annotate macros.xml @ 4:f198773344e4 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 384736acb5d2ae31d796c53031fad0e5da5424e3
author iuc
date Fri, 01 Jul 2022 16:18:35 +0000
parents 17e3b698dd52
children b8a457820315
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
1 <macros>
3
17e3b698dd52 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 2
diff changeset
2 <token name="@TOOL_VERSION@">1.1.0</token>
4
f198773344e4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 384736acb5d2ae31d796c53031fad0e5da5424e3
iuc
parents: 3
diff changeset
3 <token name="@VERSION_SUFFIX@">2</token>
3
17e3b698dd52 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 2
diff changeset
4 <token name="@PROFILE@">21.01</token>
0
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
5 <xml name="inputs_outputs">
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
6 <inputs>
3
17e3b698dd52 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 2
diff changeset
7 <param name="in_file" type="data" format="tabular,csv,tsv" label="Input tabular dataset" help="" />
0
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
8 <yield />
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
9 </inputs>
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
10 <outputs>
3
17e3b698dd52 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 2
diff changeset
11 <data name="out_file" format_source="in_file" label="${tool.name} on ${on_string}" />
0
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
12 </outputs>
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
13 </xml>
3
17e3b698dd52 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 2
diff changeset
14 <token name="@FIELD_SEPARATOR@"><![CDATA[
17e3b698dd52 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 2
diff changeset
15 #if $in_file.ext == 'csv'
17e3b698dd52 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 2
diff changeset
16 -t ,
17e3b698dd52 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 2
diff changeset
17 #end if
17e3b698dd52 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 2
diff changeset
18 ]]></token>
0
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
19 <xml name="requirements">
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
20 <requirements>
3
17e3b698dd52 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 2
diff changeset
21 <requirement type="package" version="@TOOL_VERSION@">datamash</requirement>
0
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
22 </requirements>
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
23 </xml>
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
24 <xml name="stdio">
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
25 <stdio>
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
26 <exit_code description="Error" level="fatal" range="1:" />
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
27 </stdio>
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
28 </xml>
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
29 <token name="@HELP_FOOTER@">
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
30 -----
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
31
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
32 **GNU Datamash** is a Free and Open Source Software, see more details on the Datamash_ Website.
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
33
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
34 **GNU Datamash** is also available as a command-line program, see http://www.gnu.org/software/datamash/download/ .
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
35
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
36 For more details about supported statistical operations, see Datamash_ website.
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
37
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
38 .. _Datamash: http://www.gnu.org/software/datamash/
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
39 </token>
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
40 <token name="@HELP_HEADER@">
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
41 .. class:: infomark
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
42
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
43 **TIP:** Input data must be TAB delimited. If the desired dataset does not appear in the input list, use *Text Manipulation->Convert* to convert it to **Tabular** type.
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
44
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
45 -----
24b9a80cac40 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
iuc
parents:
diff changeset
46 </token>
1
3234b2813413 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 5a6df0b54ca66fb588886b4610bbd837cd624fed
iuc
parents: 0
diff changeset
47 </macros>