Mercurial > repos > iuc > busco

annotate test-data/transcriptome_results/short_summary @ 19:2a5b8b9936bf draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit a01d758e10182682225b368696791dd39d6cc820
author iuc
date Tue, 14 Nov 2023 13:03:37 +0000
parents bb935709506a
children ea8146ee148f
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2a5b8b9936bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit a01d758e10182682225b368696791dd39d6cc820
iuc
parents: 16
diff changeset
1 # BUSCO version is: 5.5.0
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2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
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2 # The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of genomes: 90, number of BUSCOs: 1013)
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2a5b8b9936bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit a01d758e10182682225b368696791dd39d6cc820
iuc
parents: 16
diff changeset
3 # Summarized benchmarking in BUSCO notation for file /tmp/tmp5_syjrgy/files/4/3/b/dataset_43bb7c5f-29dc-4638-a19d-abb98c145794.dat
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bb935709506a planemo upload commit f7f94fe1eccafe1e29657bbd79197b4b32e03ffe
iuc
parents: 10
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4 # BUSCO was run in mode: euk_tran
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4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
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6 ***** Results: *****
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8 C:0.1%[S:0.1%,D:0.0%],F:0.0%,M:99.9%,n:1013
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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9 1 Complete BUSCOs (C)
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
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10 1 Complete and single-copy BUSCOs (S)
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
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11 0 Complete and duplicated BUSCOs (D)
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents: 2
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12 0 Fragmented BUSCOs (F)
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents: 2
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13 1012 Missing BUSCOs (M)
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14 1013 Total BUSCO groups searched
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16 Dependencies and versions:
2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
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17 hmmsearch: 3.1
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bb935709506a planemo upload commit f7f94fe1eccafe1e29657bbd79197b4b32e03ffe
iuc
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18 metaeuk: 6.a5d39d9
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2a5b8b9936bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit a01d758e10182682225b368696791dd39d6cc820
iuc
parents: 16
diff changeset
19 busco: 5.5.0