Mercurial > repos > ieguinoa > data_manager_salmon_index_builder
view data_manager_conf.xml @ 0:6cd60ba8a842 draft
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author | ieguinoa |
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date | Tue, 14 Aug 2018 11:14:52 -0400 |
parents | |
children | c5dea2080109 |
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<?xml version="1.0"?> <data_managers> <data_manager tool_file="data_manager/data_manager_fetch_gff.xml" id="data_manager_fetch_gff"> <data_table name="all_gff"> <output> <column name="value" /> <column name="dbkey" /> <column name="name" /> <column name="path" output_ref="out_file"> <move type="file"> <source>${path}</source> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/gff/${path}</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/gff/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> <data_table name="representative_gff"> <output> <column name="value" /> <column name="dbkey" /> <column name="name" /> <column name="path" output_ref="out_file"> <move type="file"> <source>${path}</source> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/representative_gff/${path}</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/representative_gff/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> </data_manager> </data_managers>