view test-data/flattened.gtf @ 2:6e8b61c54ff3 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dexseq commit 0a56599c36b4968095ec5a3cb589f94fb139466c
author iuc
date Sun, 28 Jan 2018 04:04:39 -0500
parents 4ca0e679f21e
children 251393b72616
line wrap: on
line source

4	dexseq_prepare_annotation.py	aggregate_gene	68336	77667	.	-	.	gene_id "FBgn0004859"
4	dexseq_prepare_annotation.py	exonic_part	68336	71088	.	-	.	transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "001"
4	dexseq_prepare_annotation.py	exonic_part	71142	71239	.	-	.	transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "002"
4	dexseq_prepare_annotation.py	exonic_part	71240	71306	.	-	.	transcripts "FBtr0306168+FBtr0089178"; gene_id "FBgn0004859"; exonic_part_number "003"
4	dexseq_prepare_annotation.py	exonic_part	71371	71883	.	-	.	transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "004"
4	dexseq_prepare_annotation.py	exonic_part	71940	72580	.	-	.	transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "005"
4	dexseq_prepare_annotation.py	exonic_part	72643	73010	.	-	.	transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "006"
4	dexseq_prepare_annotation.py	exonic_part	76457	76916	.	-	.	transcripts "FBtr0308074+FBtr0089178"; gene_id "FBgn0004859"; exonic_part_number "007"
4	dexseq_prepare_annotation.py	exonic_part	76917	76957	.	-	.	transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "008"
4	dexseq_prepare_annotation.py	exonic_part	76958	77667	.	-	.	transcripts "FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "009"
4	dexseq_prepare_annotation.py	aggregate_gene	137015	150380	.	-	.	gene_id "FBgn0011747"
4	dexseq_prepare_annotation.py	exonic_part	137015	137256	.	-	.	transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "001"
4	dexseq_prepare_annotation.py	exonic_part	137312	139127	.	-	.	transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "002"
4	dexseq_prepare_annotation.py	exonic_part	139181	139405	.	-	.	transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "003"
4	dexseq_prepare_annotation.py	exonic_part	139464	139557	.	-	.	transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "004"
4	dexseq_prepare_annotation.py	exonic_part	140514	140838	.	-	.	transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "005"
4	dexseq_prepare_annotation.py	exonic_part	141484	142425	.	-	.	transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "006"
4	dexseq_prepare_annotation.py	exonic_part	142479	142582	.	-	.	transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "007"
4	dexseq_prepare_annotation.py	exonic_part	142935	144048	.	-	.	transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "008"
4	dexseq_prepare_annotation.py	exonic_part	144411	144518	.	-	.	transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "009"
4	dexseq_prepare_annotation.py	exonic_part	149948	150068	.	-	.	transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "010"
4	dexseq_prepare_annotation.py	exonic_part	150069	150078	.	-	.	transcripts "FBtr0089173"; gene_id "FBgn0011747"; exonic_part_number "011"
4	dexseq_prepare_annotation.py	exonic_part	150181	150353	.	-	.	transcripts "FBtr0089172"; gene_id "FBgn0011747"; exonic_part_number "012"
4	dexseq_prepare_annotation.py	exonic_part	150354	150380	.	-	.	transcripts "FBtr0089172+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "013"
4	dexseq_prepare_annotation.py	aggregate_gene	522436	560418	.	+	.	gene_id "FBgn0004607"
4	dexseq_prepare_annotation.py	exonic_part	522436	522483	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "001"
4	dexseq_prepare_annotation.py	exonic_part	524477	524764	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "002"
4	dexseq_prepare_annotation.py	exonic_part	536208	536257	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "003"
4	dexseq_prepare_annotation.py	exonic_part	542099	543730	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "004"
4	dexseq_prepare_annotation.py	exonic_part	544957	545138	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "005"
4	dexseq_prepare_annotation.py	exonic_part	545530	547146	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "006"
4	dexseq_prepare_annotation.py	exonic_part	550319	551719	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "007"
4	dexseq_prepare_annotation.py	exonic_part	551782	551784	.	+	.	transcripts "FBtr0332913+FBtr0089070"; gene_id "FBgn0004607"; exonic_part_number "008"
4	dexseq_prepare_annotation.py	exonic_part	551785	552005	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "009"
4	dexseq_prepare_annotation.py	exonic_part	552062	552409	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "010"
4	dexseq_prepare_annotation.py	exonic_part	553409	553411	.	+	.	transcripts "FBtr0332913+FBtr0089070"; gene_id "FBgn0004607"; exonic_part_number "011"
4	dexseq_prepare_annotation.py	exonic_part	553412	553552	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "012"
4	dexseq_prepare_annotation.py	exonic_part	553609	556506	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "013"
4	dexseq_prepare_annotation.py	exonic_part	557592	557701	.	+	.	transcripts "FBtr0332913"; gene_id "FBgn0004607"; exonic_part_number "014"
4	dexseq_prepare_annotation.py	exonic_part	557801	558386	.	+	.	transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "015"
4	dexseq_prepare_annotation.py	exonic_part	558387	558999	.	+	.	transcripts "FBtr0332913"; gene_id "FBgn0004607"; exonic_part_number "016"
4	dexseq_prepare_annotation.py	exonic_part	559164	559230	.	+	.	transcripts "FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "017"
4	dexseq_prepare_annotation.py	exonic_part	559285	560418	.	+	.	transcripts "FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "018"
4	dexseq_prepare_annotation.py	aggregate_gene	718315	741787	.	+	.	gene_id "FBgn0005558"
4	dexseq_prepare_annotation.py	exonic_part	718315	718509	.	+	.	transcripts "FBtr0089235"; gene_id "FBgn0005558"; exonic_part_number "001"
4	dexseq_prepare_annotation.py	exonic_part	725703	725899	.	+	.	transcripts "FBtr0089236+FBtr0100396"; gene_id "FBgn0005558"; exonic_part_number "002"
4	dexseq_prepare_annotation.py	exonic_part	728055	728117	.	+	.	transcripts "FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "003"
4	dexseq_prepare_annotation.py	exonic_part	728118	728297	.	+	.	transcripts "FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "004"
4	dexseq_prepare_annotation.py	exonic_part	731543	731708	.	+	.	transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "005"
4	dexseq_prepare_annotation.py	exonic_part	733119	733299	.	+	.	transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "006"
4	dexseq_prepare_annotation.py	exonic_part	734484	735138	.	+	.	transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "007"
4	dexseq_prepare_annotation.py	exonic_part	737753	737926	.	+	.	transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "008"
4	dexseq_prepare_annotation.py	exonic_part	738280	738555	.	+	.	transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "009"
4	dexseq_prepare_annotation.py	exonic_part	739900	740254	.	+	.	transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "010"
4	dexseq_prepare_annotation.py	exonic_part	740948	741787	.	+	.	transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "011"
4	dexseq_prepare_annotation.py	aggregate_gene	745030	796707	.	+	.	gene_id "FBgn0005666"
4	dexseq_prepare_annotation.py	exonic_part	745030	745117	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "001"
4	dexseq_prepare_annotation.py	exonic_part	746295	746655	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "002"
4	dexseq_prepare_annotation.py	exonic_part	747288	747309	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "003"
4	dexseq_prepare_annotation.py	exonic_part	747558	747588	.	+	.	transcripts "FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "004"
4	dexseq_prepare_annotation.py	exonic_part	748087	748249	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "005"
4	dexseq_prepare_annotation.py	exonic_part	748730	748871	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "006"
4	dexseq_prepare_annotation.py	exonic_part	749299	749440	.	+	.	transcripts "FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "007"
4	dexseq_prepare_annotation.py	exonic_part	749628	749828	.	+	.	transcripts "FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "008"
4	dexseq_prepare_annotation.py	exonic_part	749900	750201	.	+	.	transcripts "FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "009"
4	dexseq_prepare_annotation.py	exonic_part	751403	751626	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "010"
4	dexseq_prepare_annotation.py	exonic_part	751689	752091	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "011"
4	dexseq_prepare_annotation.py	exonic_part	752186	752859	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "012"
4	dexseq_prepare_annotation.py	exonic_part	753843	754190	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "013"
4	dexseq_prepare_annotation.py	exonic_part	754546	754590	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "014"
4	dexseq_prepare_annotation.py	exonic_part	754905	755027	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "015"
4	dexseq_prepare_annotation.py	exonic_part	755104	755163	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "016"
4	dexseq_prepare_annotation.py	exonic_part	755340	755438	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "017"
4	dexseq_prepare_annotation.py	exonic_part	756141	756449	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "018"
4	dexseq_prepare_annotation.py	exonic_part	756531	756656	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "019"
4	dexseq_prepare_annotation.py	exonic_part	756775	756813	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "020"
4	dexseq_prepare_annotation.py	exonic_part	756965	757141	.	+	.	transcripts "FBtr0301340"; gene_id "FBgn0005666"; exonic_part_number "021"
4	dexseq_prepare_annotation.py	exonic_part	757445	757672	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "022"
4	dexseq_prepare_annotation.py	exonic_part	758362	758535	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "023"
4	dexseq_prepare_annotation.py	exonic_part	759579	759614	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "024"
4	dexseq_prepare_annotation.py	exonic_part	760575	760607	.	+	.	transcripts "FBtr0301340"; gene_id "FBgn0005666"; exonic_part_number "025"
4	dexseq_prepare_annotation.py	exonic_part	763029	763176	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "026"
4	dexseq_prepare_annotation.py	exonic_part	763414	763787	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "027"
4	dexseq_prepare_annotation.py	exonic_part	765792	765917	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "028"
4	dexseq_prepare_annotation.py	exonic_part	765998	766697	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "029"
4	dexseq_prepare_annotation.py	exonic_part	767102	767455	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "030"
4	dexseq_prepare_annotation.py	exonic_part	767933	769645	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "031"
4	dexseq_prepare_annotation.py	exonic_part	771196	772095	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "032"
4	dexseq_prepare_annotation.py	exonic_part	772803	773566	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "033"
4	dexseq_prepare_annotation.py	exonic_part	773651	773786	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "034"
4	dexseq_prepare_annotation.py	exonic_part	773964	774854	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "035"
4	dexseq_prepare_annotation.py	exonic_part	774913	777585	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "036"
4	dexseq_prepare_annotation.py	exonic_part	778147	778428	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "037"
4	dexseq_prepare_annotation.py	exonic_part	778491	778790	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "038"
4	dexseq_prepare_annotation.py	exonic_part	778846	788316	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "039"
4	dexseq_prepare_annotation.py	exonic_part	788388	789366	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "040"
4	dexseq_prepare_annotation.py	exonic_part	789430	789771	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "041"
4	dexseq_prepare_annotation.py	exonic_part	791179	792221	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "042"
4	dexseq_prepare_annotation.py	exonic_part	793029	793085	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "043"
4	dexseq_prepare_annotation.py	exonic_part	794643	794743	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "044"
4	dexseq_prepare_annotation.py	exonic_part	794811	794937	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "045"
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4	dexseq_prepare_annotation.py	exonic_part	795541	796707	.	+	.	transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "047"
4	dexseq_prepare_annotation.py	aggregate_gene	1052110	1055183	.	+	.	gene_id "FBgn0010217"
4	dexseq_prepare_annotation.py	exonic_part	1052110	1052368	.	+	.	transcripts "FBtr0333672"; gene_id "FBgn0010217"; exonic_part_number "001"
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4	dexseq_prepare_annotation.py	exonic_part	1052490	1052579	.	+	.	transcripts "FBtr0089187+FBtr0333672+FBtr0089186"; gene_id "FBgn0010217"; exonic_part_number "003"
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4	dexseq_prepare_annotation.py	aggregate_gene	1077991	1084936	.	-	.	gene_id "FBgn0011642"
4	dexseq_prepare_annotation.py	exonic_part	1077991	1078198	.	-	.	transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "001"
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4	dexseq_prepare_annotation.py	exonic_part	1078666	1078777	.	-	.	transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "005"
4	dexseq_prepare_annotation.py	exonic_part	1078778	1078781	.	-	.	transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0089214+FBtr0089216+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "006"
4	dexseq_prepare_annotation.py	exonic_part	1078836	1079130	.	-	.	transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "007"
4	dexseq_prepare_annotation.py	exonic_part	1079727	1079914	.	-	.	transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "008"
4	dexseq_prepare_annotation.py	exonic_part	1079915	1079958	.	-	.	transcripts "FBtr0309885+FBtr0309882+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0089211+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "009"
4	dexseq_prepare_annotation.py	exonic_part	1079959	1079977	.	-	.	transcripts "FBtr0309885+FBtr0309882+FBtr0089214+FBtr0089216+FBtr0089211+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "010"
4	dexseq_prepare_annotation.py	exonic_part	1080045	1080462	.	-	.	transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "011"
4	dexseq_prepare_annotation.py	exonic_part	1081039	1081260	.	-	.	transcripts "FBtr0309885+FBtr0089213+FBtr0089210+FBtr0309884+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "012"
4	dexseq_prepare_annotation.py	exonic_part	1081261	1081279	.	-	.	transcripts "FBtr0089216+FBtr0309885+FBtr0089211+FBtr0089212+FBtr0089215"; gene_id "FBgn0011642"; exonic_part_number "013"
4	dexseq_prepare_annotation.py	exonic_part	1081280	1081285	.	-	.	transcripts "FBtr0089212+FBtr0089215"; gene_id "FBgn0011642"; exonic_part_number "014"
4	dexseq_prepare_annotation.py	exonic_part	1081365	1081366	.	-	.	transcripts "FBtr0089215+FBtr0089216+FBtr0089213"; gene_id "FBgn0011642"; exonic_part_number "015"
4	dexseq_prepare_annotation.py	exonic_part	1081367	1081398	.	-	.	transcripts "FBtr0309885+FBtr0089213+FBtr0089210+FBtr0309884+FBtr0089216+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "016"
4	dexseq_prepare_annotation.py	exonic_part	1081399	1081512	.	-	.	transcripts "FBtr0309885+FBtr0089213+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "017"
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4	dexseq_prepare_annotation.py	exonic_part	1084871	1084936	.	-	.	transcripts "FBtr0309882"; gene_id "FBgn0011642"; exonic_part_number "019"
4	dexseq_prepare_annotation.py	aggregate_gene	1109444	1133943	.	+	.	gene_id "FBgn0005561"
4	dexseq_prepare_annotation.py	exonic_part	1109444	1109688	.	+	.	transcripts "FBtr0089327+FBtr0089328+FBtr0100343+FBtr0100342"; gene_id "FBgn0005561"; exonic_part_number "001"
4	dexseq_prepare_annotation.py	exonic_part	1112885	1113254	.	+	.	transcripts "FBtr0089327+FBtr0089328+FBtr0100343+FBtr0100342"; gene_id "FBgn0005561"; exonic_part_number "002"
4	dexseq_prepare_annotation.py	exonic_part	1116202	1116342	.	+	.	transcripts "FBtr0089327+FBtr0089328+FBtr0100343+FBtr0100342"; gene_id "FBgn0005561"; exonic_part_number "003"
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XHet	dexseq_prepare_annotation.py	aggregate_gene	69195	80249	.	+	.	gene_id "FBgn0003559"
XHet	dexseq_prepare_annotation.py	exonic_part	69195	69305	.	+	.	transcripts "FBtr0113732"; gene_id "FBgn0003559"; exonic_part_number "001"
XHet	dexseq_prepare_annotation.py	exonic_part	75615	75685	.	+	.	transcripts "FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "002"
XHet	dexseq_prepare_annotation.py	exonic_part	75686	75693	.	+	.	transcripts "FBtr0306545+FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "003"
XHet	dexseq_prepare_annotation.py	exonic_part	75694	75740	.	+	.	transcripts "FBtr0306545"; gene_id "FBgn0003559"; exonic_part_number "004"
XHet	dexseq_prepare_annotation.py	exonic_part	76177	76237	.	+	.	transcripts "FBtr0309956+FBtr0113733"; gene_id "FBgn0003559"; exonic_part_number "005"
XHet	dexseq_prepare_annotation.py	exonic_part	76238	76549	.	+	.	transcripts "FBtr0113732+FBtr0309956+FBtr0306545+FBtr0113733+FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "006"
XHet	dexseq_prepare_annotation.py	exonic_part	76611	76933	.	+	.	transcripts "FBtr0113732+FBtr0309956+FBtr0306545+FBtr0113733+FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "007"
XHet	dexseq_prepare_annotation.py	exonic_part	77098	77373	.	+	.	transcripts "FBtr0113732+FBtr0309956+FBtr0306545+FBtr0113733+FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "008"
XHet	dexseq_prepare_annotation.py	exonic_part	77432	77735	.	+	.	transcripts "FBtr0113732+FBtr0309956+FBtr0306545+FBtr0113733+FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "009"
XHet	dexseq_prepare_annotation.py	exonic_part	77736	77831	.	+	.	transcripts "FBtr0113732+FBtr0309956+FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "010"
XHet	dexseq_prepare_annotation.py	exonic_part	77832	77847	.	+	.	transcripts "FBtr0309956"; gene_id "FBgn0003559"; exonic_part_number "011"
XHet	dexseq_prepare_annotation.py	exonic_part	78036	78227	.	+	.	transcripts "FBtr0113732+FBtr0306545+FBtr0113733+FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "012"
XHet	dexseq_prepare_annotation.py	exonic_part	78293	78706	.	+	.	transcripts "FBtr0113732+FBtr0306545+FBtr0113733+FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "013"
XHet	dexseq_prepare_annotation.py	exonic_part	78763	78870	.	+	.	transcripts "FBtr0113732+FBtr0306545+FBtr0113733+FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "014"
XHet	dexseq_prepare_annotation.py	exonic_part	79320	79620	.	+	.	transcripts "FBtr0113732+FBtr0306545+FBtr0113733+FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "015"
XHet	dexseq_prepare_annotation.py	exonic_part	79678	80010	.	+	.	transcripts "FBtr0113732+FBtr0306545+FBtr0113733+FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "016"
XHet	dexseq_prepare_annotation.py	exonic_part	80011	80249	.	+	.	transcripts "FBtr0306544"; gene_id "FBgn0003559"; exonic_part_number "017"
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YHet	dexseq_prepare_annotation.py	exonic_part	540	799	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "002"
YHet	dexseq_prepare_annotation.py	exonic_part	857	1196	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "003"
YHet	dexseq_prepare_annotation.py	exonic_part	1254	1519	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "004"
YHet	dexseq_prepare_annotation.py	exonic_part	1576	1729	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "005"
YHet	dexseq_prepare_annotation.py	exonic_part	1816	2154	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "006"
YHet	dexseq_prepare_annotation.py	exonic_part	2212	2324	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "007"
YHet	dexseq_prepare_annotation.py	exonic_part	2376	2667	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "008"
YHet	dexseq_prepare_annotation.py	exonic_part	2726	2879	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "009"
YHet	dexseq_prepare_annotation.py	exonic_part	15564	15931	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "010"
YHet	dexseq_prepare_annotation.py	exonic_part	16461	16907	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "011"
YHet	dexseq_prepare_annotation.py	exonic_part	16954	19761	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "012"
YHet	dexseq_prepare_annotation.py	exonic_part	30303	30469	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "013"
YHet	dexseq_prepare_annotation.py	exonic_part	30522	31622	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "014"
YHet	dexseq_prepare_annotation.py	exonic_part	33215	33413	.	+	.	transcripts "FBtr0113891"; gene_id "FBgn0001315"; exonic_part_number "015"
YHet	dexseq_prepare_annotation.py	aggregate_gene	34290	65839	.	+	.	gene_id "FBgn0001314"
YHet	dexseq_prepare_annotation.py	exonic_part	34290	35635	.	+	.	transcripts "FBtr0113756"; gene_id "FBgn0001314"; exonic_part_number "001"
YHet	dexseq_prepare_annotation.py	exonic_part	35699	37083	.	+	.	transcripts "FBtr0113756"; gene_id "FBgn0001314"; exonic_part_number "002"
YHet	dexseq_prepare_annotation.py	exonic_part	39036	39370	.	+	.	transcripts "FBtr0113756"; gene_id "FBgn0001314"; exonic_part_number "003"
YHet	dexseq_prepare_annotation.py	exonic_part	52186	52593	.	+	.	transcripts "FBtr0113756"; gene_id "FBgn0001314"; exonic_part_number "004"
YHet	dexseq_prepare_annotation.py	exonic_part	52629	52993	.	+	.	transcripts "FBtr0113756"; gene_id "FBgn0001314"; exonic_part_number "005"
YHet	dexseq_prepare_annotation.py	exonic_part	53268	54728	.	+	.	transcripts "FBtr0113756"; gene_id "FBgn0001314"; exonic_part_number "006"
YHet	dexseq_prepare_annotation.py	exonic_part	62657	63619	.	+	.	transcripts "FBtr0113756"; gene_id "FBgn0001314"; exonic_part_number "007"
YHet	dexseq_prepare_annotation.py	exonic_part	63770	65605	.	+	.	transcripts "FBtr0113756"; gene_id "FBgn0001314"; exonic_part_number "008"
YHet	dexseq_prepare_annotation.py	exonic_part	65661	65839	.	+	.	transcripts "FBtr0113756"; gene_id "FBgn0001314"; exonic_part_number "009"
YHet	dexseq_prepare_annotation.py	aggregate_gene	81209	148249	.	+	.	gene_id "FBgn0001313"
YHet	dexseq_prepare_annotation.py	exonic_part	81209	83052	.	+	.	transcripts "FBtr0300022"; gene_id "FBgn0001313"; exonic_part_number "001"
YHet	dexseq_prepare_annotation.py	exonic_part	122064	122745	.	+	.	transcripts "FBtr0300022"; gene_id "FBgn0001313"; exonic_part_number "002"
YHet	dexseq_prepare_annotation.py	exonic_part	122800	123184	.	+	.	transcripts "FBtr0300022"; gene_id "FBgn0001313"; exonic_part_number "003"
YHet	dexseq_prepare_annotation.py	exonic_part	135429	135872	.	+	.	transcripts "FBtr0300022"; gene_id "FBgn0001313"; exonic_part_number "004"
YHet	dexseq_prepare_annotation.py	exonic_part	138620	139940	.	+	.	transcripts "FBtr0300022"; gene_id "FBgn0001313"; exonic_part_number "005"
YHet	dexseq_prepare_annotation.py	exonic_part	140189	141784	.	+	.	transcripts "FBtr0300022"; gene_id "FBgn0001313"; exonic_part_number "006"
YHet	dexseq_prepare_annotation.py	exonic_part	141841	145922	.	+	.	transcripts "FBtr0300022"; gene_id "FBgn0001313"; exonic_part_number "007"
YHet	dexseq_prepare_annotation.py	exonic_part	145985	146089	.	+	.	transcripts "FBtr0300022"; gene_id "FBgn0001313"; exonic_part_number "008"
YHet	dexseq_prepare_annotation.py	exonic_part	146143	147085	.	+	.	transcripts "FBtr0300022"; gene_id "FBgn0001313"; exonic_part_number "009"
YHet	dexseq_prepare_annotation.py	exonic_part	147145	147638	.	+	.	transcripts "FBtr0300022"; gene_id "FBgn0001313"; exonic_part_number "010"
YHet	dexseq_prepare_annotation.py	exonic_part	147696	148249	.	+	.	transcripts "FBtr0300022"; gene_id "FBgn0001313"; exonic_part_number "011"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	1	65	.	+	.	gene_id "FBgn0013696"
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dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	171	239	.	+	.	gene_id "FBgn0013700"
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dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	1403	1468	.	-	.	gene_id "FBgn0013710"
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dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	1474	3009	.	+	.	gene_id "FBgn0013674"
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dmel_mitochondrion_genome	dexseq_prepare_annotation.py	exonic_part	6337	6401	.	-	.	transcripts "FBtr0100876"; gene_id "FBgn0013693"; exonic_part_number "001"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	6402	8124	.	-	.	gene_id "FBgn0013684"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	exonic_part	6402	8124	.	-	.	transcripts "FBtr0100877"; gene_id "FBgn0013684"; exonic_part_number "001"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	8140	8205	.	-	.	gene_id "FBgn0013695"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	exonic_part	8140	8205	.	-	.	transcripts "FBtr0100878"; gene_id "FBgn0013695"; exonic_part_number "001"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	9837	9902	.	+	.	gene_id "FBgn0013707"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	exonic_part	9837	9902	.	+	.	transcripts "FBtr0100881"; gene_id "FBgn0013707"; exonic_part_number "001"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	9903	9963	.	-	.	gene_id "FBgn0013702"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	exonic_part	9903	9963	.	-	.	transcripts "FBtr0100882"; gene_id "FBgn0013702"; exonic_part_number "001"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	9970	10494	.	+	.	gene_id "FBgn0013685"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	exonic_part	9970	10494	.	+	.	transcripts "FBtr0100883"; gene_id "FBgn0013685"; exonic_part_number "001"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	10498	11634	.	+	.	gene_id "FBgn0013678"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	exonic_part	10498	11634	.	+	.	transcripts "FBtr0100884"; gene_id "FBgn0013678"; exonic_part_number "001"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	11637	11702	.	+	.	gene_id "FBgn0013706"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	exonic_part	11637	11702	.	+	.	transcripts "FBtr0100885"; gene_id "FBgn0013706"; exonic_part_number "001"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	11720	12658	.	-	.	gene_id "FBgn0013679"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	exonic_part	11720	12658	.	-	.	transcripts "FBtr0100886"; gene_id "FBgn0013679"; exonic_part_number "001"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	12669	12733	.	-	.	gene_id "FBgn0013698"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	exonic_part	12669	12733	.	-	.	transcripts "FBtr0100887"; gene_id "FBgn0013698"; exonic_part_number "001"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	aggregate_gene	14131	14916	.	-	.	gene_id "FBgn0013688"
dmel_mitochondrion_genome	dexseq_prepare_annotation.py	exonic_part	14131	14916	.	-	.	transcripts "FBtr0100890"; gene_id "FBgn0013688"; exonic_part_number "001"