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1 <data_manager tool_file="data_manager/data_manager_fetch_gff.xml" id="data_manager_fetch_gff">
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2 <data_table name="all_gff">
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3 <output>
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4 <column name="value" />
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5 <column name="dbkey" />
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6 <column name="name" />
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7 <column name="path" output_ref="out_file">
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8 <move type="file">
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9 <source>${path}</source>
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10 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/gff/${path}</target>
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11 </move>
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12 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/gff/${path}</value_translation>
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13 <value_translation type="function">abspath</value_translation>
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14 </column>
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15 </output>
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16 </data_table>
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17 <data_table name="representative_gff">
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18 <output>
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19 <column name="value" />
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20 <column name="dbkey" />
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21 <column name="name" />
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22 <column name="path" output_ref="out_file">
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23 <move type="file">
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24 <source>${path}</source>
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25 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/representative_gff/${path}</target>
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26 </move>
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27 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/representative_gff/${path}</value_translation>
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28 <value_translation type="function">abspath</value_translation>
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29 </column>
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30 </output>
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31 </data_table>
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32
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33 <data_table name="__dbkeys__">
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34 <output>
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35 <column name="value" />
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36 <column name="name" />
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37 <column name="len_path" output_ref="out_file">
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38 <move type="file">
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39 <source>${len_path}</source>
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40 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/len/${len_path}</target>
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41 </move>
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42 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/len/${len_path}</value_translation>
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43 <value_translation type="function">abspath</value_translation>
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44 </column>
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45 </output>
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46 </data_table>
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47 </data_manager>
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