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changeset 27:a33db97b220c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 1ec398a9421f016b852fe59d46961c12321ee5c8
author iuc
date Tue, 15 May 2018 14:52:10 -0400
parents 95a3b2c25bd1
children 6283d16e40ed
files bamToBed.xml coverageBed.xml macros.xml
diffstat 3 files changed, 5 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/bamToBed.xml	Thu Apr 26 17:02:46 2018 -0400
+++ b/bamToBed.xml	Tue May 15 14:52:10 2018 -0400
@@ -4,7 +4,7 @@
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements">
-        <requirement type="package" version="1.2">samtools</requirement>
+        <requirement type="package" version="@SAMTOOLS_VERSION@">samtools</requirement>
     </expand>
     <expand macro="stdio" />
     <command>
--- a/coverageBed.xml	Thu Apr 26 17:02:46 2018 -0400
+++ b/coverageBed.xml	Tue May 15 14:52:10 2018 -0400
@@ -3,7 +3,9 @@
     <macros>
         <import>macros.xml</import>
     </macros>
-    <expand macro="requirements" />
+    <expand macro="requirements">
+        <requirement type="package" version="@SAMTOOLS_VERSION@">samtools</requirement>
+    </expand>
     <expand macro="stdio" />
     <command>
 <![CDATA[
--- a/macros.xml	Thu Apr 26 17:02:46 2018 -0400
+++ b/macros.xml	Tue May 15 14:52:10 2018 -0400
@@ -6,6 +6,7 @@
         </requirements>
     </xml>
     <token name="@WRAPPER_VERSION@">2.27.0</token>
+    <token name="@SAMTOOLS_VERSION@">1.2</token>
     <token name="@STD_BEDTOOLS_INPUTS@">bed,bedgraph,gff,vcf</token>
     <token name="@STD_BEDTOOLS_INPUT_LABEL@">bed,bedgraph,gff,vcf</token>
     <xml name="stdio">