT, CLR, A6L; 2.9A {Homo sapiens}
39104 Probab=43.83 E-value=3.3 Score=40.22 Aligned_cols=18 Identities=11% Similarity=-0.027 Sum_probs=11.3 Template_Neff=12.400
39105
39106 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
39107 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
39108 ....|.+..++..++...
39109 T Consensus 78 ~~~~C~~~~~~~~~~~~~ 95 (376)
39110 T 6A94_A 78 PSKLCAVWIYLDVLFSTA 95 (376)
39111 T ss_dssp CTHHHHHHHHHHHHHHHH
39112 T ss_pred ChhHHHHHHHHHHHHHHH
39113 Confidence 356788877766544443
39114
39115
39116 No 393
39117 >4IAQ_A 5-hydroxytryptamine receptor 1B; dihydroergotamine, Novel protein engineering, GPCR; HET: 2GM; 2.8A {Homo sapiens, Escherichia coli}
39118 Probab=43.20 E-value=3.4 Score=40.64 Aligned_cols=18 Identities=11% Similarity=0.043 Sum_probs=11.3 Template_Neff=12.300
39119
39120 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
39121 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
39122 ....|.+..++..++...
39123 T Consensus 89 ~~~~C~~~~~~~~~~~~~ 106 (403)
39124 T 4IAQ_A 89 GQVVCDFWLSSDITCCTA 106 (403)
39125 T ss_dssp HHHHHHHHHHHHHHHHHH
39126 T ss_pred chhHHHHHHHHHHHHHHH
39127 Confidence 356788877766554443
39128
39129
39130 No 394
39131 >6KPG_R Guanine nucleotide-binding protein G(i) subunit; GPCR, G protein, cryo-EM, MEMBRANE; HET: 8D0;{Homo sapiens}
39132 Probab=42.85 E-value=3.5 Score=41.88 Aligned_cols=18 Identities=6% Similarity=0.329 Sum_probs=8.0 Template_Neff=11.600
39133
39134 Q NP_000836.2 586 VPVFVAILGIIATTFVIV 603 (908)
39135 Q Consensus 586 ~~~~~~~~~i~~~~~~~~ 603 (908)
39136 +..+++++|++..++++.
39137 T Consensus 166 ~~~~~~~~gi~~N~l~i~ 183 (469)
39138 T 6KPG_R 166 LSLTLGTFTVLENLLVLC 183 (469)
39139 T ss_dssp HHHHHHHHHHHHHHHHHT
39140 T ss_pred HHHHHHHHHHHHhHHHHH
39141 Confidence 334444555544444333
39142
39143
39144 No 395
39145 >4MQS_A Muscarinic acetylcholine receptor M2, Nanobody; G protein-coupled receptor, Muscarinic acetylcholine; HET: IXO; 3.5A {Homo sapiens}
39146 Probab=42.44 E-value=3.5 Score=39.35 Aligned_cols=18 Identities=6% Similarity=0.071 Sum_probs=11.0 Template_Neff=12.600
39147
39148 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
39149 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
39150 ....|.+..++..+++..
39151 T Consensus 109 ~~~~c~~~~~~~~~~~~~ 126 (351)
39152 T 4MQS_A 109 GPVVCDLWLALDYVVSNA 126 (351)
39153 T ss_pred ChhHHHHHHHHHHHHHHH
39154 Confidence 356787777665554443
39155
39156
39157 No 396
39158 >4DJH_B Kappa-type opioid receptor; JDtic, GPCR newtork, PSI-Biology, KOR; HET: JDC, OLC, CIT, PEG; 2.9A {Homo Sapiens}
39159 Probab=42.33 E-value=3.6 Score=41.85 Aligned_cols=19 Identities=16% Similarity=0.183 Sum_probs=11.6 Template_Neff=11.900
39160
39161 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFS 662 (908)
39162 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~ 662 (908)
39163 ....|.+..++..+++...
39164 T Consensus 90 ~~~~C~~~~~~~~~~~~~s 108 (480)
39165 T 4DJH_B 90 GDVLCKIVLSIDYYNMFTS 108 (480)
39166 T ss_dssp HHHHHHHHHHHHHHHHHHH
39167 T ss_pred cchHHHHHHHHHHHHHHHH
39168 Confidence 3567888777655544433
39169
39170
39171 No 397
39172 >6OS0_A Type-1 angiotensin II receptor,Soluble cytochrome; GPCR, nanobody, MEMBRANE PROTEIN; HET: NAG; 2.9A {Homo sapiens}
39173 Probab=42.32 E-value=3.6 Score=40.84 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=17.3 Template_Neff=12.300
39174
39175 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAAL-LTKTNRIHRIF 677 (908)
39176 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l-~~K~~ri~~if 677 (908)
39177 ....|.+..++..+++....-.+ +.=.-|...+.
39178 T Consensus 104 ~~~~C~~~~~~~~~~~~~s~~~~~~isi~R~~~i~ 138 (425)
39179 T 6OS0_A 104 GNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIV 138 (425)
39180 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39181 T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39182 Confidence 35778887776655443333322 22334444443
39183
39184
39185 No 398
39186 >6OS1_A Type-1 angiotensin II receptor,Soluble cytochrome; GPCR, MEMBRANE PROTEIN; HET: CLR, OLC; 2.794A {Homo sapiens}
39187 Probab=42.32 E-value=3.6 Score=40.84 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=17.3 Template_Neff=12.300
39188
39189 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAAL-LTKTNRIHRIF 677 (908)
39190 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l-~~K~~ri~~if 677 (908)
39191 ....|.+..++..+++....-.+ +.=.-|...+.
39192 T Consensus 104 ~~~~C~~~~~~~~~~~~~s~~~~~~isi~R~~~i~ 138 (425)
39193 T 6OS1_A 104 GNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIV 138 (425)
39194 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39195 T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39196 Confidence 35778887776655443333322 22334444443
39197
39198
39199 No 399
39200 >6OS2_A Type-1 angiotensin II receptor,Soluble cytochrome; GPCR, MEMBRANE PROTEIN; HET: CLR, OLC, NAG; 2.7A {Homo sapiens}
39201 Probab=42.32 E-value=3.6 Score=40.84 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=17.3 Template_Neff=12.300
39202
39203 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAAL-LTKTNRIHRIF 677 (908)
39204 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l-~~K~~ri~~if 677 (908)
39205 ....|.+..++..+++....-.+ +.=.-|...+.
39206 T Consensus 104 ~~~~C~~~~~~~~~~~~~s~~~~~~isi~R~~~i~ 138 (425)
39207 T 6OS2_A 104 GNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIV 138 (425)
39208 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39209 T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39210 Confidence 35778887776655443333322 22334444443
39211
39212
39213 No 400
39214 >4YAY_A human Angiotensin Receptor_Bril Chimera; XFEL, Serial Femtosecond Crystallography, human; HET: ZD7; 2.9A {Escherichia coli}
39215 Probab=41.90 E-value=3.7 Score=40.60 Aligned_cols=25 Identities=12% Similarity=0.218 Sum_probs=14.7 Template_Neff=12.200
39216
39217 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT 668 (908)
39218 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~ 668 (908)
39219 ....|.+..++..+++...+..++.
39220 T Consensus 192 ~~~~c~~~~~~~~~~~~~s~~~~~~ 216 (414)
39221 T 4YAY_A 192 GNYLCKIASASVSFNLYASVFLLTC 216 (414)
39222 T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHH
39223 T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
39224 Confidence 3567888777766555444444433
39225
39226
39227 No 401
39228 >4N6H_A Soluble cytochrome b562, Delta-type opioid; human opioid receptor, sodium regulation; HET: OLA, PGE, TLA, OLC, EJ4; 1.8A {Escherichia coli, Homo sapiens}
39229 Probab=41.57 E-value=3.7 Score=40.64 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=16.7 Template_Neff=11.900
39230
39231 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALL-TKTNRIHRIF 677 (908)
39232 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~-~K~~ri~~if 677 (908)
39233 ....|.+..++..+.+....-.++ .=..|...+.
39234 T Consensus 193 ~~~~C~~~~~~~~~~~~~s~~~~~~ia~~R~~~i~ 227 (414)
39235 T 4N6H_A 193 GELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVC 227 (414)
39236 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39237 T ss_pred CchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
39238 Confidence 356788777665544433333222 2234544444
39239
39240
39241 No 402
39242 >6AKX_B Neuropeptide Y receptor type 1,T4; G Protein-Coupled Receptor Chemokine Receptor; HET: A4R; 2.8A {Homo sapiens}
39243 Probab=41.42 E-value=3.8 Score=39.78 Aligned_cols=22 Identities=9% Similarity=0.150 Sum_probs=12.8 Template_Neff=12.500
39244
39245 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAA 665 (908)
39246 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~ 665 (908)
39247 ....|.+..++..+++....-.
39248 T Consensus 99 ~~~~c~~~~~~~~~~~~~s~~~ 120 (381)
39249 T 6AKX_B 99 GNTMCQLLTGLYFIGFFSGIFF 120 (381)
39250 T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
39251 T ss_pred hhhHHHHHHHHHHHHHHHHHHH
39252 Confidence 3567887777665554443333
39253
39254
39255 No 403
39256 >6D9H_R Guanine nucleotide-binding protein G(i) subunit; signaling protein, membrane protein, active-state; HET: ADN;{Homo sapiens}
39257 Probab=40.77 E-value=3.9 Score=40.00 Aligned_cols=16 Identities=6% Similarity=-0.155 Sum_probs=9.4 Template_Neff=12.000
39258
39259 Q NP_000836.2 645 TIICSFRRVFLGLGMC 660 (908)
39260 Q Consensus 645 ~~~C~~~~~~~~~gf~ 660 (908)
39261 ...|.+..++..+.+.
39262 T Consensus 132 ~~~C~~~~~~~~~~~~ 147 (389)
39263 T 6D9H_R 132 FHTCLMVACPVLILTQ 147 (389)
39264 T ss_dssp HHHHHHHHHHHHHHHH
39265 T ss_pred hhHHHHHHHHHHHHHH
39266 Confidence 4578777666554443
39267
39268
39269 No 404
39270 >6RZ4_A Cysteinyl leukotriene receptor 1,Soluble cytochrome; GPCR, LCP, MEMBRANE PROTEIN, cysteinyl; HET: KNT, OLC, OLA; 2.7A {Homo sapiens}
39271 Probab=39.89 E-value=4.1 Score=40.33 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=17.2 Template_Neff=12.200
39272
39273 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYA-ALLTKTNRIHRIFE 678 (908)
39274 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~-~l~~K~~ri~~if~ 678 (908)
39275 ....|.+..++..+......- .++.-.-|...+.+
39276 T Consensus 95 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~~ 130 (423)
39277 T 6RZ4_A 95 GDFLCRLSTYALYVNLYCSIFFMTAMSFFRCIAIVF 130 (423)
39278 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
39279 T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
39280 Confidence 366788877665544333222 22333345444443
39281
39282
39283 No 405
39284 >6RZ5_B Cysteinyl leukotriene receptor 1,Soluble cytochrome; GPCR, LCP, MEMBRANE PROTEIN, cysteinyl; HET: 1PE, ZLK, OLA, OLC; 2.53A {Homo sapiens}
39285 Probab=39.89 E-value=4.1 Score=40.33 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=17.2 Template_Neff=12.200
39286
39287 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYA-ALLTKTNRIHRIFE 678 (908)
39288 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~-~l~~K~~ri~~if~ 678 (908)
39289 ....|.+..++..+......- .++.-.-|...+.+
39290 T Consensus 95 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~~ 130 (423)
39291 T 6RZ5_B 95 GDFLCRLSTYALYVNLYCSIFFMTAMSFFRCIAIVF 130 (423)
39292 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
39293 T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
39294 Confidence 366788877665544333222 22333345444443
39295
39296
39297 No 406
39298 >5TVN_A 5-hydroxytryptamine receptor 2B,Soluble cytochrome b562,5-hydroxytryptamine; LSD, GPCR, serotonin receptor, MEMBRANE; HET: 7LD, OLC, CLR; 2.9A {Homo sapiens}
39299 Probab=39.86 E-value=4.1 Score=39.89 Aligned_cols=34 Identities=18% Similarity=0.015 Sum_probs=17.3 Template_Neff=12.400
39300
39301 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
39302 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
39303 ....|.+..++..++.....-.+++= .-|...+.
39304 T Consensus 84 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 118 (402)
39305 T 5TVN_A 84 PLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIK 118 (402)
39306 T ss_dssp CSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39307 T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39308 Confidence 35678887776655444333333332 23444443
39309
39310
39311 No 407
39312 >5UZ7_R Guanine nucleotide-binding protein G(s) subunit; Class B G protein-coupled receptor; 4.1A {Homo sapiens}
39313 Probab=39.51 E-value=4.3 Score=41.89 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=15.2 Template_Neff=10.000
39314
39315 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLTKTN 671 (908)
39316 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~K~~ 671 (908)
39317 ...|.+..++..+.....+..+++-++
39318 T Consensus 224 ~~~C~~~~~l~~~~~~~s~~wl~~iai 250 (501)
39319 T 5UZ7_R 224 PVSCKILHFFHQYMMACNYFWMLCEGI 250 (501)
39320 T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHH
39321 Confidence 467887776665554444444444443
39322
39323
39324 No 408
39325 >6I9K_A Kumopsin1; Rhodopsin, GPCR, Light-sensitive, Retinal, MEMBRANE; HET: RET, OLC; 2.145A {Hasarius adansoni}
39326 Probab=38.98 E-value=4.4 Score=39.30 Aligned_cols=17 Identities=12% Similarity=0.123 Sum_probs=10.3 Template_Neff=12.400
39327
39328 Q NP_000836.2 645 TIICSFRRVFLGLGMCF 661 (908)
39329 Q Consensus 645 ~~~C~~~~~~~~~gf~l 661 (908)
39330 ...|.+..++..+++..
39331 T Consensus 120 ~~~c~~~~~~~~~~~~~ 136 (380)
39332 T 6I9K_A 120 PFMCELYGMIGSLFGSA 136 (380)
39333 T ss_pred HHHHHHHHHHHHHHHHH
39334 Confidence 56787776665554433
39335
39336
39337 No 409
39338 >4XNV_A P2Y purinoceptor 1, Rubredoxin; human P2Y1 receptor, G protein; HET: CLR, BUR, 1PE, OLC, Y01; 2.2A {Homo sapiens}
39339 Probab=38.66 E-value=4.5 Score=40.04 Aligned_cols=33 Identities=15% Similarity=0.288 Sum_probs=16.8 Template_Neff=12.200
39340
39341 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
39342 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
39343 ...|.+..++..+++....-.+++- .-|...+.
39344 T Consensus 120 ~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 153 (421)
39345 T 4XNV_A 120 DAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVV 153 (421)
39346 T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39347 Confidence 5678887776665544333333332 33444443
39348
39349
39350 No 410
39351 >4XNW_C P2Y purinoceptor 1, Rubredoxin; human P2Y1 receptor, G protein; HET: 2ID; 2.7A {Homo sapiens}
39352 Probab=38.66 E-value=4.5 Score=40.04 Aligned_cols=33 Identities=15% Similarity=0.288 Sum_probs=16.8 Template_Neff=12.200
39353
39354 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
39355 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
39356 ...|.+..++..+++....-.+++- .-|...+.
39357 T Consensus 120 ~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 153 (421)
39358 T 4XNW_C 120 DAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVV 153 (421)
39359 T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39360 Confidence 5678887776665544333333332 33444443
39361
39362
39363 No 411
39364 >5WB1_A Envelope protein US28,nanobody 7; chemokine receptor, MEMBRANE PROTEIN; 3.508A {Human cytomegalovirus}
39365 Probab=38.12 E-value=4.6 Score=40.62 Aligned_cols=34 Identities=15% Similarity=0.208 Sum_probs=17.1 Template_Neff=11.900
39366
39367 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
39368 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
39369 ....|.+..++..+++...+-.++.- .-|...+.
39370 T Consensus 108 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 142 (458)
39371 T 5WB1_A 108 ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIV 142 (458)
39372 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
39373 T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39374 Confidence 35678877666555444433333332 33444443
39375
39376
39377 No 412
39378 >6LI1_A G-protein coupled receptor 52,Flavodoxin,G-protein coupled; Human GPR52 receptor, Class A; HET: PGE, OLC, FMN; 2.9A {Homo sapiens}
39379 Probab=38.11 E-value=4.6 Score=40.55 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=17.9 Template_Neff=11.700
39380
39381 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
39382 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
39383 ....|.+..++..++.....-.+++ =.-|.+.+.
39384 T Consensus 95 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 129 (449)
39385 T 6LI1_A 95 ESLTCQVFGYIISVLKSVSMWCLACISVDRYLAIT 129 (449)
39386 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39387 T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39388 Confidence 4677888777665544433333333 334444444
39389
39390
39391 No 413
39392 >5UNG_B Soluble cytochrome b562,Type-2 angiotensin II; human Angiotensin II receptor complex; HET: OLC, OLA, 8ES; 2.8A {Escherichia coli}
39393 Probab=38.07 E-value=4.6 Score=39.71 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=17.1 Template_Neff=12.300
39394
39395 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRI 676 (908)
39396 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~i 676 (908)
39397 ....|.+..++..+++....-.++.- ..|...+
39398 T Consensus 189 ~~~~c~~~~~~~~~~~~~s~~~~~~ia~~R~~~i 222 (411)
39399 T 5UNG_B 189 GPVMCKVFGSFLTLNMFASIFFITCMSVDRYQSV 222 (411)
39400 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39401 T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39402 Confidence 35678887776665554433333332 2344443
39403
39404
39405 No 414
39406 >5UNF_A Soluble cytochrome b562,Type-2 angiotensin II; human Angiotensin II receptor complex; HET: 8ES; 2.8A {Escherichia coli}
39407 Probab=37.89 E-value=4.7 Score=39.75 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=14.0 Template_Neff=12.100
39408
39409 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT 668 (908)
39410 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~ 668 (908)
39411 ....|.+..++..+++....-.++.
39412 T Consensus 189 ~~~~c~~~~~~~~~~~~~s~~~~~~ 213 (411)
39413 T 5UNF_A 189 GPVMCKVFGSFLTLNMFASIFFITC 213 (411)
39414 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
39415 T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
39416 Confidence 3567887777666555444333333
39417
39418
39419 No 415
39420 >6J21_A Substance-P receptor (E.C.3.2.1.17),Endolysin; GPCR, Complex, Antagonist, signalling protein; HET: GBQ, OLC; 3.2A {Homo sapiens}
39421 Probab=37.85 E-value=4.7 Score=40.12 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=16.7 Template_Neff=12.400
39422
39423 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALL-TKTNRIHRIF 677 (908)
39424 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~-~K~~ri~~if 677 (908)
39425 ....|.+..++..++.....-.++ .=.-|...+.
39426 T Consensus 100 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~Ry~~i~ 134 (441)
39427 T 6J21_A 100 GLFYCKFHNFFPIAAVFASIWSMTAVAFDRYMAII 134 (441)
39428 T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39429 Confidence 356788877665544433332222 2334444443
39430
39431
39432 No 416
39433 >5ZHP_A Muscarinic acetylcholine receptor M3,Lysozyme,Muscarinic acetylcholine; G protein coupled receptor, MEMBRANE; HET: MAL, CIT, PG4, 9EC, P6G; 3.1A {Rattus norvegicus}
39434 Probab=37.68 E-value=4.7 Score=39.82 Aligned_cols=17 Identities=6% Similarity=0.079 Sum_probs=10.5 Template_Neff=12.100
39435
39436 Q NP_000836.2 644 DTIICSFRRVFLGLGMC 660 (908)
39437 Q Consensus 644 ~~~~C~~~~~~~~~gf~ 660 (908)
39438 ....|.+..++..+...
39439 T Consensus 81 ~~~~C~~~~~~~~~~~~ 97 (418)
39440 T 5ZHP_A 81 GNLACDLWLSIDYVASN 97 (418)
39441 T ss_dssp CHHHHHHHHHHHHHHHH
39442 T ss_pred cccHHHHHHHHHHHHHH
39443 Confidence 35678877776554443
39444
39445
39446 No 417
39447 >5NJ6_A Lysozyme,Proteinase-activated receptor 2,Soluble cytochrome b562,Proteinase-activated; MEMBRANE PROTEIN, GPCR, 7TM; 4.0A {Homo sapiens}
39448 Probab=37.61 E-value=4.7 Score=40.08 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=16.8 Template_Neff=12.200
39449
39450 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
39451 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
39452 ....|.+..++..+......-.+++ =.-|...+.
39453 T Consensus 91 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 125 (437)
39454 T 5NJ6_A 91 GEALCNVLIGFFYANMYCSILFLTCLSVQRAWEIV 125 (437)
39455 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39456 T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39457 Confidence 3567888776655544333333322 333444443
39458
39459
39460 No 418
39461 >5DSG_B Muscarinic acetylcholine receptor M4,Endolysin,Muscarinic acetylcholine; Membrane, GPCR, Signaling, Antagonist, MEMBRANE; HET: P6G, OLC, 0HK, PG6, EDT, OLA; 2.6A {Homo sapiens}
39462 Probab=37.28 E-value=4.8 Score=39.81 Aligned_cols=17 Identities=6% Similarity=0.130 Sum_probs=10.4 Template_Neff=12.100
39463
39464 Q NP_000836.2 644 DTIICSFRRVFLGLGMC 660 (908)
39465 Q Consensus 644 ~~~~C~~~~~~~~~gf~ 660 (908)
39466 ....|.+..++..+++.
39467 T Consensus 82 ~~~~C~~~~~~~~~~~~ 98 (422)
39468 T 5DSG_B 82 GAVVCDLWLALDYVVSN 98 (422)
39469 T ss_dssp HHHHHHHHHHHHHHHHH
39470 T ss_pred cHHHHHHHHHHHHHHHH
39471 Confidence 36678877776554443
39472
39473
39474 No 419
39475 >4Z36_A Lysophosphatidic Acid Receptor 1, cytochrome; human lysophosphatidic acid receptor 1; HET: 1WV, ON3; 2.9A {Homo sapiens}
39476 Probab=37.22 E-value=4.9 Score=40.64 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=15.9 Template_Neff=11.200
39477
39478 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSY-AALLTKTNRIHRIFE 678 (908)
39479 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~-~~l~~K~~ri~~if~ 678 (908)
39480 ...|.+..++..+...... ..++.-.-|.+.+.+
39481 T Consensus 136 ~~~c~~~~~l~~~~~~~s~~~l~~isidRy~aI~~ 170 (459)
39482 T 4Z36_A 136 VSTWLLRQGLIDTSLTASVANLLAIAIERHITVFR 170 (459)
39483 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
39484 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHc
39485 Confidence 4578777666554333222 222233345544443
39486
39487
39488 No 420
39489 >6PT0_R Cannabinoid receptor 2, Guanine nucleotide-binding; GPCR complex, WIN55, 212-2, MEMBRANE; HET: WI5, CLR, PLM; 3.2A {Homo sapiens}
39490 Probab=36.97 E-value=4.9 Score=38.72 Aligned_cols=12 Identities=0% Similarity=-0.097 Sum_probs=5.9 Template_Neff=12.300
39491
39492 Q NP_000836.2 645 TIICSFRRVFLG 656 (908)
39493 Q Consensus 645 ~~~C~~~~~~~~ 656 (908)
39494 ...|....++..
39495 T Consensus 103 ~~~~~~~~~~~~ 114 (369)
39496 T 6PT0_R 103 KAVFLLKIGSVT 114 (369)
39497 T ss_dssp HHHHHHHHHHHH
39498 T ss_pred HHHHHHHHHHHH
39499 Confidence 445655554443
39500
39501
39502 No 421
39503 >6OIJ_R Guanine nucleotide-binding protein G(i) subunit; G-protein coupled receptor-G-protein complex, neurotransmitter; HET: Y01, IXO; 3.3A {Homo sapiens}
39504 Probab=36.53 E-value=5.1 Score=38.43 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=16.6 Template_Neff=12.500
39505
39506 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
39507 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
39508 ....|.+..++..+++....-.++. -.-|...+.
39509 T Consensus 103 ~~~~c~~~~~~~~~~~~~s~~~~~~i~~~R~~~i~ 137 (363)
39510 T 6OIJ_R 103 GTLACDLWLALDYVASQASVMNLLLISFDRYFSVT 137 (363)
39511 T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39512 Confidence 3567877766655444433333322 233444444
39513
39514
39515 No 422
39516 >4Z35_A Lysophosphatidic Acid Receptor 1, cytochrome; human lysophosphatidic acid receptor 1; HET: ON9, 1WV; 2.9A {Homo sapiens}
39517 Probab=36.39 E-value=5.1 Score=40.54 Aligned_cols=14 Identities=7% Similarity=0.083 Sum_probs=8.0 Template_Neff=11.200
39518
39519 Q NP_000836.2 645 TIICSFRRVFLGLG 658 (908)
39520 Q Consensus 645 ~~~C~~~~~~~~~g 658 (908)
39521 ...|.+..++..++
39522 T Consensus 136 ~~~c~~~~~l~~~~ 149 (464)
39523 T 4Z35_A 136 VSTWLLRQGLIDTS 149 (464)
39524 T ss_pred HHHHHHHHHHHHHH
39525 Confidence 45677666554443
39526
39527
39528 No 423
39529 >6KR8_A beta 2 adrenergic receptor; G-protein coupled receptor, b2AR, full; NMR {Homo sapiens}
39530 Probab=36.37 E-value=5.1 Score=37.80 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=16.9 Template_Neff=12.600
39531
39532 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALL-TKTNRIHRIF 677 (908)
39533 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~-~K~~ri~~if 677 (908)
39534 ....|.+..++..+++....-.++ .-..|...+.
39535 T Consensus 79 ~~~~c~~~~~~~~~~~~~s~~~~~~ia~~R~~~i~ 113 (336)
39536 T 6KR8_A 79 GNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAIC 113 (336)
39537 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
39538 T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
39539 Confidence 356788777766554433333222 2334444443
39540
39541
39542 No 424
39543 >6IIU_A Soluble cytochrome b562,Thromboxane A2 receptor,Rubredoxin,Thromboxane; GPCR, Complex, Antagonist, SIGNALING PROTEIN; HET: CLR, A8X, OLC; 2.5A {Escherichia coli}
39544 Probab=36.22 E-value=5.2 Score=40.63 Aligned_cols=24 Identities=4% Similarity=0.173 Sum_probs=11.7 Template_Neff=11.800
39545
39546 Q NP_000836.2 585 VVPVFVAILGIIATTFVIVTFVRY 608 (908)
39547 Q Consensus 585 ~~~~~~~~~~i~~~~~~~~~~~~~ 608 (908)
39548 ++..++.++|++..++.++.+...
39549 T Consensus 136 ~~~~~~~~lgi~~N~~~l~~~~~~ 159 (484)
39550 T 6IIU_A 136 WFAASFCVVGLASNLLALSVLAGA 159 (484)
39551 T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
39552 Confidence 444455555655554444444433
39553
39554
39555 No 425
39556 >6IIV_A Soluble cytochrome b562,Thromboxane A2 receptor,Rubredoxin,Thromboxane; GPCR, Complex, Antagonist, SIGNALING PROTEIN; HET: CLR, A90; 3.0A {Escherichia coli}
39557 Probab=36.22 E-value=5.2 Score=40.63 Aligned_cols=24 Identities=4% Similarity=0.173 Sum_probs=11.7 Template_Neff=11.800
39558
39559 Q NP_000836.2 585 VVPVFVAILGIIATTFVIVTFVRY 608 (908)
39560 Q Consensus 585 ~~~~~~~~~~i~~~~~~~~~~~~~ 608 (908)
39561 ++..++.++|++..++.++.+...
39562 T Consensus 136 ~~~~~~~~lgi~~N~~~l~~~~~~ 159 (484)
39563 T 6IIV_A 136 WFAASFCVVGLASNLLALSVLAGA 159 (484)
39564 T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
39565 Confidence 444455555655554444444433
39566
39567
39568 No 426
39569 >6E3Y_R Calcitonin gene-related peptide 1, Nanobody; class B G protein-coupled receptor; 3.3A {Lama glama}
39570 Probab=36.12 E-value=5.2 Score=41.00 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=13.8 Template_Neff=10.200
39571
39572 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT 668 (908)
39573 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~ 668 (908)
39574 ....|.+..++..+.....+.-+++
39575 T Consensus 218 ~~~~C~~~~~l~~~~~~as~~wl~~ 242 (490)
39576 T 6E3Y_R 218 NPVSCKVSQFIHLYLMGCNYFWMLC 242 (490)
39577 T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
39578 T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHH
39579 Confidence 3577887776655544443333333
39580
39581
39582 No 427
39583 >6UUN_R Guanine nucleotide-binding protein G(s) subunit; GPCR, adrenomedullin receptor complex, MEMBRANE;{Homo sapiens}
39584 Probab=36.12 E-value=5.2 Score=41.00 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=13.8 Template_Neff=10.200
39585
39586 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT 668 (908)
39587 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~ 668 (908)
39588 ....|.+..++..+.....+.-+++
39589 T Consensus 218 ~~~~C~~~~~l~~~~~~as~~wl~~ 242 (490)
39590 T 6UUN_R 218 NPVSCKVSQFIHLYLMGCNYFWMLC 242 (490)
39591 T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
39592 T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHH
39593 Confidence 3577887776655544443333333
39594
39595
39596 No 428
39597 >6M1I_A Ribonuclease 3 (E.C.3.1.26.3), Microprocessor complex; GPCR, PROTEIN BINDING; 3.5A {Homo sapiens}
39598 Probab=35.51 E-value=5.4 Score=39.54 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=17.2 Template_Neff=10.700
39599
39600 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTKTN 671 (908)
39601 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K~~ 671 (908)
39602 ....|.+..++..++....+..+++-++
39603 T Consensus 184 ~~~~C~~~~~~~~~~~~~s~~~l~~ia~ 211 (406)
39604 T 6M1I_A 184 STVECKAVMVFFHYCVVSNYFWLFIEGL 211 (406)
39605 T ss_dssp CCSHHHHHHHHHHHHHHTTTTTTHHHHH
39606 T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH
39607 Confidence 3578888877766655555555554443
39608
39609
39610 No 429
39611 >4XT1_A US28, CX3CL1, nanobody 7; GPCR, chemokine, membrane protein, complex; HET: CLR, UNL, OLC; 2.886A {Cytomegalovirus}
39612 Probab=35.42 E-value=5.4 Score=38.30 Aligned_cols=35 Identities=14% Similarity=0.192 Sum_probs=17.1 Template_Neff=12.200
39613
39614 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIFE 678 (908)
39615 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if~ 678 (908)
39616 ....|.+..++...++....-.++. -.-|...+.+
39617 T Consensus 108 ~~~~C~~~~~~~~~~~~~s~~~~~~i~~~R~~~i~~ 143 (362)
39618 T 4XT1_A 108 ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY 143 (362)
39619 T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
39620 T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
39621 Confidence 3567877766655444433333332 3345444443
39622
39623
39624 No 430
39625 >6LW5_A N-formyl peptide receptor 2,Soluble cytochrome; Formyl peptide receptor, G protein-coupled; HET: CLR; 2.8A {Escherichia coli}
39626 Probab=35.22 E-value=5.5 Score=39.58 Aligned_cols=18 Identities=11% Similarity=0.361 Sum_probs=10.6 Template_Neff=11.700
39627
39628 Q NP_000836.2 645 TIICSFRRVFLGLGMCFS 662 (908)
39629 Q Consensus 645 ~~~C~~~~~~~~~gf~l~ 662 (908)
39630 ...|.+..++..+++...
39631 T Consensus 200 ~~~C~~~~~~~~~~~~~s 217 (427)
39632 T 6LW5_A 200 WFLCKLIHIVVDINLFGS 217 (427)
39633 T ss_dssp HHHHHHHHHHHHHHHHHH
39634 T ss_pred ccHHHHHHHHHHHHHHHH
39635 Confidence 456877776655444433
39636
39637
39638 No 431
39639 >5VBL_B agonist peptide,Rubredoxin-Apelin receptor chimera; human apelin receptor complex, agonist; HET: ALC, OLC, 200, HRG, OIC; 2.6A {Homo sapiens}
39640 Probab=34.87 E-value=5.6 Score=39.04 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=17.0 Template_Neff=12.100
39641
39642 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
39643 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
39644 ....|.+..++..+.+....-.++.- .-|...+.
39645 T Consensus 116 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 150 (407)
39646 T 5VBL_B 116 GTFFCKLSSYLIFVNMYASAFCLTGLSFDRYLAIV 150 (407)
39647 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
39648 T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39649 Confidence 35678887766655444333333332 33444443
39650
39651
39652 No 432
39653 >5V54_B OB-1 fused 5-HT1b receptor; 5-hydroxytryptamine, GPCR antagonist, OB1, ELECTRON; HET: 89F; 3.9A {Homo sapiens}
39654 Probab=34.66 E-value=5.7 Score=38.71 Aligned_cols=34 Identities=18% Similarity=0.068 Sum_probs=16.9 Template_Neff=12.300
39655
39656 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
39657 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
39658 ....|.+..++..++.....-.+++ =.-|...+.
39659 T Consensus 82 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 116 (395)
39660 T 5V54_B 82 GQVVCDFWLSSDITCCTASIWHLCVIALDRYWAIT 116 (395)
39661 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
39662 T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39663 Confidence 3567888777655444333333333 233444443
39664
39665
39666 No 433
39667 >5WB2_A Envelope protein US28,nanobody 7, CX3CL1; chemokine receptor, engineered proteins, MEMBRANE; HET: YCM, MES, CLR, OLC; 3.5A {Human cytomegalovirus}
39668 Probab=34.21 E-value=5.8 Score=39.81 Aligned_cols=34 Identities=15% Similarity=0.208 Sum_probs=17.1 Template_Neff=11.900
39669
39670 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
39671 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
39672 ....|.+..++..+++....-.++.- .-|...+.
39673 T Consensus 107 ~~~~C~~~~~~~~~~~~~s~~~~~~ia~~R~~~i~ 141 (460)
39674 T 5WB2_A 107 ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIV 141 (460)
39675 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
39676 T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
39677 Confidence 35678877766655444333333332 33444443
39678
39679
39680 No 434
39681 >6IBB_A Succinate receptor 1, Nanobody6; SUCNR1 GPR91 GPCR G-Protein coupled; HET: GOL, OLC, CLR, H95; 2.12A {Rattus norvegicus}
39682 Probab=33.17 E-value=6.2 Score=37.34 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=17.1 Template_Neff=12.400
39683
39684 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
39685 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
39686 ....|.+..++....+....-.++. -..|...+.
39687 T Consensus 94 ~~~~c~~~~~~~~~~~~~s~~~~~~ia~~R~~~i~ 128 (342)
39688 T 6IBB_A 94 GDVLCISNRYVLHANLYTSILFLTFISIDRYLLMK 128 (342)
39689 T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39690 Confidence 3567887776665544333333333 234444443
39691
39692
39693 No 435
39694 >4GBR_A Beta-2 adrenergic receptor, Lysozyme (E.C.3.2.1.17); 7 transmembrane helices, G-protein coupled; HET: CAU; 3.993A {Homo sapiens}
39695 Probab=32.99 E-value=6.3 Score=36.36 Aligned_cols=17 Identities=18% Similarity=0.247 Sum_probs=10.3 Template_Neff=12.900
39696
39697 Q NP_000836.2 644 DTIICSFRRVFLGLGMC 660 (908)
39698 Q Consensus 644 ~~~~C~~~~~~~~~gf~ 660 (908)
39699 ....|....++...+..
39700 T Consensus 74 ~~~~c~~~~~~~~~~~~ 90 (309)
39701 T 4GBR_A 74 GNFWCEFWTSIDVLCVT 90 (309)
39702 T ss_pred chhHHHHHHHHHHHHHH
39703 Confidence 35678777766554443
39704
39705
39706 No 436
39707 >6NBF_R Parathyroid hormone/parathyroid hormone-related peptide receptor; Parathyroid hormone receptor, GPCR, Class; HET: CLR, PLM; 3.0A {Homo sapiens}
39708 Probab=32.16 E-value=6.7 Score=40.00 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=17.2 Template_Neff=9.800
39709
39710 Q NP_000836.2 646 IICSFRRVFLGLGMCFSYAALLTKTNRIH 674 (908)
39711 Q Consensus 646 ~~C~~~~~~~~~gf~l~~~~l~~K~~ri~ 674 (908)
39712 ..|.+...+...+....+.-+++-.+-.|
39713 T Consensus 253 ~~C~~~~~l~~~~~~~s~~wl~~~al~~~ 281 (478)
39714 T 6NBF_R 253 AGCRVAVTFFLYFLATNYYWILVEGLYLH 281 (478)
39715 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39716 Confidence 67888777766665555555555444333
39717
39718
39719 No 437
39720 >6NBH_R Parathyroid hormone/parathyroid hormone-related peptide receptor; Parathyroid hormone receptor, GPCR, Class; HET: CLR, PLM; 3.5A {Homo sapiens}
39721 Probab=32.16 E-value=6.7 Score=40.00 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=17.2 Template_Neff=9.800
39722
39723 Q NP_000836.2 646 IICSFRRVFLGLGMCFSYAALLTKTNRIH 674 (908)
39724 Q Consensus 646 ~~C~~~~~~~~~gf~l~~~~l~~K~~ri~ 674 (908)
39725 ..|.+...+...+....+.-+++-.+-.|
39726 T Consensus 253 ~~C~~~~~l~~~~~~~s~~wl~~~al~~~ 281 (478)
39727 T 6NBH_R 253 AGCRVAVTFFLYFLATNYYWILVEGLYLH 281 (478)
39728 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39729 Confidence 67888777766665555555555444333
39730
39731
39732 No 438
39733 >6LML_R Guanine nucleotide-binding protein G(i) subunit; glucagon receptor, GPCR, Gi1 protein;{Homo sapiens}
39734 Probab=31.93 E-value=6.8 Score=39.09 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=22.0 Template_Neff=10.300
39735
39736 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLTKTNRIHRIFE 678 (908)
39737 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~K~~ri~~if~ 678 (908)
39738 ...|.+..++........+.-+++-.+-+++.+.
39739 T Consensus 195 ~~~C~~~~~~~~~~~~~s~~w~~~~~~~l~~~i~ 228 (422)
39740 T 6LML_R 195 VAGCRVAAVFMQYGIVANYCWLLVEGLYLHNLLG 228 (422)
39741 T ss_dssp CTHHHHHHHHHHHHTTTTTTHHHHHHHHHHHHTT
39742 T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39743 Confidence 4788888777776666666666665555555443
39744
39745
39746 No 439
39747 >6WHC_R Guanine nucleotide-binding protein G(s) subunit; GPCR, receptor complex, MEMBRANE PROTEIN;{Homo sapiens}
39748 Probab=31.83 E-value=6.8 Score=39.91 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=22.5 Template_Neff=9.900
39749
39750 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLTKTNRIHRIFE 678 (908)
39751 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~K~~ri~~if~ 678 (908)
39752 ...|.+..++........+.-+++-.+-+|+...
39753 T Consensus 221 ~~~C~~~~~~~~~~~~~s~~wl~~~~l~l~~~i~ 254 (477)
39754 T 6WHC_R 221 VAGCRVAAVFMQYGIVANYCWLLVEGLYLHNLLG 254 (477)
39755 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39756 T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39757 Confidence 3688888877777666666666666655555443
39758
39759
39760 No 440
39761 >6LI2_A G-protein coupled receptor 52,Rubredoxin,G-protein coupled; Human GPR52 receptor, Class A; HET: OLC; 2.8A {Homo sapiens}
39762 Probab=31.69 E-value=6.8 Score=37.61 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=17.6 Template_Neff=12.400
39763
39764 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
39765 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
39766 ....|.+..++..+.+....-.++. =.-|...+.
39767 T Consensus 95 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 129 (372)
39768 T 6LI2_A 95 ESLTCQVFGYIISVLKSVSMWCLACISVDRYLAIT 129 (372)
39769 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39770 T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
39771 Confidence 3567888777766544433333333 334444444
39772
39773
39774 No 441
39775 >4L6R_A Soluble cytochrome b562 and Glucagon; Human glucagon receptor, diabetes, GPCR; 3.3A {Escherichia coli, Homo sapiens}
39776 Probab=31.23 E-value=7.1 Score=38.95 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=21.3 Template_Neff=10.500
39777
39778 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLTKTNRIHRIFE 678 (908)
39779 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~K~~ri~~if~ 678 (908)
39780 ...|.+..++..++....+.-+++-.+-++..+.
39781 T Consensus 205 ~~~C~~~~~~~~~~~las~~w~~~i~~~~~~~~~ 238 (425)
39782 T 4L6R_A 205 VAGCRVAAVFMQYGIVANYCWLLVEGLYLHNLLG 238 (425)
39783 T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
39784 Confidence 5678887777766665555555555555555444
39785
39786
39787 No 442
39788 >6KUW_A Alpha-2C adrenergic receptor; Alpha2c adrenergic receptor, antagonist, GPCR; HET: OLC, OLA, CLR, E33; 2.8A {Homo sapiens}
39789 Probab=31.07 E-value=7.1 Score=39.70 Aligned_cols=17 Identities=12% Similarity=-0.062 Sum_probs=10.6 Template_Neff=11.600
39790
39791 Q NP_000836.2 644 DTIICSFRRVFLGLGMC 660 (908)
39792 Q Consensus 644 ~~~~C~~~~~~~~~gf~ 660 (908)
39793 ....|.+..++..+...
39794 T Consensus 92 ~~~~C~~~~~~~~~~~~ 108 (496)
39795 T 6KUW_A 92 GQWWCGVYLALDVLFCT 108 (496)
39796 T ss_dssp HHHHHHHHHHHHHHHHH
39797 T ss_pred chhHHHHHHHHHHHHHH
39798 Confidence 36678887776554443
39799
39800
39801 No 443
39802 >4WW3_A BOG; Animals, Decapodiformes, Inositol 1, 4; HET: TWT, PC1, PLM, BOG, RET; 2.8A {Todarodes pacificus}
39803 Probab=30.81 E-value=7.2 Score=36.86 Aligned_cols=17 Identities=12% Similarity=0.038 Sum_probs=10.5 Template_Neff=12.700
39804
39805 Q NP_000836.2 644 DTIICSFRRVFLGLGMC 660 (908)
39806 Q Consensus 644 ~~~~C~~~~~~~~~gf~ 660 (908)
39807 ....|.+..++..++..
39808 T Consensus 96 ~~~~c~~~~~~~~~~~~ 112 (350)
39809 T 4WW3_A 96 GFAACKVYGFIGGIFGF 112 (350)
39810 T ss_dssp HHHHHHHHHHHHHHHHH
39811 T ss_pred CchHHHHHHHHHHHHHH
39812 Confidence 35678777766554443
39813
39814
39815 No 444
39816 >6J20_A Substance-P receptor,Endolysin (E.C. 3.2.1.17); GPCR, Complex, Antagonist, signalling protein; HET: GBQ; 2.7A {Homo sapiens}
39817 Probab=30.61 E-value=7.3 Score=38.58 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=17.0 Template_Neff=12.300
39818
39819 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALL-TKTNRIHRIF 677 (908)
39820 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~-~K~~ri~~if 677 (908)
39821 ....|.+..++..+......-.++ .=.-|...+.
39822 T Consensus 100 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~Ry~~i~ 134 (441)
39823 T 6J20_A 100 GLFYCKFHNFFPIAAVFASIWSMTAVAFDRYMAII 134 (441)
39824 T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
39825 Confidence 356788877766544433333322 2334444444
39826
39827
39828 No 445
39829 >5YWY_A Prostaglandin E2 receptor EP4 subtype; G-protein coupled receptor, lipid mediator; HET: 7UR; 3.2A {Homo sapiens}
39830 Probab=30.60 E-value=7.3 Score=36.50 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=16.9 Template_Neff=12.600
39831
39832 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
39833 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
39834 ....|.+..++..+.+....-.++. -.-|...+.
39835 T Consensus 88 ~~~~c~~~~~~~~~~~~~s~~~~~~is~~R~~~i~ 122 (332)
39836 T 5YWY_A 88 GQPLCEYSTFILLFFSLSRLSIICAMSVERYLAIN 122 (332)
39837 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39838 T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39839 Confidence 3567888776665544433333322 233444443
39840
39841
39842 No 446
39843 >4JKV_A Soluble cytochrome b562, Smoothened homolog; Human smoothened receptor, antitumor agent; HET: 1KS, PG4, PGE, OLA, PEG, OLC; 2.45A {Escherichia coli}
39844 Probab=30.35 E-value=7.5 Score=39.54 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=19.3 Template_Neff=9.900
39845
39846 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTKTNRIHRIF 677 (908)
39847 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K~~ri~~if 677 (908)
39848 ....|.+..++..+++...+.-+++-++-++..+
39849 T Consensus 230 ~~~~C~~~~~l~~~~~las~~w~~~~a~~~~~~i 263 (475)
39850 T 4JKV_A 230 ETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSF 263 (475)
39851 T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39852 T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39853 Confidence 3567887777766665555554444444444433
39854
39855
39856 No 447
39857 >4N4W_A Smoothened homolog; Human smoothened receptor, antitumor agent; HET: MAN, BMA, SNT, PG4, NAG, OLC; 2.8A {Homo sapiens, Shigella flexneri}
39858 Probab=30.35 E-value=7.5 Score=39.54 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=19.3 Template_Neff=9.900
39859
39860 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTKTNRIHRIF 677 (908)
39861 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K~~ri~~if 677 (908)
39862 ....|.+..++..+++...+.-+++-++-++..+
39863 T Consensus 230 ~~~~C~~~~~l~~~~~las~~w~~~~a~~~~~~i 263 (475)
39864 T 4N4W_A 230 ETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSF 263 (475)
39865 T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG
39866 T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39867 Confidence 3567887777766665555554444444444433
39868
39869
39870 No 448
39871 >6FJ3_A Parathyroid hormone/parathyroid hormone-related peptide receptor; GPCR, cell signalling, 7TM, MEMBRANE; HET: FUC, OLA, NAG, MAN, YCM, PG4, HRG, BMA; 2.5A {Homo sapiens}
39872 Probab=30.23 E-value=7.5 Score=41.02 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=21.0 Template_Neff=10.000
39873
39874 Q NP_000836.2 646 IICSFRRVFLGLGMCFSYAALLTKTNRIHRIFE 678 (908)
39875 Q Consensus 646 ~~C~~~~~~~~~gf~l~~~~l~~K~~ri~~if~ 678 (908)
39876 ..|.+..+++...+...|.=+++-.+-+|+.+.
39877 T Consensus 214 ~~C~~~~~~~~y~~la~~~Wm~~e~~~l~~~i~ 246 (602)
39878 T 6FJ3_A 214 AGCRVAVTFFLYFLATNYYWIAVEGLYLHSLIF 246 (602)
39879 T ss_dssp -HHH-HHHH--HHHHHHHHHHHHHHHHHHHHHH
39880 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39881 Confidence 678888888777777777777777766666544
39882
39883
39884 No 449
39885 >5ZBH_A Neuropeptide Y receptor type 1,T4; G Protein-Coupled Receptor Neuropeptide Y; HET: 9AF; 3.0A {Homo sapiens}
39886 Probab=29.80 E-value=7.7 Score=39.78 Aligned_cols=17 Identities=6% Similarity=0.305 Sum_probs=10.6 Template_Neff=11.700
39887
39888 Q NP_000836.2 644 DTIICSFRRVFLGLGMC 660 (908)
39889 Q Consensus 644 ~~~~C~~~~~~~~~gf~ 660 (908)
39890 ....|.+..++..+.+.
39891 T Consensus 118 ~~~~C~~~~~~~~~~~~ 134 (527)
39892 T 5ZBH_A 118 GEAMCKLNPFVQCVSIT 134 (527)
39893 T ss_pred hHHHHHHHHHHHHHHHH
39894 Confidence 35678887766554443
39895
39896
39897 No 450
39898 >6NIY_R Adenosine receptor A1,Soluble cytochrome b562,Adenosine; GPCR, transmembrane, receptor, calcitonin, MEMBRANE;{Homo sapiens}
39899 Probab=29.59 E-value=7.9 Score=39.32 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=15.1 Template_Neff=10.300
39900
39901 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLTKTN 671 (908)
39902 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~K~~ 671 (908)
39903 ...|.+..++..+.....+.-+++-++
39904 T Consensus 216 ~~~C~~~~~l~~~~~~~s~~w~~~ia~ 242 (474)
39905 T 6NIY_R 216 PVSCKILHFFHQYMMACNYFWMLCEGI 242 (474)
39906 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
39907 Confidence 567887776665554444444444443
39908
39909
39910 No 451
39911 >5XJM_A Type-2 angiotensin II receptor,Soluble cytochrome; class A GPCR, regulate human; 3.2A {Mus musculus}
39912 Probab=29.03 E-value=8.1 Score=37.87 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=17.6 Template_Neff=12.400
39913
39914 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
39915 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
39916 ....|.+..++..++.....-.+++ -.-|...+.
39917 T Consensus 80 ~~~~C~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 114 (422)
39918 T 5XJM_A 80 GPVMCKVFGSFLTLNMFASIFFITCMSVDRYQSVI 114 (422)
39919 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39920 T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39921 Confidence 3567888877766554433333332 233444443
39922
39923
39924 No 452
39925 >6VMS_R Guanine nucleotide-binding protein G(i) subunit; Dopamine, Dopamine receptor, GPCR, G; HET: 08Y; 3.8A {Rattus norvegicus}
39926 Probab=28.87 E-value=8.2 Score=38.63 Aligned_cols=16 Identities=13% Similarity=0.044 Sum_probs=9.8 Template_Neff=11.300
39927
39928 Q NP_000836.2 645 TIICSFRRVFLGLGMC 660 (908)
39929 Q Consensus 645 ~~~C~~~~~~~~~gf~ 660 (908)
39930 ...|.+..++..+++.
39931 T Consensus 245 ~~~C~~~~~~~~~~~~ 260 (450)
39932 T 6VMS_R 245 RIHCDIFVTLDVMMCT 260 (450)
39933 T ss_dssp TTHHHHHHHHHHHHHH
39934 T ss_pred hHHHHHHHHHHHHHHH
39935 Confidence 5678777766554443
39936
39937
39938 No 453
39939 >6PS2_A Fusion protein of Beta-2 adrenergic; GPCR, COMPLEX-LCP method, SBDD, drug; HET: CLR, SO4, JTZ, OLB, OLA, OLC; 2.4A {Homo sapiens}
39940 Probab=28.33 E-value=8.5 Score=39.39 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=16.6 Template_Neff=10.700
39941
39942 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYA-ALLTKTNRIHRIF 677 (908)
39943 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~-~l~~K~~ri~~if 677 (908)
39944 ....|.+..++..++.....- .++.=.-|.+.+.
39945 T Consensus 126 ~~~~C~~~~~l~~~~~~~s~~~~~~iai~Ry~ai~ 160 (506)
39946 T 6PS2_A 126 GNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAIT 160 (506)
39947 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
39948 T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
39949 Confidence 356788777765544433222 2233334544443
39950
39951
39952 No 454
39953 >6PB0_R Corticotropin-releasing factor receptor 1, Urocortin; Corticotropin-releasing factor 1 receptor, urocortins1; HET: CLR, PLM; 3.0A {Homo sapiens}
39954 Probab=28.25 E-value=8.6 Score=37.30 Aligned_cols=28 Identities=4% Similarity=-0.014 Sum_probs=17.0 Template_Neff=11.200
39955
39956 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTKTN 671 (908)
39957 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K~~ 671 (908)
39958 ....|.+..++...+....+..+++-.+
39959 T Consensus 161 ~~~~C~~~~~~~~~~~~~s~~~l~~ia~ 188 (375)
39960 T 6PB0_R 161 NVGWCRLVTAAYNYFHVTNFFWMFGEGC 188 (375)
39961 T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHH
39962 T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHH
39963 Confidence 3567888777766655555555555443
39964
39965
39966 No 455
39967 >3PDS_A Fusion protein Beta-2 adrenergic receptor/Lysozyme; GPCR, signaling, beta adrenergic agonist; HET: ERC, CLR, SO4; 3.5A {Homo sapiens,Enterobacteria phage T4,Homo sapiens}
39968 Probab=28.08 E-value=8.7 Score=38.53 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=16.1 Template_Neff=11.400
39969
39970 Q NP_000836.2 645 TIICSFRRVFLGLGMCF-SYAALLTKTNRIHRIF 677 (908)
39971 Q Consensus 645 ~~~C~~~~~~~~~gf~l-~~~~l~~K~~ri~~if 677 (908)
39972 ...|.+..++..++... .+..++.=.-|.+.+.
39973 T Consensus 79 ~~~c~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 112 (458)
39974 T 3PDS_A 79 NFWCEFWTSIDVLCVTASIETLCVIAVDRYFAIT 112 (458)
39975 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
39976 T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
39977 Confidence 56787777665544332 2223333334544443
39978
39979
39980 No 456
39981 >5UEN_B Adenosine receptor A1,Soluble cytochrome b562,Adenosine; GPCR, transmembrane, receptor, adenosine, MEMBRANE; HET: OLA, DU1; 3.2A {Homo sapiens}
39982 Probab=27.53 E-value=9 Score=37.51 Aligned_cols=16 Identities=6% Similarity=-0.155 Sum_probs=9.6 Template_Neff=12.200
39983
39984 Q NP_000836.2 645 TIICSFRRVFLGLGMC 660 (908)
39985 Q Consensus 645 ~~~C~~~~~~~~~gf~ 660 (908)
39986 ...|.+..++..+.+.
39987 T Consensus 78 ~~~C~~~~~~~~~~~~ 93 (416)
39988 T 5UEN_B 78 FHTCLMVACPVLILTQ 93 (416)
39989 T ss_dssp HHHHHHHHHHHHHHHH
39990 T ss_pred cchhHHHHHHHHHHHH
39991 Confidence 4578777766554443
39992
39993
39994 No 457
39995 >5ZBQ_A Neuropeptide Y Y1 receptor in; G Protein-Coupled Receptor, Receptor Inhibitor; HET: 9AO; 2.7A {Homo sapiens}
39996 Probab=27.31 E-value=9.1 Score=39.21 Aligned_cols=20 Identities=10% Similarity=0.287 Sum_probs=11.7 Template_Neff=11.500
39997
39998 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSY 663 (908)
39999 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~ 663 (908)
40000 ....|.+..++..+++....
40001 T Consensus 108 ~~~~C~~~~~~~~~~~~~s~ 127 (525)
40002 T 5ZBQ_A 108 GEAMCKLNPFVQCVSITVSI 127 (525)
40003 T ss_pred hHHHHHHHHHHHHHHHHHHH
40004 Confidence 35678877766655544333
40005
40006
40007 No 458
40008 >6RNK_A Succinate receptor 1, Nanobody6; SUCNR1, GPR91, GPCR, G-Protein coupled; HET: KAZ, OLC; 1.94A {Rattus norvegicus}
40009 Probab=27.26 E-value=9.1 Score=36.04 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=16.7 Template_Neff=12.400
40010
40011 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLT-KTNRIHRIF 677 (908)
40012 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~-K~~ri~~if 677 (908)
40013 ....|.+..++...++....-.++. -.-|...+.
40014 T Consensus 94 ~~~~c~~~~~~~~~~~~~s~~~~~~i~~~R~~~i~ 128 (342)
40015 T 6RNK_A 94 GDVLCISNRYVLHANLYTSILFLTFISIDRYLLMK 128 (342)
40016 T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
40017 Confidence 3567877776665544433333332 233444443
40018
40019
40020 No 459
40021 >5UEN_A Adenosine receptor A1,Soluble cytochrome b562,Adenosine; GPCR, transmembrane, receptor, adenosine, MEMBRANE; HET: DU1, OLA; 3.2A {Homo sapiens}
40022 Probab=27.12 E-value=9.2 Score=37.37 Aligned_cols=16 Identities=6% Similarity=-0.155 Sum_probs=9.6 Template_Neff=12.300
40023
40024 Q NP_000836.2 645 TIICSFRRVFLGLGMC 660 (908)
40025 Q Consensus 645 ~~~C~~~~~~~~~gf~ 660 (908)
40026 ...|.+..++..++..
40027 T Consensus 78 ~~~C~~~~~~~~~~~~ 93 (416)
40028 T 5UEN_A 78 FHTCLMVACPVLILTQ 93 (416)
40029 T ss_dssp HHHHHHHHHHHHHHHH
40030 T ss_pred cchhHHHHHHHHHHHH
40031 Confidence 4578777766554443
40032
40033
40034 No 460
40035 >6PB1_P Corticotropin-releasing factor receptor 2, Urocortin; Corticotropin-releasing factor 2 receptor, urocortins1; HET: CLR, PLM; 2.8A {Homo sapiens}
40036 Probab=26.87 E-value=9.4 Score=37.30 Aligned_cols=33 Identities=6% Similarity=0.185 Sum_probs=20.5 Template_Neff=10.700
40037
40038 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTKTNRIHRI 676 (908)
40039 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K~~ri~~i 676 (908)
40040 ....|.+..++...+....+..+++-.+-.|..
40041 T Consensus 179 ~~~~C~~~~~~~~~~~~~s~~~l~~ia~~ry~~ 211 (387)
40042 T 6PB1_P 179 NEVWCRCITTIFNYFVVTNFFWMFVEGCYLHTA 211 (387)
40043 T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
40044 T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
40045 Confidence 457888887777666665555555555444433
40046
40047
40048 No 461
40049 >6OMM_R N-formyl peptide receptor 2, Peptide; Formyl peptide receptor 2/lipoxin A4; HET: PLM, CLR; 3.17A {Homo sapiens}
40050 Probab=26.55 E-value=9.6 Score=36.23 Aligned_cols=16 Identities=6% Similarity=0.468 Sum_probs=9.9 Template_Neff=12.500
40051
40052 Q NP_000836.2 645 TIICSFRRVFLGLGMC 660 (908)
40053 Q Consensus 645 ~~~C~~~~~~~~~gf~ 660 (908)
40054 ...|.+..++..+++.
40055 T Consensus 116 ~~~c~~~~~~~~~~~~ 131 (363)
40056 T 6OMM_R 116 WFLCKLIHIVVDINLF 131 (363)
40057 T ss_dssp HHHHHHHHHHHHHHHH
40058 T ss_pred HHHHHHHHHHHHHHHH
40059 Confidence 5678777666554443
40060
40061
40062 No 462
40063 >5N2S_A Adenosine receptor A2a,Soluble cytochrome b562,Adenosine; G-PROTEIN-COUPLED RECEPTOR, INTEGRAL THERMOSTABILIZING MUTATIONS; HET: 8K8, SO4; 3.303A {Escherichia coli}
40064 Probab=26.30 E-value=9.8 Score=37.63 Aligned_cols=15 Identities=7% Similarity=-0.115 Sum_probs=8.7 Template_Neff=11.900
40065
40066 Q NP_000836.2 645 TIICSFRRVFLGLGM 659 (908)
40067 Q Consensus 645 ~~~C~~~~~~~~~gf 659 (908)
40068 ...|.+..++..+.+
40069 T Consensus 184 ~~~c~~~~~~~~~~~ 198 (436)
40070 T 5N2S_A 184 FHTCLMVACPVLILA 198 (436)
40071 T ss_dssp HHHHHHHHHHHHHHH
40072 T ss_pred hHHHHHhHHHHHHHH
40073 Confidence 446777666655433
40074
40075
40076 No 463
40077 >5LWE_A C-C chemokine receptor type 9; Membrane protein; HET: CLR, 79K, MLI, OLA; 2.8A {Homo sapiens}
40078 Probab=25.09 E-value=11 Score=35.31 Aligned_cols=20 Identities=10% Similarity=0.283 Sum_probs=11.5 Template_Neff=12.400
40079
40080 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSY 663 (908)
40081 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~ 663 (908)
40082 ....|....++..+++....
40083 T Consensus 93 ~~~~c~~~~~~~~~~~~~s~ 112 (331)
40084 T 5LWE_A 93 QTFMCKVVNSMYKMNFYSCV 112 (331)
40085 T ss_dssp -CHHHHHHHHHHHHHHHHHH
40086 T ss_pred chHHHHHHHHHHHHHHHHHH
40087 Confidence 46678877766555444333
40088
40089
40090 No 464
40091 >5ZTY_A G protein coupled receptor, T4; GPCR, cell signaling, ligand design; HET: OLC, SO4, PG4, OLA, 9JU, PEG, EPE; 2.8A {Homo sapiens}
40092 Probab=24.40 E-value=11 Score=38.32 Aligned_cols=20 Identities=15% Similarity=0.295 Sum_probs=9.0 Template_Neff=10.800
40093
40094 Q NP_000836.2 585 VVPVFVAILGIIATTFVIVT 604 (908)
40095 Q Consensus 585 ~~~~~~~~~~i~~~~~~~~~ 604 (908)
40096 ++..++.++|++.-+++++.
40097 T Consensus 37 ~~~~i~~~~gl~gN~lvl~~ 56 (500)
40098 T 5ZTY_A 37 VLCTLLGLLSALENVAVLYL 56 (500)
40099 T ss_pred HHHHHHHHHHHHHHHHHHHH
40100 Confidence 33444445555444444433
40101
40102
40103 No 465
40104 >2KSA_A Substance-P receptor, Substance P; Substance P, DMPC/CHAPS bicelle, Autodock; NMR {Homo sapiens}
40105 Probab=23.57 E-value=12 Score=35.48 Aligned_cols=16 Identities=19% Similarity=0.395 Sum_probs=9.5 Template_Neff=12.600
40106
40107 Q NP_000836.2 645 TIICSFRRVFLGLGMC 660 (908)
40108 Q Consensus 645 ~~~C~~~~~~~~~gf~ 660 (908)
40109 ...|.+..++...++.
40110 T Consensus 102 ~~~c~~~~~~~~~~~~ 117 (364)
40111 T 2KSA_A 102 LFYCKFHNFFPIAAVF 117 (364)
40112 T ss_dssp HHHHHHHHHHHHHHHH
40113 T ss_pred HHHHHHHHHHHHHHHH
40114 Confidence 5677776666554443
40115
40116
40117 No 466
40118 >5LWE_B C-C chemokine receptor type 9; Membrane protein; HET: 79K, OLA, MLI, CLR; 2.8A {Homo sapiens}
40119 Probab=23.45 E-value=12 Score=34.90 Aligned_cols=18 Identities=11% Similarity=0.333 Sum_probs=10.4 Template_Neff=12.400
40120
40121 Q NP_000836.2 644 DTIICSFRRVFLGLGMCF 661 (908)
40122 Q Consensus 644 ~~~~C~~~~~~~~~gf~l 661 (908)
40123 ....|.+..++..+++..
40124 T Consensus 93 ~~~~c~~~~~~~~~~~~~ 110 (331)
40125 T 5LWE_B 93 QTFMCKVVNSMYKMNFYS 110 (331)
40126 T ss_dssp -CTTHHHHHHHHHHHHHH
40127 T ss_pred chhHHHHHHHHHHHHHHH
40128 Confidence 456787776665544443
40129
40130
40131 No 467
40132 >5DHG_B Nociceptin receptor-Cytochrome b562 Chimera; Nociceptin/orphanin FQ peptide receptor, NOP; HET: DGV, OLA, OLC; 3.0A {Escherichia coli}
40133 Probab=23.42 E-value=12 Score=36.65 Aligned_cols=34 Identities=18% Similarity=0.097 Sum_probs=17.4 Template_Neff=12.100
40134
40135 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
40136 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
40137 ....|.+..++..+++...+-.++.- ..|...+.
40138 T Consensus 193 ~~~~c~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 227 (424)
40139 T 5DHG_B 193 GNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAIC 227 (424)
40140 T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
40141 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
40142 Confidence 35678877776655544433333332 33444443
40143
40144
40145 No 468
40146 >5DHH_B GPCR-BRIL Chimera; Nociceptin/orphanin FQ peptide receptor, NOP; HET: OLA, OLC, DGW; 3.004A {Homo sapiens}
40147 Probab=23.42 E-value=12 Score=36.65 Aligned_cols=34 Identities=18% Similarity=0.097 Sum_probs=17.4 Template_Neff=12.100
40148
40149 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTK-TNRIHRIF 677 (908)
40150 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K-~~ri~~if 677 (908)
40151 ....|.+..++..+++...+-.++.- ..|...+.
40152 T Consensus 193 ~~~~c~~~~~~~~~~~~~s~~~~~~iai~R~~~i~ 227 (424)
40153 T 5DHH_B 193 GNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAIC 227 (424)
40154 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
40155 T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
40156 Confidence 35678877776655544433333332 33444443
40157
40158
40159 No 469
40160 >4DKL_A Mu-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane; HET: SO4, CLR, MPG, BF0, 1PE; 2.8A {Mus musculus, Enterobacteria phage T4}
40161 Probab=20.35 E-value=15 Score=36.47 Aligned_cols=17 Identities=18% Similarity=0.227 Sum_probs=10.1 Template_Neff=11.900
40162
40163 Q NP_000836.2 644 DTIICSFRRVFLGLGMC 660 (908)
40164 Q Consensus 644 ~~~~C~~~~~~~~~gf~ 660 (908)
40165 ....|.+..++..+++.
40166 T Consensus 85 ~~~~C~~~~~~~~~~~~ 101 (464)
40167 T 4DKL_A 85 GNILCKIVISIDYYNMF 101 (464)
40168 T ss_dssp CSHHHHHHHHHHHHHHH
40169 T ss_pred cchHHHHHHHHHHHHHH
40170 Confidence 35678777766554433
40171
40172
40173 No 470
40174 >5NX2_A Glucagon-like peptide 1 receptor, truncated; 7TM, GPCR, signalling protein, membrane; HET: SOG, 9DQ, 9DZ, 9DT, 9DW, 9DK, NAG; 3.7A {Homo sapiens}
40175 Probab=20.13 E-value=16 Score=36.14 Aligned_cols=33 Identities=15% Similarity=0.316 Sum_probs=19.8 Template_Neff=10.600
40176
40177 Q NP_000836.2 645 TIICSFRRVFLGLGMCFSYAALLTKTNRIHRIF 677 (908)
40178 Q Consensus 645 ~~~C~~~~~~~~~gf~l~~~~l~~K~~ri~~if 677 (908)
40179 +..|.+..++........+.-+++-.+-+++..
40180 T Consensus 204 ~~~C~~~~~~~~~~~las~~w~~~~~~~~~~~i 236 (422)
40181 T 5NX2_A 204 SLSCRLVFLFMQYCVAANYYWLLVEGVYLYTLL 236 (422)
40182 T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
40183 T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
40184 Confidence 478888777766665555555555554444443
40185
40186
40187 No 471
40188 >6LN2_A Glucagon-like peptide 1 receptor,Rubredoxin,Glucagon-like peptide; Full length Human GLP1 receptor; HET: 97Y, NAG; 3.2A {Homo sapiens}
40189 Probab=20.07 E-value=16 Score=36.87 Aligned_cols=35 Identities=14% Similarity=0.264 Sum_probs=21.7 Template_Neff=8.200
40190
40191 Q NP_000836.2 644 DTIICSFRRVFLGLGMCFSYAALLTKTNRIHRIFE 678 (908)
40192 Q Consensus 644 ~~~~C~~~~~~~~~gf~l~~~~l~~K~~ri~~if~ 678 (908)
40193 ....|.+..++....+...+.-+++-.+-+++.+.
40194 T Consensus 199 ~~~~C~~~~~l~~y~~las~~W~~~~a~~l~~~i~ 233 (469)
40195 T 6LN2_A 199 DSLACRLVFLLCQYCVAANYYWLLVEGVYLYTLLA 233 (469)
40196 T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
40197 T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
40198 Confidence 35778888777766666666666555555444443
40199
40200