Mercurial > repos > iuc > cnvkit_segment

annotate test-data/sample.cnv.tsv @ 4:c576f0480c66 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
author iuc
date Mon, 20 Jan 2025 16:37:32 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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4
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
1 chromosome start end gene log2 probe
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
2 chrM 848 1121 - -0.545691 chrM:849-1121
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
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diff changeset
3 chrM 1394 1667 - 0.488494 chrM:1395-1667
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
4 chrM 1667 1940 - 0.0200539 chrM:1668-1940
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
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diff changeset
5 chrM 2212 2485 - -0.234816 chrM:2213-2485
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
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diff changeset
6 chrM 2485 2758 - 0.153636 chrM:2486-2758
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
7 chrM 2758 3031 - -1.35597 chrM:2759-3031
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
8 chrM 3031 3304 - 0.385198 chrM:3032-3304
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
9 chrM 3306 3579 - -1.37983 chrM:3307-3579
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
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diff changeset
10 chrM 3579 3853 - 0.471839 chrM:3580-3853
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
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diff changeset
11 chrM 3853 4126 - 0.444955 chrM:3854-4126
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
12 chrM 4126 4400 - 0.465611 chrM:4127-4400
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
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diff changeset
13 chrM 4401 4695 - -0.583114 chrM:4402-4695
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
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14 chrM 4695 4990 - 1.13235 chrM:4696-4990
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
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15 chrM 4990 5284 - 0.209867 chrM:4991-5284
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
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16 chrM 5284 5579 - 1.18493 chrM:5285-5579
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
17 chrM 5586 5655 - -21.0389 chrM:5587-5655
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
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diff changeset
18 chrM 5656 5729 - -19.8096 chrM:5657-5729
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
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19 chrM 5760 5891 - 0 chrM:5761-5891
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
20 chrM 5903 6171 - -0.0283011 chrM:5904-6171
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
21 chrM 6171 6440 - -0.212606 chrM:6172-6440
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
22 chrM 6440 6708 - -0.38297 chrM:6441-6708
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
23 chrM 6708 6977 - -0.317296 chrM:6709-6977
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
24 chrM 6977 7245 - -0.127011 chrM:6978-7245
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
25 chrM 7245 7514 - 0.72831 chrM:7246-7514
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
26 chrM 7517 7767 - 0.680162 chrM:7518-7767
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
27 chrM 7767 8018 - -0.510836 chrM:7768-8018
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
28 chrM 8018 8269 - -0.663743 chrM:8019-8269
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
29 chrM 8365 8630 - 0.28099 chrM:8366-8630
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
30 chrM 8630 8896 - -0.154606 chrM:8631-8896
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
31 chrM 8896 9162 - 0.147562 chrM:8897-9162
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
32 chrM 9162 9427 - 0.937798 chrM:9163-9427
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
33 chrM 9693 9959 - 0.459741 chrM:9694-9959
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
34 chrM 9959 10224 - -8.75948 chrM:9960-10224
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
35 chrM 10224 10490 - 0.509209 chrM:10225-10490
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
36 chrM 10490 10756 - 0.0655732 chrM:10491-10756
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
37 chrM 10756 11022 - 0.238204 chrM:10757-11022
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
38 chrM 11022 11287 - 1.20043 chrM:11023-11287
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
39 chrM 11287 11553 - 0.224804 chrM:11288-11553
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
40 chrM 11553 11819 - -1.50066 chrM:11554-11819
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
41 chrM 11819 12084 - 0.0920864 chrM:11820-12084
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
42 chrM 12084 12350 - -1.15941 chrM:12085-12350
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
43 chrM 12350 12616 - -1.25242 chrM:12351-12616
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
44 chrM 12616 12882 - -0.187246 chrM:12617-12882
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
45 chrM 12882 13147 - 0.419127 chrM:12883-13147
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
46 chrM 13147 13413 - -0.730007 chrM:13148-13413
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
47 chrM 13413 13679 - -0.0213761 chrM:13414-13679
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
48 chrM 13944 14210 - -0.337011 chrM:13945-14210
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
49 chrM 14210 14476 - -0.0427224 chrM:14211-14476
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
50 chrM 14746 14987 - 0.722701 chrM:14747-14987
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
51 chrM 14987 15228 - -0.105067 chrM:14988-15228
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
52 chrM 15228 15470 - -0.96567 chrM:15229-15470
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
53 chrM 15470 15711 - 0.576278 chrM:15471-15711
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
54 chrM 15711 15953 - -1.38778 chrM:15712-15953
c576f0480c66 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 51995527835d18a4a3a498b140382ce433f19a71
iuc
parents:
diff changeset
55 chrM 15955 16023 - -21.1972 chrM:15956-16023