Mercurial > repos > iuc > data_manager_metaphlan_database_downloader
annotate data_manager_conf.xml @ 2:5fe20c915fa6 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 57df6e8a0ffd145e560f7c7e20cfedbbe2ce01d2
| author | iuc |
|---|---|
| date | Tue, 28 Mar 2023 18:54:12 +0000 |
| parents | 169b08c9713c |
| children |
| rev | line source |
|---|---|
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
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1 <?xml version="1.0"?> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
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2 <data_managers> |
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2
5fe20c915fa6
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 57df6e8a0ffd145e560f7c7e20cfedbbe2ce01d2
iuc
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3 <data_manager tool_file="data_manager/data_manager_metaphlan_download.xml" id="data_manager_metaphlan_download"> |
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5fe20c915fa6
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 57df6e8a0ffd145e560f7c7e20cfedbbe2ce01d2
iuc
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4 <data_table name="metaphlan_database_versioned"> <!-- Defines a Data Table to be modified. --> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
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5 <output> <!-- Handle the output of the Data Manager Tool --> |
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5fe20c915fa6
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 57df6e8a0ffd145e560f7c7e20cfedbbe2ce01d2
iuc
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changeset
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6 <column name="value"/> <!-- columns that are going to be specified by the Data Manager Tool --> |
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5fe20c915fa6
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 57df6e8a0ffd145e560f7c7e20cfedbbe2ce01d2
iuc
parents:
0
diff
changeset
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7 <column name="name"/> <!-- columns that are going to be specified by the Data Manager Tool --> |
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5fe20c915fa6
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 57df6e8a0ffd145e560f7c7e20cfedbbe2ce01d2
iuc
parents:
0
diff
changeset
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8 <column name="dbkey"/> <!-- columns that are going to be specified by the Data Manager Tool --> |
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5fe20c915fa6
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 57df6e8a0ffd145e560f7c7e20cfedbbe2ce01d2
iuc
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9 <column name="path" output_ref="out_file"> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
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10 <move type="directory"> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
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11 <source>${path}</source> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
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12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">metaphlan/data/${dbkey}</target> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
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13 </move> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
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14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/metaphlan/data/${dbkey}</value_translation> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
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15 <value_translation type="function">abspath</value_translation> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
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16 </column> |
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2
5fe20c915fa6
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 57df6e8a0ffd145e560f7c7e20cfedbbe2ce01d2
iuc
parents:
0
diff
changeset
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17 <column name="db_version"/> <!-- columns that are going to be specified by the Data Manager Tool --> |
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0
169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
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18 </output> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
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19 </data_table> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
|
20 </data_manager> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
changeset
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21 </data_managers> |
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169b08c9713c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 1e543a44ceffd8e4c5537b9015606ab3b90a114c"
iuc
parents:
diff
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22 |