Mercurial > repos > iuc > busco

annotate test-data/genome_results_metaeuk/short_summary @ 15:41030a6c03b7 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit 154d9b1916116b2880f34836d24a76129509086f"
author iuc
date Mon, 11 Apr 2022 09:02:11 +0000
parents 2dd755c1c6ff
children bb935709506a
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
10
2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 9
diff changeset
1 # BUSCO version is: 5.2.1
2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 9
diff changeset
2 # The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of genomes: 90, number of BUSCOs: 1013)
2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 9
diff changeset
3 # Summarized benchmarking in BUSCO notation for file /tmp/tmpctznxi43/files/9/6/4/dataset_96441510-fb85-41dd-a4ce-8a20d74173a9.dat
9
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
4 # BUSCO was run in mode: genome
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
5 # Gene predictor used: metaeuk
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
6
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
7 ***** Results: *****
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
8
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
9 C:0.2%[S:0.2%,D:0.0%],F:0.0%,M:99.8%,n:1013
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
10 2 Complete BUSCOs (C)
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
11 2 Complete and single-copy BUSCOs (S)
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
12 0 Complete and duplicated BUSCOs (D)
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
13 0 Fragmented BUSCOs (F)
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
14 1011 Missing BUSCOs (M)
cf13a1e03e5b "planemo upload commit e9c6496b181bbd2665e953a1f9ede35921707e2a"
iuc
parents:
diff changeset
15 1013 Total BUSCO groups searched
10
2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 9
diff changeset
16
2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 9
diff changeset
17 Dependencies and versions:
2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 9
diff changeset
18 hmmsearch: 3.1
2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 9
diff changeset
19 metaeuk: 4.a0f584d