diff data_manager/salmon_index_builder.py @ 8:cbe62bd6e149 draft

Uploaded
author ieguinoa
date Tue, 23 Jul 2019 11:12:15 -0400
parents d22f69a2e80e
children
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--- a/data_manager/salmon_index_builder.py	Tue Jul 23 10:50:43 2019 -0400
+++ b/data_manager/salmon_index_builder.py	Tue Jul 23 11:12:15 2019 -0400
@@ -59,6 +59,7 @@
     parser.add_argument( '--fasta_dbkey', dest='fasta_dbkey', action='store', type=str, default=None )
     parser.add_argument( '--fasta_description', dest='fasta_description', action='store', type=str, default=None )
     parser.add_argument( '--data_table_name', dest='data_table_name', action='store', type=str, default='salmon_indexes' )
+    parser.add_argument( '-v','--index_version', dest='index_version', action='store', type=str, help='Use IndexVersion attribute from header.json' )
     parser.add_argument( '-k', '--kmer_size', dest='kmer_size', action='store', type=str, help='kmer_size' )
     options = parser.parse_args()