Mercurial > repos > imgteam > image_info

annotate image_info.xml @ 0:8c25d4ff0b51 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
author imgteam
date Fri, 19 Jul 2019 07:29:08 -0400
parents
children 7b6d9412c7f8
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
1 <tool id="ip_imageinfo" name="Image Info" version="0.1">
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
2 <description>Show Image Info</description>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
3 <requirements>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
4 <requirement type="package" version="5.7.1">bftools</requirement>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
5 </requirements>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
6 <command>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
7 <![CDATA[
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
8 showinf '$input_file' -no-upgrade -minmax -nopix > '$output'
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
9 ]]>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
10 </command>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
11 <inputs>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
12 <param label="Input Image" name="input_file" type="data" format="tiff,tif,png,jpeg,bmp"/>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
13 </inputs>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
14 <outputs>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
15 <data format="txt" name="output"/>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
16 </outputs>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
17 <tests>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
18 <test>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
19 <param name="input_file" value="input.tiff" />
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
20 <output name="output" value="res.txt" ftype="txt" compare="diff" lines_diff="6"/>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
21 </test>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
22 </tests>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
23 <help>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
24 **What it does**
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
25
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
26 Extracts metadata from an image.
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
27 </help>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
28 <citations>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
29 <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
30 </citations>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
parents:
diff changeset
31 </tool>