Mercurial > repos > iuc > data_manager_pangolin_data

comparison data_manager_conf.xml @ 0:33158d21324d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_pangolin_data commit 902cce06e30ffe8ccba5dc0c3b704eb39fb4c611
author iuc
date Wed, 20 Jul 2022 21:02:43 +0000
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-1:000000000000 0:33158d21324d
1 <?xml version="1.0"?>
2 <data_managers>
3 <data_manager tool_file="data_manager/pangolin_data_dm.xml" id="data_manager_pangolin_data">
4 <data_table name="pangolin_data">
5 <output>
6 <column name="value" />
7 <column name="description" />
8 <column name="min_pangolin_version" />
9 <column name="date" />
10 <column name="path" output_ref="output_file" >
11 <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') -->
12 <move type="directory" relativize_symlinks="True">
13 <source>${path}</source>
14 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_data/#echo str($value)#</target>
15 </move>
16 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_data/#echo str($value)#</value_translation>
17 <value_translation type="function">abspath</value_translation>
18 </column>
19 </output>
20 </data_table>
21 <data_table name="pangolin_constellations">
22 <output>
23 <column name="value" />
24 <column name="description" />
25 <column name="min_scorpio_version" />
26 <column name="date" />
27 <column name="path" output_ref="output_file" >
28 <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') -->
29 <move type="directory" relativize_symlinks="True">
30 <source>${path}</source>
31 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_constellations/#echo str($value)#</target>
32 </move>
33 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_constellations/#echo str($value)#</value_translation>
34 <value_translation type="function">abspath</value_translation>
35 </column>
36 </output>
37 </data_table>
38 <data_table name="pangolin_assignment">
39 <output>
40 <column name="value" />
41 <column name="description" />
42 <column name="min_pangolin_version" />
43 <column name="date" />
44 <column name="path" output_ref="output_file" >
45 <!-- note: the Python script sanitises the possibly user-supplied scheme name ('value') -->
46 <move type="directory" relativize_symlinks="True">
47 <source>${path}</source>
48 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">pangolin_assignment/#echo str($value)#</target>
49 </move>
50 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/pangolin_assignment/#echo str($value)#</value_translation>
51 <value_translation type="function">abspath</value_translation>
52 </column>
53 </output>
54 </data_table>
55 </data_manager>
56 </data_managers>