Mercurial > repos > imgteam > binaryimage2points
diff binaryimage2points.xml @ 0:cb1eaebdb4c4 draft
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/binaryimage2points/ commit c3f4b766f03770f094fda6bda0a5882c0ebd4581
author | imgteam |
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date | Sat, 09 Feb 2019 14:31:13 -0500 |
parents | |
children | f38f42d55813 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/binaryimage2points.xml Sat Feb 09 14:31:13 2019 -0500 @@ -0,0 +1,32 @@ +<tool id="ip_binaryimage_to_points" name="Binary To Points" version="0.1"> + <description>Converts Binary Image to Points</description> + <requirements> + <requirement type="package" version="1.15.4">numpy</requirement><!--https://github.com/numpy/numpy/pull/432 --> + <requirement type="package" version="0.14.2">scikit-image</requirement> + <requirement type="package" version="0.23.4">pandas</requirement> + </requirements> + <command> + <![CDATA[ + python '$__tool_directory__/binaryimage2points.py' '$input' '$output' + ]]> + </command> + <inputs> + <param name="input" type="data" format="tiff" label="Binary Image File"/> + </inputs> + <outputs> + <data format="tabular" name="output"/> + </outputs> + <tests> + <test> + <param name="input" value="galaxyIcon_noText.tif" /> + <output name="output" value="points.tsv" ftype="tabular" /> + </test> + </tests> + <help> + **What it does** + + This tool converts an image to points.</help> + <citations> + <citation type="doi">10.7717/peerj.453</citation> + </citations> +</tool>