Mercurial > repos > iuc > dada2_mergepairs

diff dada2_mergePairs.xml @ 2:69900ffd3b8e draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit f2a33fe115fef9d711112b53136cf7619f1b19be"
author iuc
date Mon, 16 Mar 2020 08:22:08 -0400
parents b1e55c248f17
children 84743da21318
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line diff
--- a/dada2_mergePairs.xml	Thu Dec 05 18:01:42 2019 -0500
+++ b/dada2_mergePairs.xml	Mon Mar 16 08:22:08 2020 -0400
@@ -40,19 +40,19 @@
     </outputs>
     <tests>
         <test>
-            <param name="dadaF" ftype="dada2_dada" value="dada_F3D0_R1.Rdata"/>
+            <param name="dadaF" ftype="dada2_dada" value="dada_F3D0_S188_L001_R1.Rdata"/>
             <param name="derepF" ftype="fastq.gz" value="filterAndTrim_F3D0_R1.fq.gz"/>
-            <param name="dadaR" ftype="dada2_dada" value="dada_F3D0_R2.Rdata"/>
+            <param name="dadaR" ftype="dada2_dada" value="dada_F3D0_S188_L001_R2.Rdata"/>
             <param name="derepR" ftype="fastq.gz" value="filterAndTrim_F3D0_R2.fq.gz"/>
-            <output name="merged" value="mergePairs_F3D0.Rdata" ftype="dada2_mergepairs" compare="sim_size" delta="400" />
+            <output name="merged" value="mergePairs_F3D0_S188_L001.Rdata" ftype="dada2_mergepairs" compare="sim_size" delta="400" />
         </test>
         <!-- test non-default options -->
         <test>
-            <param name="dadaF" ftype="dada2_dada" value="dada_F3D0_R1.Rdata"/>
+            <param name="dadaF" ftype="dada2_dada" value="dada_F3D0_S188_L001_R1.Rdata"/>
             <param name="derepF" ftype="fastq.gz" value="filterAndTrim_F3D0_R1.fq.gz"/>
-            <param name="dadaR" ftype="dada2_dada" value="dada_F3D0_R2.Rdata"/>
+            <param name="dadaR" ftype="dada2_dada" value="dada_F3D0_S188_L001_R2.Rdata"/>
             <param name="derepR" ftype="fastq.gz" value="filterAndTrim_F3D0_R2.fq.gz"/>
-            <output name="merged" value="mergePairs_F3D0_nondefault.Rdata" ftype="dada2_mergepairs" compare="sim_size" delta="700"/>
+            <output name="merged" value="mergePairs_F3D0_S188_L001_nondefault.Rdata" ftype="dada2_mergepairs" compare="sim_size" delta="700"/>
             <param name="minOverlap" value="8" />
             <param name="maxMismatch" value="1"/>
             <param name="justConcatenate" value="TRUE" />