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comparison abricate_list.xml @ 3:6e9aea89e388 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/abricate/ commit 962161e1dde26559d0bc1ce5d7b75d2f354606c5
author iuc
date Mon, 04 Sep 2017 02:47:12 -0400
parents 2aa02d2a6af3
children 78c75f134c16
comparison
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2:2aa02d2a6af3 3:6e9aea89e388
1 <tool id="abricate_list" name="ABRicate List" version="0.5"> 1 <tool id="abricate_list" name="ABRicate List" version="0.7">
2 <requirements> 2 <requirements>
3 <requirement type="package" version="0.5">abricate</requirement> 3 <requirement type="package" version="0.7">abricate</requirement>
4 </requirements> 4 </requirements>
5 5
6 <version_command>abricate --version</version_command> 6 <version_command>abricate --version</version_command>
7 7
8 <command detect_errors="exit_code"><![CDATA[ 8 <command detect_errors="exit_code"><![CDATA[
9 abricate --list 2> '$report' 9 abricate --list > '$report'
10 ]]></command> 10 ]]></command>
11 11
12 <inputs> 12 <inputs>
13 </inputs> 13 </inputs>
14 14
16 <data name="report" format="txt" label="${tool.name} - list of databases"/> 16 <data name="report" format="txt" label="${tool.name} - list of databases"/>
17 </outputs> 17 </outputs>
18 18
19 <tests> 19 <tests>
20 <test> 20 <test>
21 <output name="report" ftype="txt" file="output_list.txt" compare="contains"/> 21 <output name="report" ftype="txt" file="output_list.txt" compare="contains" />
22 </test> 22 </test>
23 </tests> 23 </tests>
24 24
25 <help><![CDATA[ 25 <help><![CDATA[
26 **What it does** 26 **What it does**