Mercurial > repos > iuc > data_manager_build_kraken2_database

changeset 8:e4b4837f06f5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 09b56ef3e09ad6c5923c88616fea5cbd77d87616
author iuc
date Mon, 18 Dec 2023 09:36:03 +0000
parents ed1518ce2237
children 539b008cfe1c
files data_manager/kraken2_build_database.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/kraken2_build_database.xml	Sun Apr 16 08:29:45 2023 +0000
+++ b/data_manager/kraken2_build_database.xml	Mon Dec 18 09:36:03 2023 +0000
@@ -1,8 +1,9 @@
 <?xml version="1.0"?>
 <tool id="kraken2_build_database" name="Kraken2" tool_type="manage_data" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
+    <description>database builder</description>
     <macros>
         <token name="@TOOL_VERSION@">2.1.2</token>
-        <token name="@VERSION_SUFFIX@">0</token>
+        <token name="@VERSION_SUFFIX@">1</token>
         <token name="@PROFILE@">21.01</token>
         <xml name="common_params">
             <param name="kmer_len" type="integer" value="35" label="K-mer length in BP" />
@@ -45,7 +46,6 @@
             <option value="pluspfp_16gb">PlusPFP-16 (PlusPFP with DB capped at 16 GB; ~15 GB)</option>
         </xml>
     </macros>
-    <description>database builder</description>
     <requirements>
         <requirement type="package" version="@TOOL_VERSION@">kraken2</requirement>
         <requirement type="package" version="3.7">python</requirement>
@@ -206,7 +206,7 @@
                 <param name="kmer_len" value="35" />
                 <param name="minimizer_spaces" value="6"/>
                 <param name="load_factor" value="0.7" />
-                <param name="clean" truevalue="--clean"/>
+                <param name="clean" value="true"/>
             </conditional>
             <output name="out_file">
                 <assert_contents>