Mercurial > repos > iuc > data_manager_build_bracken_database

changeset 5:5c8a23ccb14a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_bracken_database/ commit db62b99fe2c0e77e7ee63da5fb315f4b6d95170b
author iuc
date Mon, 22 May 2023 19:24:35 +0000
parents c8136920948b
children 84cc0dc92b0c
files data_manager/bracken_build_database.xml
diffstat 1 files changed, 8 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/bracken_build_database.xml	Sun Apr 16 08:29:39 2023 +0000
+++ b/data_manager/bracken_build_database.xml	Mon May 22 19:24:35 2023 +0000
@@ -1,9 +1,13 @@
 <?xml version="1.0"?>
-<tool id="bracken_build_database" name="Bracken Database Builder" tool_type="manage_data" version="2.5+galaxy1" profile="19.01">
+<tool id="bracken_build_database" name="Bracken Database Builder" tool_type="manage_data" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <description>bracken database builder</description>
+    <macros>
+        <token name="@TOOL_VERSION@">2.8</token>
+        <token name="@VERSION_SUFFIX@">0</token>
+        <token name="@PROFILE@">22.01</token>
+    </macros>
     <requirements>
-        <requirement type="package" version="2.5">bracken</requirement>
-        <requirement type="package" version="2.1.1">kraken2</requirement>
+        <requirement type="package" version="@TOOL_VERSION@">bracken</requirement>
     </requirements>
     <command>
     <![CDATA[
@@ -47,7 +51,7 @@
                 <param name="read_len" type="select" label="Read length" >
                     <option value="50">50</option>
                     <option value="75">75</option>
-                    <option value="100">100</option>
+                    <option value="100" selected="true">100</option>
                     <option value="150">150</option>
                     <option value="200">200</option>
                     <option value="250">250</option>