Mercurial > repos > iuc > bandage

annotate test-data/out_standard.tab @ 6:b9e31c5c01c7 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit fd23651fa43e8eefb7f55032c9ea645083042455"
author iuc
date Sat, 27 Nov 2021 10:09:14 +0000
parents d8b1027d6ce0
children ddddce450736
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5
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
diff changeset
1 Node count: 455
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
diff changeset
2 Edge count: 1061
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
diff changeset
3 Smallest edge overlap (bp): 3348
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
diff changeset
4 Largest edge overlap (bp): 4532
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
diff changeset
5 Total length (bp): 2238438
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
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6 Total length no overlaps (bp): 268863
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
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7 Dead ends: 12
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
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8 Percentage dead ends: 1.31868%
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
diff changeset
9 Connected components: 7
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
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10 Largest component (bp): 1960789
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
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11 Total length orphaned nodes (bp): 1960789
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
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12 N50 (bp): 4421
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
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13 Shortest node (bp): 736
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
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14 Lower quartile node (bp): 4290
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
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15 Median node (bp): 4404
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
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16 Upper quartile node (bp): 4460
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
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17 Longest node (bp): 147170
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
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18 Median depth: 1
d8b1027d6ce0 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit 7823462e83ff5efbcfd3161f7d471fd07da51611"
iuc
parents:
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19 Estimated sequence length (bp): 297647