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annotate boxplot.r @ 1:344ac3ca7557 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
author iuc
date Wed, 17 Nov 2021 09:06:59 +0000
parents a87a3773d8ed
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a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
diff changeset
1 wrapper <- function(table, columns, options) {
a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
diff changeset
3 # initialize output list
a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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4 l <- list()
a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
diff changeset
6 # loop through all columns
a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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7 for (key in names(columns)) {
a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
diff changeset
8 # load column data
a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
diff changeset
9 column <- as.numeric(columns[key])
a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
diff changeset
10 column_data <- suppressWarnings(as.numeric(as.character(table[column][[1]])))
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344ac3ca7557 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
iuc
parents: 0
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a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
diff changeset
12 # create hist data
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344ac3ca7557 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
iuc
parents: 0
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13 data <- boxplot(column_data, plot = FALSE)
344ac3ca7557 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
iuc
parents: 0
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a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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15 # collect vectors in list
a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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16 l <- append(l, list(data$stats))
a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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17 }
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344ac3ca7557 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
iuc
parents: 0
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a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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19 # return
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344ac3ca7557 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
iuc
parents: 0
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20 return(l)
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a87a3773d8ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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21 }