Mercurial > repos > iuc > bcftools_stats

changeset 11:9c0028888512 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 8f3fe2272c80fdb749db49be689681e4d1391bee"
author iuc
date Wed, 25 Dec 2019 12:28:46 -0500
parents ef2cc5ac23bc
children b17394940c7a
files bcftools_stats.xml macros.xml
diffstat 2 files changed, 5 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/bcftools_stats.xml	Thu Oct 17 02:44:59 2019 -0400
+++ b/bcftools_stats.xml	Wed Dec 25 12:28:46 2019 -0500
@@ -1,5 +1,5 @@
 <?xml version='1.0' encoding='utf-8'?>
-<tool name="bcftools @EXECUTABLE@" id="bcftools_@EXECUTABLE@" version="@TOOL_VERSION@+galaxy1">
+<tool name="bcftools @EXECUTABLE@" id="bcftools_@EXECUTABLE@" version="@TOOL_VERSION@" profile="18.01">
     <description>Parses VCF or BCF and produces stats which can be plotted using plot-vcfstats</description>
     <macros>
         <token name="@EXECUTABLE@">stats</token>
@@ -195,7 +195,7 @@
                     <has_text_matching expression="ST\t0\tA>C\t16"/>
                 </assert_contents>
             </output>
-            <output name="output_pdf" file="summary.pdf" compare="sim_size" delta="20000" />
+            <output name="output_pdf" file="summary.pdf" compare="sim_size" delta="25000" />
         </test>
     </tests>
     <help><![CDATA[
--- a/macros.xml	Thu Oct 17 02:44:59 2019 -0400
+++ b/macros.xml	Wed Dec 25 12:28:46 2019 -0500
@@ -1,14 +1,14 @@
 <macros>
-  <token name="@TOOL_VERSION@">1.9</token>
+  <token name="@TOOL_VERSION@">1.10</token>
   <xml name="requirements">
     <requirements>
       <requirement type="package" version="@TOOL_VERSION@">bcftools</requirement>
-      <requirement type="package" version="1.9">htslib</requirement>
+      <requirement type="package" version="1.10">htslib</requirement>
       <yield />
     </requirements>
   </xml>
   <xml name="samtools_requirement">
-      <requirement type="package" version="1.9">samtools</requirement>
+      <requirement type="package" version="1.10">samtools</requirement>
   </xml>
   <xml name="matplotlib_requirement">
       <requirement type="package" version="3.1.0">matplotlib</requirement>