Mercurial > repos > iuc > cnvkit_segment

diff test-data/sample.cnv.tsv @ 4:c576f0480c66 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
author iuc
date Mon, 20 Jan 2025 16:37:32 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/sample.cnv.tsv	Mon Jan 20 16:37:32 2025 +0000
@@ -0,0 +1,55 @@
+chromosome	start	end	gene	log2	probe
+chrM	848	1121	-	-0.545691	chrM:849-1121
+chrM	1394	1667	-	0.488494	chrM:1395-1667
+chrM	1667	1940	-	0.0200539	chrM:1668-1940
+chrM	2212	2485	-	-0.234816	chrM:2213-2485
+chrM	2485	2758	-	0.153636	chrM:2486-2758
+chrM	2758	3031	-	-1.35597	chrM:2759-3031
+chrM	3031	3304	-	0.385198	chrM:3032-3304
+chrM	3306	3579	-	-1.37983	chrM:3307-3579
+chrM	3579	3853	-	0.471839	chrM:3580-3853
+chrM	3853	4126	-	0.444955	chrM:3854-4126
+chrM	4126	4400	-	0.465611	chrM:4127-4400
+chrM	4401	4695	-	-0.583114	chrM:4402-4695
+chrM	4695	4990	-	1.13235	chrM:4696-4990
+chrM	4990	5284	-	0.209867	chrM:4991-5284
+chrM	5284	5579	-	1.18493	chrM:5285-5579
+chrM	5586	5655	-	-21.0389	chrM:5587-5655
+chrM	5656	5729	-	-19.8096	chrM:5657-5729
+chrM	5760	5891	-	0	chrM:5761-5891
+chrM	5903	6171	-	-0.0283011	chrM:5904-6171
+chrM	6171	6440	-	-0.212606	chrM:6172-6440
+chrM	6440	6708	-	-0.38297	chrM:6441-6708
+chrM	6708	6977	-	-0.317296	chrM:6709-6977
+chrM	6977	7245	-	-0.127011	chrM:6978-7245
+chrM	7245	7514	-	0.72831	chrM:7246-7514
+chrM	7517	7767	-	0.680162	chrM:7518-7767
+chrM	7767	8018	-	-0.510836	chrM:7768-8018
+chrM	8018	8269	-	-0.663743	chrM:8019-8269
+chrM	8365	8630	-	0.28099	chrM:8366-8630
+chrM	8630	8896	-	-0.154606	chrM:8631-8896
+chrM	8896	9162	-	0.147562	chrM:8897-9162
+chrM	9162	9427	-	0.937798	chrM:9163-9427
+chrM	9693	9959	-	0.459741	chrM:9694-9959
+chrM	9959	10224	-	-8.75948	chrM:9960-10224
+chrM	10224	10490	-	0.509209	chrM:10225-10490
+chrM	10490	10756	-	0.0655732	chrM:10491-10756
+chrM	10756	11022	-	0.238204	chrM:10757-11022
+chrM	11022	11287	-	1.20043	chrM:11023-11287
+chrM	11287	11553	-	0.224804	chrM:11288-11553
+chrM	11553	11819	-	-1.50066	chrM:11554-11819
+chrM	11819	12084	-	0.0920864	chrM:11820-12084
+chrM	12084	12350	-	-1.15941	chrM:12085-12350
+chrM	12350	12616	-	-1.25242	chrM:12351-12616
+chrM	12616	12882	-	-0.187246	chrM:12617-12882
+chrM	12882	13147	-	0.419127	chrM:12883-13147
+chrM	13147	13413	-	-0.730007	chrM:13148-13413
+chrM	13413	13679	-	-0.0213761	chrM:13414-13679
+chrM	13944	14210	-	-0.337011	chrM:13945-14210
+chrM	14210	14476	-	-0.0427224	chrM:14211-14476
+chrM	14746	14987	-	0.722701	chrM:14747-14987
+chrM	14987	15228	-	-0.105067	chrM:14988-15228
+chrM	15228	15470	-	-0.96567	chrM:15229-15470
+chrM	15470	15711	-	0.576278	chrM:15471-15711
+chrM	15711	15953	-	-1.38778	chrM:15712-15953
+chrM	15955	16023	-	-21.1972	chrM:15956-16023