view test-data/cached_locally/CAT_prepare_test/taxonomy/names.dmp @ 3:51906c8c692a draft default tip

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 47be73f0ca2b3a3bcb79a1fa7cf15a63c7facd19
author iuc
date Fri, 16 Feb 2024 10:45:18 +0000
parents b6c5e7343617
children
line wrap: on
line source

1	|	all	|		|	synonym	|
1	|	root	|		|	scientific name	|
2	|	Bacteria	|	Bacteria <prokaryotes>	|	scientific name	|
2	|	Monera	|	Monera <Bacteria>	|	in-part	|
2	|	Procaryotae	|	Procaryotae <Bacteria>	|	in-part	|
2	|	Prokaryota	|	Prokaryota <Bacteria>	|	in-part	|
2	|	Prokaryotae	|	Prokaryotae <Bacteria>	|	in-part	|
2	|	bacteria	|	bacteria <blast2>	|	blast name	|
2	|	eubacteria	|		|	genbank common name	|
2	|	prokaryote	|	prokaryote <Bacteria>	|	in-part	|
2	|	prokaryotes	|	prokaryotes <Bacteria>	|	in-part	|
641	|	Vibrionaceae	|		|	scientific name	|
641	|	Vibrionaceae Veron 1965	|		|	authority	|
641	|	gamma-3 proteobacteria	|	gamma-3 proteobacteria <#3>	|	in-part	|
662	|	"Microspira" Schroeter 1886	|		|	authority	|
662	|	"Pacinia" Trevisan 1885	|		|	authority	|
662	|	Beneckea	|		|	synonym	|
662	|	Beneckea Campbell 1957	|		|	authority	|
662	|	Listonella	|		|	synonym	|
662	|	Listonella MacDonell and Colwell 1986	|		|	authority	|
662	|	Microspira	|		|	synonym	|
662	|	Pacinia	|		|	synonym	|
662	|	Vibrio	|		|	scientific name	|
662	|	Vibrio Pacini 1854	|		|	authority	|
666	|	"Bacillo virgola del Koch" Trevisan 1884	|		|	authority	|
666	|	"Bacillus cholerae" (Pacini 1854) Trevisan 1884	|		|	authority	|
666	|	"Bacillus cholerae-asiaticae" Trevisan 1884	|		|	authority	|
666	|	"Kommabacillus" Koch 1884	|		|	authority	|
666	|	"Liquidivibrio cholerae" (Pacini 1854) Orla-Jensen 1909	|		|	authority	|
666	|	"Microspira comma" Schroeter 1886	|		|	authority	|
666	|	"Pacinia cholerae-asiaticae" (Trevisan 1884) Trevisan 1885	|		|	authority	|
666	|	"Spirillum cholerae" (Pacini 1854) Mac1889	|		|	authority	|
666	|	"Spirillum cholerae-asiaticae" (Trevisan 1884) Zopf 1885	|		|	authority	|
666	|	"Vibrio cholera" (sic) Pacini 1854	|		|	authority	|
666	|	"Vibrio cholerae-asiaticae" (Trevisan 1884) Pfeiffer 1896	|		|	authority	|
666	|	"Vibrio comma" (Schroeter 1886) Blanchard 1906	|		|	authority	|
666	|	ATCC 14035	|	ATCC 14035 <type strain>	|	type material	|
666	|	ATCC 14547 [[Vibrio albensis]]	|	ATCC 14547 [[Vibrio albensis]] <type strain>	|	type material	|
666	|	Bacillo virgola del Koch	|		|	synonym	|
666	|	Bacillus cholerae	|		|	synonym	|
666	|	Bacillus cholerae-asiaticae	|		|	synonym	|
666	|	CCUG 48664 [[Vibrio albensis]]	|	CCUG 48664 [[Vibrio albensis]] <type strain>	|	type material	|
666	|	CCUG 9118 A	|	CCUG 9118 A <type strain>	|	type material	|
666	|	CECT 514	|	CECT 514 <type strain>	|	type material	|
666	|	CIP 62.13	|	CIP 62.13 <type strain>	|	type material	|
666	|	Kommabacillus	|		|	synonym	|
666	|	LMG 4406 [[Vibrio albensis]]	|	LMG 4406 [[Vibrio albensis]] <type strain>	|	type material	|
666	|	LMG:4406 [[Vibrio albensis]]	|	LMG:4406 [[Vibrio albensis]] <type strain>	|	type material	|
666	|	Liquidivibrio cholerae	|		|	synonym	|
666	|	Microspira comma	|		|	synonym	|
666	|	NCIMB 41 [[Vibrio albensis]]	|	NCIMB 41 [[Vibrio albensis]] <type strain>	|	type material	|
666	|	NCTC 8021	|	NCTC 8021 <type strain>	|	type material	|
666	|	Pacinia cholerae-asiaticae	|		|	synonym	|
666	|	Spirillum cholerae	|		|	synonym	|
666	|	Spirillum cholerae-asiaticae	|		|	synonym	|
666	|	Vibrio albensis	|		|	synonym	|
666	|	Vibrio albensis Lehmann and Neumann 1896	|		|	authority	|
666	|	Vibrio cholera	|		|	synonym	|
666	|	Vibrio cholerae	|		|	scientific name	|
666	|	Vibrio cholerae Pacini 1854	|		|	authority	|
666	|	Vibrio cholerae biovar albensis	|		|	synonym	|
666	|	Vibrio cholerae bv. albensis	|		|	synonym	|
666	|	Vibrio cholerae-asiaticae	|		|	synonym	|
666	|	Vibrio comma	|		|	synonym	|
1224	|	Alphaproteobacteraeota	|		|	synonym	|
1224	|	Alphaproteobacteraeota Oren et al. 2015	|		|	authority	|
1224	|	Alphaproteobacteriota	|		|	synonym	|
1224	|	Proteobacteria	|		|	scientific name	|
1224	|	Proteobacteria Garrity et al. 2005	|		|	authority	|
1224	|	Proteobacteria [class] Stackebrandt et al. 1988	|		|	authority	|
1224	|	proteobacteria	|	proteobacteria <blast1224>	|	blast name	|
1224	|	purple bacteria	|		|	common name	|
1224	|	purple bacteria and relatives	|		|	common name	|
1224	|	purple non-sulfur bacteria	|		|	common name	|
1224	|	purple photosynthetic bacteria	|		|	common name	|
1224	|	purple photosynthetic bacteria and relatives	|		|	common name	|
1236	|	Gammaproteobacteria	|		|	scientific name	|
1236	|	Gammaproteobacteria Garrity et al. 2005 emend. Williams and Kelly 2013	|		|	authority	|
1236	|	Proteobacteria gamma subdivision	|		|	synonym	|
1236	|	Purple bacteria, gamma subdivision	|		|	synonym	|
1236	|	g-proteobacteria	|		|	blast name	|
1236	|	gamma proteobacteria	|		|	synonym	|
1236	|	gamma subdivision	|		|	synonym	|
1236	|	gamma subgroup	|		|	synonym	|
1239	|	Bacillaeota	|		|	synonym	|
1239	|	Bacillaeota Oren et al. 2015	|		|	authority	|
1239	|	Bacillota	|		|	synonym	|
1239	|	Bacillus/Clostridium group	|		|	synonym	|
1239	|	Clostridium group firmicutes	|		|	synonym	|
1239	|	Firmacutes	|		|	synonym	|
1239	|	Firmicutes	|		|	scientific name	|
1239	|	Firmicutes corrig. Gibbons and Murray 1978	|		|	authority	|
1239	|	Low G+C firmicutes	|		|	synonym	|
1239	|	clostridial firmicutes	|		|	synonym	|
1239	|	firmicutes	|	firmicutes <blast1239>	|	blast name	|
1239	|	low G+C Gram-positive bacteria	|		|	common name	|
1239	|	low GC Gram+	|		|	common name	|
1385	|	Bacillales	|		|	scientific name	|
1385	|	Bacillales Prevot 1953	|		|	authority	|
1385	|	Bacillus/Staphylococcus group	|		|	synonym	|
1637	|	"Listerella" Pirie 1927 (nom. rej. Opin. 14)	|		|	authority	|
1637	|	Listerella	|		|	synonym	|
1637	|	Listeria	|		|	scientific name	|
1637	|	Listeria Pirie 1940	|		|	authority	|
1639	|	"Bacterium monocytogenes hominis" Nyfeldt 1932	|		|	authority	|
1639	|	"Bacterium monocytogenes" Murray et al. 1926	|		|	authority	|
1639	|	"Corynebacterium infantisepticum" Potel 1950	|		|	authority	|
1639	|	"Corynebacterium parvulum" Schultz et al. 1934	|		|	authority	|
1639	|	"Erysipelothrix monocytogenes" (Murray et al. 1926) Wilson and Miles 1946	|		|	authority	|
1639	|	"Listerella hepatolytica" Pirie 1927	|		|	authority	|
1639	|	ATCC 15313	|	ATCC 15313 <type strain>	|	type material	|
1639	|	Bacterium monocytogenes	|		|	synonym	|
1639	|	Bacterium monocytogenes hominis	|		|	synonym	|
1639	|	CCUG 15526	|	CCUG 15526 <type strain>	|	type material	|
1639	|	CIP 82.110	|	CIP 82.110 <type strain>	|	type material	|
1639	|	Corynebacterium infantisepticum	|		|	synonym	|
1639	|	Corynebacterium parvulum	|		|	synonym	|
1639	|	DSM 20600	|	DSM 20600 <type strain>	|	type material	|
1639	|	Erysipelothrix monocytogenes	|		|	synonym	|
1639	|	Listerella hepatolytica	|		|	synonym	|
1639	|	Listeria monocytogenes	|		|	scientific name	|
1639	|	Listeria monocytogenes (Murray et al. 1926) Pirie 1940	|		|	authority	|
1639	|	Listeria sp. FDA00013359	|		|	includes	|
1639	|	Listeria sp. FDA00013360	|		|	includes	|
1639	|	Listeria sp. FDA00013361	|		|	includes	|
1639	|	Listeria sp. FDA00013362	|		|	includes	|
1639	|	Listeria sp. FDA00013363	|		|	includes	|
1639	|	Listeria sp. FDA00013364	|		|	includes	|
1639	|	Listeria sp. FDA00013365	|		|	includes	|
1639	|	Listeria sp. FDA00013366	|		|	includes	|
1639	|	Listeria sp. FDA00013367	|		|	includes	|
1639	|	Listeria sp. FDA00013503	|		|	includes	|
1639	|	Listeria sp. FDA00013504	|		|	includes	|
1639	|	Listeria sp. FDA00013505	|		|	includes	|
1639	|	Listeria sp. FDA00013506	|		|	includes	|
1639	|	Listeria sp. FDA00013507	|		|	includes	|
1639	|	Listeria sp. FDA00013508	|		|	includes	|
1639	|	Listeria sp. FDA00013509	|		|	includes	|
1639	|	Listeria sp. FDA00013510	|		|	includes	|
1639	|	Listeria sp. FDA00013511	|		|	includes	|
1639	|	Listeria sp. FDA00013512	|		|	includes	|
1639	|	Listeria sp. FDA00013536	|		|	includes	|
1639	|	Listeria sp. FDA00013537	|		|	includes	|
1639	|	Listeria sp. FDA00013538	|		|	includes	|
1639	|	Listeria sp. FDA00013539	|		|	includes	|
1639	|	Listeria sp. FDA00013540	|		|	includes	|
1639	|	Listeria sp. FDA00013541	|		|	includes	|
1639	|	Listeria sp. FDA00013542	|		|	includes	|
1639	|	Listeria sp. FDA00013543	|		|	includes	|
1639	|	Listeria sp. FDA00013544	|		|	includes	|
1639	|	Listeria sp. FDA00013545	|		|	includes	|
1639	|	Listeria sp. FDA00013546	|		|	includes	|
1639	|	Listeria sp. FDA00013547	|		|	includes	|
1639	|	Listeria sp. FDA00013548	|		|	includes	|
1639	|	Listeria sp. FDA00013549	|		|	includes	|
1639	|	Listeria sp. FDA00013550	|		|	includes	|
1639	|	Listeria sp. FDA00013551	|		|	includes	|
1639	|	Listeria sp. FDA00013552	|		|	includes	|
1639	|	Listeria sp. FDA00013553	|		|	includes	|
1639	|	Listeria sp. FDA00013554	|		|	includes	|
1639	|	Listeria sp. FDA00013555	|		|	includes	|
1639	|	Listeria sp. FDA00013556	|		|	includes	|
1639	|	Listeria sp. FDA00013557	|		|	includes	|
1639	|	Listeria sp. FDA00013558	|		|	includes	|
1639	|	Listeria sp. FDA00013559	|		|	includes	|
1639	|	Listeria sp. FDA00013560	|		|	includes	|
1639	|	Listeria sp. FDA00013561	|		|	includes	|
1639	|	Listeria sp. FDA00013562	|		|	includes	|
1639	|	Listeria sp. FDA00013563	|		|	includes	|
1639	|	Listeria sp. FDA00013564	|		|	includes	|
1639	|	Listeria sp. FDA00013565	|		|	includes	|
1639	|	Listeria sp. FDA00013566	|		|	includes	|
1639	|	Listeria sp. FDA00013567	|		|	includes	|
1639	|	Listeria sp. FDA00013568	|		|	includes	|
1639	|	Listeria sp. FDA00013570	|		|	includes	|
1639	|	Listeria sp. FDA00013571	|		|	includes	|
1639	|	Listeria sp. FDA00013572	|		|	includes	|
1639	|	Listeria sp. FDA00013573	|		|	includes	|
1639	|	Listeria sp. FDA00013574	|		|	includes	|
1639	|	Listeria sp. FDA00013575	|		|	includes	|
1639	|	Listeria sp. FDA00013576	|		|	includes	|
1639	|	Listeria sp. FDA00013577	|		|	includes	|
1639	|	Listeria sp. FDA00013578	|		|	includes	|
1639	|	Listeria sp. FDA00013579	|		|	includes	|
1639	|	Listeria sp. FDA00013607	|		|	includes	|
1639	|	NCTC 10357	|	NCTC 10357 <type strain>	|	type material	|
1639	|	SLCC 53	|	SLCC 53 <type strain>	|	type material	|
2157	|	"Archaea" Woese et al. 1990	|		|	authority	|
2157	|	"Archaebacteria" (sic) Woese and Fox 1977	|		|	authority	|
2157	|	Archaea	|		|	scientific name	|
2157	|	Archaebacteria	|		|	synonym	|
2157	|	Mendosicutes	|		|	synonym	|
2157	|	Metabacteria	|		|	synonym	|
2157	|	Monera	|	Monera <Archaea>	|	in-part	|
2157	|	Procaryotae	|	Procaryotae <Archaea>	|	in-part	|
2157	|	Prokaryota	|	Prokaryota <Archaea>	|	in-part	|
2157	|	Prokaryotae	|	Prokaryotae <Archaea>	|	in-part	|
2157	|	archaea	|	archaea <blast2157>	|	blast name	|
2157	|	prokaryote	|	prokaryote <Archaea>	|	in-part	|
2157	|	prokaryotes	|	prokaryotes <Archaea>	|	in-part	|
2158	|	Methanobacteriales	|		|	scientific name	|
2158	|	Methanobacteriales Balch and Wolfe 1981	|		|	authority	|
2159	|	Methanobacteriaceae	|		|	scientific name	|
2159	|	Methanobacteriaceae Barker 1956	|		|	authority	|
2172	|	Methanobrevibacter	|		|	scientific name	|
2172	|	Methanobrevibacter Balch and Wolfe 1981	|		|	authority	|
28890	|	"Euryarchaeota" Woese et al. 1990	|		|	authority	|
28890	|	Euryarchaeota	|		|	scientific name	|
28890	|	Euryarchaeota Garrity and Holt 2002	|		|	authority	|
28890	|	Methanobacteraeota	|		|	synonym	|
28890	|	Methanobacteraeota Oren et al. 2015	|		|	authority	|
28890	|	Methanobacteriota	|		|	synonym	|
28890	|	euryarchaeotes	|	euryarchaeotes <blast28890>	|	blast name	|
83816	|	ATCC 35063	|	ATCC 35063 <type strain>	|	type material	|
83816	|	DSM 1093	|	DSM 1093 <type strain>	|	type material	|
83816	|	JCM 13430	|	JCM 13430 <type strain>	|	type material	|
83816	|	Methanobacterium ruminantium	|		|	synonym	|
83816	|	Methanobacterium ruminantium Smith and Hungate 1958 (Approved Lists 1980)	|		|	authority	|
83816	|	Methanobrevibacter ruminantium	|		|	scientific name	|
83816	|	Methanobrevibacter ruminantium (Smith and Hungate 1958) Balch and Wolfe 1981	|		|	authority	|
83816	|	OCM 146	|	OCM 146 <type strain>	|	type material	|
83816	|	strain M1	|	strain M1 <type strain> <taxid 83816>	|	type material	|
91061	|	Bacilli	|		|	scientific name	|
91061	|	Bacilli Ludwig et al. 2010	|		|	authority	|
91061	|	Bacillus/Lactobacillus/Streptococcus group	|		|	synonym	|
91061	|	Firmibacteria	|		|	synonym	|
91061	|	Firmibacteria Murray 1988	|		|	authority	|
131567	|	biota	|		|	synonym	|
131567	|	cellular organisms	|		|	scientific name	|
135623	|	'Vibrionales'	|		|	synonym	|
135623	|	Vibrionaceae group	|		|	synonym	|
135623	|	Vibrionales	|		|	scientific name	|
183925	|	Archaeobacteria	|		|	synonym	|
183925	|	Archaeobacteria Murray 1988	|		|	authority	|
183925	|	Methanobacteria	|		|	scientific name	|
183925	|	Methanobacteria Boone 2002	|		|	authority	|
183967	|	Thermoplasmata	|		|	scientific name	|
183967	|	Thermoplasmata Reysenbach 2002	|		|	authority	|
186820	|	Listeriaceae	|		|	scientific name	|
186820	|	Listeriaceae Ludwig et al. 2010	|		|	authority	|
1235850	|	"Methanoplasmatales" Paul et al. 2012	|		|	authority	|
1235850	|	Methanomassiliicoccales	|		|	scientific name	|
1235850	|	Methanomassiliicoccales Iino et al. 2013	|		|	authority	|
1235850	|	Methanoplasmatales	|		|	synonym	|
1783272	|	Terrabacteria group	|		|	scientific name	|
2283794	|	"Methanomada" Petitjean et al. 2015	|		|	authority	|
2283794	|	Methanogen Class I	|		|	synonym	|
2283794	|	Methanomada	|		|	equivalent name	|
2283794	|	Methanomada group	|		|	scientific name	|
2283796	|	Diaforarchaea	|		|	equivalent name	|
2283796	|	Diaforarchaea Petijean et al. 2015	|		|	authority	|
2283796	|	Diaforarchaea group	|		|	scientific name	|