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comparison test-data/TEST_6/TEST_6.embl @ 4:3f0aa1b3e816 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit e2c4ab5546b135ff903545073c3223aab166d8f5
author iuc
date Mon, 24 Jul 2023 11:22:16 +0000
parents
children 92eee5f31117
comparison
equal deleted inserted replaced
3:865ece5ca178 4:3f0aa1b3e816
1 ID contig_1; ; circular; DNA; ; PRO; 1330 BP.
2 XX
3 AC contig_1;
4 XX
5 DE plasmid unnamed1, complete sequence
6 XX
7 OS .
8 OC .
9 XX
10 CC Annotated with Bakta
11 CC Software: v1.8.1
12 CC Database: v5.0, full
13 CC DOI: 10.1099/mgen.0.000685
14 CC URL: github.com/oschwengers/bakta
15 CC
16 CC ##Genome Annotation Summary:##
17 CC Annotation Date :: 06/19/2023, 09:31:33
18 CC CDSs :: 2
19 CC tRNAs :: 0
20 CC tmRNAs :: 0
21 CC rRNAs :: 0
22 CC ncRNAs :: 0
23 CC regulatory ncRNAs :: 0
24 CC CRISPR Arrays :: 0
25 CC oriCs/oriVs :: 0
26 CC oriTs :: 0
27 CC gaps :: 0
28 CC pseudogenes :: 0
29 XX
30 FH Key Location/Qualifiers
31 FH
32 FT source 1..1330
33 FT /mol_type="genomic DNA"
34 FT /plasmid="unnamed1"
35 FT gene 413..736
36 FT /locus_tag="IHHALP_00005"
37 FT CDS 413..736
38 FT /product="hypothetical protein"
39 FT /locus_tag="IHHALP_00005"
40 FT /protein_id="gnl|Bakta|IHHALP_00005"
41 FT /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
42 FT AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
43 FT MAD"
44 FT /codon_start=1
45 FT /transl_table=11
46 FT /inference="ab initio prediction:Prodigal:2.6"
47 FT gene complement(join(971..1330,1..141))
48 FT /locus_tag="IHHALP_00010"
49 FT CDS complement(join(971..1330,1..141))
50 FT /product="hypothetical protein"
51 FT /locus_tag="IHHALP_00010"
52 FT /protein_id="gnl|Bakta|IHHALP_00010"
53 FT /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
54 FT EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
55 FT YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
56 FT IPI"
57 FT /codon_start=1
58 FT /transl_table=11
59 FT /inference="ab initio prediction:Prodigal:2.6"
60 XX
61 SQ Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
62 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc 60
63 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc 120
64 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg 180
65 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt 240
66 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt 300
67 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac 360
68 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa 420
69 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga 480
70 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt 540
71 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga 600
72 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga 660
73 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag 720
74 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt 780
75 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga 840
76 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc 900
77 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc 960
78 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa 1020
79 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat 1080
80 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat 1140
81 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa 1200
82 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc 1260
83 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg 1320
84 cttctatttg 1330
85 //