Mercurial > repos > guerler > springsuite
comparison planemo/lib/python3.7/site-packages/galaxy/tool_util/fetcher.py @ 1:56ad4e20f292 draft
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
| author | guerler |
|---|---|
| date | Fri, 31 Jul 2020 00:32:28 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| 0:d30785e31577 | 1:56ad4e20f292 |
|---|---|
| 1 from galaxy.util import plugin_config | |
| 2 | |
| 3 | |
| 4 class ToolLocationFetcher(object): | |
| 5 | |
| 6 def __init__(self): | |
| 7 self.resolver_classes = self.__resolvers_dict() | |
| 8 | |
| 9 def __resolvers_dict(self): | |
| 10 import galaxy.tool_util.locations | |
| 11 return plugin_config.plugins_dict(galaxy.tool_util.locations, 'scheme') | |
| 12 | |
| 13 def to_tool_path(self, path_or_uri_like, **kwds): | |
| 14 if "://" not in path_or_uri_like: | |
| 15 path = path_or_uri_like | |
| 16 else: | |
| 17 uri_like = path_or_uri_like | |
| 18 if ":" not in path_or_uri_like: | |
| 19 raise Exception("Invalid URI passed to get_tool_source") | |
| 20 scheme, rest = uri_like.split(":", 2) | |
| 21 if scheme not in self.resolver_classes: | |
| 22 raise Exception("Unknown tool scheme [%s] for URI [%s]" % (scheme, uri_like)) | |
| 23 path = self.resolver_classes[scheme]().get_tool_source_path(uri_like) | |
| 24 | |
| 25 return path |