Mercurial > repos > imgteam > colorize_labels
diff colorize_labels.py @ 3:2d1de6e7b113 draft default tip
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/colorize_labels commit c86a1b93cb7732f7331a981d13465653cc1a2790
author | imgteam |
---|---|
date | Wed, 24 Apr 2024 08:12:15 +0000 |
parents | 43c80f3c3b60 |
children |
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--- a/colorize_labels.py Thu Apr 04 15:25:22 2024 +0000 +++ b/colorize_labels.py Wed Apr 24 08:12:15 2024 +0000 @@ -1,5 +1,6 @@ import argparse +import giatools.io import matplotlib.colors as mpl import networkx as nx import numpy as np @@ -55,7 +56,7 @@ args = parser.parse_args() # Load image and normalize - im = skimage.io.imread(args.input) + im = giatools.io.imread(args.input) im = np.squeeze(im) assert im.ndim == 2