annotate planemo/lib/python3.7/site-packages/schema_salad/main.py @ 1:56ad4e20f292 draft

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author guerler
date Fri, 31 Jul 2020 00:32:28 -0400
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1
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1 """Command line interface to schema-salad."""
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2 from __future__ import absolute_import, print_function
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3
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4 import argparse
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5 import logging
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6 import os
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7 import sys
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8 from typing import Any, Dict, List, Mapping, MutableSequence, Optional, Union, cast
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9
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10 import pkg_resources # part of setuptools
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11 import six
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12 from rdflib.parser import Parser
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13 from rdflib.plugin import register
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14 from six.moves import urllib
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15 from typing_extensions import Text # pylint: disable=unused-import
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16
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17 from ruamel.yaml.comments import CommentedSeq
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18
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19 from . import codegen, jsonld_context, schema
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20 from .avro.schema import SchemaParseException
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21 from .exceptions import ValidationException, to_one_line_messages
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22 from .makedoc import makedoc
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23 from .ref_resolver import Loader, file_uri
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24 from .utils import json_dumps
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25
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26 # move to a regular typing import when Python 3.3-3.6 is no longer supported
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27
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28
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29 register("json-ld", Parser, "rdflib_jsonld.parser", "JsonLDParser")
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30 _logger = logging.getLogger("salad")
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31
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32
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33 def printrdf(
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34 workflow, # type: str
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35 wf, # type: Union[List[Dict[Text, Any]], Dict[Text, Any]]
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36 ctx, # type: Dict[Text, Any]
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37 sr, # type: str
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38 ):
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39 # type: (...) -> None
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40 g = jsonld_context.makerdf(workflow, wf, ctx)
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41 print(g.serialize(format=sr, encoding="utf-8").decode("utf-8"))
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42
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43
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44 def main(argsl=None): # type: (Optional[List[str]]) -> int
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45 if argsl is None:
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46 argsl = sys.argv[1:]
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47
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48 parser = argparse.ArgumentParser()
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49 parser.add_argument(
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50 "--rdf-serializer",
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51 help="Output RDF serialization format used by --print-rdf"
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52 "(one of turtle (default), n3, nt, xml)",
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53 default="turtle",
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54 )
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55
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56 parser.add_argument(
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57 "--skip-schemas",
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58 action="store_true",
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59 default=False,
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60 help="If specified, ignore $schemas sections.",
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61 )
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62 parser.add_argument(
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63 "--strict-foreign-properties",
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64 action="store_true",
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65 help="Strict checking of foreign properties",
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66 default=False,
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67 )
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68
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69 exgroup = parser.add_mutually_exclusive_group()
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70 exgroup.add_argument(
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71 "--print-jsonld-context",
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72 action="store_true",
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73 help="Print JSON-LD context for schema",
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74 )
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75 exgroup.add_argument("--print-rdfs", action="store_true", help="Print RDF schema")
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76 exgroup.add_argument("--print-avro", action="store_true", help="Print Avro schema")
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77
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78 exgroup.add_argument(
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79 "--print-rdf",
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80 action="store_true",
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81 help="Print corresponding RDF graph for document",
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82 )
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83 exgroup.add_argument(
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84 "--print-pre", action="store_true", help="Print document after preprocessing"
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85 )
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86 exgroup.add_argument("--print-index", action="store_true", help="Print node index")
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87 exgroup.add_argument(
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88 "--print-metadata", action="store_true", help="Print document metadata"
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89 )
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90 exgroup.add_argument(
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91 "--print-inheritance-dot",
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92 action="store_true",
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93 help="Print graphviz file of inheritance",
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94 )
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95 exgroup.add_argument(
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96 "--print-fieldrefs-dot",
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97 action="store_true",
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98 help="Print graphviz file of field refs",
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99 )
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100
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101 exgroup.add_argument(
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102 "--codegen",
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103 type=str,
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104 metavar="language",
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105 help="Generate classes in target language, currently supported: python, java",
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106 )
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107
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108 parser.add_argument(
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109 "--codegen-target",
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110 type=str,
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111 default=None,
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112 help="Defaults to sys.stdout for python and ./ for Java",
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113 )
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114
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115 parser.add_argument(
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116 "--codegen-examples",
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117 type=str,
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118 metavar="directory",
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119 default=None,
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120 help="Directory of example documents for test case generation (Java only).",
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121 )
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122
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123 exgroup.add_argument(
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124 "--print-oneline",
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125 action="store_true",
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126 help="Print each error message in oneline",
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127 )
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128
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129 exgroup.add_argument(
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130 "--print-doc", action="store_true", help="Print HTML schema documentation page"
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131 )
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132
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133 exgroup = parser.add_mutually_exclusive_group()
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134 exgroup.add_argument(
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135 "--strict",
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136 action="store_true",
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137 help="Strict validation (unrecognized or out of place fields are error)",
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138 default=True,
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139 dest="strict",
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140 )
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141 exgroup.add_argument(
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142 "--non-strict",
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143 action="store_false",
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144 help="Lenient validation (ignore unrecognized fields)",
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145 default=True,
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146 dest="strict",
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147 )
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148
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149 exgroup = parser.add_mutually_exclusive_group()
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150 exgroup.add_argument("--verbose", action="store_true", help="Default logging")
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151 exgroup.add_argument(
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152 "--quiet", action="store_true", help="Only print warnings and errors."
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153 )
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154 exgroup.add_argument("--debug", action="store_true", help="Print even more logging")
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155
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156 parser.add_argument(
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157 "--only",
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158 action="append",
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159 help="Use with --print-doc, document only listed types",
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160 )
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161 parser.add_argument(
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162 "--redirect",
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163 action="append",
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164 help="Use with --print-doc, override default link for type",
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165 )
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166 parser.add_argument(
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167 "--brand", help="Use with --print-doc, set the 'brand' text in nav bar"
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168 )
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169 parser.add_argument(
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170 "--brandlink", help="Use with --print-doc, set the link for 'brand' in nav bar"
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171 )
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172 parser.add_argument(
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173 "--primtype",
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174 default="#PrimitiveType",
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175 help="Use with --print-doc, link to use for primitive types (string, int etc)",
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176 )
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177
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178 parser.add_argument("schema", type=str, nargs="?", default=None)
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179 parser.add_argument("document", type=str, nargs="?", default=None)
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180 parser.add_argument(
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181 "--version", "-v", action="store_true", help="Print version", default=None
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182 )
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183
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184 args = parser.parse_args(argsl)
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185
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186 if args.version is None and args.schema is None:
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187 print("{}: error: too few arguments".format(sys.argv[0]))
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188 return 1
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189
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190 if args.quiet:
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191 _logger.setLevel(logging.WARN)
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192 if args.debug:
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193 _logger.setLevel(logging.DEBUG)
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194
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195 pkg = pkg_resources.require("schema_salad")
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196 if pkg:
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197 if args.version:
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198 print("{} Current version: {}".format(sys.argv[0], pkg[0].version))
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199 return 0
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200 else:
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201 _logger.info("%s Current version: %s", sys.argv[0], pkg[0].version)
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202
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203 # Get the metaschema to validate the schema
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204 metaschema_names, metaschema_doc, metaschema_loader = schema.get_metaschema()
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205
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206 # Load schema document and resolve refs
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207
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208 schema_uri = args.schema
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209 if not (
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210 urllib.parse.urlparse(schema_uri)[0]
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211 and urllib.parse.urlparse(schema_uri)[0] in [u"http", u"https", u"file"]
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212 ):
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213 schema_uri = file_uri(os.path.abspath(schema_uri))
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214 schema_raw_doc = metaschema_loader.fetch(schema_uri)
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215
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216 try:
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217 schema_doc, schema_metadata = metaschema_loader.resolve_all(
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218 schema_raw_doc, schema_uri
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219 )
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220 except ValidationException as e:
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221 _logger.error(
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222 "Schema `%s` failed link checking:\n%s",
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223 args.schema,
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224 Text(e),
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225 exc_info=(True if args.debug else False),
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226 )
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227 _logger.debug("Index is %s", list(metaschema_loader.idx.keys()))
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228 _logger.debug("Vocabulary is %s", list(metaschema_loader.vocab.keys()))
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229 return 1
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230 except (RuntimeError) as e:
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231 _logger.error(
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232 "Schema `%s` read error:\n%s",
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233 args.schema,
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234 Text(e),
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235 exc_info=(True if args.debug else False),
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236 )
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237 return 1
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238
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239 if args.print_doc:
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240 makedoc(args)
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241 return 0
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242
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243 # Optionally print the schema after ref resolution
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244 if not args.document and args.print_pre:
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245 print(json_dumps(schema_doc, indent=4))
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246 return 0
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247
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248 if not args.document and args.print_index:
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249 print(json_dumps(list(metaschema_loader.idx.keys()), indent=4))
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250 return 0
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251
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252 # Validate the schema document against the metaschema
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253 try:
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254 schema.validate_doc(
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255 metaschema_names, schema_doc, metaschema_loader, args.strict
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256 )
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257 except ValidationException as e:
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258 _logger.error("While validating schema `%s`:\n%s", args.schema, Text(e))
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diff changeset
259 return 1
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guerler
parents:
diff changeset
260
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guerler
parents:
diff changeset
261 # Get the json-ld context and RDFS representation from the schema
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guerler
parents:
diff changeset
262 metactx = schema.collect_namespaces(schema_metadata)
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guerler
parents:
diff changeset
263 if "$base" in schema_metadata:
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guerler
parents:
diff changeset
264 metactx["@base"] = schema_metadata["$base"]
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guerler
parents:
diff changeset
265 if isinstance(schema_doc, CommentedSeq):
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guerler
parents:
diff changeset
266 (schema_ctx, rdfs) = jsonld_context.salad_to_jsonld_context(schema_doc, metactx)
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
267 else:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
268 raise ValidationException(
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
269 "Expected a CommentedSeq, got {}: {}.".format(type(schema_doc), schema_doc)
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
270 )
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guerler
parents:
diff changeset
271
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guerler
parents:
diff changeset
272 # Create the loader that will be used to load the target document.
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guerler
parents:
diff changeset
273 document_loader = Loader(schema_ctx, skip_schemas=args.skip_schemas)
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guerler
parents:
diff changeset
274
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guerler
parents:
diff changeset
275 if args.codegen:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
276 codegen.codegen(
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
277 args.codegen,
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
278 cast(List[Dict[Text, Any]], schema_doc),
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
279 schema_metadata,
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guerler
parents:
diff changeset
280 document_loader,
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
281 target=args.codegen_target,
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guerler
parents:
diff changeset
282 examples=args.codegen_examples,
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guerler
parents:
diff changeset
283 )
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guerler
parents:
diff changeset
284 return 0
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guerler
parents:
diff changeset
285
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guerler
parents:
diff changeset
286 # Make the Avro validation that will be used to validate the target
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guerler
parents:
diff changeset
287 # document
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parents:
diff changeset
288 if isinstance(schema_doc, MutableSequence):
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diff changeset
289 avsc_obj = schema.make_avro(schema_doc, document_loader)
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guerler
parents:
diff changeset
290 try:
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parents:
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291 avsc_names = schema.make_avro_schema_from_avro(avsc_obj)
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
292 except SchemaParseException as err:
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guerler
parents:
diff changeset
293 _logger.error(
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
294 "Schema `%s` error:\n%s",
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guerler
parents:
diff changeset
295 args.schema,
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guerler
parents:
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296 Text(err),
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
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parents:
diff changeset
297 exc_info=((type(err), err, None) if args.debug else None),
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
298 )
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guerler
parents:
diff changeset
299 if args.print_avro:
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guerler
parents:
diff changeset
300 print(json_dumps(avsc_obj, indent=4))
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guerler
parents:
diff changeset
301 return 1
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
302 else:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
303 _logger.error("Schema `%s` must be a list.", args.schema)
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
304 return 1
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
305
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guerler
parents:
diff changeset
306 # Optionally print Avro-compatible schema from schema
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guerler
parents:
diff changeset
307 if args.print_avro:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
308 print(json_dumps(avsc_obj, indent=4))
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
309 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
310
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guerler
parents:
diff changeset
311 # Optionally print the json-ld context from the schema
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
312 if args.print_jsonld_context:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
313 j = {"@context": schema_ctx}
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
314 print(json_dumps(j, indent=4, sort_keys=True))
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
315 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
316
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
317 # Optionally print the RDFS graph from the schema
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guerler
parents:
diff changeset
318 if args.print_rdfs:
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parents:
diff changeset
319 print(rdfs.serialize(format=args.rdf_serializer).decode("utf-8"))
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guerler
parents:
diff changeset
320 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
321
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
322 if args.print_metadata and not args.document:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
323 print(json_dumps(schema_metadata, indent=4))
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guerler
parents:
diff changeset
324 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
325
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
326 if args.print_inheritance_dot:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
327 schema.print_inheritance(schema_doc, sys.stdout)
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guerler
parents:
diff changeset
328 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
329
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
330 if args.print_fieldrefs_dot:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
331 schema.print_fieldrefs(schema_doc, document_loader, sys.stdout)
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
332 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
333
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
334 # If no document specified, all done.
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
335 if not args.document:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
336 print("Schema `{}` is valid".format(args.schema))
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
337 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
338
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
339 # Load target document and resolve refs
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
340 try:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
341 uri = args.document
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
342 document, doc_metadata = document_loader.resolve_ref(
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
343 uri, strict_foreign_properties=args.strict_foreign_properties
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
344 )
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
345 except ValidationException as e:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
346 msg = to_one_line_messages(e) if args.print_oneline else six.text_type(e)
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
347 _logger.error(
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
348 "Document `%s` failed validation:\n%s",
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
349 args.document,
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
350 msg,
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
351 exc_info=args.debug,
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
352 )
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
353 return 1
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
354
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
355 # Optionally print the document after ref resolution
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
356 if args.print_pre:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
357 print(json_dumps(document, indent=4))
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
358 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
359
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
360 if args.print_index:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
361 print(json_dumps(list(document_loader.idx.keys()), indent=4))
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
362 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
363
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
364 # Validate the user document against the schema
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
365 try:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
366 schema.validate_doc(
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
367 avsc_names,
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
368 document,
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
369 document_loader,
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
370 args.strict,
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
371 strict_foreign_properties=args.strict_foreign_properties,
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
372 )
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
373 except ValidationException as e:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
374 msg = to_one_line_messages(e) if args.print_oneline else six.text_type(e)
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
375 _logger.error("While validating document `%s`:\n%s" % (args.document, msg))
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
376 return 1
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
377
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
378 # Optionally convert the document to RDF
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
379 if args.print_rdf:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
380 if isinstance(document, (Mapping, MutableSequence)):
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
381 printrdf(args.document, document, schema_ctx, args.rdf_serializer)
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
382 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
383 else:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
384 print("Document must be a dictionary or list.")
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
385 return 1
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
386
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
387 if args.print_metadata:
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
388 print(json_dumps(doc_metadata, indent=4))
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
389 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
390
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
391 print("Document `{}` is valid".format(args.document))
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
392
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
393 return 0
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
394
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
395
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
396 if __name__ == "__main__":
56ad4e20f292 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff changeset
397 sys.exit(main(sys.argv[1:]))