view test-data/output_mincov100.txt @ 10:c2ef298da409 draft default tip

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/abricate/ commit 6285862fce2b3e298ef0333489392335091b5b0d"
author iuc
date Thu, 15 Apr 2021 18:21:41 +0000
parents b734db305578
children
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#FILE	SEQUENCE	START	END	STRAND	GENE	COVERAGE	COVERAGE_MAP	GAPS	%COVERAGE	%IDENTITY	DATABASE	ACCESSION	PRODUCT	RESISTANCE
MRSA0252.fna	gi|49482253|ref|NC_002952.2|	40786	41556	-	aadD_1	1-771/771	===============	0/0	100.00	99.74	resfinder	AF181950	aadD	Amikacin;Tobramycin
MRSA0252.fna	gi|49482253|ref|NC_002952.2|	44919	46925	-	mecA_6	1-2007/2007	===============	0/0	100.00	100.00	resfinder	BX571856	mecA	Amoxicillin;Amoxicillin+Clavulanic_acid;Ampicillin;Ampicillin+Clavulanic_acid;Cefepime;Cefixime;Cefotaxime;Cefoxitin;Ceftazidime;Ertapenem;Imipenem;Meropenem;Piperacillin;Piperacillin+Tazobactam
MRSA0252.fna	gi|49482253|ref|NC_002952.2|	55890	56621	+	erm(A)_1	1-732/732	===============	0/0	100.00	100.00	resfinder	X03216	erm(A)	Erythromycin;Lincomycin;Clindamycin;Quinupristin;Pristinamycin_IA;Virginiamycin_S
MRSA0252.fna	gi|49482253|ref|NC_002952.2|	56747	57529	-	ant(9)-Ia_1	1-783/783	===============	0/0	100.00	100.00	resfinder	X02588	ant(9)-Ia	
MRSA0252.fna	gi|49482253|ref|NC_002952.2|	1796513	1797244	+	erm(A)_1	1-732/732	===============	0/0	100.00	100.00	resfinder	X03216	erm(A)	Erythromycin;Lincomycin;Clindamycin;Quinupristin;Pristinamycin_IA;Virginiamycin_S
MRSA0252.fna	gi|49482253|ref|NC_002952.2|	1797370	1798152	-	ant(9)-Ia_1	1-783/783	===============	0/0	100.00	100.00	resfinder	X02588	ant(9)-Ia	
MRSA0252.fna	gi|49482253|ref|NC_002952.2|	1913785	1914672	+	blaZ_78	1-888/888	===============	0/0	100.00	99.66	resfinder	KU607301	blaZ	Amoxicillin;Ampicillin;Penicillin;Piperacillin