Mercurial > repos > idot > fastx_toolkit2
view fastx_nucleotides_distribution_line.xml @ 0:78a7d28f2a15 draft
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author | idot |
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date | Wed, 10 Jul 2013 06:13:48 -0400 |
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<tool id="cshl_fastx_nucleotides_distribution_line_plot" name="Draw nucleotides distribution line chart"> <command> fastx_nucleotide_distribution_line_graph.sh -i '$input' -o '$output' </command> <inputs> <param format="txt" name="input" type="data" label="Statistics Text File (output of 'FASTX Statistics' tool)" /> </inputs> <outputs> <data format="png" name="output" metadata_source="input" /> </outputs> <help> **What it does** Creates a line and points graph for the nucleotide distribution in the Solexa library. .. class:: infomark **TIP:** Use the **FASTQ Statistics** tool to generate the report file needed for this tool. ----- **Output Examples** .. image:: ../static/fastx_icons/fastq_nucleotides_distribution_line_graph.png ------ This tool was created by Oliver Tam, based on `FASTX-toolkit`__ by Assaf Gordon. .. __: http://hannonlab.cshl.edu/fastx_toolkit/ </help> </tool> <!-- FASTQ-Nucleotides-Distribution-Line is part of the FASTX-toolkit, by A.Gordon (gordon@cshl.edu) -->