Mercurial > repos > iuc > bioext_bam2msa
comparison macros.xml @ 3:b226e0c805a5 draft
"planemo upload for repository https://github.com/davebx/bioext-gx/ commit af3bfbbd3f1236bf96a25bcb8483f2889295ec0c"
author | iuc |
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date | Fri, 20 Aug 2021 21:03:56 +0000 |
parents | 0a4ad829d87a |
children | 27202050e185 |
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2:0a4ad829d87a | 3:b226e0c805a5 |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <macros> | 2 <macros> |
3 <token name="@TOOL_VERSION@">0.20.1</token> | 3 <token name="@TOOL_VERSION@">0.20.1</token> |
4 <token name="@PROFILE@">20.05</token> | 4 <token name="@PROFILE@">20.05</token> |
5 <token name="@SANITIZE@"><![CDATA[| gawk '{ if (\$0 ~ "^[^>]") {a = gensub(/[^ACGTURYKMSWBDHVNacgturykmswbdhvn?-]/, "", "g"); } else {a=gensub(/[^>A-Za-z0-9_]/, "_", "g"); }; print a } ' | sed 's,_\\+,_,g' >]]></token> | |
5 <xml name="requirements"> | 6 <xml name="requirements"> |
6 <requirements> | 7 <requirements> |
7 <requirement type="package" version="@TOOL_VERSION@">python-bioext</requirement> | 8 <requirement type="package" version="@TOOL_VERSION@">python-bioext</requirement> |
8 <yield /> | 9 <yield /> |
9 </requirements> | 10 </requirements> |