Mercurial > repos > imgteam > visceral_evaluatesegmentation

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/visceral-evaluatesegmentation commit 6b687746bdb3d5d1fb11ecffd6dd1bf42dc2c38d
author imgteam
date Fri, 10 Nov 2023 14:23:38 +0000
parents 8c1a805c2fc5
children
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<measurement>
  <fixed-image filename="/tmp/tmpjybJID/files/000/dataset_1.dat" nonzeropoints="0" intersection="50477"/>
  <moving-image filename="/tmp/tmpjybJID/files/000/dataset_1.dat" nonzeropoints="0" intersection="50477"/>
  <metrics>
    <DICE name="Dice Coefficient (F1-Measure)" symbol="DICE" type="similarity" value="1.000000"/>
    <JACRD name="Jaccard Coefficient" symbol="JACRD" type="similarity" value="1.000000"/>
    <AUC name="Area under ROC Curve" symbol="AUC" type="similarity" value="1.000000"/>
    <KAPPA name="Cohen Kappa" symbol="KAPPA" type="similarity" value="1.000000"/>
    <RNDIND name="Rand Index" symbol="RNDIND" type="similarity" value="1.000000"/>
    <ADJRIND name="Adjusted Rand Index" symbol="ADJRIND" type="similarity" value="1.000000"/>
    <ICCORR name="Interclass Correlation" symbol="ICCORR" type="similarity" value="1.000000"/>
    <VOLSMTY name="Volumetric Similarity Coefficient" symbol="VOLSMTY" type="similarity" value="1.000000"/>
    <MUTINF name="Mutual Information" symbol="MUTINF" type="similarity" value="0.984545"/>
    <HDRFDST name="Hausdorff Distance" symbol="HDRFDST" type="distance" value="0.000000" executiontime="16" unit="voxel"/>
    <AVGDIST name="Average Hausdorff Distance" symbol="AVGDIST" type="distance" value="0.000000" executiontime="5" unit="voxel"/>
    <MAHLNBS name="Mahanabolis Distance" symbol="MAHLNBS" type="distance" value="0.000000"/>
    <VARINFO name="Variation of Information" symbol="VARINFO" type="distance" value="-0.000000"/>
    <GCOERR name="Global Consistency Error" symbol="GCOERR" type="distance" value="0.000000"/>
    <PROBDST name="Probabilistic Distance" symbol="PROBDST" type="distance" value="0.000000"/>
    <SNSVTY name="Sensitivity (Recall, true positive rate)" symbol="SNSVTY" type="similarity" value="1.000000"/>
    <SPCFTY name="Specificity (true negative rate)" symbol="SPCFTY" type="similarity" value="1.000000"/>
    <PRCISON name="Precision (Confidence)" symbol="PRCISON" type="similarity" value="1.000000"/>
    <FMEASR name="F-Measure" symbol="FMEASR" type="similarity" value="1.000000"/>
    <ACURCY name="Accuracy" symbol="ACURCY" type="similarity" value="1.000000"/>
    <FALLOUT name="Fallout (false positive rate)" symbol="FALLOUT" type="distance" value="0.000000"/>
    <TP name="true positive" symbol="TP" type="similarity" value="49962" unit="voxel"/>
    <FP name="false positive" symbol="FP" type="similarity" value="0" unit="voxel"/>
    <TN name="true negative" symbol="TN" type="similarity" value="37223" unit="voxel"/>
    <FN name="false negative" symbol="FN" type="similarity" value="0" unit="voxel"/>
    <REFVOL name="reference volume" symbol="REFVOL" type="similarity" value="49962" unit="voxel"/>
    <SEGVOL name="segmented volume" symbol="SEGVOL" type="similarity" value="49962" unit="voxel"/>
  </metrics>
  <time total-executiontime="51"/>
  <dimention max_x="328" max_y="264" max_z="0" voxelspacing_x="1.000000" voxelspacing_y="1.000000" voxelspacing_z="1.000000"/>
</measurement>