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annotate macros.xml @ 7:4048d82f0c88 draft

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"planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
author iuc
date Mon, 17 Aug 2020 06:50:18 -0400
parents
children 602fb8e63aa7
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1 <?xml version="1.0"?>
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2 <macros>
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3 <token name="@TOOL_VERSION@">4.1.2</token>
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4
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5 <xml name="citations">
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6 <citations>
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7 <citation type="doi">10.1093/bioinformatics/btv351</citation>
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8 </citations>
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9 </xml>
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10
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11 <xml name="augustus_species">
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12 <!-- If you update this list, please also update it in maker and augustus tools (../maker/maker.xml and ../augustus/augustus.xml) -->
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13 <option value="human">Homo sapiens</option>
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14 <option value="fly">Drosophila melanogaster</option>
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15 <option value="arabidopsis">Arabidopsis thaliana</option>
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16 <option value="brugia ">Brugia malayi</option>
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17 <option value="aedes">Aedes aegypti</option>
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18 <option value="tribolium2012">Tribolium castaneum</option>
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19 <option value="schistosoma">Schistosoma mansoni</option>
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20 <option value="tetrahymena">Tetrahymena thermophila</option>
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21 <option value="galdieria">Galdieria sulphuraria</option>
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22 <option value="maize">Zea mays</option>
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23 <option value="toxoplasma">Toxoplasma gondii</option>
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24 <option value="caenorhabditis ">Caenorhabditis elegans</option>
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25 <option value="aspergillus_fumigatus">Aspergillus fumigatus</option>
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26 <option value="aspergillus_nidulans ">Aspergillus nidulans</option>
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27 <option value="aspergillus_oryzae ">Aspergillus oryzae</option>
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28 <option value="aspergillus_terreus">Aspergillus terreus</option>
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29 <option value="botrytis_cinerea ">Botrytis cinerea</option>
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30 <option value="candida_albicans ">Candida albicans</option>
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31 <option value="candida_guilliermondii ">Candida guilliermondii</option>
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32 <option value="candida_tropicalis ">Candida tropicalis</option>
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33 <option value="chaetomium_globosum">Chaetomium globosum</option>
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34 <option value="coccidioides_immitis">Coccidioides immitis</option>
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35 <option value="coprinus">Coprinus cinereus</option>
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36 <option value="coprinus_cinereus">Coprinus cinereus</option>
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37 <option value="cryptococcus_neoformans_gattii">Cryptococcus neoformans gattii</option>
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38 <option value="cryptococcus_neoformans_neoformans_B">Cryptococcus neoformans neoformans</option>
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39 <option value="cryptococcus_neoformans_neoformans_JEC21">Cryptococcus neoformans neoformans</option>
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40 <option value="cryptococcus">Cryptococcus neoformans</option>
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41 <option value="debaryomyces_hansenii">Debaryomyces hansenii</option>
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42 <option value="encephalitozoon_cuniculi_GB">Encephalitozoon cuniculi</option>
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43 <option value="eremothecium_gossypii">Eremothecium gossypii</option>
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44 <option value="fusarium_graminearum ">Fusarium graminearum</option>
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45 <option value="histoplasma_capsulatum ">Histoplasma capsulatum</option>
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46 <option value="histoplasma">Histoplasma capsulatum</option>
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47 <option value="kluyveromyces_lactis ">Kluyveromyces lactis</option>
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48 <option value="laccaria_bicolor ">Laccaria bicolor</option>
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49 <option value="lamprey">Petromyzon marinus</option>
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50 <option value="leishmania_tarentolae">Leishmania tarentolae</option>
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51 <option value="lodderomyces_elongisporus">Lodderomyces elongisporus</option>
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52 <option value="magnaporthe_grisea ">Magnaporthe grisea</option>
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53 <option value="neurospora_crassa">Neurospora crassa</option>
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54 <option value="phanerochaete_chrysosporium">Phanerochaete chrysosporium</option>
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55 <option value="pichia_stipitis">Pichia stipitis</option>
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56 <option value="rhizopus_oryzae">Rhizopus oryzae</option>
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57 <option value="saccharomyces_cerevisiae_S288C">Saccharomyces cerevisiae</option>
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58 <option value="saccharomyces_cerevisiae_rm11-1a_1">Saccharomyces cerevisiae</option>
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59 <option value="saccharomyces">Saccharomyces cerevisiae</option>
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60 <option value="schizosaccharomyces_pombe">Schizosaccharomyces pombe</option>
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61 <option value="trichinella">Trichinella spiralis</option>
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62 <option value="ustilago_maydis">Ustilago maydis</option>
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63 <option value="yarrowia_lipolytica">Yarrowia lipolytica</option>
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64 <option value="nasonia">Nasonia vitripennis</option>
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65 <option value="tomato">Solanum lycopersicum</option>
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66 <option value="chlamydomonas">Chlamydomonas reinhardtii</option>
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67 <option value="amphimedon">Amphimedon queenslandica</option>
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68 <option value="pneumocystis">Pneumocystis jirovecii</option>
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69 <option value="chicken">Gallus gallus domesticus (chicken)</option>
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70 <option value="cacao">Theobroma cacao (cacao)</option>
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71 <option value="heliconius_melpomene1">Heliconius melpomene</option>
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72 <option value="xenoturbella">Xenoturbella</option>
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73 <option value="E_coli_K12">E coli K12</option>
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74 <option value="c_elegans_trsk">c elegans trsk</option>
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75 <option value="camponotus_floridanus">Camponotus floridanus</option>
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76 <option value="coyote_tobacco">Coyote tobacco</option>
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77 <option value="s_aureus">Staphylococcus aureus</option>
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78 <option value="thermoanaerobacter_tengcongensis">Thermoanaerobacter tengcongensis</option>
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79 <option value="wheat">wheat</option>
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80 <option value="zebrafish">Danio rerio</option>
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81 <option value="anidulans">Aspergillus nidulans</option>
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82 <option value="bombus_impatiens1">Bombus impatiens1</option>
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83 <option value="bombus_terrestris2">Bombus terrestris2</option>
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84 <option value="botrytis_cinerea">Botrytis cinerea</option>
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85 <option value="brugia_malayi">Brugia malayi</option>
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86 <option value="conidiobolus_coronatus">Conidiobolus coronatus</option>
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87 <option value="cryptococcus_neoformans">Cryptococcus neoformans</option>
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88 <option value="culex_pipiens">Culex pipiens</option>
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89 <option value="elephant_shark">Callorhinchus milii</option>
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90 <option value="honeybee1">Apis mellifera</option>
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91 <option value="phanerochaete_chrysosporium">Phanerochaete chrysosporium</option>
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92 <option value="pea_aphid">Acyrthosiphon pisum</option>
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93 <option value="rhodnius_prolixus">Rhodnius prolixus</option>
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94 <option value="ustilago_maydis">Ustilago maydis</option>
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95 <option value="verticillium_albo_atrum1">Verticillium albo atrum1</option>
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96 <option value="verticillium_longisporum1">Verticillium longisporum1</option>
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97 <option value="Xipophorus_maculatus">Xipophorus_maculatus</option>
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98 <option value="adorsata">adorsata</option>
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99 <option value="ancylostoma_ceylanicum">ancylostoma_ceylanicum</option>
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100 <option value="maker2_athal1">maker2_athal1</option>
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101 <option value="maker2_c_elegans1">maker2_c_elegans1</option>
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102 <option value="maker2_dmel1">maker2_dmel1</option>
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103 <option value="maker2_spomb1">maker2_spomb1</option>
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104 <option value="parasteatoda">parasteatoda</option>
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105 <option value="rice">rice</option>
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106 <option value="schistosoma2">schistosoma2</option>
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107 <option value="sulfolobus_solfataricus">sulfolobus_solfataricus</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
108 </xml>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
109
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
110 <xml name="lineages">
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
111 <option value="acidobacteria_odb10">Acidobacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
112 <option value="aconoidasida_odb10">Aconoidasida</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
113 <option value="actinobacteria_class_odb10">Actinobacteria class</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
114 <option value="actinobacteria_phylum_odb10">Actinobacteria phylum</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
115 <option value="actinopterygii_odb10">Actinopterygii</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
116 <option value="agaricales_odb10">Agaricales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
117 <option value="agaricomycetes_odb10">Agaricomycetes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
118 <option value="alphaproteobacteria_odb10">Alphaproteobacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
119 <option value="alteromonadales_odb10">Alteromonadales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
120 <option value="alveolata_odb10">Alveolata</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
121 <option value="apicomplexa_odb10">Apicomplexa</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
122 <option value="aquificae_odb10">Aquificae</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
123 <option value="arachnida_odb10">Arachnida</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
124 <option value="archaea_odb10">Archaea</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
125 <option value="arthropoda_odb10">Arthropoda</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
126 <option value="ascomycota_odb10">Ascomycota</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
127 <option value="aves_odb10">Aves</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
128 <option value="bacillales_odb10">Bacillales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
129 <option value="bacilli_odb10">Bacilli</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
130 <option value="bacteria_odb10">Bacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
131 <option value="bacteroidales_odb10">Bacteroidales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
132 <option value="bacteroidetes-chlorobi_group_odb10">Bacteroidetes-chlorobi group</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
133 <option value="bacteroidetes_odb10">Bacteroidetes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
134 <option value="bacteroidia_odb10">Bacteroidia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
135 <option value="basidiomycota_odb10">Basidiomycota</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
136 <option value="betaproteobacteria_odb10">Betaproteobacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
137 <option value="boletales_odb10">Boletales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
138 <option value="brassicales_odb10">Brassicales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
139 <option value="burkholderiales_odb10">Burkholderiales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
140 <option value="campylobacterales_odb10">Campylobacterales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
141 <option value="capnodiales_odb10">Capnodiales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
142 <option value="carnivora_odb10">Carnivora</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
143 <option value="cellvibrionales_odb10">Cellvibrionales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
144 <option value="cetartiodactyla_odb10">Cetartiodactyla</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
145 <option value="chaetothyriales_odb10">Chaetothyriales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
146 <option value="chlamydiae_odb10">Chlamydiae</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
147 <option value="chlorobi_odb10">Chlorobi</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
148 <option value="chloroflexi_odb10">Chloroflexi</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
149 <option value="chlorophyta_odb10">Chlorophyta</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
150 <option value="chromatiales_odb10">Chromatiales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
151 <option value="chroococcales_odb10">Chroococcales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
152 <option value="clostridia_odb10">Clostridia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
153 <option value="clostridiales_odb10">Clostridiales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
154 <option value="coccidia_odb10">Coccidia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
155 <option value="coriobacteriales_odb10">Coriobacteriales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
156 <option value="coriobacteriia_odb10">Coriobacteriia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
157 <option value="corynebacteriales_odb10">Corynebacteriales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
158 <option value="cyanobacteria_odb10">Cyanobacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
159 <option value="cyprinodontiformes_odb10">Cyprinodontiformes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
160 <option value="cytophagales_odb10">Cytophagales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
161 <option value="cytophagia_odb10">Cytophagia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
162 <option value="delta-epsilon-subdivisions_odb10">Delta-epsilon-subdivisions</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
163 <option value="deltaproteobacteria_odb10">Deltaproteobacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
164 <option value="desulfobacterales_odb10">Desulfobacterales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
165 <option value="desulfovibrionales_odb10">Desulfovibrionales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
166 <option value="desulfurococcales_odb10">Desulfurococcales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
167 <option value="desulfuromonadales_odb10">Desulfuromonadales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
168 <option value="diptera_odb10">Diptera</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
169 <option value="dothideomycetes_odb10">Dothideomycetes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
170 <option value="embryophyta_odb10">Embryophyta</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
171 <option value="endopterygota_odb10">Endopterygota</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
172 <option value="enterobacterales_odb10">Enterobacterales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
173 <option value="entomoplasmatales_odb10">Entomoplasmatales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
174 <option value="epsilonproteobacteria_odb10">Epsilonproteobacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
175 <option value="euarchontoglires_odb10">Euarchontoglires</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
176 <option value="eudicots_odb10">Eudicots</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
177 <option value="euglenozoa_odb10">Euglenozoa</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
178 <option value="eukaryota_odb10">Eukaryota</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
179 <option value="eurotiales_odb10">Eurotiales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
180 <option value="eurotiomycetes_odb10">Eurotiomycetes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
181 <option value="euryarchaeota_odb10">Euryarchaeota</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
182 <option value="eutheria_odb10">Eutheria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
183 <option value="fabales_odb10">Fabales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
184 <option value="firmicutes_odb10">Firmicutes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
185 <option value="flavobacteriales_odb10">Flavobacteriales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
186 <option value="flavobacteriia_odb10">Flavobacteriia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
187 <option value="fungi_odb10">Fungi</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
188 <option value="fusobacteria_odb10">Fusobacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
189 <option value="fusobacteriales_odb10">Fusobacteriales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
190 <option value="gammaproteobacteria_odb10">Gammaproteobacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
191 <option value="glires_odb10">Glires</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
192 <option value="glomerellales_odb10">Glomerellales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
193 <option value="halobacteria_odb10">Halobacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
194 <option value="halobacteriales_odb10">Halobacteriales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
195 <option value="haloferacales_odb10">Haloferacales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
196 <option value="helotiales_odb10">Helotiales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
197 <option value="hemiptera_odb10">Hemiptera</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
198 <option value="hymenoptera_odb10">Hymenoptera</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
199 <option value="hypocreales_odb10">Hypocreales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
200 <option value="insecta_odb10">Insecta</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
201 <option value="lactobacillales_odb10">Lactobacillales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
202 <option value="laurasiatheria_odb10">Laurasiatheria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
203 <option value="legionellales_odb10">Legionellales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
204 <option value="leotiomycetes_odb10">Leotiomycetes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
205 <option value="lepidoptera_odb10">Lepidoptera</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
206 <option value="liliopsida_odb10">Liliopsida</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
207 <option value="mammalia_odb10">Mammalia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
208 <option value="metazoa_odb10">Metazoa</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
209 <option value="methanobacteria_odb10">Methanobacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
210 <option value="methanococcales_odb10">Methanococcales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
211 <option value="methanomicrobia_odb10">Methanomicrobia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
212 <option value="methanomicrobiales_odb10">Methanomicrobiales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
213 <option value="micrococcales_odb10">Micrococcales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
214 <option value="microsporidia_odb10">Microsporidia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
215 <option value="mollicutes_odb10">Mollicutes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
216 <option value="mollusca_odb10">Mollusca</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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217 <option value="mucorales_odb10">Mucorales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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218 <option value="mucoromycota_odb10">Mucoromycota</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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219 <option value="mycoplasmatales_odb10">Mycoplasmatales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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220 <option value="natrialbales_odb10">Natrialbales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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221 <option value="neisseriales_odb10">Neisseriales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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222 <option value="nematoda_odb10">Nematoda</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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223 <option value="nitrosomonadales_odb10">Nitrosomonadales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
diff changeset
224 <option value="nostocales_odb10">Nostocales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
diff changeset
225 <option value="oceanospirillales_odb10">Oceanospirillales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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226 <option value="onygenales_odb10">Onygenales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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227 <option value="oscillatoriales_odb10">Oscillatoriales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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228 <option value="passeriformes_odb10">Passeriformes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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229 <option value="pasteurellales_odb10">Pasteurellales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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230 <option value="planctomycetes_odb10">Planctomycetes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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231 <option value="plasmodium_odb10">Plasmodium</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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232 <option value="pleosporales_odb10">Pleosporales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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233 <option value="poales_odb10">Poales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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234 <option value="polyporales_odb10">Polyporales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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235 <option value="primates_odb10">Primates</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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236 <option value="propionibacteriales_odb10">Propionibacteriales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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237 <option value="proteobacteria_odb10">Proteobacteria</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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238 <option value="pseudomonadales_odb10">Pseudomonadales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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239 <option value="rhizobiales_odb10">Rhizobiales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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240 <option value="rhizobium-agrobacterium_group_odb10">Rhizobium-agrobacterium group</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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241 <option value="rhodobacterales_odb10">Rhodobacterales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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242 <option value="rhodospirillales_odb10">Rhodospirillales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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243 <option value="rickettsiales_odb10">Rickettsiales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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244 <option value="saccharomycetes_odb10">Saccharomycetes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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245 <option value="sauropsida_odb10">Sauropsida</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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246 <option value="selenomonadales_odb10">Selenomonadales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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247 <option value="solanales_odb10">Solanales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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248 <option value="sordariomycetes_odb10">Sordariomycetes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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249 <option value="sphingobacteriia_odb10">Sphingobacteriia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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250 <option value="sphingomonadales_odb10">Sphingomonadales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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251 <option value="spirochaetales_odb10">Spirochaetales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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252 <option value="spirochaetes_odb10">Spirochaetes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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253 <option value="spirochaetia_odb10">Spirochaetia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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254 <option value="stramenopiles_odb10">Stramenopiles</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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255 <option value="streptomycetales_odb10">Streptomycetales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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256 <option value="streptosporangiales_odb10">Streptosporangiales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
diff changeset
257 <option value="sulfolobales_odb10">Sulfolobales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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258 <option value="synechococcales_odb10">Synechococcales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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259 <option value="synergistetes_odb10">Synergistetes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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260 <option value="tenericutes_odb10">Tenericutes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
diff changeset
261 <option value="tetrapoda_odb10">Tetrapoda</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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262 <option value="thaumarchaeota_odb10">Thaumarchaeota</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
diff changeset
263 <option value="thermoanaerobacterales_odb10">Thermoanaerobacterales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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264 <option value="thermoplasmata_odb10">Thermoplasmata</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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265 <option value="thermoproteales_odb10">Thermoproteales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
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parents:
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266 <option value="thermoprotei_odb10">Thermoprotei</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
267 <option value="thermotogae_odb10">Thermotogae</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
268 <option value="thiotrichales_odb10">Thiotrichales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
269 <option value="tissierellales_odb10">Tissierellales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
270 <option value="tissierellia_odb10">Tissierellia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
271 <option value="tremellomycetes_odb10">Tremellomycetes</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
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272 <option value="verrucomicrobia_odb10">Verrucomicrobia</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
273 <option value="vertebrata_odb10">Vertebrata</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
274 <option value="vibrionales_odb10">Vibrionales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
275 <option value="viridiplantae_odb10">Viridiplantae</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
diff changeset
276 <option value="xanthomonadales_odb10">Xanthomonadales</option>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
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277 </xml>
4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents:
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278 </macros>