Mercurial > repos > ieguinoa > ena_upload
comparison README.md @ 0:5d59238cd3f4 draft
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| author | ieguinoa |
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| date | Wed, 02 Feb 2022 17:16:15 +0000 |
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| -1:000000000000 | 0:5d59238cd3f4 |
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| 1 # ena-upload-wrapper | |
| 2 Galaxy wrapper for ena-cli-upload | |
| 3 | |
| 4 This tool is shipped in a ready to use Galaxy container found [here](https://github.com/ELIXIR-Belgium/ena-upload-container). | |
| 5 | |
| 6 ## Setting up credentials on Galaxy | |
| 7 | |
| 8 The admin of the server can set up global credentials through a file with the format: | |
| 9 ``` | |
| 10 username: webin_id | |
| 11 password: webin_password | |
| 12 ``` | |
| 13 | |
| 14 The path to this file must be exported as an environment variable called $GALAXY_ENA_SECRETS | |
| 15 | |
| 16 Alternatively, the admin can enable users to set their own credentials for this tool. | |
| 17 To enable it, make sure the file `config/user_preferences_extra_conf.yml` has the following section: | |
| 18 | |
| 19 ``` | |
| 20 ena_webin_account: | |
| 21 description: Your ENA Webin account details | |
| 22 inputs: | |
| 23 - name: webin_id | |
| 24 label: ENA Webin ID | |
| 25 type: text | |
| 26 required: False | |
| 27 - name: password | |
| 28 label: Password | |
| 29 type: password | |
| 30 required: False | |
| 31 ``` |