Mercurial > repos > guerler > ffindex_dbkit_extract
view macros.xml @ 2:953f0fd655c0 draft
"planemo upload commit 2a0fc8275bfbb76a828082424d346bbe0fd40914"
author | guerler |
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date | Thu, 01 Apr 2021 19:36:20 +0000 |
parents | 1d9fcf2157e0 |
children |
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<macros> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">ffindex-dbkit</requirement> <yield /> </requirements> </xml> <token name="@TOOL_VERSION@">0.2</token> <token name="@VERSION_SUFFIX@">0</token> <xml name="ffindex_single_inputs"> <param name="ffdata" type="data" format="ffdata" label="Database" help="Database Data file." /> <param name="ffindex" type="data" format="ffindex" label="Database Index" help="Database Index file." /> </xml> <xml name="citations"> <citations> <!--citation type="doi">10.1021/ci300579r</citation--> </citations> </xml> <xml name="logfile"> <param name="logfile" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Output log file" /> </xml> <xml name="db_source"> <conditional name="db_source"> <param name="db_source_selector" type="select" label="Custom or built-in ffindex" help="Built-ins have been indexed using ffindex"> <option value="indexed" selected="true">Use a built-in index</option> <option value="history">Use a ffindex from history</option> </param> <when value="indexed"> <param name="ffindex" type="select" label="Select ffindex" help=""> <options from_data_table="ffindex_indices"> <filter type="sort_by" column="0" /> <validator type="no_options" message="No indices are available" /> </options> </param> </when> <when value="history"> <expand macro="ffindex_single_inputs" /> </when> </conditional> </xml> <xml name="db_source2"> <conditional name="db_source2"> <param name="db_source_selector" type="select" label="Custom or built-in ffindex" help="Built-ins have been indexed using ffindex"> <option value="indexed" selected="true">Use a built-in index</option> <option value="history">Use a ffindex from history</option> </param> <when value="indexed"> <param name="ffindex" type="select" label="Select ffindex" help=""> <options from_data_table="ffindex_indices"> <filter type="sort_by" column="0" /> <validator type="no_options" message="No indices are available" /> </options> </param> </when> <when value="history"> <expand macro="ffindex_single_inputs" /> </when> </conditional> </xml> <token name="@db_source@"> #if $db_source.db_source_selector == 'indexed': -d '${db_source.ffindex.fields.path}.ffdata' -i '${db_source.ffindex.fields.path}.ffindex' #else -d '$db_source.ffdata' -i '$db_source.ffindex' #end if </token> <token name="@db_source2@"> #if $db_source.db_source_selector == 'indexed': -sd '${db_source2.ffindex.fields.path}.ffdata' -si '${db_source2.ffindex.fields.path}.ffindex' #else -sd '$db_source2.ffdata' -si '$db_source2.ffindex' #end if </token> </macros>