Mercurial > repos > iuc > feelnc

changeset 2:75427ceb32d1 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/feelnc commit c39323361ef6ba2664646e4476736c80bcd01124"
author iuc
date Wed, 18 Dec 2019 15:24:23 -0500
parents 17a77824c8e4
children 095162ba8e90
files feelnc_wrapper.xml test-data/candidate_lncRNA.classifier.txt test-data/candidate_lncRNA.gtf.lncRNA-sort.gtf test-data/candidate_lncRNA.gtf.mRNA-sort.gtf
diffstat 4 files changed, 1654 insertions(+), 1654 deletions(-) [+]
line wrap: on
line diff
--- a/feelnc_wrapper.xml	Wed Apr 25 15:55:19 2018 -0400
+++ b/feelnc_wrapper.xml	Wed Dec 18 15:24:23 2019 -0500
@@ -5,6 +5,8 @@
         <requirement type="package" version="0.1.1">feelnc</requirement>
     </requirements>
     <command detect_errors="aggressive"><![CDATA[
+export FEELNCPATH=\$(dirname \$(command -v FEELnc_pipeline.sh))/../ &&
+
 FEELnc_pipeline.sh
 --candidate='${transcripts}'
 --reference='${annotation}'
--- a/test-data/candidate_lncRNA.classifier.txt	Wed Apr 25 15:55:19 2018 -0400
+++ b/test-data/candidate_lncRNA.classifier.txt	Wed Dec 18 15:24:23 2019 -0500
@@ -1,406 +1,404 @@
 isBest	lncRNA_gene	lncRNA_transcript	partnerRNA_gene	partnerRNA_transcript	direction	type	distance	subtype	location
-1	XLOC_090599	TCONS_00231415	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	8145	same_strand	downstream
-1	XLOC_090738	TCONS_00232020	ENSCAFG00000013491	ENSCAFT00000021392	sense	intergenic	6860	same_strand	downstream
-1	XLOC_090744	TCONS_00232064	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	28636	same_strand	upstream
-1	XLOC_090744	TCONS_00232060	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	32820	divergent	upstream
-0	XLOC_090744	TCONS_00232060	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	35060	same_strand	upstream
-1	XLOC_090795	TCONS_00232275	ENSCAFG00000012566	ENSCAFT00000019952	antisense	intergenic	24437	convergent	downstream
-0	XLOC_090795	TCONS_00232275	ENSCAFG00000023704	ENSCAFT00000036617	sense	intergenic	26617	same_strand	downstream
+1	XLOC_090606	TCONS_00231453	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
+0	XLOC_090606	TCONS_00231453	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2140	divergent	upstream
+1	XLOC_090700	TCONS_00231870	ENSCAFG00000011125	ENSCAFT00000017715	antisense	genic	0	overlapping	exonic
+1	XLOC_090606	TCONS_00231451	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
+0	XLOC_090606	TCONS_00231451	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
+1	XLOC_090720	TCONS_00231946	ENSCAFG00000026373	ENSCAFT00000040656	sense	intergenic	66670	same_strand	upstream
+1	XLOC_090620	TCONS_00231532	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	intronic
+0	XLOC_090620	TCONS_00231532	ENSCAFG00000009970	ENSCAFT00000015870	antisense	intergenic	517	divergent	upstream
+1	XLOC_090724	TCONS_00231952	ENSCAFG00000013641	ENSCAFT00000021629	antisense	intergenic	3720	divergent	upstream
+1	XLOC_090606	TCONS_00231452	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
+0	XLOC_090606	TCONS_00231452	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
+1	XLOC_090599	TCONS_00231411	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
+1	XLOC_090620	TCONS_00231540	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	intronic
+1	XLOC_091009	TCONS_00233127	ENSCAFG00000013336	ENSCAFT00000021179	antisense	intergenic	6186	convergent	downstream
+1	XLOC_090827	TCONS_00232402	ENSCAFG00000025115	ENSCAFT00000018582	antisense	intergenic	8283	convergent	downstream
+1	XLOC_090943	TCONS_00232878	ENSCAFG00000010624	ENSCAFT00000016924	antisense	intergenic	25650	divergent	upstream
+1	XLOC_091032	TCONS_00233352	ENSCAFG00000013015	ENSCAFT00000020665	antisense	intergenic	13332	divergent	upstream
+1	XLOC_090801	TCONS_00232317	ENSCAFG00000012174	ENSCAFT00000019707	antisense	genic	0	nested	exonic
+1	XLOC_090746	TCONS_00232077	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	6186	same_strand	downstream
+1	XLOC_090827	TCONS_00232401	ENSCAFG00000025115	ENSCAFT00000018582	antisense	intergenic	8283	convergent	downstream
 1	XLOC_090752	TCONS_00232087	ENSCAFG00000013259	ENSCAFT00000021052	antisense	intergenic	3325	divergent	upstream
-1	XLOC_090831	TCONS_00232408	ENSCAFG00000011692	ENSCAFT00000018544	sense	intergenic	12346	same_strand	upstream
-0	XLOC_090831	TCONS_00232408	ENSCAFG00000011706	ENSCAFT00000018594	antisense	intergenic	14517	divergent	upstream
-1	XLOC_090599	TCONS_00231412	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090849	TCONS_00232436	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	6167	divergent	upstream
-0	XLOC_090849	TCONS_00232436	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	7092	divergent	upstream
-1	XLOC_091057	TCONS_00233513	ENSCAFG00000023704	ENSCAFT00000036617	antisense	intergenic	24758	convergent	downstream
-0	XLOC_091057	TCONS_00233513	ENSCAFG00000012566	ENSCAFT00000019952	sense	intergenic	26122	same_strand	downstream
-1	XLOC_090599	TCONS_00231416	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	8242	same_strand	downstream
-1	XLOC_090878	TCONS_00232600	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_090628	TCONS_00231554	ENSCAFG00000025208	ENSCAFT00000039078	antisense	intergenic	1622	divergent	upstream
-0	XLOC_090628	TCONS_00231554	ENSCAFG00000010051	ENSCAFT00000015981	sense	intergenic	4505	same_strand	upstream
-1	XLOC_090726	TCONS_00231956	ENSCAFG00000013637	ENSCAFT00000021622	sense	intergenic	74091	same_strand	upstream
-1	XLOC_090743	TCONS_00232054	ENSCAFG00000013346	ENSCAFT00000021186	antisense	genic	0	overlapping	intronic
-1	XLOC_090727	TCONS_00231958	ENSCAFG00000013637	ENSCAFT00000021622	sense	genic	0	containing	intronic
-1	XLOC_090743	TCONS_00232058	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	377	divergent	upstream
-1	XLOC_090660	TCONS_00231733	ENSCAFG00000010552	ENSCAFT00000016789	antisense	genic	0	overlapping	intronic
-0	XLOC_090660	TCONS_00231733	ENSCAFG00000010573	ENSCAFT00000016817	sense	intergenic	4547	same_strand	upstream
-1	XLOC_090599	TCONS_00231410	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090744	TCONS_00232061	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	28636	same_strand	upstream
-1	XLOC_090599	TCONS_00231402	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_091060	TCONS_00233538	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	369	same_strand	downstream
+1	XLOC_090820	TCONS_00232389	ENSCAFG00000011785	ENSCAFT00000018701	antisense	intergenic	4174	convergent	downstream
+1	XLOC_090606	TCONS_00231454	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
+0	XLOC_090606	TCONS_00231454	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2210	divergent	upstream
 1	XLOC_090894	TCONS_00232667	ENSCAFG00000010137	ENSCAFT00000016099	antisense	intergenic	2168	divergent	upstream
 0	XLOC_090894	TCONS_00232667	ENSCAFG00000010109	ENSCAFT00000016064	antisense	intergenic	3957	convergent	downstream
-1	XLOC_091083	TCONS_00233600	ENSCAFG00000031934	ENSCAFT00000048683	sense	intergenic	4985	same_strand	upstream
-1	XLOC_090801	TCONS_00232316	ENSCAFG00000012174	ENSCAFT00000019707	antisense	genic	0	nested	exonic
-1	XLOC_090970	TCONS_00232964	ENSCAFG00000021604	ENSCAFT00000033711	sense	intergenic	5524	same_strand	upstream
-1	XLOC_091031	TCONS_00233349	ENSCAFG00000013035	ENSCAFT00000020678	sense	intergenic	5141	same_strand	upstream
-0	XLOC_091031	TCONS_00233349	ENSCAFG00000013035	ENSCAFT00000020677	sense	intergenic	5373	same_strand	upstream
-1	XLOC_090634	TCONS_00231594	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2408	divergent	upstream
-1	XLOC_090989	TCONS_00233036	ENSCAFG00000011340	ENSCAFT00000018023	antisense	intergenic	5988	convergent	downstream
-1	XLOC_091060	TCONS_00233539	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	369	same_strand	downstream
-1	XLOC_090674	TCONS_00231787	ENSCAFG00000010731	ENSCAFT00000017072	antisense	genic	0	nested	intronic
-1	XLOC_090732	TCONS_00231965	ENSCAFG00000013620	ENSCAFT00000021590	antisense	intergenic	1483	divergent	upstream
-0	XLOC_090732	TCONS_00231965	ENSCAFG00000013601	ENSCAFT00000021570	sense	intergenic	9792	same_strand	upstream
-0	XLOC_090732	TCONS_00231965	ENSCAFG00000013601	ENSCAFT00000021557	sense	intergenic	9590	same_strand	upstream
-1	XLOC_090915	TCONS_00232763	ENSCAFG00000029799	ENSCAFT00000046901	antisense	intergenic	1058	divergent	upstream
-0	XLOC_090915	TCONS_00232763	ENSCAFG00000010239	ENSCAFT00000016260	antisense	intergenic	1870	convergent	downstream
-1	XLOC_090960	TCONS_00232947	ENSCAFG00000010794	ENSCAFT00000017171	antisense	intergenic	99842	convergent	downstream
-1	XLOC_090688	TCONS_00231843	ENSCAFG00000010839	ENSCAFT00000017231	sense	intergenic	51002	same_strand	downstream
-1	XLOC_090994	TCONS_00233059	ENSCAFG00000013627	ENSCAFT00000021613	sense	intergenic	10677	same_strand	downstream
-1	XLOC_091067	TCONS_00233568	ENSCAFG00000028933	ENSCAFT00000050050	antisense	intergenic	3324	divergent	upstream
-0	XLOC_091067	TCONS_00233568	ENSCAFG00000028933	ENSCAFT00000048290	antisense	intergenic	6333	divergent	upstream
-0	XLOC_091067	TCONS_00233568	ENSCAFG00000012174	ENSCAFT00000019707	sense	intergenic	7282	same_strand	upstream
-1	XLOC_090640	TCONS_00231611	ENSCAFG00000010206	ENSCAFT00000016203	antisense	intergenic	1555	convergent	downstream
-1	XLOC_090878	TCONS_00232593	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_090620	TCONS_00231540	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	intronic
-1	XLOC_090678	TCONS_00231794	ENSCAFG00000010781	ENSCAFT00000017154	antisense	genic	0	overlapping	intronic
-0	XLOC_090678	TCONS_00231794	ENSCAFG00000010794	ENSCAFT00000017171	sense	intergenic	8293	same_strand	upstream
-0	XLOC_090678	TCONS_00231794	ENSCAFG00000010781	ENSCAFT00000017151	antisense	genic	0	nested	intronic
-1	XLOC_090878	TCONS_00232602	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_090953	TCONS_00232918	ENSCAFG00000025753	ENSCAFT00000040036	antisense	intergenic	18909	divergent	upstream
-1	XLOC_090985	TCONS_00233030	ENSCAFG00000011166	ENSCAFT00000017746	sense	intergenic	10280	same_strand	downstream
-1	XLOC_090878	TCONS_00232594	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_090974	TCONS_00232971	ENSCAFG00000010842	ENSCAFT00000017240	sense	intergenic	85066	same_strand	downstream
+1	XLOC_090641	TCONS_00231615	ENSCAFG00000010206	ENSCAFT00000016203	antisense	genic	0	overlapping	exonic
+0	XLOC_090641	TCONS_00231615	ENSCAFG00000030013	ENSCAFT00000048475	sense	intergenic	9159	same_strand	upstream
 1	XLOC_090892	TCONS_00232659	ENSCAFG00000020616	ENSCAFT00000032723	sense	intergenic	3521	same_strand	downstream
 0	XLOC_090892	TCONS_00232659	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	6524	convergent	downstream
-1	XLOC_090992	TCONS_00233057	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	68598	convergent	downstream
-1	XLOC_090860	TCONS_00232464	ENSCAFG00000009459	ENSCAFT00000015038	sense	intergenic	24831	same_strand	upstream
-0	XLOC_090860	TCONS_00232464	ENSCAFG00000009462	ENSCAFT00000015041	antisense	intergenic	29095	divergent	upstream
+1	XLOC_090743	TCONS_00232058	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	377	divergent	upstream
+1	XLOC_091083	TCONS_00233600	ENSCAFG00000031934	ENSCAFT00000048683	sense	intergenic	4985	same_strand	upstream
+1	XLOC_090970	TCONS_00232965	ENSCAFG00000021604	ENSCAFT00000033711	sense	intergenic	5524	same_strand	upstream
+1	XLOC_090707	TCONS_00231909	ENSCAFG00000011325	ENSCAFT00000018005	antisense	intergenic	6195	divergent	upstream
+0	XLOC_090707	TCONS_00231909	ENSCAFG00000031609	ENSCAFT00000047625	sense	intergenic	9383	same_strand	downstream
+1	XLOC_090675	TCONS_00231790	ENSCAFG00000010731	ENSCAFT00000017072	antisense	genic	0	nested	exonic
+1	XLOC_090639	TCONS_00231607	ENSCAFG00000010198	ENSCAFT00000016185	antisense	genic	0	overlapping	exonic
+1	XLOC_090878	TCONS_00232594	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
+1	XLOC_090599	TCONS_00231419	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	8242	same_strand	downstream
+1	XLOC_090634	TCONS_00231596	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2409	divergent	upstream
+1	XLOC_090628	TCONS_00231553	ENSCAFG00000025208	ENSCAFT00000039078	antisense	intergenic	1622	divergent	upstream
+0	XLOC_090628	TCONS_00231553	ENSCAFG00000010051	ENSCAFT00000015981	sense	intergenic	4505	same_strand	upstream
+1	XLOC_090974	TCONS_00232973	ENSCAFG00000010842	ENSCAFT00000017240	sense	intergenic	44952	same_strand	downstream
+1	XLOC_090640	TCONS_00231611	ENSCAFG00000010206	ENSCAFT00000016203	antisense	intergenic	1555	convergent	downstream
+1	XLOC_090620	TCONS_00231533	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	exonic
+0	XLOC_090620	TCONS_00231533	ENSCAFG00000009970	ENSCAFT00000015870	antisense	intergenic	657	divergent	upstream
+1	XLOC_090829	TCONS_00232406	ENSCAFG00000025115	ENSCAFT00000018582	antisense	genic	0	overlapping	exonic
+0	XLOC_090829	TCONS_00232406	ENSCAFG00000025115	ENSCAFT00000018604	antisense	intergenic	9767	convergent	downstream
+1	XLOC_090829	TCONS_00232405	ENSCAFG00000025115	ENSCAFT00000018582	antisense	genic	0	overlapping	exonic
+0	XLOC_090829	TCONS_00232405	ENSCAFG00000025115	ENSCAFT00000018604	antisense	intergenic	9767	convergent	downstream
+1	XLOC_090822	TCONS_00232391	ENSCAFG00000011747	ENSCAFT00000018659	sense	intergenic	10055	same_strand	downstream
+1	XLOC_090689	TCONS_00231844	ENSCAFG00000010839	ENSCAFT00000017231	sense	intergenic	59856	same_strand	downstream
+1	XLOC_090707	TCONS_00231907	ENSCAFG00000011325	ENSCAFT00000018005	antisense	intergenic	6195	divergent	upstream
+0	XLOC_090707	TCONS_00231907	ENSCAFG00000031609	ENSCAFT00000047625	sense	intergenic	9383	same_strand	downstream
+1	XLOC_090777	TCONS_00232178	ENSCAFG00000012732	ENSCAFT00000020175	antisense	intergenic	2331	divergent	upstream
+0	XLOC_090777	TCONS_00232178	ENSCAFG00000012722	ENSCAFT00000020174	sense	intergenic	3019	same_strand	upstream
+0	XLOC_090777	TCONS_00232178	ENSCAFG00000012733	ENSCAFT00000020181	sense	intergenic	5163	same_strand	downstream
+1	XLOC_090628	TCONS_00231554	ENSCAFG00000025208	ENSCAFT00000039078	antisense	intergenic	1622	divergent	upstream
+0	XLOC_090628	TCONS_00231554	ENSCAFG00000010051	ENSCAFT00000015981	sense	intergenic	4505	same_strand	upstream
+1	XLOC_090606	TCONS_00231444	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	overlapping	exonic
+0	XLOC_090606	TCONS_00231444	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	644	divergent	upstream
+1	XLOC_090763	TCONS_00232140	ENSCAFG00000012997	ENSCAFT00000020633	sense	intergenic	37730	same_strand	upstream
+1	XLOC_090827	TCONS_00232398	ENSCAFG00000025115	ENSCAFT00000018582	antisense	intergenic	8283	convergent	downstream
+1	XLOC_090627	TCONS_00231552	ENSCAFG00000010038	ENSCAFT00000015965	antisense	intergenic	1824	convergent	downstream
+1	XLOC_090727	TCONS_00231957	ENSCAFG00000013637	ENSCAFT00000021622	sense	genic	0	containing	intronic
+1	XLOC_090968	TCONS_00232961	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	11872	convergent	downstream
+1	XLOC_090744	TCONS_00232062	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	28636	same_strand	upstream
+1	XLOC_090966	TCONS_00232957	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	174	divergent	upstream
+1	XLOC_090620	TCONS_00231539	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	intronic
+1	XLOC_090690	TCONS_00231846	ENSCAFG00000021604	ENSCAFT00000033711	antisense	genic	0	containing	intronic
+1	XLOC_091060	TCONS_00233540	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	369	same_strand	downstream
+1	XLOC_090634	TCONS_00231600	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2414	divergent	upstream
+1	XLOC_090606	TCONS_00231446	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
+0	XLOC_090606	TCONS_00231446	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
+1	XLOC_090992	TCONS_00233055	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	40976	convergent	downstream
+1	XLOC_090683	TCONS_00231829	ENSCAFG00000010815	ENSCAFT00000017213	sense	intergenic	19283	same_strand	downstream
+1	XLOC_090991	TCONS_00233052	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	27440	convergent	downstream
+1	XLOC_090675	TCONS_00231789	ENSCAFG00000010731	ENSCAFT00000017072	antisense	genic	0	nested	exonic
+1	XLOC_090925	TCONS_00232810	ENSCAFG00000010525	ENSCAFT00000016748	sense	intergenic	20055	same_strand	downstream
+1	XLOC_090599	TCONS_00231405	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
+1	XLOC_090961	TCONS_00232948	ENSCAFG00000010835	ENSCAFT00000017226	antisense	intergenic	16040	divergent	upstream
+1	XLOC_090994	TCONS_00233059	ENSCAFG00000013627	ENSCAFT00000021613	sense	intergenic	10677	same_strand	downstream
+1	XLOC_091013	TCONS_00233149	ENSCAFG00000013259	ENSCAFT00000021052	sense	intergenic	55054	same_strand	downstream
+1	XLOC_090878	TCONS_00232598	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
+1	XLOC_090664	TCONS_00231756	ENSCAFG00000010603	ENSCAFT00000016853	antisense	intergenic	77031	divergent	upstream
+1	XLOC_090862	TCONS_00232466	ENSCAFG00000031149	ENSCAFT00000047341	antisense	genic	0	overlapping	exonic
+1	XLOC_090700	TCONS_00231871	ENSCAFG00000011125	ENSCAFT00000017715	antisense	genic	0	overlapping	exonic
+1	XLOC_090953	TCONS_00232920	ENSCAFG00000025753	ENSCAFT00000040036	antisense	genic	0	containing	intronic
+1	XLOC_090947	TCONS_00232887	ENSCAFG00000028763	ENSCAFT00000050209	sense	genic	0	containing	intronic
+0	XLOC_090947	TCONS_00232887	ENSCAFG00000002103	ENSCAFT00000013152	antisense	genic	0	containing	intronic
+0	XLOC_090947	TCONS_00232887	ENSCAFG00000029859	ENSCAFT00000048330	sense	genic	0	containing	intronic
+1	XLOC_090727	TCONS_00231958	ENSCAFG00000013637	ENSCAFT00000021622	sense	genic	0	containing	intronic
+1	XLOC_090849	TCONS_00232439	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	7303	divergent	upstream
+0	XLOC_090849	TCONS_00232439	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	8228	divergent	upstream
+1	XLOC_090943	TCONS_00232879	ENSCAFG00000010624	ENSCAFT00000016924	antisense	intergenic	25119	divergent	upstream
+1	XLOC_090966	TCONS_00232959	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	21521	divergent	upstream
+1	XLOC_090606	TCONS_00231449	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
+0	XLOC_090606	TCONS_00231449	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
 1	XLOC_090606	TCONS_00231450	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
 0	XLOC_090606	TCONS_00231450	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
-1	XLOC_090707	TCONS_00231910	ENSCAFG00000011325	ENSCAFT00000018005	antisense	intergenic	6195	divergent	upstream
-0	XLOC_090707	TCONS_00231910	ENSCAFG00000031609	ENSCAFT00000047625	sense	intergenic	9383	same_strand	downstream
+1	XLOC_090633	TCONS_00231588	ENSCAFG00000010144	ENSCAFT00000016113	antisense	intergenic	8054	divergent	upstream
+1	XLOC_090737	TCONS_00232010	ENSCAFG00000013502	ENSCAFT00000021419	antisense	genic	0	nested	exonic
+1	XLOC_090743	TCONS_00232057	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	377	divergent	upstream
+1	XLOC_090971	TCONS_00232967	ENSCAFG00000021604	ENSCAFT00000033711	sense	intergenic	81822	same_strand	upstream
+1	XLOC_090639	TCONS_00231608	ENSCAFG00000010198	ENSCAFT00000016185	antisense	genic	0	overlapping	exonic
+1	XLOC_090802	TCONS_00232322	ENSCAFG00000028933	ENSCAFT00000050050	sense	intergenic	779	same_strand	upstream
+0	XLOC_090802	TCONS_00232322	ENSCAFG00000028933	ENSCAFT00000048290	sense	intergenic	3788	same_strand	upstream
+0	XLOC_090802	TCONS_00232322	ENSCAFG00000012174	ENSCAFT00000019707	antisense	intergenic	3732	divergent	upstream
+0	XLOC_090802	TCONS_00232322	ENSCAFG00000032332	ENSCAFT00000047817	antisense	intergenic	8255	convergent	downstream
+1	XLOC_090729	TCONS_00231961	ENSCAFG00000013637	ENSCAFT00000021622	sense	intergenic	95727	same_strand	downstream
+1	XLOC_090992	TCONS_00233056	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	40976	convergent	downstream
+1	XLOC_090785	TCONS_00232221	ENSCAFG00000012621	ENSCAFT00000020056	antisense	intergenic	5831	divergent	upstream
+1	XLOC_090943	TCONS_00232880	ENSCAFG00000010624	ENSCAFT00000016924	antisense	intergenic	25023	divergent	upstream
+1	XLOC_090831	TCONS_00232408	ENSCAFG00000011692	ENSCAFT00000018544	sense	intergenic	12346	same_strand	upstream
+0	XLOC_090831	TCONS_00232408	ENSCAFG00000011706	ENSCAFT00000018594	antisense	intergenic	14517	divergent	upstream
+1	XLOC_090618	TCONS_00231522	ENSCAFG00000009901	ENSCAFT00000049341	sense	intergenic	10016	same_strand	downstream
+0	XLOC_090618	TCONS_00231522	ENSCAFG00000009901	ENSCAFT00000015800	sense	intergenic	10019	same_strand	downstream
+0	XLOC_090618	TCONS_00231522	ENSCAFG00000009901	ENSCAFT00000046245	sense	intergenic	10016	same_strand	downstream
+0	XLOC_090618	TCONS_00231522	ENSCAFG00000024609	ENSCAFT00000037921	sense	intergenic	18666	same_strand	upstream
+1	XLOC_091032	TCONS_00233351	ENSCAFG00000013015	ENSCAFT00000020665	antisense	intergenic	15339	divergent	upstream
+1	XLOC_090599	TCONS_00231410	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
+1	XLOC_090802	TCONS_00232318	ENSCAFG00000012174	ENSCAFT00000019707	antisense	intergenic	576	divergent	upstream
+0	XLOC_090802	TCONS_00232318	ENSCAFG00000032332	ENSCAFT00000047817	antisense	intergenic	8255	convergent	downstream
+0	XLOC_090802	TCONS_00232318	ENSCAFG00000028933	ENSCAFT00000050050	sense	intergenic	779	same_strand	upstream
+0	XLOC_090802	TCONS_00232318	ENSCAFG00000028933	ENSCAFT00000048290	sense	intergenic	3788	same_strand	upstream
+1	XLOC_090599	TCONS_00231406	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
 1	XLOC_090752	TCONS_00232085	ENSCAFG00000013259	ENSCAFT00000021052	antisense	intergenic	3324	divergent	upstream
-1	XLOC_090743	TCONS_00232055	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	371	divergent	upstream
-1	XLOC_090599	TCONS_00231413	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090794	TCONS_00232274	ENSCAFG00000023704	ENSCAFT00000036617	sense	intergenic	7324	same_strand	downstream
-1	XLOC_090732	TCONS_00231967	ENSCAFG00000013620	ENSCAFT00000021590	antisense	intergenic	2151	divergent	upstream
-0	XLOC_090732	TCONS_00231967	ENSCAFG00000013601	ENSCAFT00000021570	sense	intergenic	9792	same_strand	upstream
-0	XLOC_090732	TCONS_00231967	ENSCAFG00000013601	ENSCAFT00000021557	sense	intergenic	9590	same_strand	upstream
+1	XLOC_091082	TCONS_00233594	ENSCAFG00000031934	ENSCAFT00000048683	sense	intergenic	1773	same_strand	downstream
+1	XLOC_090743	TCONS_00232056	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	377	divergent	upstream
+1	XLOC_090849	TCONS_00232436	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	6167	divergent	upstream
+0	XLOC_090849	TCONS_00232436	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	7092	divergent	upstream
+1	XLOC_090599	TCONS_00231408	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
 1	XLOC_090732	TCONS_00231964	ENSCAFG00000013620	ENSCAFT00000021590	antisense	intergenic	1471	divergent	upstream
 0	XLOC_090732	TCONS_00231964	ENSCAFG00000013601	ENSCAFT00000021557	sense	intergenic	9590	same_strand	upstream
 0	XLOC_090732	TCONS_00231964	ENSCAFG00000013601	ENSCAFT00000021570	sense	intergenic	9792	same_strand	upstream
-1	XLOC_090788	TCONS_00232240	ENSCAFG00000012579	ENSCAFT00000019982	sense	intergenic	1068	same_strand	downstream
-1	XLOC_090683	TCONS_00231828	ENSCAFG00000010815	ENSCAFT00000017213	sense	intergenic	19267	same_strand	downstream
-1	XLOC_090720	TCONS_00231944	ENSCAFG00000026373	ENSCAFT00000040656	sense	intergenic	66670	same_strand	upstream
-1	XLOC_090854	TCONS_00232456	ENSCAFG00000031030	ENSCAFT00000045878	antisense	genic	0	nested	exonic
-0	XLOC_090854	TCONS_00232456	ENSCAFG00000011368	ENSCAFT00000018059	sense	genic	0	nested	intronic
-0	XLOC_090854	TCONS_00232456	ENSCAFG00000011358	ENSCAFT00000018051	antisense	intergenic	7271	convergent	downstream
-0	XLOC_090854	TCONS_00232456	ENSCAFG00000011358	ENSCAFT00000049302	antisense	intergenic	6622	convergent	downstream
-1	XLOC_090743	TCONS_00232057	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	377	divergent	upstream
-1	XLOC_090726	TCONS_00231955	ENSCAFG00000013637	ENSCAFT00000021622	sense	intergenic	60824	same_strand	upstream
-1	XLOC_090802	TCONS_00232318	ENSCAFG00000012174	ENSCAFT00000019707	antisense	intergenic	576	divergent	upstream
-0	XLOC_090802	TCONS_00232318	ENSCAFG00000028933	ENSCAFT00000050050	sense	intergenic	779	same_strand	upstream
-0	XLOC_090802	TCONS_00232318	ENSCAFG00000032332	ENSCAFT00000047817	antisense	intergenic	8255	convergent	downstream
-0	XLOC_090802	TCONS_00232318	ENSCAFG00000028933	ENSCAFT00000048290	sense	intergenic	3788	same_strand	upstream
-1	XLOC_091027	TCONS_00233310	ENSCAFG00000032051	ENSCAFT00000036830	sense	intergenic	8387	same_strand	downstream
-0	XLOC_091027	TCONS_00233310	ENSCAFG00000013058	ENSCAFT00000020714	sense	intergenic	9113	same_strand	upstream
-1	XLOC_091025	TCONS_00233261	ENSCAFG00000013079	ENSCAFT00000020753	antisense	intergenic	3412	convergent	downstream
-0	XLOC_091025	TCONS_00233261	ENSCAFG00000013068	ENSCAFT00000020736	sense	intergenic	7803	same_strand	downstream
-1	XLOC_090615	TCONS_00231491	ENSCAFG00000009901	ENSCAFT00000046245	sense	intergenic	44590	same_strand	upstream
-1	XLOC_090785	TCONS_00232223	ENSCAFG00000012621	ENSCAFT00000020056	antisense	intergenic	6479	divergent	upstream
-1	XLOC_090763	TCONS_00232140	ENSCAFG00000012997	ENSCAFT00000020633	sense	intergenic	37730	same_strand	upstream
-1	XLOC_090817	TCONS_00232386	ENSCAFG00000011795	ENSCAFT00000018715	antisense	genic	0	overlapping	exonic
-1	XLOC_090878	TCONS_00232595	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_090606	TCONS_00231441	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	overlapping	exonic
-0	XLOC_090606	TCONS_00231441	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	486	divergent	upstream
-1	XLOC_090683	TCONS_00231829	ENSCAFG00000010815	ENSCAFT00000017213	sense	intergenic	19283	same_strand	downstream
-1	XLOC_090758	TCONS_00232115	ENSCAFG00000013086	ENSCAFT00000020761	antisense	genic	0	overlapping	intronic
-1	XLOC_090993	TCONS_00233058	ENSCAFG00000013627	ENSCAFT00000021613	sense	intergenic	73088	same_strand	downstream
+1	XLOC_091093	TCONS_00233634	ENSCAFG00000011731	ENSCAFT00000018655	sense	intergenic	40864	same_strand	upstream
+1	XLOC_090634	TCONS_00231594	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2408	divergent	upstream
+1	XLOC_090827	TCONS_00232400	ENSCAFG00000025115	ENSCAFT00000018582	antisense	intergenic	8283	convergent	downstream
+1	XLOC_090599	TCONS_00231402	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
+1	XLOC_090726	TCONS_00231956	ENSCAFG00000013637	ENSCAFT00000021622	sense	intergenic	74091	same_strand	upstream
+1	XLOC_091068	TCONS_00233573	ENSCAFG00000032332	ENSCAFT00000047817	sense	intergenic	1582	same_strand	upstream
+0	XLOC_091068	TCONS_00233573	ENSCAFG00000029844	ENSCAFT00000047126	antisense	intergenic	7029	divergent	upstream
+0	XLOC_091068	TCONS_00233573	ENSCAFG00000028933	ENSCAFT00000050050	antisense	intergenic	5829	convergent	downstream
+0	XLOC_091068	TCONS_00233573	ENSCAFG00000028933	ENSCAFT00000048290	antisense	intergenic	5659	convergent	downstream
+1	XLOC_090802	TCONS_00232319	ENSCAFG00000012174	ENSCAFT00000019707	antisense	intergenic	641	divergent	upstream
+0	XLOC_090802	TCONS_00232319	ENSCAFG00000032332	ENSCAFT00000047817	antisense	intergenic	8255	convergent	downstream
+0	XLOC_090802	TCONS_00232319	ENSCAFG00000028933	ENSCAFT00000048290	sense	intergenic	3788	same_strand	upstream
+0	XLOC_090802	TCONS_00232319	ENSCAFG00000028933	ENSCAFT00000050050	sense	intergenic	779	same_strand	upstream
+1	XLOC_090960	TCONS_00232947	ENSCAFG00000010794	ENSCAFT00000017171	antisense	intergenic	99842	convergent	downstream
+1	XLOC_090974	TCONS_00232974	ENSCAFG00000010842	ENSCAFT00000017240	sense	intergenic	44952	same_strand	downstream
+1	XLOC_091067	TCONS_00233569	ENSCAFG00000028933	ENSCAFT00000050050	antisense	intergenic	3304	divergent	upstream
+0	XLOC_091067	TCONS_00233569	ENSCAFG00000012174	ENSCAFT00000019707	sense	intergenic	7282	same_strand	upstream
+0	XLOC_091067	TCONS_00233569	ENSCAFG00000028933	ENSCAFT00000048290	antisense	intergenic	6313	divergent	upstream
+1	XLOC_090891	TCONS_00232655	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	855	convergent	downstream
+0	XLOC_090891	TCONS_00232655	ENSCAFG00000020616	ENSCAFT00000032723	sense	intergenic	8438	same_strand	downstream
+1	XLOC_091058	TCONS_00233516	ENSCAFG00000012566	ENSCAFT00000019952	sense	intergenic	14665	same_strand	downstream
+1	XLOC_090937	TCONS_00232868	ENSCAFG00000032530	ENSCAFT00000043356	sense	intergenic	23510	same_strand	upstream
+1	XLOC_091083	TCONS_00233601	ENSCAFG00000031934	ENSCAFT00000048683	sense	intergenic	4985	same_strand	upstream
+1	XLOC_090785	TCONS_00232222	ENSCAFG00000012621	ENSCAFT00000020056	antisense	intergenic	6282	divergent	upstream
 1	XLOC_090849	TCONS_00232437	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	6167	divergent	upstream
 0	XLOC_090849	TCONS_00232437	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	7092	divergent	upstream
-1	XLOC_090818	TCONS_00232387	ENSCAFG00000031934	ENSCAFT00000048683	antisense	intergenic	2535	divergent	upstream
-1	XLOC_090691	TCONS_00231848	ENSCAFG00000021604	ENSCAFT00000033711	antisense	intergenic	39885	divergent	upstream
-1	XLOC_090763	TCONS_00232139	ENSCAFG00000012997	ENSCAFT00000020633	sense	intergenic	43579	same_strand	upstream
-0	XLOC_090763	TCONS_00232139	ENSCAFG00000013015	ENSCAFT00000020665	sense	intergenic	49540	same_strand	downstream
-0	XLOC_090763	TCONS_00232139	ENSCAFG00000012992	ENSCAFT00000020626	antisense	intergenic	49059	convergent	downstream
-0	XLOC_090763	TCONS_00232139	ENSCAFG00000012992	ENSCAFT00000020625	antisense	intergenic	49065	convergent	downstream
-1	XLOC_090849	TCONS_00232438	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	7271	divergent	upstream
-0	XLOC_090849	TCONS_00232438	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	8196	divergent	upstream
-1	XLOC_091060	TCONS_00233537	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	4235	same_strand	downstream
-1	XLOC_090849	TCONS_00232433	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	6167	divergent	upstream
-0	XLOC_090849	TCONS_00232433	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	7092	divergent	upstream
-1	XLOC_090892	TCONS_00232661	ENSCAFG00000020616	ENSCAFT00000032723	sense	genic	0	containing	intronic
-0	XLOC_090892	TCONS_00232661	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	6524	convergent	downstream
-1	XLOC_090961	TCONS_00232948	ENSCAFG00000010835	ENSCAFT00000017226	antisense	intergenic	16040	divergent	upstream
-1	XLOC_090652	TCONS_00231713	ENSCAFG00000021533	ENSCAFT00000033640	antisense	intergenic	28415	convergent	downstream
-1	XLOC_090970	TCONS_00232966	ENSCAFG00000021604	ENSCAFT00000033711	sense	intergenic	5524	same_strand	upstream
-1	XLOC_090599	TCONS_00231419	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	8242	same_strand	downstream
-1	XLOC_090606	TCONS_00231443	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	overlapping	exonic
-0	XLOC_090606	TCONS_00231443	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	642	divergent	upstream
-1	XLOC_090892	TCONS_00232660	ENSCAFG00000020616	ENSCAFT00000032723	sense	genic	0	containing	exonic
-0	XLOC_090892	TCONS_00232660	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	6524	convergent	downstream
-1	XLOC_090966	TCONS_00232956	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	174	divergent	upstream
-1	XLOC_090639	TCONS_00231610	ENSCAFG00000010198	ENSCAFT00000016185	antisense	genic	0	overlapping	exonic
-1	XLOC_090606	TCONS_00231451	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
-0	XLOC_090606	TCONS_00231451	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
-1	XLOC_090817	TCONS_00232385	ENSCAFG00000011795	ENSCAFT00000018715	antisense	genic	0	overlapping	exonic
+1	XLOC_090685	TCONS_00231831	ENSCAFG00000026633	ENSCAFT00000040916	antisense	intergenic	90567	divergent	upstream
+1	XLOC_090744	TCONS_00232064	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	28636	same_strand	upstream
+1	XLOC_090724	TCONS_00231951	ENSCAFG00000013641	ENSCAFT00000021629	antisense	intergenic	2551	divergent	upstream
+1	XLOC_090795	TCONS_00232276	ENSCAFG00000012566	ENSCAFT00000019952	antisense	intergenic	24437	convergent	downstream
+0	XLOC_090795	TCONS_00232276	ENSCAFG00000023704	ENSCAFT00000036617	sense	intergenic	26617	same_strand	downstream
+1	XLOC_090849	TCONS_00232435	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	6167	divergent	upstream
+0	XLOC_090849	TCONS_00232435	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	7092	divergent	upstream
+1	XLOC_090720	TCONS_00231945	ENSCAFG00000026373	ENSCAFT00000040656	sense	intergenic	66670	same_strand	upstream
+1	XLOC_090732	TCONS_00231965	ENSCAFG00000013620	ENSCAFT00000021590	antisense	intergenic	1483	divergent	upstream
+0	XLOC_090732	TCONS_00231965	ENSCAFG00000013601	ENSCAFT00000021570	sense	intergenic	9792	same_strand	upstream
+0	XLOC_090732	TCONS_00231965	ENSCAFG00000013601	ENSCAFT00000021557	sense	intergenic	9590	same_strand	upstream
+1	XLOC_090993	TCONS_00233058	ENSCAFG00000013627	ENSCAFT00000021613	sense	intergenic	73088	same_strand	downstream
+1	XLOC_090744	TCONS_00232063	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	35060	same_strand	upstream
+1	XLOC_090599	TCONS_00231415	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	8145	same_strand	downstream
+1	XLOC_090688	TCONS_00231842	ENSCAFG00000010839	ENSCAFT00000017231	sense	intergenic	51002	same_strand	downstream
+1	XLOC_090966	TCONS_00232955	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	174	divergent	upstream
+1	XLOC_090606	TCONS_00231445	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
+0	XLOC_090606	TCONS_00231445	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
+1	XLOC_091056	TCONS_00233512	ENSCAFG00000023704	ENSCAFT00000036617	antisense	genic	0	overlapping	exonic
+1	XLOC_090937	TCONS_00232867	ENSCAFG00000032530	ENSCAFT00000043356	sense	intergenic	18647	same_strand	upstream
+1	XLOC_090953	TCONS_00232918	ENSCAFG00000025753	ENSCAFT00000040036	antisense	intergenic	18909	divergent	upstream
+1	XLOC_090634	TCONS_00231597	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2410	divergent	upstream
+1	XLOC_090725	TCONS_00231953	ENSCAFG00000013641	ENSCAFT00000021629	antisense	intergenic	86041	divergent	upstream
+1	XLOC_090970	TCONS_00232964	ENSCAFG00000021604	ENSCAFT00000033711	sense	intergenic	5524	same_strand	upstream
+1	XLOC_090606	TCONS_00231442	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	overlapping	exonic
+0	XLOC_090606	TCONS_00231442	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	625	divergent	upstream
+1	XLOC_090878	TCONS_00232597	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
+1	XLOC_090878	TCONS_00232600	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
+1	XLOC_090878	TCONS_00232602	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
+1	XLOC_091073	TCONS_00233579	ENSCAFG00000011857	ENSCAFT00000018829	antisense	genic	0	overlapping	exonic
+0	XLOC_091073	TCONS_00233579	ENSCAFG00000011835	ENSCAFT00000018806	antisense	intergenic	6095	divergent	upstream
+1	XLOC_090905	TCONS_00232716	ENSCAFG00000010180	ENSCAFT00000016167	sense	intergenic	174	same_strand	downstream
+1	XLOC_090620	TCONS_00231537	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	exonic
+1	XLOC_090707	TCONS_00231908	ENSCAFG00000011325	ENSCAFT00000018005	antisense	intergenic	6195	divergent	upstream
+0	XLOC_090707	TCONS_00231908	ENSCAFG00000031609	ENSCAFT00000047625	sense	intergenic	9383	same_strand	downstream
+1	XLOC_090795	TCONS_00232275	ENSCAFG00000012566	ENSCAFT00000019952	antisense	intergenic	24437	convergent	downstream
+0	XLOC_090795	TCONS_00232275	ENSCAFG00000023704	ENSCAFT00000036617	sense	intergenic	26617	same_strand	downstream
+1	XLOC_090915	TCONS_00232763	ENSCAFG00000029799	ENSCAFT00000046901	antisense	intergenic	1058	divergent	upstream
+0	XLOC_090915	TCONS_00232763	ENSCAFG00000010239	ENSCAFT00000016260	antisense	intergenic	1870	convergent	downstream
+1	XLOC_090817	TCONS_00232386	ENSCAFG00000011795	ENSCAFT00000018715	antisense	genic	0	overlapping	exonic
 1	XLOC_090827	TCONS_00232403	ENSCAFG00000025115	ENSCAFT00000018582	antisense	intergenic	8283	convergent	downstream
-1	XLOC_090620	TCONS_00231532	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	intronic
-0	XLOC_090620	TCONS_00231532	ENSCAFG00000009970	ENSCAFT00000015870	antisense	intergenic	517	divergent	upstream
-1	XLOC_090599	TCONS_00231403	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090892	TCONS_00232657	ENSCAFG00000020616	ENSCAFT00000032723	sense	intergenic	4060	same_strand	downstream
-0	XLOC_090892	TCONS_00232657	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	6524	convergent	downstream
-1	XLOC_091055	TCONS_00233511	ENSCAFG00000012569	ENSCAFT00000019970	antisense	genic	0	overlapping	intronic
 1	XLOC_090606	TCONS_00231447	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
 0	XLOC_090606	TCONS_00231447	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
-1	XLOC_090724	TCONS_00231951	ENSCAFG00000013641	ENSCAFT00000021629	antisense	intergenic	2551	divergent	upstream
-1	XLOC_090966	TCONS_00232959	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	21521	divergent	upstream
-1	XLOC_090744	TCONS_00232062	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	28636	same_strand	upstream
-1	XLOC_090599	TCONS_00231409	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090943	TCONS_00232881	ENSCAFG00000010624	ENSCAFT00000016924	antisense	intergenic	22770	divergent	upstream
-1	XLOC_090974	TCONS_00232972	ENSCAFG00000010842	ENSCAFT00000017240	sense	intergenic	85066	same_strand	downstream
-1	XLOC_090827	TCONS_00232399	ENSCAFG00000025115	ENSCAFT00000018582	antisense	intergenic	8283	convergent	downstream
-1	XLOC_090641	TCONS_00231615	ENSCAFG00000010206	ENSCAFT00000016203	antisense	genic	0	overlapping	exonic
-0	XLOC_090641	TCONS_00231615	ENSCAFG00000030013	ENSCAFT00000048475	sense	intergenic	9159	same_strand	upstream
-1	XLOC_090878	TCONS_00232599	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_090796	TCONS_00232278	ENSCAFG00000012557	ENSCAFT00000019943	antisense	intergenic	1787	convergent	downstream
-0	XLOC_090796	TCONS_00232278	ENSCAFG00000023513	ENSCAFT00000036175	antisense	intergenic	4482	divergent	upstream
-1	XLOC_090634	TCONS_00231598	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2410	divergent	upstream
-1	XLOC_090974	TCONS_00232975	ENSCAFG00000010842	ENSCAFT00000017240	sense	intergenic	44952	same_strand	downstream
-1	XLOC_090620	TCONS_00231537	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	exonic
-1	XLOC_090937	TCONS_00232867	ENSCAFG00000032530	ENSCAFT00000043356	sense	intergenic	18647	same_strand	upstream
-1	XLOC_090606	TCONS_00231453	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
-0	XLOC_090606	TCONS_00231453	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2140	divergent	upstream
-1	XLOC_090690	TCONS_00231845	ENSCAFG00000021604	ENSCAFT00000033711	antisense	genic	0	containing	intronic
-1	XLOC_090707	TCONS_00231908	ENSCAFG00000011325	ENSCAFT00000018005	antisense	intergenic	6195	divergent	upstream
-0	XLOC_090707	TCONS_00231908	ENSCAFG00000031609	ENSCAFT00000047625	sense	intergenic	9383	same_strand	downstream
-1	XLOC_090991	TCONS_00233052	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	27440	convergent	downstream
-1	XLOC_090849	TCONS_00232439	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	7303	divergent	upstream
-0	XLOC_090849	TCONS_00232439	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	8228	divergent	upstream
-1	XLOC_090620	TCONS_00231531	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	exonic
-0	XLOC_090620	TCONS_00231531	ENSCAFG00000009970	ENSCAFT00000015870	antisense	intergenic	516	divergent	upstream
-1	XLOC_091058	TCONS_00233515	ENSCAFG00000012566	ENSCAFT00000019952	sense	intergenic	14689	same_strand	downstream
-1	XLOC_090599	TCONS_00231406	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090822	TCONS_00232391	ENSCAFG00000011747	ENSCAFT00000018659	sense	intergenic	10055	same_strand	downstream
-1	XLOC_090606	TCONS_00231442	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	overlapping	exonic
-0	XLOC_090606	TCONS_00231442	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	625	divergent	upstream
-1	XLOC_091083	TCONS_00233601	ENSCAFG00000031934	ENSCAFT00000048683	sense	intergenic	4985	same_strand	upstream
-1	XLOC_090634	TCONS_00231597	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2410	divergent	upstream
-1	XLOC_090729	TCONS_00231961	ENSCAFG00000013637	ENSCAFT00000021622	sense	intergenic	95727	same_strand	downstream
-1	XLOC_090943	TCONS_00232880	ENSCAFG00000010624	ENSCAFT00000016924	antisense	intergenic	25023	divergent	upstream
-1	XLOC_090743	TCONS_00232053	ENSCAFG00000013346	ENSCAFT00000021186	antisense	genic	0	overlapping	intronic
-1	XLOC_091084	TCONS_00233602	ENSCAFG00000031934	ENSCAFT00000048683	sense	intergenic	22216	same_strand	upstream
-0	XLOC_091084	TCONS_00233602	ENSCAFG00000011787	ENSCAFT00000018706	antisense	intergenic	27625	divergent	upstream
+1	XLOC_090652	TCONS_00231715	ENSCAFG00000021533	ENSCAFT00000033640	antisense	genic	0	containing	intronic
+1	XLOC_090794	TCONS_00232274	ENSCAFG00000023704	ENSCAFT00000036617	sense	intergenic	7324	same_strand	downstream
+1	XLOC_090707	TCONS_00231910	ENSCAFG00000011325	ENSCAFT00000018005	antisense	intergenic	6195	divergent	upstream
+0	XLOC_090707	TCONS_00231910	ENSCAFG00000031609	ENSCAFT00000047625	sense	intergenic	9383	same_strand	downstream
 1	XLOC_090752	TCONS_00232088	ENSCAFG00000013259	ENSCAFT00000021052	antisense	intergenic	3326	divergent	upstream
-1	XLOC_090662	TCONS_00231753	ENSCAFG00000010595	ENSCAFT00000044512	antisense	intergenic	66882	convergent	downstream
-0	XLOC_090662	TCONS_00231753	ENSCAFG00000010595	ENSCAFT00000016835	antisense	intergenic	69592	convergent	downstream
-1	XLOC_090599	TCONS_00231417	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	8242	same_strand	downstream
-1	XLOC_090726	TCONS_00231954	ENSCAFG00000013637	ENSCAFT00000021622	sense	intergenic	60824	same_strand	upstream
-1	XLOC_090943	TCONS_00232879	ENSCAFG00000010624	ENSCAFT00000016924	antisense	intergenic	25119	divergent	upstream
-1	XLOC_090961	TCONS_00232949	ENSCAFG00000010835	ENSCAFT00000017226	antisense	intergenic	226	divergent	upstream
-1	XLOC_090994	TCONS_00233060	ENSCAFG00000013627	ENSCAFT00000021613	sense	intergenic	10266	same_strand	downstream
-1	XLOC_090785	TCONS_00232222	ENSCAFG00000012621	ENSCAFT00000020056	antisense	intergenic	6282	divergent	upstream
-1	XLOC_090725	TCONS_00231953	ENSCAFG00000013641	ENSCAFT00000021629	antisense	intergenic	86041	divergent	upstream
-1	XLOC_090606	TCONS_00231444	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	overlapping	exonic
-0	XLOC_090606	TCONS_00231444	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	644	divergent	upstream
-1	XLOC_091082	TCONS_00233594	ENSCAFG00000031934	ENSCAFT00000048683	sense	intergenic	1773	same_strand	downstream
-1	XLOC_090971	TCONS_00232967	ENSCAFG00000021604	ENSCAFT00000033711	sense	intergenic	81822	same_strand	upstream
-1	XLOC_090827	TCONS_00232401	ENSCAFG00000025115	ENSCAFT00000018582	antisense	intergenic	8283	convergent	downstream
-1	XLOC_090905	TCONS_00232716	ENSCAFG00000010180	ENSCAFT00000016167	sense	intergenic	174	same_strand	downstream
-1	XLOC_090658	TCONS_00231722	ENSCAFG00000010525	ENSCAFT00000016748	antisense	intergenic	9853	divergent	upstream
-1	XLOC_091060	TCONS_00233536	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	4446	same_strand	downstream
-1	XLOC_090892	TCONS_00232662	ENSCAFG00000020616	ENSCAFT00000032723	sense	genic	0	containing	intronic
-0	XLOC_090892	TCONS_00232662	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	6524	convergent	downstream
-1	XLOC_090878	TCONS_00232596	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_091093	TCONS_00233634	ENSCAFG00000011731	ENSCAFT00000018655	sense	intergenic	40864	same_strand	upstream
-1	XLOC_090827	TCONS_00232398	ENSCAFG00000025115	ENSCAFT00000018582	antisense	intergenic	8283	convergent	downstream
+1	XLOC_090878	TCONS_00232601	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
+1	XLOC_090599	TCONS_00231403	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
+1	XLOC_091013	TCONS_00233148	ENSCAFG00000013259	ENSCAFT00000021052	sense	intergenic	55618	same_strand	downstream
+1	XLOC_090743	TCONS_00232055	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	371	divergent	upstream
+1	XLOC_091071	TCONS_00233577	ENSCAFG00000011865	ENSCAFT00000018843	antisense	genic	0	overlapping	exonic
+0	XLOC_091071	TCONS_00233577	ENSCAFG00000029844	ENSCAFT00000047126	antisense	intergenic	7805	convergent	downstream
+1	XLOC_090694	TCONS_00231853	ENSCAFG00000010842	ENSCAFT00000017240	antisense	genic	0	overlapping	intronic
 1	XLOC_090998	TCONS_00233083	ENSCAFG00000013601	ENSCAFT00000021557	antisense	genic	0	overlapping	exonic
 0	XLOC_090998	TCONS_00233083	ENSCAFG00000013540	ENSCAFT00000021486	sense	intergenic	2616	same_strand	downstream
 0	XLOC_090998	TCONS_00233083	ENSCAFG00000013601	ENSCAFT00000021570	antisense	intergenic	72	convergent	downstream
-1	XLOC_090618	TCONS_00231522	ENSCAFG00000009901	ENSCAFT00000049341	sense	intergenic	10016	same_strand	downstream
-0	XLOC_090618	TCONS_00231522	ENSCAFG00000024609	ENSCAFT00000037921	sense	intergenic	18666	same_strand	upstream
-0	XLOC_090618	TCONS_00231522	ENSCAFG00000009901	ENSCAFT00000046245	sense	intergenic	10016	same_strand	downstream
-0	XLOC_090618	TCONS_00231522	ENSCAFG00000009901	ENSCAFT00000015800	sense	intergenic	10019	same_strand	downstream
-1	XLOC_090633	TCONS_00231591	ENSCAFG00000010144	ENSCAFT00000016113	antisense	intergenic	8145	divergent	upstream
-1	XLOC_090688	TCONS_00231841	ENSCAFG00000010839	ENSCAFT00000017231	sense	intergenic	34682	same_strand	downstream
-1	XLOC_091032	TCONS_00233352	ENSCAFG00000013015	ENSCAFT00000020665	antisense	intergenic	13332	divergent	upstream
-1	XLOC_090820	TCONS_00232389	ENSCAFG00000011785	ENSCAFT00000018701	antisense	intergenic	4174	convergent	downstream
-1	XLOC_090620	TCONS_00231533	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	exonic
-0	XLOC_090620	TCONS_00231533	ENSCAFG00000009970	ENSCAFT00000015870	antisense	intergenic	657	divergent	upstream
-1	XLOC_090752	TCONS_00232089	ENSCAFG00000013259	ENSCAFT00000021052	antisense	intergenic	3327	divergent	upstream
+1	XLOC_090620	TCONS_00231531	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	exonic
+0	XLOC_090620	TCONS_00231531	ENSCAFG00000009970	ENSCAFT00000015870	antisense	intergenic	516	divergent	upstream
+1	XLOC_090599	TCONS_00231417	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	8242	same_strand	downstream
+1	XLOC_090992	TCONS_00233057	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	68598	convergent	downstream
+1	XLOC_090878	TCONS_00232603	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
+1	XLOC_091055	TCONS_00233511	ENSCAFG00000012569	ENSCAFT00000019970	antisense	genic	0	overlapping	intronic
+1	XLOC_091111	TCONS_00233707	ENSCAFG00000030554	ENSCAFT00000018156	sense	intergenic	3652	same_strand	upstream
+0	XLOC_091111	TCONS_00233707	ENSCAFG00000030554	ENSCAFT00000018170	sense	intergenic	4577	same_strand	upstream
 1	XLOC_091024	TCONS_00233259	ENSCAFG00000013079	ENSCAFT00000020753	antisense	genic	0	overlapping	exonic
-1	XLOC_091062	TCONS_00233543	ENSCAFG00000012557	ENSCAFT00000019943	sense	intergenic	2148	same_strand	downstream
-0	XLOC_091062	TCONS_00233543	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	5770	same_strand	upstream
 1	XLOC_090633	TCONS_00231590	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	4962	convergent	downstream
 0	XLOC_090633	TCONS_00231590	ENSCAFG00000010144	ENSCAFT00000016113	antisense	intergenic	8138	divergent	upstream
-1	XLOC_090829	TCONS_00232405	ENSCAFG00000025115	ENSCAFT00000018582	antisense	genic	0	overlapping	exonic
-0	XLOC_090829	TCONS_00232405	ENSCAFG00000025115	ENSCAFT00000018604	antisense	intergenic	9767	convergent	downstream
-1	XLOC_090724	TCONS_00231952	ENSCAFG00000013641	ENSCAFT00000021629	antisense	intergenic	3720	divergent	upstream
-1	XLOC_090758	TCONS_00232114	ENSCAFG00000013086	ENSCAFT00000020761	antisense	genic	0	overlapping	intronic
-1	XLOC_090974	TCONS_00232973	ENSCAFG00000010842	ENSCAFT00000017240	sense	intergenic	44952	same_strand	downstream
-1	XLOC_091068	TCONS_00233573	ENSCAFG00000032332	ENSCAFT00000047817	sense	intergenic	1582	same_strand	upstream
-0	XLOC_091068	TCONS_00233573	ENSCAFG00000028933	ENSCAFT00000048290	antisense	intergenic	5659	convergent	downstream
-0	XLOC_091068	TCONS_00233573	ENSCAFG00000029844	ENSCAFT00000047126	antisense	intergenic	7029	divergent	upstream
-0	XLOC_091068	TCONS_00233573	ENSCAFG00000028933	ENSCAFT00000050050	antisense	intergenic	5829	convergent	downstream
-1	XLOC_090599	TCONS_00231401	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090785	TCONS_00232224	ENSCAFG00000012621	ENSCAFT00000020056	antisense	intergenic	7630	divergent	upstream
+1	XLOC_090892	TCONS_00232662	ENSCAFG00000020616	ENSCAFT00000032723	sense	genic	0	containing	intronic
+0	XLOC_090892	TCONS_00232662	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	6524	convergent	downstream
+1	XLOC_090785	TCONS_00232223	ENSCAFG00000012621	ENSCAFT00000020056	antisense	intergenic	6479	divergent	upstream
+1	XLOC_090752	TCONS_00232089	ENSCAFG00000013259	ENSCAFT00000021052	antisense	intergenic	3327	divergent	upstream
+1	XLOC_090818	TCONS_00232387	ENSCAFG00000031934	ENSCAFT00000048683	antisense	intergenic	2535	divergent	upstream
+1	XLOC_091058	TCONS_00233515	ENSCAFG00000012566	ENSCAFT00000019952	sense	intergenic	14689	same_strand	downstream
+1	XLOC_090974	TCONS_00232975	ENSCAFG00000010842	ENSCAFT00000017240	sense	intergenic	44952	same_strand	downstream
+1	XLOC_090720	TCONS_00231947	ENSCAFG00000026373	ENSCAFT00000040656	sense	intergenic	66670	same_strand	upstream
+1	XLOC_090678	TCONS_00231794	ENSCAFG00000010781	ENSCAFT00000017154	antisense	genic	0	overlapping	intronic
+0	XLOC_090678	TCONS_00231794	ENSCAFG00000010794	ENSCAFT00000017171	sense	intergenic	8293	same_strand	upstream
+0	XLOC_090678	TCONS_00231794	ENSCAFG00000010781	ENSCAFT00000017151	antisense	genic	0	nested	intronic
+1	XLOC_090683	TCONS_00231828	ENSCAFG00000010815	ENSCAFT00000017213	sense	intergenic	19267	same_strand	downstream
+1	XLOC_090970	TCONS_00232966	ENSCAFG00000021604	ENSCAFT00000033711	sense	intergenic	5524	same_strand	upstream
+1	XLOC_091058	TCONS_00233514	ENSCAFG00000012566	ENSCAFT00000019952	sense	intergenic	15062	same_strand	downstream
+1	XLOC_090752	TCONS_00232086	ENSCAFG00000013259	ENSCAFT00000021052	antisense	intergenic	3325	divergent	upstream
+1	XLOC_090744	TCONS_00232060	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	32820	divergent	upstream
+0	XLOC_090744	TCONS_00232060	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	35060	same_strand	upstream
+1	XLOC_091060	TCONS_00233537	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	4235	same_strand	downstream
+1	XLOC_090743	TCONS_00232054	ENSCAFG00000013346	ENSCAFT00000021186	antisense	genic	0	overlapping	intronic
 1	XLOC_091093	TCONS_00233633	ENSCAFG00000011731	ENSCAFT00000018655	sense	intergenic	40864	same_strand	upstream
-1	XLOC_090620	TCONS_00231538	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	exonic
-1	XLOC_090634	TCONS_00231601	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	3157	divergent	upstream
+1	XLOC_090606	TCONS_00231443	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	overlapping	exonic
+0	XLOC_090606	TCONS_00231443	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	642	divergent	upstream
+1	XLOC_090720	TCONS_00231943	ENSCAFG00000026373	ENSCAFT00000040656	sense	intergenic	66670	same_strand	upstream
+1	XLOC_090758	TCONS_00232115	ENSCAFG00000013086	ENSCAFT00000020761	antisense	genic	0	overlapping	intronic
+1	XLOC_090994	TCONS_00233060	ENSCAFG00000013627	ENSCAFT00000021613	sense	intergenic	10266	same_strand	downstream
+1	XLOC_091084	TCONS_00233602	ENSCAFG00000031934	ENSCAFT00000048683	sense	intergenic	22216	same_strand	upstream
+0	XLOC_091084	TCONS_00233602	ENSCAFG00000011787	ENSCAFT00000018706	antisense	intergenic	27625	divergent	upstream
+1	XLOC_090915	TCONS_00232764	ENSCAFG00000029799	ENSCAFT00000046901	antisense	genic	0	overlapping	intronic
+0	XLOC_090915	TCONS_00232764	ENSCAFG00000010239	ENSCAFT00000016260	antisense	intergenic	1870	convergent	downstream
+1	XLOC_090694	TCONS_00231852	ENSCAFG00000010842	ENSCAFT00000017240	antisense	genic	0	overlapping	exonic
+1	XLOC_090892	TCONS_00232658	ENSCAFG00000020616	ENSCAFT00000032723	sense	intergenic	3555	same_strand	downstream
+0	XLOC_090892	TCONS_00232658	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	6524	convergent	downstream
 1	XLOC_090599	TCONS_00231407	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090825	TCONS_00232395	ENSCAFG00000011731	ENSCAFT00000018655	antisense	intergenic	1539	divergent	upstream
-1	XLOC_090606	TCONS_00231449	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
-0	XLOC_090606	TCONS_00231449	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
-1	XLOC_091013	TCONS_00233148	ENSCAFG00000013259	ENSCAFT00000021052	sense	intergenic	55618	same_strand	downstream
-1	XLOC_091011	TCONS_00233145	ENSCAFG00000013289	ENSCAFT00000044816	sense	genic	0	overlapping	intronic
-0	XLOC_091011	TCONS_00233145	ENSCAFG00000013289	ENSCAFT00000021112	sense	genic	0	nested	intronic
+1	XLOC_090633	TCONS_00231591	ENSCAFG00000010144	ENSCAFT00000016113	antisense	intergenic	8145	divergent	upstream
+1	XLOC_091057	TCONS_00233513	ENSCAFG00000023704	ENSCAFT00000036617	antisense	intergenic	24758	convergent	downstream
+0	XLOC_091057	TCONS_00233513	ENSCAFG00000012566	ENSCAFT00000019952	sense	intergenic	26122	same_strand	downstream
+1	XLOC_090849	TCONS_00232434	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	6167	divergent	upstream
+0	XLOC_090849	TCONS_00232434	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	7092	divergent	upstream
+1	XLOC_090989	TCONS_00233037	ENSCAFG00000011340	ENSCAFT00000018023	antisense	intergenic	5988	convergent	downstream
+1	XLOC_090878	TCONS_00232595	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
+1	XLOC_090991	TCONS_00233054	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	27440	convergent	downstream
+1	XLOC_090947	TCONS_00232886	ENSCAFG00000029859	ENSCAFT00000048330	sense	genic	0	containing	intronic
+0	XLOC_090947	TCONS_00232886	ENSCAFG00000002103	ENSCAFT00000013152	antisense	genic	0	containing	intronic
+0	XLOC_090947	TCONS_00232886	ENSCAFG00000028763	ENSCAFT00000050209	sense	genic	0	containing	intronic
+1	XLOC_090726	TCONS_00231954	ENSCAFG00000013637	ENSCAFT00000021622	sense	intergenic	60824	same_strand	upstream
+1	XLOC_090892	TCONS_00232661	ENSCAFG00000020616	ENSCAFT00000032723	sense	genic	0	containing	intronic
+0	XLOC_090892	TCONS_00232661	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	6524	convergent	downstream
+1	XLOC_090634	TCONS_00231593	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2408	divergent	upstream
+1	XLOC_090720	TCONS_00231944	ENSCAFG00000026373	ENSCAFT00000040656	sense	intergenic	66670	same_strand	upstream
+1	XLOC_090633	TCONS_00231592	ENSCAFG00000010144	ENSCAFT00000016113	antisense	intergenic	8606	divergent	upstream
+1	XLOC_090991	TCONS_00233053	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	27440	convergent	downstream
+1	XLOC_091060	TCONS_00233538	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	369	same_strand	downstream
+1	XLOC_090606	TCONS_00231441	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	overlapping	exonic
+0	XLOC_090606	TCONS_00231441	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	486	divergent	upstream
+1	XLOC_090860	TCONS_00232464	ENSCAFG00000009459	ENSCAFT00000015038	sense	intergenic	24831	same_strand	upstream
+0	XLOC_090860	TCONS_00232464	ENSCAFG00000009462	ENSCAFT00000015041	antisense	intergenic	29095	divergent	upstream
+1	XLOC_090726	TCONS_00231955	ENSCAFG00000013637	ENSCAFT00000021622	sense	intergenic	60824	same_strand	upstream
+1	XLOC_090732	TCONS_00231967	ENSCAFG00000013620	ENSCAFT00000021590	antisense	intergenic	2151	divergent	upstream
+0	XLOC_090732	TCONS_00231967	ENSCAFG00000013601	ENSCAFT00000021570	sense	intergenic	9792	same_strand	upstream
+0	XLOC_090732	TCONS_00231967	ENSCAFG00000013601	ENSCAFT00000021557	sense	intergenic	9590	same_strand	upstream
+1	XLOC_090688	TCONS_00231841	ENSCAFG00000010839	ENSCAFT00000017231	sense	intergenic	34682	same_strand	downstream
+1	XLOC_090937	TCONS_00232869	ENSCAFG00000032530	ENSCAFT00000043356	sense	intergenic	85972	same_strand	upstream
+1	XLOC_090743	TCONS_00232059	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	377	divergent	upstream
+1	XLOC_090989	TCONS_00233036	ENSCAFG00000011340	ENSCAFT00000018023	antisense	intergenic	5988	convergent	downstream
+1	XLOC_090606	TCONS_00231448	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
+0	XLOC_090606	TCONS_00231448	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
+1	XLOC_091032	TCONS_00233350	ENSCAFG00000013015	ENSCAFT00000020665	antisense	intergenic	18981	divergent	upstream
+1	XLOC_091031	TCONS_00233349	ENSCAFG00000013035	ENSCAFT00000020678	sense	intergenic	5141	same_strand	upstream
+0	XLOC_091031	TCONS_00233349	ENSCAFG00000013035	ENSCAFT00000020677	sense	intergenic	5373	same_strand	upstream
+1	XLOC_090861	TCONS_00232465	ENSCAFG00000009564	ENSCAFT00000015202	antisense	genic	0	overlapping	exonic
+1	XLOC_090892	TCONS_00232657	ENSCAFG00000020616	ENSCAFT00000032723	sense	intergenic	4060	same_strand	downstream
+0	XLOC_090892	TCONS_00232657	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	6524	convergent	downstream
+1	XLOC_090599	TCONS_00231416	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	8242	same_strand	downstream
+1	XLOC_090620	TCONS_00231538	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	exonic
 1	XLOC_090822	TCONS_00232392	ENSCAFG00000011747	ENSCAFT00000018659	sense	intergenic	10065	same_strand	downstream
-1	XLOC_090886	TCONS_00232636	ENSCAFG00000009999	ENSCAFT00000015918	sense	intergenic	184	same_strand	upstream
-0	XLOC_090886	TCONS_00232636	ENSCAFG00000028060	ENSCAFT00000042343	antisense	intergenic	1289	divergent	upstream
-0	XLOC_090886	TCONS_00232636	ENSCAFG00000010030	ENSCAFT00000015952	antisense	intergenic	8175	divergent	upstream
-1	XLOC_090606	TCONS_00231446	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
-0	XLOC_090606	TCONS_00231446	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
-1	XLOC_090970	TCONS_00232965	ENSCAFG00000021604	ENSCAFT00000033711	sense	intergenic	5524	same_strand	upstream
-1	XLOC_090608	TCONS_00231457	ENSCAFG00000028371	ENSCAFT00000042654	sense	intergenic	15808	same_strand	downstream
-1	XLOC_090707	TCONS_00231907	ENSCAFG00000011325	ENSCAFT00000018005	antisense	intergenic	6195	divergent	upstream
-0	XLOC_090707	TCONS_00231907	ENSCAFG00000031609	ENSCAFT00000047625	sense	intergenic	9383	same_strand	downstream
-1	XLOC_090964	TCONS_00232952	ENSCAFG00000026633	ENSCAFT00000040916	sense	intergenic	66675	same_strand	upstream
-1	XLOC_090742	TCONS_00232052	ENSCAFG00000013353	ENSCAFT00000037837	antisense	intergenic	16793	divergent	upstream
-0	XLOC_090742	TCONS_00232052	ENSCAFG00000013353	ENSCAFT00000021201	antisense	intergenic	16793	divergent	upstream
-1	XLOC_090685	TCONS_00231831	ENSCAFG00000026633	ENSCAFT00000040916	antisense	intergenic	90567	divergent	upstream
-1	XLOC_090878	TCONS_00232601	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_090634	TCONS_00231596	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2409	divergent	upstream
-1	XLOC_090633	TCONS_00231592	ENSCAFG00000010144	ENSCAFT00000016113	antisense	intergenic	8606	divergent	upstream
-1	XLOC_090747	TCONS_00232078	ENSCAFG00000013317	ENSCAFT00000021142	sense	intergenic	1952	same_strand	upstream
-1	XLOC_090720	TCONS_00231945	ENSCAFG00000026373	ENSCAFT00000040656	sense	intergenic	66670	same_strand	upstream
-1	XLOC_090943	TCONS_00232878	ENSCAFG00000010624	ENSCAFT00000016924	antisense	intergenic	25650	divergent	upstream
-1	XLOC_090777	TCONS_00232178	ENSCAFG00000012732	ENSCAFT00000020175	antisense	intergenic	2331	divergent	upstream
-0	XLOC_090777	TCONS_00232178	ENSCAFG00000012733	ENSCAFT00000020181	sense	intergenic	5163	same_strand	downstream
-0	XLOC_090777	TCONS_00232178	ENSCAFG00000012722	ENSCAFT00000020174	sense	intergenic	3019	same_strand	upstream
-1	XLOC_090829	TCONS_00232406	ENSCAFG00000025115	ENSCAFT00000018582	antisense	genic	0	overlapping	exonic
-0	XLOC_090829	TCONS_00232406	ENSCAFG00000025115	ENSCAFT00000018604	antisense	intergenic	9767	convergent	downstream
-1	XLOC_090744	TCONS_00232063	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	35060	same_strand	upstream
-1	XLOC_090620	TCONS_00231539	ENSCAFG00000009999	ENSCAFT00000015918	antisense	genic	0	overlapping	intronic
-1	XLOC_090746	TCONS_00232077	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	6186	same_strand	downstream
-1	XLOC_090652	TCONS_00231715	ENSCAFG00000021533	ENSCAFT00000033640	antisense	genic	0	containing	intronic
+1	XLOC_090953	TCONS_00232919	ENSCAFG00000025753	ENSCAFT00000040036	antisense	intergenic	17015	divergent	upstream
+1	XLOC_090652	TCONS_00231713	ENSCAFG00000021533	ENSCAFT00000033640	antisense	intergenic	28415	convergent	downstream
+1	XLOC_090690	TCONS_00231845	ENSCAFG00000021604	ENSCAFT00000033711	antisense	genic	0	containing	intronic
+1	XLOC_090660	TCONS_00231733	ENSCAFG00000010552	ENSCAFT00000016789	antisense	genic	0	overlapping	intronic
+0	XLOC_090660	TCONS_00231733	ENSCAFG00000010573	ENSCAFT00000016817	sense	intergenic	4547	same_strand	upstream
+1	XLOC_090827	TCONS_00232399	ENSCAFG00000025115	ENSCAFT00000018582	antisense	intergenic	8283	convergent	downstream
+1	XLOC_090974	TCONS_00232972	ENSCAFG00000010842	ENSCAFT00000017240	sense	intergenic	85066	same_strand	downstream
+1	XLOC_090974	TCONS_00232971	ENSCAFG00000010842	ENSCAFT00000017240	sense	intergenic	85066	same_strand	downstream
+1	XLOC_090634	TCONS_00231601	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	3157	divergent	upstream
+1	XLOC_090878	TCONS_00232593	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
+1	XLOC_091073	TCONS_00233580	ENSCAFG00000011857	ENSCAFT00000018829	antisense	genic	0	overlapping	exonic
+0	XLOC_091073	TCONS_00233580	ENSCAFG00000011835	ENSCAFT00000018806	antisense	intergenic	6095	divergent	upstream
+1	XLOC_090599	TCONS_00231401	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
+1	XLOC_090743	TCONS_00232053	ENSCAFG00000013346	ENSCAFT00000021186	antisense	genic	0	overlapping	intronic
+1	XLOC_090763	TCONS_00232139	ENSCAFG00000012997	ENSCAFT00000020633	sense	intergenic	43579	same_strand	upstream
+0	XLOC_090763	TCONS_00232139	ENSCAFG00000013015	ENSCAFT00000020665	sense	intergenic	49540	same_strand	downstream
+0	XLOC_090763	TCONS_00232139	ENSCAFG00000012992	ENSCAFT00000020625	antisense	intergenic	49065	convergent	downstream
+0	XLOC_090763	TCONS_00232139	ENSCAFG00000012992	ENSCAFT00000020626	antisense	intergenic	49059	convergent	downstream
+1	XLOC_091060	TCONS_00233536	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	4446	same_strand	downstream
+1	XLOC_090878	TCONS_00232599	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
+1	XLOC_090854	TCONS_00232456	ENSCAFG00000031030	ENSCAFT00000045878	antisense	genic	0	nested	exonic
+0	XLOC_090854	TCONS_00232456	ENSCAFG00000011358	ENSCAFT00000049302	antisense	intergenic	6622	convergent	downstream
+0	XLOC_090854	TCONS_00232456	ENSCAFG00000011358	ENSCAFT00000018051	antisense	intergenic	7271	convergent	downstream
+0	XLOC_090854	TCONS_00232456	ENSCAFG00000011368	ENSCAFT00000018059	sense	genic	0	nested	intronic
+1	XLOC_090849	TCONS_00232438	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	7271	divergent	upstream
+0	XLOC_090849	TCONS_00232438	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	8196	divergent	upstream
+1	XLOC_090878	TCONS_00232604	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
 1	XLOC_090802	TCONS_00232321	ENSCAFG00000012174	ENSCAFT00000019707	antisense	intergenic	692	divergent	upstream
 0	XLOC_090802	TCONS_00232321	ENSCAFG00000032332	ENSCAFT00000047817	antisense	intergenic	8255	convergent	downstream
 0	XLOC_090802	TCONS_00232321	ENSCAFG00000028933	ENSCAFT00000048290	sense	intergenic	3788	same_strand	upstream
 0	XLOC_090802	TCONS_00232321	ENSCAFG00000028933	ENSCAFT00000050050	sense	intergenic	779	same_strand	upstream
-1	XLOC_090720	TCONS_00231946	ENSCAFG00000026373	ENSCAFT00000040656	sense	intergenic	66670	same_strand	upstream
-1	XLOC_090925	TCONS_00232810	ENSCAFG00000010525	ENSCAFT00000016748	sense	intergenic	20055	same_strand	downstream
-1	XLOC_090891	TCONS_00232655	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	855	convergent	downstream
-0	XLOC_090891	TCONS_00232655	ENSCAFG00000020616	ENSCAFT00000032723	sense	intergenic	8438	same_strand	downstream
-1	XLOC_090802	TCONS_00232319	ENSCAFG00000012174	ENSCAFT00000019707	antisense	intergenic	641	divergent	upstream
-0	XLOC_090802	TCONS_00232319	ENSCAFG00000032332	ENSCAFT00000047817	antisense	intergenic	8255	convergent	downstream
-0	XLOC_090802	TCONS_00232319	ENSCAFG00000028933	ENSCAFT00000048290	sense	intergenic	3788	same_strand	upstream
-0	XLOC_090802	TCONS_00232319	ENSCAFG00000028933	ENSCAFT00000050050	sense	intergenic	779	same_strand	upstream
+1	XLOC_090744	TCONS_00232061	ENSCAFG00000013336	ENSCAFT00000021179	sense	intergenic	28636	same_strand	upstream
+1	XLOC_090785	TCONS_00232224	ENSCAFG00000012621	ENSCAFT00000020056	antisense	intergenic	7630	divergent	upstream
+1	XLOC_090892	TCONS_00232660	ENSCAFG00000020616	ENSCAFT00000032723	sense	genic	0	containing	exonic
+0	XLOC_090892	TCONS_00232660	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	6524	convergent	downstream
+1	XLOC_090886	TCONS_00232636	ENSCAFG00000009999	ENSCAFT00000015918	sense	intergenic	184	same_strand	upstream
+0	XLOC_090886	TCONS_00232636	ENSCAFG00000028060	ENSCAFT00000042343	antisense	intergenic	1289	divergent	upstream
+0	XLOC_090886	TCONS_00232636	ENSCAFG00000010030	ENSCAFT00000015952	antisense	intergenic	8175	divergent	upstream
+1	XLOC_090634	TCONS_00231602	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	9337	divergent	upstream
+1	XLOC_090802	TCONS_00232320	ENSCAFG00000012174	ENSCAFT00000019707	antisense	intergenic	692	divergent	upstream
+0	XLOC_090802	TCONS_00232320	ENSCAFG00000028933	ENSCAFT00000048290	sense	intergenic	3788	same_strand	upstream
+0	XLOC_090802	TCONS_00232320	ENSCAFG00000028933	ENSCAFT00000050050	sense	intergenic	779	same_strand	upstream
+0	XLOC_090802	TCONS_00232320	ENSCAFG00000032332	ENSCAFT00000047817	antisense	intergenic	8255	convergent	downstream
+1	XLOC_090639	TCONS_00231609	ENSCAFG00000010198	ENSCAFT00000016185	antisense	intergenic	766	convergent	downstream
+1	XLOC_090849	TCONS_00232433	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	6167	divergent	upstream
+0	XLOC_090849	TCONS_00232433	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	7092	divergent	upstream
 1	XLOC_090634	TCONS_00231595	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2409	divergent	upstream
-1	XLOC_090606	TCONS_00231452	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
-0	XLOC_090606	TCONS_00231452	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
-1	XLOC_090862	TCONS_00232466	ENSCAFG00000031149	ENSCAFT00000047341	antisense	genic	0	overlapping	exonic
-1	XLOC_090606	TCONS_00231454	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
-0	XLOC_090606	TCONS_00231454	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2210	divergent	upstream
-1	XLOC_090700	TCONS_00231870	ENSCAFG00000011125	ENSCAFT00000017715	antisense	genic	0	overlapping	exonic
-1	XLOC_090694	TCONS_00231853	ENSCAFG00000010842	ENSCAFT00000017240	antisense	genic	0	overlapping	intronic
-1	XLOC_090953	TCONS_00232919	ENSCAFG00000025753	ENSCAFT00000040036	antisense	intergenic	17015	divergent	upstream
-1	XLOC_090801	TCONS_00232317	ENSCAFG00000012174	ENSCAFT00000019707	antisense	genic	0	nested	exonic
-1	XLOC_090964	TCONS_00232953	ENSCAFG00000026633	ENSCAFT00000040916	sense	intergenic	66675	same_strand	upstream
-1	XLOC_090849	TCONS_00232434	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	6167	divergent	upstream
-0	XLOC_090849	TCONS_00232434	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	7092	divergent	upstream
-1	XLOC_090752	TCONS_00232086	ENSCAFG00000013259	ENSCAFT00000021052	antisense	intergenic	3325	divergent	upstream
-1	XLOC_090639	TCONS_00231608	ENSCAFG00000010198	ENSCAFT00000016185	antisense	genic	0	overlapping	exonic
-1	XLOC_090634	TCONS_00231600	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2414	divergent	upstream
-1	XLOC_090861	TCONS_00232465	ENSCAFG00000009564	ENSCAFT00000015202	antisense	genic	0	overlapping	exonic
-1	XLOC_090947	TCONS_00232886	ENSCAFG00000029859	ENSCAFT00000048330	sense	genic	0	containing	intronic
-0	XLOC_090947	TCONS_00232886	ENSCAFG00000002103	ENSCAFT00000013152	antisense	genic	0	containing	intronic
-0	XLOC_090947	TCONS_00232886	ENSCAFG00000028763	ENSCAFT00000050209	sense	genic	0	containing	intronic
-1	XLOC_091073	TCONS_00233579	ENSCAFG00000011857	ENSCAFT00000018829	antisense	genic	0	overlapping	exonic
-0	XLOC_091073	TCONS_00233579	ENSCAFG00000011835	ENSCAFT00000018806	antisense	intergenic	6095	divergent	upstream
-1	XLOC_090727	TCONS_00231957	ENSCAFG00000013637	ENSCAFT00000021622	sense	genic	0	containing	intronic
-1	XLOC_090915	TCONS_00232764	ENSCAFG00000029799	ENSCAFT00000046901	antisense	genic	0	overlapping	intronic
-0	XLOC_090915	TCONS_00232764	ENSCAFG00000010239	ENSCAFT00000016260	antisense	intergenic	1870	convergent	downstream
+1	XLOC_091025	TCONS_00233261	ENSCAFG00000013079	ENSCAFT00000020753	antisense	intergenic	3412	convergent	downstream
+0	XLOC_091025	TCONS_00233261	ENSCAFG00000013068	ENSCAFT00000020736	sense	intergenic	7803	same_strand	downstream
+1	XLOC_090964	TCONS_00232952	ENSCAFG00000026633	ENSCAFT00000040916	sense	intergenic	66675	same_strand	upstream
+1	XLOC_090652	TCONS_00231714	ENSCAFG00000021533	ENSCAFT00000033640	antisense	genic	0	containing	intronic
+1	XLOC_090801	TCONS_00232316	ENSCAFG00000012174	ENSCAFT00000019707	antisense	genic	0	nested	exonic
+1	XLOC_090742	TCONS_00232052	ENSCAFG00000013353	ENSCAFT00000021201	antisense	intergenic	16793	divergent	upstream
+0	XLOC_090742	TCONS_00232052	ENSCAFG00000013353	ENSCAFT00000037837	antisense	intergenic	16793	divergent	upstream
+1	XLOC_090966	TCONS_00232956	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	174	divergent	upstream
+1	XLOC_090688	TCONS_00231843	ENSCAFG00000010839	ENSCAFT00000017231	sense	intergenic	51002	same_strand	downstream
+1	XLOC_090639	TCONS_00231610	ENSCAFG00000010198	ENSCAFT00000016185	antisense	genic	0	overlapping	exonic
+1	XLOC_090966	TCONS_00232960	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	1254	divergent	upstream
+1	XLOC_090658	TCONS_00231722	ENSCAFG00000010525	ENSCAFT00000016748	antisense	intergenic	9853	divergent	upstream
+1	XLOC_090817	TCONS_00232385	ENSCAFG00000011795	ENSCAFT00000018715	antisense	genic	0	overlapping	exonic
+1	XLOC_090662	TCONS_00231753	ENSCAFG00000010595	ENSCAFT00000044512	antisense	intergenic	66882	convergent	downstream
+0	XLOC_090662	TCONS_00231753	ENSCAFG00000010595	ENSCAFT00000016835	antisense	intergenic	69592	convergent	downstream
+1	XLOC_090825	TCONS_00232395	ENSCAFG00000011731	ENSCAFT00000018655	antisense	intergenic	1539	divergent	upstream
+1	XLOC_090758	TCONS_00232114	ENSCAFG00000013086	ENSCAFT00000020761	antisense	genic	0	overlapping	intronic
+1	XLOC_091067	TCONS_00233568	ENSCAFG00000028933	ENSCAFT00000050050	antisense	intergenic	3324	divergent	upstream
+0	XLOC_091067	TCONS_00233568	ENSCAFG00000028933	ENSCAFT00000048290	antisense	intergenic	6333	divergent	upstream
+0	XLOC_091067	TCONS_00233568	ENSCAFG00000012174	ENSCAFT00000019707	sense	intergenic	7282	same_strand	upstream
+1	XLOC_090674	TCONS_00231787	ENSCAFG00000010731	ENSCAFT00000017072	antisense	genic	0	nested	intronic
+1	XLOC_091011	TCONS_00233145	ENSCAFG00000013289	ENSCAFT00000021112	sense	genic	0	nested	intronic
+0	XLOC_091011	TCONS_00233145	ENSCAFG00000013289	ENSCAFT00000044816	sense	genic	0	overlapping	intronic
 1	XLOC_090732	TCONS_00231966	ENSCAFG00000013620	ENSCAFT00000021590	antisense	intergenic	1483	divergent	upstream
 0	XLOC_090732	TCONS_00231966	ENSCAFG00000013601	ENSCAFT00000021557	sense	intergenic	9590	same_strand	upstream
 0	XLOC_090732	TCONS_00231966	ENSCAFG00000013601	ENSCAFT00000021570	sense	intergenic	9792	same_strand	upstream
-1	XLOC_090639	TCONS_00231609	ENSCAFG00000010198	ENSCAFT00000016185	antisense	intergenic	766	convergent	downstream
-1	XLOC_090634	TCONS_00231599	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2410	divergent	upstream
-1	XLOC_091032	TCONS_00233350	ENSCAFG00000013015	ENSCAFT00000020665	antisense	intergenic	18981	divergent	upstream
-1	XLOC_090937	TCONS_00232869	ENSCAFG00000032530	ENSCAFT00000043356	sense	intergenic	85972	same_strand	upstream
-1	XLOC_090878	TCONS_00232597	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_090694	TCONS_00231852	ENSCAFG00000010842	ENSCAFT00000017240	antisense	genic	0	overlapping	exonic
-1	XLOC_090599	TCONS_00231405	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090689	TCONS_00231844	ENSCAFG00000010839	ENSCAFT00000017231	sense	intergenic	59856	same_strand	downstream
-1	XLOC_090992	TCONS_00233056	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	40976	convergent	downstream
-1	XLOC_090688	TCONS_00231842	ENSCAFG00000010839	ENSCAFT00000017231	sense	intergenic	51002	same_strand	downstream
-1	XLOC_090664	TCONS_00231756	ENSCAFG00000010603	ENSCAFT00000016853	antisense	intergenic	77031	divergent	upstream
-1	XLOC_091071	TCONS_00233577	ENSCAFG00000011865	ENSCAFT00000018843	antisense	genic	0	overlapping	exonic
-0	XLOC_091071	TCONS_00233577	ENSCAFG00000029844	ENSCAFT00000047126	antisense	intergenic	7805	convergent	downstream
-1	XLOC_090966	TCONS_00232955	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	174	divergent	upstream
-1	XLOC_090827	TCONS_00232402	ENSCAFG00000025115	ENSCAFT00000018582	antisense	intergenic	8283	convergent	downstream
-1	XLOC_090743	TCONS_00232056	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	377	divergent	upstream
+1	XLOC_090796	TCONS_00232278	ENSCAFG00000012557	ENSCAFT00000019943	antisense	intergenic	1787	convergent	downstream
+0	XLOC_090796	TCONS_00232278	ENSCAFG00000023513	ENSCAFT00000036175	antisense	intergenic	4482	divergent	upstream
+1	XLOC_090878	TCONS_00232596	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
+1	XLOC_090964	TCONS_00232953	ENSCAFG00000026633	ENSCAFT00000040916	sense	intergenic	66675	same_strand	upstream
+1	XLOC_090788	TCONS_00232240	ENSCAFG00000012579	ENSCAFT00000019982	sense	intergenic	1068	same_strand	downstream
+1	XLOC_090691	TCONS_00231848	ENSCAFG00000021604	ENSCAFT00000033711	antisense	intergenic	39885	divergent	upstream
+1	XLOC_090599	TCONS_00231404	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
+1	XLOC_090747	TCONS_00232078	ENSCAFG00000013317	ENSCAFT00000021142	sense	intergenic	1952	same_strand	upstream
+1	XLOC_090985	TCONS_00233030	ENSCAFG00000011166	ENSCAFT00000017746	sense	intergenic	10280	same_strand	downstream
 1	XLOC_090675	TCONS_00231788	ENSCAFG00000010731	ENSCAFT00000017072	antisense	genic	0	nested	exonic
-1	XLOC_090743	TCONS_00232059	ENSCAFG00000013346	ENSCAFT00000021186	antisense	intergenic	377	divergent	upstream
-1	XLOC_091032	TCONS_00233351	ENSCAFG00000013015	ENSCAFT00000020665	antisense	intergenic	15339	divergent	upstream
-1	XLOC_090599	TCONS_00231411	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090849	TCONS_00232435	ENSCAFG00000030554	ENSCAFT00000018156	antisense	intergenic	6167	divergent	upstream
-0	XLOC_090849	TCONS_00232435	ENSCAFG00000030554	ENSCAFT00000018170	antisense	intergenic	7092	divergent	upstream
-1	XLOC_091058	TCONS_00233514	ENSCAFG00000012566	ENSCAFT00000019952	sense	intergenic	15062	same_strand	downstream
-1	XLOC_090634	TCONS_00231593	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2408	divergent	upstream
-1	XLOC_090802	TCONS_00232322	ENSCAFG00000028933	ENSCAFT00000050050	sense	intergenic	779	same_strand	upstream
-0	XLOC_090802	TCONS_00232322	ENSCAFG00000012174	ENSCAFT00000019707	antisense	intergenic	3732	divergent	upstream
-0	XLOC_090802	TCONS_00232322	ENSCAFG00000032332	ENSCAFT00000047817	antisense	intergenic	8255	convergent	downstream
-0	XLOC_090802	TCONS_00232322	ENSCAFG00000028933	ENSCAFT00000048290	sense	intergenic	3788	same_strand	upstream
-1	XLOC_090968	TCONS_00232961	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	11872	convergent	downstream
-1	XLOC_090720	TCONS_00231943	ENSCAFG00000026373	ENSCAFT00000040656	sense	intergenic	66670	same_strand	upstream
-1	XLOC_090795	TCONS_00232276	ENSCAFG00000012566	ENSCAFT00000019952	antisense	intergenic	24437	convergent	downstream
-0	XLOC_090795	TCONS_00232276	ENSCAFG00000023704	ENSCAFT00000036617	sense	intergenic	26617	same_strand	downstream
-1	XLOC_090892	TCONS_00232658	ENSCAFG00000020616	ENSCAFT00000032723	sense	intergenic	3555	same_strand	downstream
-0	XLOC_090892	TCONS_00232658	ENSCAFG00000010051	ENSCAFT00000015981	antisense	intergenic	6524	convergent	downstream
-1	XLOC_090878	TCONS_00232604	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_090720	TCONS_00231947	ENSCAFG00000026373	ENSCAFT00000040656	sense	intergenic	66670	same_strand	upstream
-1	XLOC_091060	TCONS_00233540	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	369	same_strand	downstream
-1	XLOC_090966	TCONS_00232960	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	1254	divergent	upstream
-1	XLOC_090606	TCONS_00231445	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
-0	XLOC_090606	TCONS_00231445	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
-1	XLOC_091067	TCONS_00233569	ENSCAFG00000028933	ENSCAFT00000050050	antisense	intergenic	3304	divergent	upstream
-0	XLOC_091067	TCONS_00233569	ENSCAFG00000012174	ENSCAFT00000019707	sense	intergenic	7282	same_strand	upstream
-0	XLOC_091067	TCONS_00233569	ENSCAFG00000028933	ENSCAFT00000048290	antisense	intergenic	6313	divergent	upstream
-1	XLOC_090827	TCONS_00232400	ENSCAFG00000025115	ENSCAFT00000018582	antisense	intergenic	8283	convergent	downstream
-1	XLOC_090639	TCONS_00231607	ENSCAFG00000010198	ENSCAFT00000016185	antisense	genic	0	overlapping	exonic
-1	XLOC_090633	TCONS_00231588	ENSCAFG00000010144	ENSCAFT00000016113	antisense	intergenic	8054	divergent	upstream
-1	XLOC_090878	TCONS_00232603	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_091013	TCONS_00233149	ENSCAFG00000013259	ENSCAFT00000021052	sense	intergenic	55054	same_strand	downstream
-1	XLOC_090785	TCONS_00232221	ENSCAFG00000012621	ENSCAFT00000020056	antisense	intergenic	5831	divergent	upstream
-1	XLOC_090953	TCONS_00232920	ENSCAFG00000025753	ENSCAFT00000040036	antisense	genic	0	containing	intronic
-1	XLOC_090966	TCONS_00232957	ENSCAFG00000010839	ENSCAFT00000017231	antisense	intergenic	174	divergent	upstream
+1	XLOC_090608	TCONS_00231457	ENSCAFG00000028371	ENSCAFT00000042654	sense	intergenic	15808	same_strand	downstream
+1	XLOC_090943	TCONS_00232881	ENSCAFG00000010624	ENSCAFT00000016924	antisense	intergenic	22770	divergent	upstream
+1	XLOC_090738	TCONS_00232020	ENSCAFG00000013491	ENSCAFT00000021392	sense	intergenic	6860	same_strand	downstream
+1	XLOC_090599	TCONS_00231413	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
+1	XLOC_090961	TCONS_00232949	ENSCAFG00000010835	ENSCAFT00000017226	antisense	intergenic	226	divergent	upstream
+1	XLOC_091060	TCONS_00233539	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	369	same_strand	downstream
+1	XLOC_090615	TCONS_00231491	ENSCAFG00000009901	ENSCAFT00000046245	sense	intergenic	44590	same_strand	upstream
 1	XLOC_090796	TCONS_00232279	ENSCAFG00000012557	ENSCAFT00000019943	antisense	intergenic	1787	convergent	downstream
 0	XLOC_090796	TCONS_00232279	ENSCAFG00000023513	ENSCAFT00000036175	antisense	intergenic	7343	divergent	upstream
-1	XLOC_090992	TCONS_00233055	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	40976	convergent	downstream
-1	XLOC_090737	TCONS_00232010	ENSCAFG00000013502	ENSCAFT00000021419	antisense	genic	0	nested	exonic
-1	XLOC_091073	TCONS_00233580	ENSCAFG00000011857	ENSCAFT00000018829	antisense	genic	0	overlapping	exonic
-0	XLOC_091073	TCONS_00233580	ENSCAFG00000011835	ENSCAFT00000018806	antisense	intergenic	6095	divergent	upstream
-1	XLOC_091111	TCONS_00233707	ENSCAFG00000030554	ENSCAFT00000018156	sense	intergenic	3652	same_strand	upstream
-0	XLOC_091111	TCONS_00233707	ENSCAFG00000030554	ENSCAFT00000018170	sense	intergenic	4577	same_strand	upstream
-1	XLOC_090937	TCONS_00232868	ENSCAFG00000032530	ENSCAFT00000043356	sense	intergenic	23510	same_strand	upstream
-1	XLOC_090675	TCONS_00231790	ENSCAFG00000010731	ENSCAFT00000017072	antisense	genic	0	nested	exonic
-1	XLOC_090989	TCONS_00233037	ENSCAFG00000011340	ENSCAFT00000018023	antisense	intergenic	5988	convergent	downstream
-1	XLOC_090947	TCONS_00232887	ENSCAFG00000029859	ENSCAFT00000048330	sense	genic	0	containing	intronic
-0	XLOC_090947	TCONS_00232887	ENSCAFG00000028763	ENSCAFT00000050209	sense	genic	0	containing	intronic
-0	XLOC_090947	TCONS_00232887	ENSCAFG00000002103	ENSCAFT00000013152	antisense	genic	0	containing	intronic
-1	XLOC_090991	TCONS_00233053	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	27440	convergent	downstream
-1	XLOC_090628	TCONS_00231553	ENSCAFG00000025208	ENSCAFT00000039078	antisense	intergenic	1622	divergent	upstream
-0	XLOC_090628	TCONS_00231553	ENSCAFG00000010051	ENSCAFT00000015981	sense	intergenic	4505	same_strand	upstream
-1	XLOC_090991	TCONS_00233054	ENSCAFG00000013637	ENSCAFT00000021622	antisense	intergenic	27440	convergent	downstream
-1	XLOC_090599	TCONS_00231404	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090599	TCONS_00231408	ENSCAFG00000009602	ENSCAFT00000049169	sense	intergenic	7295	same_strand	downstream
-1	XLOC_090627	TCONS_00231552	ENSCAFG00000010038	ENSCAFT00000015965	antisense	intergenic	1824	convergent	downstream
-1	XLOC_090974	TCONS_00232974	ENSCAFG00000010842	ENSCAFT00000017240	sense	intergenic	44952	same_strand	downstream
-1	XLOC_090878	TCONS_00232598	ENSCAFG00000009675	ENSCAFT00000015370	sense	intergenic	19181	same_strand	upstream
-1	XLOC_090802	TCONS_00232320	ENSCAFG00000012174	ENSCAFT00000019707	antisense	intergenic	692	divergent	upstream
-0	XLOC_090802	TCONS_00232320	ENSCAFG00000028933	ENSCAFT00000048290	sense	intergenic	3788	same_strand	upstream
-0	XLOC_090802	TCONS_00232320	ENSCAFG00000032332	ENSCAFT00000047817	antisense	intergenic	8255	convergent	downstream
-0	XLOC_090802	TCONS_00232320	ENSCAFG00000028933	ENSCAFT00000050050	sense	intergenic	779	same_strand	upstream
-1	XLOC_090675	TCONS_00231789	ENSCAFG00000010731	ENSCAFT00000017072	antisense	genic	0	nested	exonic
-1	XLOC_090652	TCONS_00231714	ENSCAFG00000021533	ENSCAFT00000033640	antisense	genic	0	containing	intronic
-1	XLOC_090690	TCONS_00231846	ENSCAFG00000021604	ENSCAFT00000033711	antisense	genic	0	containing	intronic
-1	XLOC_090606	TCONS_00231448	ENSCAFG00000009623	ENSCAFT00000015286	antisense	genic	0	nested	exonic
-0	XLOC_090606	TCONS_00231448	ENSCAFG00000009619	ENSCAFT00000015284	antisense	intergenic	2139	divergent	upstream
-1	XLOC_090700	TCONS_00231871	ENSCAFG00000011125	ENSCAFT00000017715	antisense	genic	0	overlapping	exonic
-1	XLOC_090707	TCONS_00231909	ENSCAFG00000011325	ENSCAFT00000018005	antisense	intergenic	6195	divergent	upstream
-0	XLOC_090707	TCONS_00231909	ENSCAFG00000031609	ENSCAFT00000047625	sense	intergenic	9383	same_strand	downstream
-1	XLOC_091056	TCONS_00233512	ENSCAFG00000023704	ENSCAFT00000036617	antisense	genic	0	overlapping	exonic
-1	XLOC_090634	TCONS_00231602	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	9337	divergent	upstream
-1	XLOC_091009	TCONS_00233127	ENSCAFG00000013336	ENSCAFT00000021179	antisense	intergenic	6186	convergent	downstream
-1	XLOC_091058	TCONS_00233516	ENSCAFG00000012566	ENSCAFT00000019952	sense	intergenic	14665	same_strand	downstream
+1	XLOC_091027	TCONS_00233310	ENSCAFG00000032051	ENSCAFT00000036830	sense	intergenic	8387	same_strand	downstream
+0	XLOC_091027	TCONS_00233310	ENSCAFG00000013058	ENSCAFT00000020714	sense	intergenic	9113	same_strand	upstream
+1	XLOC_090634	TCONS_00231599	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2410	divergent	upstream
+1	XLOC_091062	TCONS_00233543	ENSCAFG00000012557	ENSCAFT00000019943	sense	intergenic	2148	same_strand	downstream
+0	XLOC_091062	TCONS_00233543	ENSCAFG00000023513	ENSCAFT00000036175	sense	intergenic	5770	same_strand	upstream
+1	XLOC_090634	TCONS_00231598	ENSCAFG00000010148	ENSCAFT00000016118	antisense	intergenic	2410	divergent	upstream
--- a/test-data/candidate_lncRNA.gtf.lncRNA-sort.gtf	Wed Apr 25 15:55:19 2018 -0400
+++ b/test-data/candidate_lncRNA.gtf.lncRNA-sort.gtf	Wed Dec 18 15:24:23 2019 -0500
@@ -1,816 +1,589 @@
-38	Cufflinks	exon	10413424	10413839	.	+	.	gene_id "XLOC_090671"; transcript_id "TCONS_00231772"; class_code "u"; exon_number "1"; oId "CUFF.138718.1"; tss_id "TSS139647";
-38	Cufflinks	exon	10413938	10414557	.	+	.	gene_id "XLOC_090671"; transcript_id "TCONS_00231773"; class_code "u"; exon_number "1"; oId "CUFF.138718.2"; tss_id "TSS139648";
-38	Cufflinks	exon	10414466	10414557	.	+	.	gene_id "XLOC_090671"; transcript_id "TCONS_00231772"; class_code "u"; exon_number "2"; oId "CUFF.138718.1"; tss_id "TSS139647";
-38	Cufflinks	exon	10443102	10444725	.	+	.	gene_id "XLOC_090671"; transcript_id "TCONS_00231772"; class_code "u"; exon_number "3"; oId "CUFF.138718.1"; tss_id "TSS139647";
-38	Cufflinks	exon	10443102	10444725	.	+	.	gene_id "XLOC_090671"; transcript_id "TCONS_00231773"; class_code "u"; exon_number "2"; oId "CUFF.138718.2"; tss_id "TSS139648";
-38	Cufflinks	exon	10646531	10646561	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232893"; class_code "u"; exon_number "1"; oId "CUFF.138746.1"; tss_id "TSS140242";
-38	Cufflinks	exon	10661011	10663355	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232894"; class_code "u"; exon_number "1"; oId "CUFF.138746.2"; tss_id "TSS140242";
-38	Cufflinks	exon	10663297	10663355	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232893"; class_code "u"; exon_number "2"; oId "CUFF.138746.1"; tss_id "TSS140242";
-38	Cufflinks	exon	10664410	10664532	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232893"; class_code "u"; exon_number "3"; oId "CUFF.138746.1"; tss_id "TSS140242";
-38	Cufflinks	exon	10664410	10664532	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232894"; class_code "u"; exon_number "2"; oId "CUFF.138746.2"; tss_id "TSS140242";
-38	Cufflinks	exon	10665521	10665896	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232893"; class_code "u"; exon_number "4"; oId "CUFF.138746.1"; tss_id "TSS140242";
-38	Cufflinks	exon	10665521	10665896	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232894"; class_code "u"; exon_number "3"; oId "CUFF.138746.2"; tss_id "TSS140242";
+38	Cufflinks	exon	2092529	2092638	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231592"; class_code "u"; exon_number "1"; oId "CUFF.137741.5"; tss_id "TSS139553";
+38	Cufflinks	exon	2093797	2094320	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231592"; class_code "u"; exon_number "2"; oId "CUFF.137741.5"; tss_id "TSS139553";
+38	Cufflinks	exon	4471226	4471326	.	+	.	gene_id "XLOC_090654"; transcript_id "TCONS_00231717"; class_code "u"; exon_number "1"; oId "CUFF.137882.1"; tss_id "TSS139611";
+38	Cufflinks	exon	4471424	4471526	.	+	.	gene_id "XLOC_090654"; transcript_id "TCONS_00231717"; class_code "u"; exon_number "2"; oId "CUFF.137882.1"; tss_id "TSS139611";
+38	Cufflinks	exon	4472769	4473606	.	+	.	gene_id "XLOC_090654"; transcript_id "TCONS_00231717"; class_code "u"; exon_number "3"; oId "CUFF.137882.1"; tss_id "TSS139611";
+38	Cufflinks	exon	14681653	14681831	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231853"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.2"; tss_id "TSS139692";
+38	Cufflinks	exon	14691519	14691664	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231853"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.2"; tss_id "TSS139692";
+38	Cufflinks	exon	14701961	14702043	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231853"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.2"; tss_id "TSS139692";
+38	Cufflinks	exon	14711884	14712071	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231853"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.2"; tss_id "TSS139692";
+38	Cufflinks	exon	14713462	14714407	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231853"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.2"; tss_id "TSS139692";
+38	Cufflinks	exon	19507549	19508594	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233148"; class_code "u"; exon_number "1"; oId "CUFF.139379.2"; tss_id "TSS140388";
+38	Cufflinks	exon	19509838	19509927	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233148"; class_code "u"; exon_number "2"; oId "CUFF.139379.2"; tss_id "TSS140388";
+38	Cufflinks	exon	19518322	19518360	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233148"; class_code "u"; exon_number "3"; oId "CUFF.139379.2"; tss_id "TSS140388";
+38	Cufflinks	exon	742766	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
+38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
+38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
+38	Cufflinks	exon	744578	745140	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
+38	Cufflinks	exon	745385	746943	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
+38	Cufflinks	exon	750003	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
+38	Cufflinks	exon	750260	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
+38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
+38	Cufflinks	exon	23500593	23505172	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232437"; class_code "u"; exon_number "1"; oId "CUFF.139777.5"; tss_id "TSS140006";
+38	Cufflinks	exon	23505320	23506616	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232437"; class_code "u"; exon_number "2"; oId "CUFF.139777.5"; tss_id "TSS140006";
+38	Cufflinks	exon	23506789	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232437"; class_code "u"; exon_number "3"; oId "CUFF.139777.5"; tss_id "TSS140006";
+38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232401"; class_code "u"; exon_number "1"; oId "CUFF.139985.4"; tss_id "TSS139981";
+38	Cufflinks	exon	22859878	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232401"; class_code "u"; exon_number "2"; oId "CUFF.139985.4"; tss_id "TSS139981";
+38	Cufflinks	exon	22862511	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232401"; class_code "u"; exon_number "3"; oId "CUFF.139985.4"; tss_id "TSS139981";
+38	Cufflinks	exon	17918227	17918903	.	-	.	gene_id "XLOC_091009"; transcript_id "TCONS_00233127"; class_code "u"; exon_number "1"; oId "CUFF.139113.1"; tss_id "TSS140378";
+38	Cufflinks	exon	17919100	17919183	.	-	.	gene_id "XLOC_091009"; transcript_id "TCONS_00233127"; class_code "u"; exon_number "2"; oId "CUFF.139113.1"; tss_id "TSS140378";
+38	Cufflinks	exon	19604003	19604983	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232087"; class_code "u"; exon_number "1"; oId "CUFF.139381.3"; tss_id "TSS139807";
+38	Cufflinks	exon	19605120	19606194	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232087"; class_code "u"; exon_number "2"; oId "CUFF.139381.3"; tss_id "TSS139807";
+38	Cufflinks	exon	19606357	19609707	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232087"; class_code "u"; exon_number "3"; oId "CUFF.139381.3"; tss_id "TSS139807";
+38	Cufflinks	exon	742766	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
+38	Cufflinks	exon	743748	743891	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
+38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
+38	Cufflinks	exon	744581	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
+38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
+38	Cufflinks	exon	750936	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
+38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
+38	Cufflinks	exon	17776393	17776462	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "1"; oId "CUFF.139126.7"; tss_id "TSS139789";
+38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "2"; oId "CUFF.139126.7"; tss_id "TSS139789";
+38	Cufflinks	exon	17781481	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "3"; oId "CUFF.139126.7"; tss_id "TSS139789";
+38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "4"; oId "CUFF.139126.7"; tss_id "TSS139789";
+38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "5"; oId "CUFF.139126.7"; tss_id "TSS139789";
+38	Cufflinks	exon	17798695	17798844	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "6"; oId "CUFF.139126.7"; tss_id "TSS139789";
+38	Cufflinks	exon	17807870	17808287	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "7"; oId "CUFF.139126.7"; tss_id "TSS139789";
+38	Cufflinks	exon	742837	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
+38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
+38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
+38	Cufflinks	exon	744578	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
+38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
+38	Cufflinks	exon	750936	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
+38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
+38	Cufflinks	exon	16858582	16858767	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231964"; class_code "u"; exon_number "1"; oId "CUFF.139121.1"; tss_id "TSS139749";
+38	Cufflinks	exon	16859936	16860441	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231964"; class_code "u"; exon_number "2"; oId "CUFF.139121.1"; tss_id "TSS139749";
+38	Cufflinks	exon	16866188	16870239	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231964"; class_code "u"; exon_number "3"; oId "CUFF.139121.1"; tss_id "TSS139749";
+38	Cufflinks	exon	8177029	8178688	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232879"; class_code "u"; exon_number "1"; oId "CUFF.139147.3"; tss_id "TSS140231";
+38	Cufflinks	exon	8179884	8179942	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232879"; class_code "u"; exon_number "2"; oId "CUFF.139147.3"; tss_id "TSS140231";
+38	Cufflinks	exon	8180418	8180797	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232879"; class_code "u"; exon_number "3"; oId "CUFF.139147.3"; tss_id "TSS140231";
+38	Cufflinks	exon	17818488	17818896	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232064"; class_code "u"; exon_number "1"; oId "CUFF.139119.5"; tss_id "TSS139793";
+38	Cufflinks	exon	17823682	17823764	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232064"; class_code "u"; exon_number "2"; oId "CUFF.139119.5"; tss_id "TSS139793";
+38	Cufflinks	exon	17824159	17824254	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232064"; class_code "u"; exon_number "3"; oId "CUFF.139119.5"; tss_id "TSS139793";
+38	Cufflinks	exon	17835710	17835864	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232064"; class_code "u"; exon_number "4"; oId "CUFF.139119.5"; tss_id "TSS139793";
+38	Cufflinks	exon	17836304	17838299	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232064"; class_code "u"; exon_number "5"; oId "CUFF.139119.5"; tss_id "TSS139793";
+38	Cufflinks	exon	14497116	14497243	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232968"; class_code "u"; exon_number "1"; oId "CUFF.138859.2"; tss_id "TSS140291";
+38	Cufflinks	exon	14523972	14524380	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232968"; class_code "u"; exon_number "2"; oId "CUFF.138859.2"; tss_id "TSS140291";
+38	Cufflinks	exon	2329878	2329929	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231610"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.4"; tss_id "TSS139562";
+38	Cufflinks	exon	2334571	2334824	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231610"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.4"; tss_id "TSS139562";
+38	Cufflinks	exon	2340139	2340270	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231610"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.4"; tss_id "TSS139562";
+38	Cufflinks	exon	2340736	2342639	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231610"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.4"; tss_id "TSS139562";
+38	Cufflinks	exon	14188197	14188432	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231842"; class_code "u"; exon_number "1"; oId "CUFF.138853.2"; tss_id "TSS139683";
+38	Cufflinks	exon	14188862	14188941	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231842"; class_code "u"; exon_number "2"; oId "CUFF.138853.2"; tss_id "TSS139683";
+38	Cufflinks	exon	14191749	14193112	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231842"; class_code "u"; exon_number "3"; oId "CUFF.138853.2"; tss_id "TSS139683";
+38	Cufflinks	exon	360123	362409	.	-	.	gene_id "XLOC_090861"; transcript_id "TCONS_00232465"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009564"; nearest_ref "ENSCAFT00000015202"; oId "CUFF.137951.1"; tss_id "TSS140023";
+38	Cufflinks	exon	362621	362739	.	-	.	gene_id "XLOC_090861"; transcript_id "TCONS_00232465"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009564"; nearest_ref "ENSCAFT00000015202"; oId "CUFF.137951.1"; tss_id "TSS140023";
+38	Cufflinks	exon	364585	364674	.	-	.	gene_id "XLOC_090861"; transcript_id "TCONS_00232465"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009564"; nearest_ref "ENSCAFT00000015202"; oId "CUFF.137951.1"; tss_id "TSS140023";
+38	Cufflinks	exon	366582	367324	.	-	.	gene_id "XLOC_090861"; transcript_id "TCONS_00232465"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009564"; nearest_ref "ENSCAFT00000015202"; oId "CUFF.137951.1"; tss_id "TSS140023";
+38	Cufflinks	exon	13775829	13775860	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "1"; oId "CUFF.138970.2"; tss_id "TSS140280";
+38	Cufflinks	exon	13819972	13820072	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "2"; oId "CUFF.138970.2"; tss_id "TSS140280";
+38	Cufflinks	exon	13843886	13844017	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "3"; oId "CUFF.138970.2"; tss_id "TSS140280";
+38	Cufflinks	exon	14050396	14050465	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "4"; oId "CUFF.138970.2"; tss_id "TSS140280";
+38	Cufflinks	exon	14077181	14077299	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "5"; oId "CUFF.138970.2"; tss_id "TSS140280";
+38	Cufflinks	exon	14098539	14098634	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "6"; oId "CUFF.138970.2"; tss_id "TSS140280";
+38	Cufflinks	exon	14100364	14100524	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "7"; oId "CUFF.138970.2"; tss_id "TSS140280";
+38	Cufflinks	exon	15025680	15026170	.	+	.	gene_id "XLOC_090700"; transcript_id "TCONS_00231871"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011125"; nearest_ref "ENSCAFT00000017715"; oId "CUFF.139355.1"; tss_id "TSS139700";
+38	Cufflinks	exon	15038322	15038399	.	+	.	gene_id "XLOC_090700"; transcript_id "TCONS_00231871"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011125"; nearest_ref "ENSCAFT00000017715"; oId "CUFF.139355.1"; tss_id "TSS139700";
+38	Cufflinks	exon	21859927	21862860	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233537"; class_code "u"; exon_number "1"; oId "CUFF.139665.4"; tss_id "TSS140541";
+38	Cufflinks	exon	21863481	21863554	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233537"; class_code "u"; exon_number "2"; oId "CUFF.139665.4"; tss_id "TSS140541";
+38	Cufflinks	exon	14620552	14621960	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232975"; class_code "u"; exon_number "1"; oId "CUFF.138906.5"; tss_id "TSS140295";
+38	Cufflinks	exon	14622096	14624208	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232975"; class_code "u"; exon_number "2"; oId "CUFF.138906.5"; tss_id "TSS140295";
+38	Cufflinks	exon	14625580	14625754	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232975"; class_code "u"; exon_number "3"; oId "CUFF.138906.5"; tss_id "TSS140295";
+38	Cufflinks	exon	14658326	14658545	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232975"; class_code "u"; exon_number "4"; oId "CUFF.138906.5"; tss_id "TSS140295";
+38	Cufflinks	exon	14664997	14665265	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232975"; class_code "u"; exon_number "5"; oId "CUFF.138906.5"; tss_id "TSS140295";
+38	Cufflinks	exon	17815543	17816012	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "1"; oId "CUFF.139119.3"; tss_id "TSS139791";
+38	Cufflinks	exon	17823682	17823764	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "2"; oId "CUFF.139119.3"; tss_id "TSS139791";
+38	Cufflinks	exon	17824159	17824254	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "3"; oId "CUFF.139119.3"; tss_id "TSS139791";
+38	Cufflinks	exon	17835710	17835864	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "4"; oId "CUFF.139119.3"; tss_id "TSS139791";
+38	Cufflinks	exon	17836304	17836795	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "5"; oId "CUFF.139119.3"; tss_id "TSS139791";
+38	Cufflinks	exon	17837528	17838299	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "6"; oId "CUFF.139119.3"; tss_id "TSS139791";
+38	Cufflinks	exon	1659097	1659115	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231540"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.7"; tss_id "TSS139525";
+38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231540"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.7"; tss_id "TSS139525";
+38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231540"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.7"; tss_id "TSS139525";
+38	Cufflinks	exon	1702405	1702725	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231540"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.7"; tss_id "TSS139525";
+38	Cufflinks	exon	4590988	4591031	.	+	.	gene_id "XLOC_090655"; transcript_id "TCONS_00231718"; class_code "u"; exon_number "1"; oId "CUFF.137911.1"; tss_id "TSS139612";
+38	Cufflinks	exon	4600006	4600514	.	+	.	gene_id "XLOC_090655"; transcript_id "TCONS_00231718"; class_code "u"; exon_number "2"; oId "CUFF.137911.1"; tss_id "TSS139612";
+38	Cufflinks	exon	5563191	5563525	.	-	.	gene_id "XLOC_090922"; transcript_id "TCONS_00232806"; class_code "u"; exon_number "1"; oId "CUFF.138215.1"; tss_id "TSS140190";
+38	Cufflinks	exon	5602780	5602906	.	-	.	gene_id "XLOC_090922"; transcript_id "TCONS_00232806"; class_code "u"; exon_number "2"; oId "CUFF.138215.1"; tss_id "TSS140190";
+38	Cufflinks	exon	5604292	5604429	.	-	.	gene_id "XLOC_090922"; transcript_id "TCONS_00232806"; class_code "u"; exon_number "3"; oId "CUFF.138215.1"; tss_id "TSS140190";
+38	Cufflinks	exon	17918227	17918922	.	+	.	gene_id "XLOC_090746"; transcript_id "TCONS_00232077"; class_code "u"; exon_number "1"; oId "CUFF.139112.1"; tss_id "TSS139799";
+38	Cufflinks	exon	17919836	17920054	.	+	.	gene_id "XLOC_090746"; transcript_id "TCONS_00232077"; class_code "u"; exon_number "2"; oId "CUFF.139112.1"; tss_id "TSS139799";
+38	Cufflinks	exon	515156	515948	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231404"; class_code "u"; exon_number "1"; oId "CUFF.138034.13"; tss_id "TSS139475";
+38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231404"; class_code "u"; exon_number "2"; oId "CUFF.138034.13"; tss_id "TSS139475";
+38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231404"; class_code "u"; exon_number "3"; oId "CUFF.138034.13"; tss_id "TSS139475";
+38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231404"; class_code "u"; exon_number "4"; oId "CUFF.138034.13"; tss_id "TSS139475";
+38	Cufflinks	exon	22542365	22542439	.	+	.	gene_id "XLOC_090822"; transcript_id "TCONS_00232391"; class_code "u"; exon_number "1"; oId "CUFF.139729.1"; tss_id "TSS139975";
+38	Cufflinks	exon	22554683	22555006	.	+	.	gene_id "XLOC_090822"; transcript_id "TCONS_00232391"; class_code "u"; exon_number "2"; oId "CUFF.139729.1"; tss_id "TSS139975";
+38	Cufflinks	exon	6767022	6767144	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "1"; oId "CUFF.138464.2"; tss_id "TSS140222";
+38	Cufflinks	exon	6792300	6792351	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "2"; oId "CUFF.138464.2"; tss_id "TSS140222";
+38	Cufflinks	exon	6797929	6798143	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "3"; oId "CUFF.138464.2"; tss_id "TSS140222";
+38	Cufflinks	exon	6825061	6825159	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "4"; oId "CUFF.138464.2"; tss_id "TSS140222";
+38	Cufflinks	exon	6891548	6891649	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "5"; oId "CUFF.138464.2"; tss_id "TSS140222";
+38	Cufflinks	exon	6894487	6895011	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "6"; oId "CUFF.138464.2"; tss_id "TSS140222";
+38	Cufflinks	exon	9471671	9471911	.	+	.	gene_id "XLOC_090669"; transcript_id "TCONS_00231770"; class_code "u"; exon_number "1"; oId "CUFF.138683.2"; tss_id "TSS139645";
+38	Cufflinks	exon	9485243	9485502	.	+	.	gene_id "XLOC_090669"; transcript_id "TCONS_00231770"; class_code "u"; exon_number "2"; oId "CUFF.138683.2"; tss_id "TSS139645";
+38	Cufflinks	exon	2129924	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231600"; class_code "u"; exon_number "1"; oId "CUFF.137733.8"; tss_id "TSS139554";
+38	Cufflinks	exon	2130311	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231600"; class_code "u"; exon_number "2"; oId "CUFF.137733.8"; tss_id "TSS139554";
+38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231600"; class_code "u"; exon_number "3"; oId "CUFF.137733.8"; tss_id "TSS139554";
+38	Cufflinks	exon	2132429	2133072	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231600"; class_code "u"; exon_number "4"; oId "CUFF.137733.8"; tss_id "TSS139554";
+38	Cufflinks	exon	1185983	1186688	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "1"; oId "CUFF.137647.18"; tss_id "TSS140087";
+38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "2"; oId "CUFF.137647.18"; tss_id "TSS140087";
+38	Cufflinks	exon	1187119	1187262	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "3"; oId "CUFF.137647.18"; tss_id "TSS140087";
+38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "4"; oId "CUFF.137647.18"; tss_id "TSS140087";
+38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "5"; oId "CUFF.137647.18"; tss_id "TSS140087";
+38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "6"; oId "CUFF.137647.18"; tss_id "TSS140087";
+38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "7"; oId "CUFF.137647.18"; tss_id "TSS140087";
+38	Cufflinks	exon	3646503	3646667	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
+38	Cufflinks	exon	3651620	3651701	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
+38	Cufflinks	exon	3673515	3673570	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
+38	Cufflinks	exon	3690709	3690831	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
+38	Cufflinks	exon	3708054	3708140	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
+38	Cufflinks	exon	3712003	3712298	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
+38	Cufflinks	exon	741271	741350	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
+38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
+38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
+38	Cufflinks	exon	744581	746943	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
+38	Cufflinks	exon	750023	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
+38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
+38	Cufflinks	exon	750936	751381	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
+38	Cufflinks	exon	751770	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
+38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
+38	Cufflinks	exon	742766	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
+38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
+38	Cufflinks	exon	744581	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
+38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
+38	Cufflinks	exon	750936	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
+38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
+38	Cufflinks	exon	21800610	21805531	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233516"; class_code "u"; exon_number "1"; oId "CUFF.139655.2"; tss_id "TSS140527";
+38	Cufflinks	exon	21806053	21806086	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233516"; class_code "u"; exon_number "2"; oId "CUFF.139655.2"; tss_id "TSS140527";
+38	Cufflinks	exon	2363642	2364055	.	+	.	gene_id "XLOC_090640"; transcript_id "TCONS_00231611"; class_code "u"; exon_number "1"; oId "CUFF.137755.1"; tss_id "TSS139563";
+38	Cufflinks	exon	2366782	2367159	.	+	.	gene_id "XLOC_090640"; transcript_id "TCONS_00231611"; class_code "u"; exon_number "2"; oId "CUFF.137755.1"; tss_id "TSS139563";
+38	Cufflinks	exon	2091977	2092500	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231588"; class_code "u"; exon_number "1"; oId "CUFF.137741.1"; tss_id "TSS139552";
+38	Cufflinks	exon	2093797	2094320	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231588"; class_code "u"; exon_number "2"; oId "CUFF.137741.1"; tss_id "TSS139552";
+38	Cufflinks	exon	516103	516387	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231417"; class_code "u"; exon_number "1"; oId "CUFF.138034.17"; tss_id "TSS139476";
+38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231417"; class_code "u"; exon_number "2"; oId "CUFF.138034.17"; tss_id "TSS139476";
+38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231417"; class_code "u"; exon_number "3"; oId "CUFF.138034.17"; tss_id "TSS139476";
+38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231417"; class_code "u"; exon_number "4"; oId "CUFF.138034.17"; tss_id "TSS139476";
 38	Cufflinks	exon	10884994	10885190	.	+	.	gene_id "XLOC_090672"; transcript_id "TCONS_00231774"; class_code "u"; exon_number "1"; oId "CUFF.138756.1"; tss_id "TSS139649";
 38	Cufflinks	exon	10886343	10886878	.	+	.	gene_id "XLOC_090672"; transcript_id "TCONS_00231774"; class_code "u"; exon_number "2"; oId "CUFF.138756.1"; tss_id "TSS139649";
+38	Cufflinks	exon	8177029	8178688	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232878"; class_code "u"; exon_number "1"; oId "CUFF.139147.4"; tss_id "TSS140230";
+38	Cufflinks	exon	8179884	8179977	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232878"; class_code "u"; exon_number "2"; oId "CUFF.139147.4"; tss_id "TSS140230";
+38	Cufflinks	exon	8180212	8180266	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232878"; class_code "u"; exon_number "3"; oId "CUFF.139147.4"; tss_id "TSS140230";
+38	Cufflinks	exon	13336795	13340728	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232949"; class_code "u"; exon_number "1"; oId "CUFF.138809.1"; tss_id "TSS140274";
+38	Cufflinks	exon	13342125	13342206	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232949"; class_code "u"; exon_number "2"; oId "CUFF.138809.1"; tss_id "TSS140274";
+38	Cufflinks	exon	13375525	13375609	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232949"; class_code "u"; exon_number "3"; oId "CUFF.138809.1"; tss_id "TSS140274";
+38	Cufflinks	exon	13377041	13377345	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232949"; class_code "u"; exon_number "4"; oId "CUFF.138809.1"; tss_id "TSS140274";
+38	Cufflinks	exon	2130667	2130710	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231601"; class_code "u"; exon_number "1"; oId "CUFF.137733.9"; tss_id "TSS139555";
+38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231601"; class_code "u"; exon_number "2"; oId "CUFF.137733.9"; tss_id "TSS139555";
+38	Cufflinks	exon	2133519	2134163	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231601"; class_code "u"; exon_number "3"; oId "CUFF.137733.9"; tss_id "TSS139555";
+38	Cufflinks	exon	17954360	17955431	.	+	.	gene_id "XLOC_090747"; transcript_id "TCONS_00232078"; class_code "u"; exon_number "1"; oId "CUFF.139118.1"; tss_id "TSS139800";
+38	Cufflinks	exon	17956218	17956622	.	+	.	gene_id "XLOC_090747"; transcript_id "TCONS_00232078"; class_code "u"; exon_number "2"; oId "CUFF.139118.1"; tss_id "TSS139800";
+38	Cufflinks	exon	21111893	21113398	.	+	.	gene_id "XLOC_090763"; transcript_id "TCONS_00232140"; class_code "u"; exon_number "1"; oId "CUFF.139529.2"; tss_id "TSS139830";
+38	Cufflinks	exon	21120236	21120378	.	+	.	gene_id "XLOC_090763"; transcript_id "TCONS_00232140"; class_code "u"; exon_number "2"; oId "CUFF.139529.2"; tss_id "TSS139830";
+38	Cufflinks	exon	22337039	22340652	.	-	.	gene_id "XLOC_091082"; transcript_id "TCONS_00233594"; class_code "u"; exon_number "1"; oId "CUFF.139693.2"; tss_id "TSS140576";
+38	Cufflinks	exon	22341062	22341528	.	-	.	gene_id "XLOC_091082"; transcript_id "TCONS_00233594"; class_code "u"; exon_number "2"; oId "CUFF.139693.2"; tss_id "TSS140576";
+38	Cufflinks	exon	22342786	22342949	.	-	.	gene_id "XLOC_091082"; transcript_id "TCONS_00233594"; class_code "u"; exon_number "3"; oId "CUFF.139693.2"; tss_id "TSS140576";
+38	Cufflinks	exon	11673388	11673607	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231789"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.2"; tss_id "TSS139654";
+38	Cufflinks	exon	11678691	11678912	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231789"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.2"; tss_id "TSS139654";
+38	Cufflinks	exon	11707416	11707490	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231789"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.2"; tss_id "TSS139654";
+38	Cufflinks	exon	11709024	11709478	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231789"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.2"; tss_id "TSS139654";
+38	Cufflinks	exon	515156	515948	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "1"; oId "CUFF.138034.6"; tss_id "TSS139475";
+38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "2"; oId "CUFF.138034.6"; tss_id "TSS139475";
+38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "3"; oId "CUFF.138034.6"; tss_id "TSS139475";
+38	Cufflinks	exon	521313	523494	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "4"; oId "CUFF.138034.6"; tss_id "TSS139475";
+38	Cufflinks	exon	523640	523712	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "5"; oId "CUFF.138034.6"; tss_id "TSS139475";
+38	Cufflinks	exon	524283	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "6"; oId "CUFF.138034.6"; tss_id "TSS139475";
+38	Cufflinks	exon	21688797	21688863	.	+	.	gene_id "XLOC_090788"; transcript_id "TCONS_00232240"; class_code "u"; exon_number "1"; oId "CUFF.139573.1"; tss_id "TSS139894";
+38	Cufflinks	exon	21689270	21692383	.	+	.	gene_id "XLOC_090788"; transcript_id "TCONS_00232240"; class_code "u"; exon_number "2"; oId "CUFF.139573.1"; tss_id "TSS139894";
+38	Cufflinks	exon	11673388	11673575	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231788"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.1"; tss_id "TSS139654";
+38	Cufflinks	exon	11678691	11679001	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231788"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.1"; tss_id "TSS139654";
+38	Cufflinks	exon	2129920	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231599"; class_code "u"; exon_number "1"; oId "CUFF.137733.7"; tss_id "TSS139554";
+38	Cufflinks	exon	2130294	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231599"; class_code "u"; exon_number "2"; oId "CUFF.137733.7"; tss_id "TSS139554";
+38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231599"; class_code "u"; exon_number "3"; oId "CUFF.137733.7"; tss_id "TSS139554";
+38	Cufflinks	exon	2143678	2144988	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231599"; class_code "u"; exon_number "4"; oId "CUFF.137733.7"; tss_id "TSS139554";
+38	Cufflinks	exon	15385775	15386819	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231909"; class_code "u"; exon_number "1"; oId "CUFF.138911.4"; tss_id "TSS139710";
+38	Cufflinks	exon	15387359	15387460	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231909"; class_code "u"; exon_number "2"; oId "CUFF.138911.4"; tss_id "TSS139710";
+38	Cufflinks	exon	15390507	15390631	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231909"; class_code "u"; exon_number "3"; oId "CUFF.138911.4"; tss_id "TSS139710";
+38	Cufflinks	exon	15392302	15393571	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231909"; class_code "u"; exon_number "4"; oId "CUFF.138911.4"; tss_id "TSS139710";
+38	Cufflinks	exon	14171877	14172134	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231841"; class_code "u"; exon_number "1"; oId "CUFF.138853.1"; tss_id "TSS139682";
+38	Cufflinks	exon	14182942	14183155	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231841"; class_code "u"; exon_number "2"; oId "CUFF.138853.1"; tss_id "TSS139682";
+38	Cufflinks	exon	14188862	14188941	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231841"; class_code "u"; exon_number "3"; oId "CUFF.138853.1"; tss_id "TSS139682";
+38	Cufflinks	exon	14191749	14193112	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231841"; class_code "u"; exon_number "4"; oId "CUFF.138853.1"; tss_id "TSS139682";
+38	Cufflinks	exon	14620552	14621960	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232972"; class_code "u"; exon_number "1"; oId "CUFF.138906.2"; tss_id "TSS140294";
+38	Cufflinks	exon	14622096	14622341	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232972"; class_code "u"; exon_number "2"; oId "CUFF.138906.2"; tss_id "TSS140294";
+38	Cufflinks	exon	14622460	14624208	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232972"; class_code "u"; exon_number "3"; oId "CUFF.138906.2"; tss_id "TSS140294";
+38	Cufflinks	exon	14624298	14625151	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232972"; class_code "u"; exon_number "4"; oId "CUFF.138906.2"; tss_id "TSS140294";
+38	Cufflinks	exon	16233866	16234215	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231951"; class_code "u"; exon_number "1"; oId "CUFF.139090.1"; tss_id "TSS139738";
+38	Cufflinks	exon	16235018	16235146	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231951"; class_code "u"; exon_number "2"; oId "CUFF.139090.1"; tss_id "TSS139738";
+38	Cufflinks	exon	16237698	16242403	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231951"; class_code "u"; exon_number "3"; oId "CUFF.139090.1"; tss_id "TSS139738";
+38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232660"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.5"; tss_id "TSS140117";
+38	Cufflinks	exon	1923288	1926646	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232660"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.5"; tss_id "TSS140117";
+38	Cufflinks	exon	741113	741166	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
+38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
+38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
+38	Cufflinks	exon	744578	745569	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
+38	Cufflinks	exon	746561	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
+38	Cufflinks	exon	750260	751381	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
+38	Cufflinks	exon	751770	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
+38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
+38	Cufflinks	exon	16235035	16235146	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231952"; class_code "u"; exon_number "1"; oId "CUFF.139090.2"; tss_id "TSS139739";
+38	Cufflinks	exon	16237698	16238628	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231952"; class_code "u"; exon_number "2"; oId "CUFF.139090.2"; tss_id "TSS139739";
+38	Cufflinks	exon	16239630	16242403	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231952"; class_code "u"; exon_number "3"; oId "CUFF.139090.2"; tss_id "TSS139739";
+38	Cufflinks	exon	22081548	22081574	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232321"; class_code "u"; exon_number "1"; oId "CUFF.139671.4"; tss_id "TSS139929";
+38	Cufflinks	exon	22091338	22092743	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232321"; class_code "u"; exon_number "2"; oId "CUFF.139671.4"; tss_id "TSS139929";
+38	Cufflinks	exon	16416187	16416330	.	+	.	gene_id "XLOC_090727"; transcript_id "TCONS_00231958"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000013637"; nearest_ref "ENSCAFT00000021622"; oId "CUFF.139057.2"; tss_id "TSS139743";
+38	Cufflinks	exon	16446254	16446434	.	+	.	gene_id "XLOC_090727"; transcript_id "TCONS_00231958"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000013637"; nearest_ref "ENSCAFT00000021622"; oId "CUFF.139057.2"; tss_id "TSS139743";
+38	Cufflinks	exon	16464240	16464412	.	+	.	gene_id "XLOC_090727"; transcript_id "TCONS_00231958"; class_code "o"; exon_number "3"; gene_name "ENSCAFG00000013637"; nearest_ref "ENSCAFT00000021622"; oId "CUFF.139057.2"; tss_id "TSS139743";
+38	Cufflinks	exon	16468046	16468347	.	+	.	gene_id "XLOC_090727"; transcript_id "TCONS_00231958"; class_code "o"; exon_number "4"; gene_name "ENSCAFG00000013637"; nearest_ref "ENSCAFT00000021622"; oId "CUFF.139057.2"; tss_id "TSS139743";
+38	Cufflinks	exon	22147891	22150285	.	-	.	gene_id "XLOC_091071"; transcript_id "TCONS_00233577"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011865"; nearest_ref "ENSCAFT00000018843"; oId "CUFF.139678.1"; tss_id "TSS140564";
+38	Cufflinks	exon	22150726	22150759	.	-	.	gene_id "XLOC_091071"; transcript_id "TCONS_00233577"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011865"; nearest_ref "ENSCAFT00000018843"; oId "CUFF.139678.1"; tss_id "TSS140564";
+38	Cufflinks	exon	2129920	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231597"; class_code "u"; exon_number "1"; oId "CUFF.137733.5"; tss_id "TSS139554";
+38	Cufflinks	exon	2130294	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231597"; class_code "u"; exon_number "2"; oId "CUFF.137733.5"; tss_id "TSS139554";
+38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231597"; class_code "u"; exon_number "3"; oId "CUFF.137733.5"; tss_id "TSS139554";
+38	Cufflinks	exon	2133519	2134163	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231597"; class_code "u"; exon_number "4"; oId "CUFF.137733.5"; tss_id "TSS139554";
+38	Cufflinks	exon	14197051	14197208	.	+	.	gene_id "XLOC_090689"; transcript_id "TCONS_00231844"; class_code "u"; exon_number "1"; oId "CUFF.138857.1"; tss_id "TSS139684";
+38	Cufflinks	exon	14197716	14197890	.	+	.	gene_id "XLOC_090689"; transcript_id "TCONS_00231844"; class_code "u"; exon_number "2"; oId "CUFF.138857.1"; tss_id "TSS139684";
+38	Cufflinks	exon	14200601	14203671	.	+	.	gene_id "XLOC_090689"; transcript_id "TCONS_00231844"; class_code "u"; exon_number "3"; oId "CUFF.138857.1"; tss_id "TSS139684";
+38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231402"; class_code "u"; exon_number "1"; oId "CUFF.138034.10"; tss_id "TSS139475";
+38	Cufflinks	exon	516357	516383	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231402"; class_code "u"; exon_number "2"; oId "CUFF.138034.10"; tss_id "TSS139475";
+38	Cufflinks	exon	518126	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231402"; class_code "u"; exon_number "3"; oId "CUFF.138034.10"; tss_id "TSS139475";
+38	Cufflinks	exon	12361118	12361614	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232925"; class_code "u"; exon_number "1"; oId "CUFF.139445.20"; tss_id "TSS140256";
+38	Cufflinks	exon	12382739	12382934	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232925"; class_code "u"; exon_number "2"; oId "CUFF.139445.20"; tss_id "TSS140256";
+38	Cufflinks	exon	16475585	16475994	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233056"; class_code "u"; exon_number "1"; oId "CUFF.139062.2"; tss_id "TSS140341";
+38	Cufflinks	exon	16521012	16521125	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233056"; class_code "u"; exon_number "2"; oId "CUFF.139062.2"; tss_id "TSS140341";
+38	Cufflinks	exon	16530020	16530180	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233056"; class_code "u"; exon_number "3"; oId "CUFF.139062.2"; tss_id "TSS140341";
+38	Cufflinks	exon	20693076	20693130	.	-	.	gene_id "XLOC_091024"; transcript_id "TCONS_00233259"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013079"; nearest_ref "ENSCAFT00000020753"; oId "CUFF.139410.1"; tss_id "TSS140437";
+38	Cufflinks	exon	20693191	20694699	.	-	.	gene_id "XLOC_091024"; transcript_id "TCONS_00233259"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013079"; nearest_ref "ENSCAFT00000020753"; oId "CUFF.139410.1"; tss_id "TSS140437";
+38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231408"; class_code "u"; exon_number "1"; oId "CUFF.138034.4"; tss_id "TSS139475";
+38	Cufflinks	exon	516357	524422	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231408"; class_code "u"; exon_number "2"; oId "CUFF.138034.4"; tss_id "TSS139475";
+38	Cufflinks	exon	533362	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231408"; class_code "u"; exon_number "3"; oId "CUFF.138034.4"; tss_id "TSS139475";
+38	Cufflinks	exon	23498078	23498775	.	-	.	gene_id "XLOC_091111"; transcript_id "TCONS_00233707"; class_code "u"; exon_number "1"; oId "CUFF.139766.1"; tss_id "TSS140636";
+38	Cufflinks	exon	23498994	23499036	.	-	.	gene_id "XLOC_091111"; transcript_id "TCONS_00233707"; class_code "u"; exon_number "2"; oId "CUFF.139766.1"; tss_id "TSS140636";
+38	Cufflinks	exon	22081548	22081574	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232320"; class_code "u"; exon_number "1"; oId "CUFF.139671.3"; tss_id "TSS139929";
+38	Cufflinks	exon	22090158	22092743	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232320"; class_code "u"; exon_number "2"; oId "CUFF.139671.3"; tss_id "TSS139929";
+38	Cufflinks	exon	5990801	5990843	.	+	.	gene_id "XLOC_090660"; transcript_id "TCONS_00231733"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010552"; nearest_ref "ENSCAFT00000016789"; oId "CUFF.138298.1"; tss_id "TSS139625";
+38	Cufflinks	exon	5997900	5999132	.	+	.	gene_id "XLOC_090660"; transcript_id "TCONS_00231733"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010552"; nearest_ref "ENSCAFT00000016789"; oId "CUFF.138298.1"; tss_id "TSS139625";
+38	Cufflinks	exon	742766	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231451"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.8"; tss_id "TSS139492";
+38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231451"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.8"; tss_id "TSS139492";
+38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231451"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.8"; tss_id "TSS139492";
+38	Cufflinks	exon	744578	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231451"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.8"; tss_id "TSS139492";
+38	Cufflinks	exon	750260	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231451"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.8"; tss_id "TSS139492";
+38	Cufflinks	exon	1646751	1646872	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231533"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.3"; tss_id "TSS139524";
+38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231533"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.3"; tss_id "TSS139524";
+38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231533"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.3"; tss_id "TSS139524";
+38	Cufflinks	exon	1671930	1674716	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231533"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.3"; tss_id "TSS139524";
+38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232403"; class_code "u"; exon_number "1"; oId "CUFF.139985.6"; tss_id "TSS139981";
+38	Cufflinks	exon	22859984	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232403"; class_code "u"; exon_number "2"; oId "CUFF.139985.6"; tss_id "TSS139981";
+38	Cufflinks	exon	22862511	22864181	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232403"; class_code "u"; exon_number "3"; oId "CUFF.139985.6"; tss_id "TSS139981";
+38	Cufflinks	exon	22865237	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232403"; class_code "u"; exon_number "4"; oId "CUFF.139985.6"; tss_id "TSS139981";
+38	Cufflinks	exon	431382	432716	.	-	.	gene_id "XLOC_090862"; transcript_id "TCONS_00232466"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000031149"; nearest_ref "ENSCAFT00000047341"; oId "CUFF.137612.1"; tss_id "TSS140024";
+38	Cufflinks	exon	440491	440651	.	-	.	gene_id "XLOC_090862"; transcript_id "TCONS_00232466"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000031149"; nearest_ref "ENSCAFT00000047341"; oId "CUFF.137612.1"; tss_id "TSS140024";
+38	Cufflinks	exon	21872669	21874742	.	+	.	gene_id "XLOC_090796"; transcript_id "TCONS_00232278"; class_code "u"; exon_number "1"; oId "CUFF.139663.1"; tss_id "TSS139909";
+38	Cufflinks	exon	21875827	21876894	.	+	.	gene_id "XLOC_090796"; transcript_id "TCONS_00232278"; class_code "u"; exon_number "2"; oId "CUFF.139663.1"; tss_id "TSS139909";
+38	Cufflinks	exon	17776393	17776462	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "1"; oId "CUFF.139126.4"; tss_id "TSS139789";
+38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "2"; oId "CUFF.139126.4"; tss_id "TSS139789";
+38	Cufflinks	exon	17781481	17782059	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "3"; oId "CUFF.139126.4"; tss_id "TSS139789";
+38	Cufflinks	exon	17782418	17782808	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "4"; oId "CUFF.139126.4"; tss_id "TSS139789";
+38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "5"; oId "CUFF.139126.4"; tss_id "TSS139789";
+38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "6"; oId "CUFF.139126.4"; tss_id "TSS139789";
+38	Cufflinks	exon	17796338	17796598	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "7"; oId "CUFF.139126.4"; tss_id "TSS139789";
+38	Cufflinks	exon	17797004	17797666	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "8"; oId "CUFF.139126.4"; tss_id "TSS139789";
+38	Cufflinks	exon	12097749	12120113	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232920"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000025753"; nearest_ref "ENSCAFT00000040036"; oId "CUFF.139445.19"; tss_id "TSS140252";
+38	Cufflinks	exon	12255937	12256028	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232920"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000025753"; nearest_ref "ENSCAFT00000040036"; oId "CUFF.139445.19"; tss_id "TSS140252";
+38	Cufflinks	exon	12264257	12264330	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232920"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000025753"; nearest_ref "ENSCAFT00000040036"; oId "CUFF.139445.19"; tss_id "TSS140252";
+38	Cufflinks	exon	5246575	5247618	.	-	.	gene_id "XLOC_090921"; transcript_id "TCONS_00232804"; class_code "u"; exon_number "1"; oId "CUFF.138092.1"; tss_id "TSS140188";
+38	Cufflinks	exon	5254226	5254275	.	-	.	gene_id "XLOC_090921"; transcript_id "TCONS_00232804"; class_code "u"; exon_number "2"; oId "CUFF.138092.1"; tss_id "TSS140188";
+38	Cufflinks	exon	15025680	15026170	.	+	.	gene_id "XLOC_090700"; transcript_id "TCONS_00231870"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011125"; nearest_ref "ENSCAFT00000017715"; oId "CUFF.139355.2"; tss_id "TSS139700";
+38	Cufflinks	exon	15031573	15031853	.	+	.	gene_id "XLOC_090700"; transcript_id "TCONS_00231870"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011125"; nearest_ref "ENSCAFT00000017715"; oId "CUFF.139355.2"; tss_id "TSS139700";
+38	Cufflinks	exon	3646503	3646667	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231713"; class_code "u"; exon_number "1"; oId "CUFF.137958.3"; tss_id "TSS139609";
+38	Cufflinks	exon	3651620	3651701	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231713"; class_code "u"; exon_number "2"; oId "CUFF.137958.3"; tss_id "TSS139609";
+38	Cufflinks	exon	3652175	3652283	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231713"; class_code "u"; exon_number "3"; oId "CUFF.137958.3"; tss_id "TSS139609";
+38	Cufflinks	exon	20930283	20930820	.	-	.	gene_id "XLOC_091027"; transcript_id "TCONS_00233310"; class_code "u"; exon_number "1"; oId "CUFF.139404.1"; tss_id "TSS140456";
+38	Cufflinks	exon	20931334	20931511	.	-	.	gene_id "XLOC_091027"; transcript_id "TCONS_00233310"; class_code "u"; exon_number "2"; oId "CUFF.139404.1"; tss_id "TSS140456";
+38	Cufflinks	exon	20935500	20935529	.	-	.	gene_id "XLOC_091027"; transcript_id "TCONS_00233310"; class_code "u"; exon_number "3"; oId "CUFF.139404.1"; tss_id "TSS140456";
+38	Cufflinks	exon	22105750	22105913	.	-	.	gene_id "XLOC_091068"; transcript_id "TCONS_00233573"; class_code "u"; exon_number "1"; oId "CUFF.139694.4"; tss_id "TSS140561";
+38	Cufflinks	exon	22106902	22107116	.	-	.	gene_id "XLOC_091068"; transcript_id "TCONS_00233573"; class_code "u"; exon_number "2"; oId "CUFF.139694.4"; tss_id "TSS140561";
+38	Cufflinks	exon	16462049	16462310	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233052"; class_code "u"; exon_number "1"; oId "CUFF.139060.1"; tss_id "TSS140339";
+38	Cufflinks	exon	16462545	16463003	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233052"; class_code "u"; exon_number "2"; oId "CUFF.139060.1"; tss_id "TSS140339";
+38	Cufflinks	exon	1185983	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232597"; class_code "u"; exon_number "1"; oId "CUFF.137647.16"; tss_id "TSS140087";
+38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232597"; class_code "u"; exon_number "2"; oId "CUFF.137647.16"; tss_id "TSS140087";
+38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232597"; class_code "u"; exon_number "3"; oId "CUFF.137647.16"; tss_id "TSS140087";
+38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232597"; class_code "u"; exon_number "4"; oId "CUFF.137647.16"; tss_id "TSS140087";
+38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232597"; class_code "u"; exon_number "5"; oId "CUFF.137647.16"; tss_id "TSS140087";
+38	Cufflinks	exon	22062896	22062950	.	+	.	gene_id "XLOC_090801"; transcript_id "TCONS_00232317"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000012174"; nearest_ref "ENSCAFT00000019707"; oId "CUFF.140161.2"; tss_id "TSS139927";
+38	Cufflinks	exon	22064002	22070883	.	+	.	gene_id "XLOC_090801"; transcript_id "TCONS_00232317"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000012174"; nearest_ref "ENSCAFT00000019707"; oId "CUFF.140161.2"; tss_id "TSS139927";
+38	Cufflinks	exon	742767	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231453"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.13"; tss_id "TSS139492";
+38	Cufflinks	exon	744306	746943	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231453"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.13"; tss_id "TSS139492";
+38	Cufflinks	exon	750023	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231453"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.13"; tss_id "TSS139492";
+38	Cufflinks	exon	750260	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231453"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.13"; tss_id "TSS139492";
+38	Cufflinks	exon	7326701	7326855	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231757"; class_code "u"; exon_number "1"; oId "CUFF.138465.1"; tss_id "TSS139634";
+38	Cufflinks	exon	7355758	7355834	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231757"; class_code "u"; exon_number "2"; oId "CUFF.138465.1"; tss_id "TSS139634";
+38	Cufflinks	exon	7376399	7376811	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231757"; class_code "u"; exon_number "3"; oId "CUFF.138465.1"; tss_id "TSS139634";
+38	Cufflinks	exon	17808836	17809013	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232060"; class_code "u"; exon_number "1"; oId "CUFF.139119.1"; tss_id "TSS139790";
+38	Cufflinks	exon	17823682	17823764	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232060"; class_code "u"; exon_number "2"; oId "CUFF.139119.1"; tss_id "TSS139790";
+38	Cufflinks	exon	17824159	17824254	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232060"; class_code "u"; exon_number "3"; oId "CUFF.139119.1"; tss_id "TSS139790";
+38	Cufflinks	exon	17831186	17831875	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232060"; class_code "u"; exon_number "4"; oId "CUFF.139119.1"; tss_id "TSS139790";
+38	Cufflinks	exon	16693325	16693491	.	-	.	gene_id "XLOC_090993"; transcript_id "TCONS_00233058"; class_code "u"; exon_number "1"; oId "CUFF.139055.1"; tss_id "TSS140342";
+38	Cufflinks	exon	16716496	16716585	.	-	.	gene_id "XLOC_090993"; transcript_id "TCONS_00233058"; class_code "u"; exon_number "2"; oId "CUFF.139055.1"; tss_id "TSS140342";
+38	Cufflinks	exon	16718717	16718964	.	-	.	gene_id "XLOC_090993"; transcript_id "TCONS_00233058"; class_code "u"; exon_number "3"; oId "CUFF.139055.1"; tss_id "TSS140342";
+38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232400"; class_code "u"; exon_number "1"; oId "CUFF.139985.3"; tss_id "TSS139981";
+38	Cufflinks	exon	22859974	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232400"; class_code "u"; exon_number "2"; oId "CUFF.139985.3"; tss_id "TSS139981";
+38	Cufflinks	exon	22862511	22864181	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232400"; class_code "u"; exon_number "3"; oId "CUFF.139985.3"; tss_id "TSS139981";
+38	Cufflinks	exon	22865237	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232400"; class_code "u"; exon_number "4"; oId "CUFF.139985.3"; tss_id "TSS139981";
+38	Cufflinks	exon	16859262	16860441	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231967"; class_code "u"; exon_number "1"; oId "CUFF.139121.4"; tss_id "TSS139750";
+38	Cufflinks	exon	16866188	16870239	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231967"; class_code "u"; exon_number "2"; oId "CUFF.139121.4"; tss_id "TSS139750";
+38	Cufflinks	exon	1659097	1659115	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231538"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.5"; tss_id "TSS139525";
+38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231538"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.5"; tss_id "TSS139525";
+38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231538"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.5"; tss_id "TSS139525";
+38	Cufflinks	exon	1671930	1674716	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231538"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.5"; tss_id "TSS139525";
+38	Cufflinks	exon	21700271	21701731	.	-	.	gene_id "XLOC_091055"; transcript_id "TCONS_00233511"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000012569"; nearest_ref "ENSCAFT00000019970"; oId "CUFF.139588.1"; tss_id "TSS140523";
+38	Cufflinks	exon	21711494	21711553	.	-	.	gene_id "XLOC_091055"; transcript_id "TCONS_00233511"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000012569"; nearest_ref "ENSCAFT00000019970"; oId "CUFF.139588.1"; tss_id "TSS140523";
+38	Cufflinks	exon	21715277	21715367	.	-	.	gene_id "XLOC_091055"; transcript_id "TCONS_00233511"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000012569"; nearest_ref "ENSCAFT00000019970"; oId "CUFF.139588.1"; tss_id "TSS140523";
+38	Cufflinks	exon	516103	516383	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231419"; class_code "u"; exon_number "1"; oId "CUFF.138034.19"; tss_id "TSS139476";
+38	Cufflinks	exon	518126	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231419"; class_code "u"; exon_number "2"; oId "CUFF.138034.19"; tss_id "TSS139476";
+38	Cufflinks	exon	22367126	22367795	.	-	.	gene_id "XLOC_091084"; transcript_id "TCONS_00233602"; class_code "u"; exon_number "1"; oId "CUFF.139718.1"; tss_id "TSS140583";
+38	Cufflinks	exon	22368617	22368979	.	-	.	gene_id "XLOC_091084"; transcript_id "TCONS_00233602"; class_code "u"; exon_number "2"; oId "CUFF.139718.1"; tss_id "TSS140583";
+38	Cufflinks	exon	22347445	22347777	.	+	.	gene_id "XLOC_090818"; transcript_id "TCONS_00232387"; class_code "u"; exon_number "1"; oId "CUFF.139691.1"; tss_id "TSS139971";
+38	Cufflinks	exon	22348507	22349143	.	+	.	gene_id "XLOC_090818"; transcript_id "TCONS_00232387"; class_code "u"; exon_number "2"; oId "CUFF.139691.1"; tss_id "TSS139971";
+38	Cufflinks	exon	1795723	1795760	.	+	.	gene_id "XLOC_090627"; transcript_id "TCONS_00231552"; class_code "u"; exon_number "1"; oId "CUFF.137644.1"; tss_id "TSS139538";
+38	Cufflinks	exon	1796721	1797171	.	+	.	gene_id "XLOC_090627"; transcript_id "TCONS_00231552"; class_code "u"; exon_number "2"; oId "CUFF.137644.1"; tss_id "TSS139538";
+38	Cufflinks	exon	2773996	2779988	.	-	.	gene_id "XLOC_090915"; transcript_id "TCONS_00232763"; class_code "u"; exon_number "1"; oId "CUFF.138073.2"; tss_id "TSS140177";
+38	Cufflinks	exon	2780537	2781282	.	-	.	gene_id "XLOC_090915"; transcript_id "TCONS_00232763"; class_code "u"; exon_number "2"; oId "CUFF.138073.2"; tss_id "TSS140177";
+38	Cufflinks	exon	15550307	15551545	.	-	.	gene_id "XLOC_090989"; transcript_id "TCONS_00233037"; class_code "u"; exon_number "1"; oId "CUFF.138955.2"; tss_id "TSS140328";
+38	Cufflinks	exon	15552281	15552503	.	-	.	gene_id "XLOC_090989"; transcript_id "TCONS_00233037"; class_code "u"; exon_number "2"; oId "CUFF.138955.2"; tss_id "TSS140328";
+38	Cufflinks	exon	15553290	15553318	.	-	.	gene_id "XLOC_090989"; transcript_id "TCONS_00233037"; class_code "u"; exon_number "3"; oId "CUFF.138955.2"; tss_id "TSS140328";
 38	Cufflinks	exon	11546597	11546763	.	+	.	gene_id "XLOC_090674"; transcript_id "TCONS_00231787"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139324.1"; tss_id "TSS139653";
 38	Cufflinks	exon	11560208	11560407	.	+	.	gene_id "XLOC_090674"; transcript_id "TCONS_00231787"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139324.1"; tss_id "TSS139653";
 38	Cufflinks	exon	11561016	11561260	.	+	.	gene_id "XLOC_090674"; transcript_id "TCONS_00231787"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139324.1"; tss_id "TSS139653";
 38	Cufflinks	exon	11565818	11566499	.	+	.	gene_id "XLOC_090674"; transcript_id "TCONS_00231787"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139324.1"; tss_id "TSS139653";
-38	Cufflinks	exon	11673388	11673575	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231788"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.1"; tss_id "TSS139654";
-38	Cufflinks	exon	11673388	11673607	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231789"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.2"; tss_id "TSS139654";
-38	Cufflinks	exon	11673655	11673730	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231790"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.3"; tss_id "TSS139655";
-38	Cufflinks	exon	11678691	11678912	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231789"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.2"; tss_id "TSS139654";
-38	Cufflinks	exon	11678691	11679001	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231788"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.1"; tss_id "TSS139654";
-38	Cufflinks	exon	11678691	11679001	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231790"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.3"; tss_id "TSS139655";
-38	Cufflinks	exon	11707416	11707490	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231789"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.2"; tss_id "TSS139654";
-38	Cufflinks	exon	11709024	11709478	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231789"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.2"; tss_id "TSS139654";
-38	Cufflinks	exon	1185983	1186688	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232593"; class_code "u"; exon_number "1"; oId "CUFF.137647.13"; tss_id "TSS140087";
+38	Cufflinks	exon	19604003	19604550	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232086"; class_code "u"; exon_number "1"; oId "CUFF.139381.2"; tss_id "TSS139807";
+38	Cufflinks	exon	19604843	19604983	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232086"; class_code "u"; exon_number "2"; oId "CUFF.139381.2"; tss_id "TSS139807";
+38	Cufflinks	exon	19605120	19609707	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232086"; class_code "u"; exon_number "3"; oId "CUFF.139381.2"; tss_id "TSS139807";
+38	Cufflinks	exon	15550307	15551545	.	-	.	gene_id "XLOC_090989"; transcript_id "TCONS_00233036"; class_code "u"; exon_number "1"; oId "CUFF.138955.1"; tss_id "TSS140328";
+38	Cufflinks	exon	15552281	15553248	.	-	.	gene_id "XLOC_090989"; transcript_id "TCONS_00233036"; class_code "u"; exon_number "2"; oId "CUFF.138955.1"; tss_id "TSS140328";
+38	Cufflinks	exon	20614031	20614239	.	+	.	gene_id "XLOC_090758"; transcript_id "TCONS_00232115"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013086"; nearest_ref "ENSCAFT00000020761"; oId "CUFF.139645.1"; tss_id "TSS139819";
+38	Cufflinks	exon	20627400	20627541	.	+	.	gene_id "XLOC_090758"; transcript_id "TCONS_00232115"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013086"; nearest_ref "ENSCAFT00000020761"; oId "CUFF.139645.1"; tss_id "TSS139819";
+38	Cufflinks	exon	20627657	20629009	.	+	.	gene_id "XLOC_090758"; transcript_id "TCONS_00232115"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000013086"; nearest_ref "ENSCAFT00000020761"; oId "CUFF.139645.1"; tss_id "TSS139819";
+38	Cufflinks	exon	7751690	7751717	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232876"; class_code "u"; exon_number "1"; oId "CUFF.138454.3"; tss_id "TSS140226";
+38	Cufflinks	exon	7755613	7756228	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232876"; class_code "u"; exon_number "2"; oId "CUFF.138454.3"; tss_id "TSS140226";
+38	Cufflinks	exon	22084588	22084609	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232322"; class_code "u"; exon_number "1"; oId "CUFF.139671.5"; tss_id "TSS139930";
+38	Cufflinks	exon	22085213	22085360	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232322"; class_code "u"; exon_number "2"; oId "CUFF.139671.5"; tss_id "TSS139930";
+38	Cufflinks	exon	22090158	22092743	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232322"; class_code "u"; exon_number "3"; oId "CUFF.139671.5"; tss_id "TSS139930";
+38	Cufflinks	exon	17769751	17769862	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
+38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
+38	Cufflinks	exon	17781481	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
+38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
+38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
+38	Cufflinks	exon	17798695	17798844	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
+38	Cufflinks	exon	17807870	17808287	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
+38	Cufflinks	exon	16778547	16778884	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233060"; class_code "u"; exon_number "1"; oId "CUFF.139054.1"; tss_id "TSS140344";
+38	Cufflinks	exon	16779181	16779289	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233060"; class_code "u"; exon_number "2"; oId "CUFF.139054.1"; tss_id "TSS140344";
+38	Cufflinks	exon	16781014	16781154	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233060"; class_code "u"; exon_number "3"; oId "CUFF.139054.1"; tss_id "TSS140344";
+38	Cufflinks	exon	16781752	16781786	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233060"; class_code "u"; exon_number "4"; oId "CUFF.139054.1"; tss_id "TSS140344";
+38	Cufflinks	exon	1659090	1659115	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231537"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.4"; tss_id "TSS139525";
+38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231537"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.4"; tss_id "TSS139525";
+38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231537"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.4"; tss_id "TSS139525";
+38	Cufflinks	exon	1684969	1685040	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231537"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.4"; tss_id "TSS139525";
+38	Cufflinks	exon	16778547	16778953	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233059"; class_code "u"; exon_number "1"; oId "CUFF.139054.2"; tss_id "TSS140343";
+38	Cufflinks	exon	16779181	16779289	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233059"; class_code "u"; exon_number "2"; oId "CUFF.139054.2"; tss_id "TSS140343";
+38	Cufflinks	exon	16781014	16781375	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233059"; class_code "u"; exon_number "3"; oId "CUFF.139054.2"; tss_id "TSS140343";
+38	Cufflinks	exon	13767077	13767107	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "1"; oId "CUFF.138970.1"; tss_id "TSS140280";
+38	Cufflinks	exon	13843886	13844017	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "2"; oId "CUFF.138970.1"; tss_id "TSS140280";
+38	Cufflinks	exon	14050396	14050465	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "3"; oId "CUFF.138970.1"; tss_id "TSS140280";
+38	Cufflinks	exon	14077181	14077299	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "4"; oId "CUFF.138970.1"; tss_id "TSS140280";
+38	Cufflinks	exon	14098539	14098634	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "5"; oId "CUFF.138970.1"; tss_id "TSS140280";
+38	Cufflinks	exon	14100364	14100524	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "6"; oId "CUFF.138970.1"; tss_id "TSS140280";
+38	Cufflinks	exon	22062648	22062673	.	+	.	gene_id "XLOC_090801"; transcript_id "TCONS_00232316"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000012174"; nearest_ref "ENSCAFT00000019707"; oId "CUFF.140161.1"; tss_id "TSS139926";
+38	Cufflinks	exon	22062856	22062954	.	+	.	gene_id "XLOC_090801"; transcript_id "TCONS_00232316"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000012174"; nearest_ref "ENSCAFT00000019707"; oId "CUFF.140161.1"; tss_id "TSS139926";
+38	Cufflinks	exon	22064002	22070883	.	+	.	gene_id "XLOC_090801"; transcript_id "TCONS_00232316"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000012174"; nearest_ref "ENSCAFT00000019707"; oId "CUFF.140161.1"; tss_id "TSS139926";
+38	Cufflinks	exon	10646531	10646561	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232893"; class_code "u"; exon_number "1"; oId "CUFF.138746.1"; tss_id "TSS140242";
+38	Cufflinks	exon	10663297	10663355	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232893"; class_code "u"; exon_number "2"; oId "CUFF.138746.1"; tss_id "TSS140242";
+38	Cufflinks	exon	10664410	10664532	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232893"; class_code "u"; exon_number "3"; oId "CUFF.138746.1"; tss_id "TSS140242";
+38	Cufflinks	exon	10665521	10665896	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232893"; class_code "u"; exon_number "4"; oId "CUFF.138746.1"; tss_id "TSS140242";
+38	Cufflinks	exon	17693492	17695902	.	+	.	gene_id "XLOC_090742"; transcript_id "TCONS_00232052"; class_code "u"; exon_number "1"; oId "CUFF.139103.1"; tss_id "TSS139787";
+38	Cufflinks	exon	17696516	17696631	.	+	.	gene_id "XLOC_090742"; transcript_id "TCONS_00232052"; class_code "u"; exon_number "2"; oId "CUFF.139103.1"; tss_id "TSS139787";
+38	Cufflinks	exon	14557140	14557412	.	-	.	gene_id "XLOC_090972"; transcript_id "TCONS_00232969"; class_code "u"; exon_number "1"; oId "CUFF.138844.1"; tss_id "TSS140292";
+38	Cufflinks	exon	14557584	14557670	.	-	.	gene_id "XLOC_090972"; transcript_id "TCONS_00232969"; class_code "u"; exon_number "2"; oId "CUFF.138844.1"; tss_id "TSS140292";
+38	Cufflinks	exon	14599434	14600412	.	-	.	gene_id "XLOC_090972"; transcript_id "TCONS_00232969"; class_code "u"; exon_number "3"; oId "CUFF.138844.1"; tss_id "TSS140292";
+38	Cufflinks	exon	19604002	19604029	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232085"; class_code "u"; exon_number "1"; oId "CUFF.139381.1"; tss_id "TSS139807";
+38	Cufflinks	exon	19604843	19604983	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232085"; class_code "u"; exon_number "2"; oId "CUFF.139381.1"; tss_id "TSS139807";
+38	Cufflinks	exon	19605120	19609707	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232085"; class_code "u"; exon_number "3"; oId "CUFF.139381.1"; tss_id "TSS139807";
+38	Cufflinks	exon	6453472	6453791	.	+	.	gene_id "XLOC_090664"; transcript_id "TCONS_00231756"; class_code "u"; exon_number "1"; oId "CUFF.138315.1"; tss_id "TSS139633";
+38	Cufflinks	exon	6454379	6454536	.	+	.	gene_id "XLOC_090664"; transcript_id "TCONS_00231756"; class_code "u"; exon_number "2"; oId "CUFF.138315.1"; tss_id "TSS139633";
+38	Cufflinks	exon	6464589	6464857	.	+	.	gene_id "XLOC_090664"; transcript_id "TCONS_00231756"; class_code "u"; exon_number "3"; oId "CUFF.138315.1"; tss_id "TSS139633";
+38	Cufflinks	exon	21764927	21765608	.	-	.	gene_id "XLOC_091056"; transcript_id "TCONS_00233512"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000023704"; nearest_ref "ENSCAFT00000036617"; oId "CUFF.139615.1"; tss_id "TSS140524";
+38	Cufflinks	exon	21768072	21768188	.	-	.	gene_id "XLOC_091056"; transcript_id "TCONS_00233512"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000023704"; nearest_ref "ENSCAFT00000036617"; oId "CUFF.139615.1"; tss_id "TSS140524";
+38	Cufflinks	exon	14188197	14188739	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231843"; class_code "u"; exon_number "1"; oId "CUFF.138853.3"; tss_id "TSS139683";
+38	Cufflinks	exon	14188862	14188941	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231843"; class_code "u"; exon_number "2"; oId "CUFF.138853.3"; tss_id "TSS139683";
+38	Cufflinks	exon	14191749	14193112	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231843"; class_code "u"; exon_number "3"; oId "CUFF.138853.3"; tss_id "TSS139683";
+38	Cufflinks	exon	15677388	15677508	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231944"; class_code "u"; exon_number "1"; oId "CUFF.139024.3"; tss_id "TSS139731";
+38	Cufflinks	exon	15749663	15749741	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231944"; class_code "u"; exon_number "2"; oId "CUFF.139024.3"; tss_id "TSS139731";
+38	Cufflinks	exon	15798860	15799144	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231944"; class_code "u"; exon_number "3"; oId "CUFF.139024.3"; tss_id "TSS139731";
+38	Cufflinks	exon	16339470	16339496	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231954"; class_code "u"; exon_number "1"; oId "CUFF.139051.1"; tss_id "TSS139741";
+38	Cufflinks	exon	16350683	16350811	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231954"; class_code "u"; exon_number "2"; oId "CUFF.139051.1"; tss_id "TSS139741";
+38	Cufflinks	exon	16359984	16360156	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231954"; class_code "u"; exon_number "3"; oId "CUFF.139051.1"; tss_id "TSS139741";
+38	Cufflinks	exon	16371249	16373514	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231954"; class_code "u"; exon_number "4"; oId "CUFF.139051.1"; tss_id "TSS139741";
+38	Cufflinks	exon	2129919	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231596"; class_code "u"; exon_number "1"; oId "CUFF.137733.4"; tss_id "TSS139554";
+38	Cufflinks	exon	2143678	2144988	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231596"; class_code "u"; exon_number "2"; oId "CUFF.137733.4"; tss_id "TSS139554";
+38	Cufflinks	exon	22873643	22873746	.	+	.	gene_id "XLOC_090829"; transcript_id "TCONS_00232406"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000025115"; nearest_ref "ENSCAFT00000018582"; oId "CUFF.139989.2"; tss_id "TSS139983";
+38	Cufflinks	exon	22873862	22874891	.	+	.	gene_id "XLOC_090829"; transcript_id "TCONS_00232406"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000025115"; nearest_ref "ENSCAFT00000018582"; oId "CUFF.139989.2"; tss_id "TSS139983";
+38	Cufflinks	exon	22875129	22875194	.	+	.	gene_id "XLOC_090829"; transcript_id "TCONS_00232406"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000025115"; nearest_ref "ENSCAFT00000018582"; oId "CUFF.139989.2"; tss_id "TSS139983";
 38	Cufflinks	exon	1185983	1186688	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "1"; oId "CUFF.137647.17"; tss_id "TSS140087";
-38	Cufflinks	exon	1185983	1186688	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "1"; oId "CUFF.137647.18"; tss_id "TSS140087";
-38	Cufflinks	exon	1185983	1186688	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "1"; oId "CUFF.137647.22"; tss_id "TSS140087";
-38	Cufflinks	exon	1185983	1186691	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232595"; class_code "u"; exon_number "1"; oId "CUFF.137647.14"; tss_id "TSS140087";
-38	Cufflinks	exon	1185983	1186691	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "1"; oId "CUFF.137647.15"; tss_id "TSS140087";
-38	Cufflinks	exon	1185983	1186691	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232600"; class_code "u"; exon_number "1"; oId "CUFF.137647.20"; tss_id "TSS140087";
-38	Cufflinks	exon	1185983	1186691	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "1"; oId "CUFF.137647.21"; tss_id "TSS140087";
-38	Cufflinks	exon	1185983	1186691	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "1"; oId "CUFF.137647.11"; tss_id "TSS140087";
-38	Cufflinks	exon	1185983	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232594"; class_code "u"; exon_number "1"; oId "CUFF.137647.19"; tss_id "TSS140087";
-38	Cufflinks	exon	1185983	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232597"; class_code "u"; exon_number "1"; oId "CUFF.137647.16"; tss_id "TSS140087";
-38	Cufflinks	exon	1185983	1187098	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232602"; class_code "u"; exon_number "1"; oId "CUFF.137647.12"; tss_id "TSS140087";
-38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232593"; class_code "u"; exon_number "2"; oId "CUFF.137647.13"; tss_id "TSS140087";
 38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "2"; oId "CUFF.137647.17"; tss_id "TSS140087";
-38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "2"; oId "CUFF.137647.18"; tss_id "TSS140087";
+38	Cufflinks	exon	1187119	1187286	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "3"; oId "CUFF.137647.17"; tss_id "TSS140087";
+38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "4"; oId "CUFF.137647.17"; tss_id "TSS140087";
+38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "5"; oId "CUFF.137647.17"; tss_id "TSS140087";
+38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "6"; oId "CUFF.137647.17"; tss_id "TSS140087";
+38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "7"; oId "CUFF.137647.17"; tss_id "TSS140087";
+38	Cufflinks	exon	23500593	23502384	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232436"; class_code "u"; exon_number "1"; oId "CUFF.139777.4"; tss_id "TSS140006";
+38	Cufflinks	exon	23503116	23505172	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232436"; class_code "u"; exon_number "2"; oId "CUFF.139777.4"; tss_id "TSS140006";
+38	Cufflinks	exon	23505320	23506473	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232436"; class_code "u"; exon_number "3"; oId "CUFF.139777.4"; tss_id "TSS140006";
+38	Cufflinks	exon	23506760	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232436"; class_code "u"; exon_number "4"; oId "CUFF.139777.4"; tss_id "TSS140006";
+38	Cufflinks	exon	13158450	13160274	.	-	.	gene_id "XLOC_090960"; transcript_id "TCONS_00232947"; class_code "u"; exon_number "1"; oId "CUFF.138781.1"; tss_id "TSS140272";
+38	Cufflinks	exon	13176178	13176277	.	-	.	gene_id "XLOC_090960"; transcript_id "TCONS_00232947"; class_code "u"; exon_number "2"; oId "CUFF.138781.1"; tss_id "TSS140272";
+38	Cufflinks	exon	21020477	21021490	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233352"; class_code "u"; exon_number "1"; oId "CUFF.139547.2"; tss_id "TSS140468";
+38	Cufflinks	exon	21022238	21022364	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233352"; class_code "u"; exon_number "2"; oId "CUFF.139547.2"; tss_id "TSS140468";
+38	Cufflinks	exon	21041320	21041562	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233352"; class_code "u"; exon_number "3"; oId "CUFF.139547.2"; tss_id "TSS140468";
+38	Cufflinks	exon	14330738	14330808	.	+	.	gene_id "XLOC_090690"; transcript_id "TCONS_00231846"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000021604"; nearest_ref "ENSCAFT00000033711"; oId "CUFF.138877.2"; tss_id "TSS139686";
+38	Cufflinks	exon	14361040	14371848	.	+	.	gene_id "XLOC_090690"; transcript_id "TCONS_00231846"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000021604"; nearest_ref "ENSCAFT00000033711"; oId "CUFF.138877.2"; tss_id "TSS139686";
+38	Cufflinks	exon	20614031	20614364	.	+	.	gene_id "XLOC_090758"; transcript_id "TCONS_00232114"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013086"; nearest_ref "ENSCAFT00000020761"; oId "CUFF.139645.2"; tss_id "TSS139819";
+38	Cufflinks	exon	20621470	20622028	.	+	.	gene_id "XLOC_090758"; transcript_id "TCONS_00232114"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013086"; nearest_ref "ENSCAFT00000020761"; oId "CUFF.139645.2"; tss_id "TSS139819";
+38	Cufflinks	exon	21859927	21862306	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233538"; class_code "u"; exon_number "1"; oId "CUFF.139665.1"; tss_id "TSS140542";
+38	Cufflinks	exon	21862693	21862860	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233538"; class_code "u"; exon_number "2"; oId "CUFF.139665.1"; tss_id "TSS140542";
+38	Cufflinks	exon	21863481	21867420	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233538"; class_code "u"; exon_number "3"; oId "CUFF.139665.1"; tss_id "TSS140542";
+38	Cufflinks	exon	1185983	1187098	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232602"; class_code "u"; exon_number "1"; oId "CUFF.137647.12"; tss_id "TSS140087";
+38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232602"; class_code "u"; exon_number "2"; oId "CUFF.137647.12"; tss_id "TSS140087";
+38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232602"; class_code "u"; exon_number "3"; oId "CUFF.137647.12"; tss_id "TSS140087";
+38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232602"; class_code "u"; exon_number "4"; oId "CUFF.137647.12"; tss_id "TSS140087";
+38	Cufflinks	exon	1217209	1217444	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232602"; class_code "u"; exon_number "5"; oId "CUFF.137647.12"; tss_id "TSS140087";
+38	Cufflinks	exon	2773996	2779988	.	-	.	gene_id "XLOC_090915"; transcript_id "TCONS_00232764"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000029799"; nearest_ref "ENSCAFT00000046901"; oId "CUFF.138073.1"; tss_id "TSS140178";
+38	Cufflinks	exon	2783645	2783763	.	-	.	gene_id "XLOC_090915"; transcript_id "TCONS_00232764"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000029799"; nearest_ref "ENSCAFT00000046901"; oId "CUFF.138073.1"; tss_id "TSS140178";
+38	Cufflinks	exon	15695051	15695252	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231946"; class_code "u"; exon_number "1"; oId "CUFF.139024.5"; tss_id "TSS139733";
+38	Cufflinks	exon	15749663	15749741	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231946"; class_code "u"; exon_number "2"; oId "CUFF.139024.5"; tss_id "TSS139733";
+38	Cufflinks	exon	15798860	15799144	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231946"; class_code "u"; exon_number "3"; oId "CUFF.139024.5"; tss_id "TSS139733";
+38	Cufflinks	exon	21562407	21563077	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232224"; class_code "u"; exon_number "1"; oId "CUFF.139571.4"; tss_id "TSS139889";
+38	Cufflinks	exon	21563543	21565291	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232224"; class_code "u"; exon_number "2"; oId "CUFF.139571.4"; tss_id "TSS139889";
+38	Cufflinks	exon	1185983	1186691	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232600"; class_code "u"; exon_number "1"; oId "CUFF.137647.20"; tss_id "TSS140087";
 38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232600"; class_code "u"; exon_number "2"; oId "CUFF.137647.20"; tss_id "TSS140087";
-38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "2"; oId "CUFF.137647.22"; tss_id "TSS140087";
-38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "2"; oId "CUFF.137647.21"; tss_id "TSS140087";
-38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "2"; oId "CUFF.137647.11"; tss_id "TSS140087";
-38	Cufflinks	exon	1186818	1187098	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232595"; class_code "u"; exon_number "2"; oId "CUFF.137647.14"; tss_id "TSS140087";
-38	Cufflinks	exon	1187119	1187262	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "2"; oId "CUFF.137647.15"; tss_id "TSS140087";
-38	Cufflinks	exon	1187119	1187262	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "3"; oId "CUFF.137647.18"; tss_id "TSS140087";
-38	Cufflinks	exon	1187119	1187262	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "3"; oId "CUFF.137647.22"; tss_id "TSS140087";
-38	Cufflinks	exon	1187119	1187262	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "3"; oId "CUFF.137647.21"; tss_id "TSS140087";
-38	Cufflinks	exon	1187119	1187262	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "3"; oId "CUFF.137647.11"; tss_id "TSS140087";
-38	Cufflinks	exon	1187119	1187286	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232594"; class_code "u"; exon_number "2"; oId "CUFF.137647.19"; tss_id "TSS140087";
-38	Cufflinks	exon	1187119	1187286	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "3"; oId "CUFF.137647.17"; tss_id "TSS140087";
 38	Cufflinks	exon	1187119	1187286	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232600"; class_code "u"; exon_number "3"; oId "CUFF.137647.20"; tss_id "TSS140087";
-38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232593"; class_code "u"; exon_number "3"; oId "CUFF.137647.13"; tss_id "TSS140087";
-38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232594"; class_code "u"; exon_number "3"; oId "CUFF.137647.19"; tss_id "TSS140087";
-38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232595"; class_code "u"; exon_number "3"; oId "CUFF.137647.14"; tss_id "TSS140087";
-38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "3"; oId "CUFF.137647.15"; tss_id "TSS140087";
-38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232597"; class_code "u"; exon_number "2"; oId "CUFF.137647.16"; tss_id "TSS140087";
-38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "4"; oId "CUFF.137647.17"; tss_id "TSS140087";
-38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "4"; oId "CUFF.137647.18"; tss_id "TSS140087";
 38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232600"; class_code "u"; exon_number "4"; oId "CUFF.137647.20"; tss_id "TSS140087";
-38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "4"; oId "CUFF.137647.22"; tss_id "TSS140087";
-38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232602"; class_code "u"; exon_number "2"; oId "CUFF.137647.12"; tss_id "TSS140087";
-38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "4"; oId "CUFF.137647.21"; tss_id "TSS140087";
-38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "4"; oId "CUFF.137647.11"; tss_id "TSS140087";
-38	Cufflinks	exon	12097749	12120113	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232918"; class_code "u"; exon_number "1"; oId "CUFF.139445.18"; tss_id "TSS140249";
-38	Cufflinks	exon	12097749	12120113	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232919"; class_code "u"; exon_number "1"; oId "CUFF.139445.17"; tss_id "TSS140250";
-38	Cufflinks	exon	12097749	12120113	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232920"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000025753"; nearest_ref "ENSCAFT00000040036"; oId "CUFF.139445.19"; tss_id "TSS140252";
-38	Cufflinks	exon	12121888	12122173	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232918"; class_code "u"; exon_number "2"; oId "CUFF.139445.18"; tss_id "TSS140249";
-38	Cufflinks	exon	12124030	12124067	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232919"; class_code "u"; exon_number "2"; oId "CUFF.139445.17"; tss_id "TSS140250";
-38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "4"; oId "CUFF.137647.15"; tss_id "TSS140087";
-38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232597"; class_code "u"; exon_number "3"; oId "CUFF.137647.16"; tss_id "TSS140087";
-38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "5"; oId "CUFF.137647.17"; tss_id "TSS140087";
-38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "5"; oId "CUFF.137647.18"; tss_id "TSS140087";
 38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232600"; class_code "u"; exon_number "5"; oId "CUFF.137647.20"; tss_id "TSS140087";
-38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232602"; class_code "u"; exon_number "3"; oId "CUFF.137647.12"; tss_id "TSS140087";
-38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "5"; oId "CUFF.137647.21"; tss_id "TSS140087";
-38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232593"; class_code "u"; exon_number "4"; oId "CUFF.137647.13"; tss_id "TSS140087";
+38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232600"; class_code "u"; exon_number "6"; oId "CUFF.137647.20"; tss_id "TSS140087";
+38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232600"; class_code "u"; exon_number "7"; oId "CUFF.137647.20"; tss_id "TSS140087";
+38	Cufflinks	exon	16935916	16936937	.	-	.	gene_id "XLOC_090998"; transcript_id "TCONS_00233083"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013601"; nearest_ref "ENSCAFT00000021557"; oId "CUFF.139414.1"; tss_id "TSS140352";
+38	Cufflinks	exon	16937174	16937361	.	-	.	gene_id "XLOC_090998"; transcript_id "TCONS_00233083"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013601"; nearest_ref "ENSCAFT00000021557"; oId "CUFF.139414.1"; tss_id "TSS140352";
+38	Cufflinks	exon	20696662	20699085	.	-	.	gene_id "XLOC_091025"; transcript_id "TCONS_00233261"; class_code "u"; exon_number "1"; oId "CUFF.139514.1"; tss_id "TSS140439";
+38	Cufflinks	exon	20700833	20702200	.	-	.	gene_id "XLOC_091025"; transcript_id "TCONS_00233261"; class_code "u"; exon_number "2"; oId "CUFF.139514.1"; tss_id "TSS140439";
+38	Cufflinks	exon	19604004	19604029	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232088"; class_code "u"; exon_number "1"; oId "CUFF.139381.4"; tss_id "TSS139807";
+38	Cufflinks	exon	19604096	19604336	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232088"; class_code "u"; exon_number "2"; oId "CUFF.139381.4"; tss_id "TSS139807";
+38	Cufflinks	exon	19604843	19604983	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232088"; class_code "u"; exon_number "3"; oId "CUFF.139381.4"; tss_id "TSS139807";
+38	Cufflinks	exon	19605120	19609707	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232088"; class_code "u"; exon_number "4"; oId "CUFF.139381.4"; tss_id "TSS139807";
+38	Cufflinks	exon	16359285	16359312	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231956"; class_code "u"; exon_number "1"; oId "CUFF.139051.3"; tss_id "TSS139742";
+38	Cufflinks	exon	16359823	16359900	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231956"; class_code "u"; exon_number "2"; oId "CUFF.139051.3"; tss_id "TSS139742";
+38	Cufflinks	exon	16359984	16360247	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231956"; class_code "u"; exon_number "3"; oId "CUFF.139051.3"; tss_id "TSS139742";
+38	Cufflinks	exon	18588191	18595876	.	-	.	gene_id "XLOC_091011"; transcript_id "TCONS_00233145"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000013289"; nearest_ref "ENSCAFT00000021112"; oId "CUFF.139436.16"; tss_id "TSS140386";
+38	Cufflinks	exon	18698205	18699132	.	-	.	gene_id "XLOC_091011"; transcript_id "TCONS_00233145"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000013289"; nearest_ref "ENSCAFT00000021112"; oId "CUFF.139436.16"; tss_id "TSS140386";
+38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232398"; class_code "u"; exon_number "1"; oId "CUFF.139985.1"; tss_id "TSS139981";
+38	Cufflinks	exon	22859974	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232398"; class_code "u"; exon_number "2"; oId "CUFF.139985.1"; tss_id "TSS139981";
+38	Cufflinks	exon	22862511	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232398"; class_code "u"; exon_number "3"; oId "CUFF.139985.1"; tss_id "TSS139981";
+38	Cufflinks	exon	12361118	12361614	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232926"; class_code "u"; exon_number "1"; oId "CUFF.139445.21"; tss_id "TSS140261";
+38	Cufflinks	exon	12394615	12394745	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232926"; class_code "u"; exon_number "2"; oId "CUFF.139445.21"; tss_id "TSS140261";
+38	Cufflinks	exon	1185983	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232594"; class_code "u"; exon_number "1"; oId "CUFF.137647.19"; tss_id "TSS140087";
+38	Cufflinks	exon	1187119	1187286	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232594"; class_code "u"; exon_number "2"; oId "CUFF.137647.19"; tss_id "TSS140087";
+38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232594"; class_code "u"; exon_number "3"; oId "CUFF.137647.19"; tss_id "TSS140087";
 38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232594"; class_code "u"; exon_number "4"; oId "CUFF.137647.19"; tss_id "TSS140087";
-38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232595"; class_code "u"; exon_number "4"; oId "CUFF.137647.14"; tss_id "TSS140087";
-38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "5"; oId "CUFF.137647.15"; tss_id "TSS140087";
-38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232597"; class_code "u"; exon_number "4"; oId "CUFF.137647.16"; tss_id "TSS140087";
-38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "6"; oId "CUFF.137647.17"; tss_id "TSS140087";
-38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "6"; oId "CUFF.137647.18"; tss_id "TSS140087";
-38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232600"; class_code "u"; exon_number "6"; oId "CUFF.137647.20"; tss_id "TSS140087";
-38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "5"; oId "CUFF.137647.22"; tss_id "TSS140087";
-38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232602"; class_code "u"; exon_number "4"; oId "CUFF.137647.12"; tss_id "TSS140087";
-38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "6"; oId "CUFF.137647.21"; tss_id "TSS140087";
-38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "5"; oId "CUFF.137647.11"; tss_id "TSS140087";
-38	Cufflinks	exon	1217209	1217387	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232593"; class_code "u"; exon_number "5"; oId "CUFF.137647.13"; tss_id "TSS140087";
 38	Cufflinks	exon	1217209	1217391	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232594"; class_code "u"; exon_number "5"; oId "CUFF.137647.19"; tss_id "TSS140087";
-38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232595"; class_code "u"; exon_number "5"; oId "CUFF.137647.14"; tss_id "TSS140087";
-38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "6"; oId "CUFF.137647.15"; tss_id "TSS140087";
-38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232597"; class_code "u"; exon_number "5"; oId "CUFF.137647.16"; tss_id "TSS140087";
-38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232598"; class_code "u"; exon_number "7"; oId "CUFF.137647.17"; tss_id "TSS140087";
-38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232599"; class_code "u"; exon_number "7"; oId "CUFF.137647.18"; tss_id "TSS140087";
-38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232600"; class_code "u"; exon_number "7"; oId "CUFF.137647.20"; tss_id "TSS140087";
-38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "6"; oId "CUFF.137647.22"; tss_id "TSS140087";
-38	Cufflinks	exon	1217209	1217444	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232602"; class_code "u"; exon_number "5"; oId "CUFF.137647.12"; tss_id "TSS140087";
-38	Cufflinks	exon	1217209	1217444	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "7"; oId "CUFF.137647.21"; tss_id "TSS140087";
-38	Cufflinks	exon	1217209	1217456	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "6"; oId "CUFF.137647.11"; tss_id "TSS140087";
-38	Cufflinks	exon	12255937	12256028	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232920"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000025753"; nearest_ref "ENSCAFT00000040036"; oId "CUFF.139445.19"; tss_id "TSS140252";
-38	Cufflinks	exon	12264257	12264330	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232920"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000025753"; nearest_ref "ENSCAFT00000040036"; oId "CUFF.139445.19"; tss_id "TSS140252";
-38	Cufflinks	exon	12361118	12361614	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232925"; class_code "u"; exon_number "1"; oId "CUFF.139445.20"; tss_id "TSS140256";
-38	Cufflinks	exon	12361118	12361614	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232926"; class_code "u"; exon_number "1"; oId "CUFF.139445.21"; tss_id "TSS140261";
-38	Cufflinks	exon	12382739	12382934	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232925"; class_code "u"; exon_number "2"; oId "CUFF.139445.20"; tss_id "TSS140256";
-38	Cufflinks	exon	12394615	12394745	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232926"; class_code "u"; exon_number "2"; oId "CUFF.139445.21"; tss_id "TSS140261";
+38	Cufflinks	exon	21372659	21373763	.	+	.	gene_id "XLOC_090777"; transcript_id "TCONS_00232178"; class_code "u"; exon_number "1"; oId "CUFF.139582.1"; tss_id "TSS139862";
+38	Cufflinks	exon	21375077	21375125	.	+	.	gene_id "XLOC_090777"; transcript_id "TCONS_00232178"; class_code "u"; exon_number "2"; oId "CUFF.139582.1"; tss_id "TSS139862";
+38	Cufflinks	exon	23501729	23502882	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232439"; class_code "u"; exon_number "1"; oId "CUFF.139777.7"; tss_id "TSS140007";
+38	Cufflinks	exon	23503116	23503657	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232439"; class_code "u"; exon_number "2"; oId "CUFF.139777.7"; tss_id "TSS140007";
+38	Cufflinks	exon	7355075	7355258	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231758"; class_code "u"; exon_number "1"; oId "CUFF.138465.2"; tss_id "TSS139635";
+38	Cufflinks	exon	7355758	7355834	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231758"; class_code "u"; exon_number "2"; oId "CUFF.138465.2"; tss_id "TSS139635";
+38	Cufflinks	exon	7435442	7435524	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231758"; class_code "u"; exon_number "3"; oId "CUFF.138465.2"; tss_id "TSS139635";
+38	Cufflinks	exon	7435626	7436483	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231758"; class_code "u"; exon_number "4"; oId "CUFF.138465.2"; tss_id "TSS139635";
+38	Cufflinks	exon	7469977	7470325	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231758"; class_code "u"; exon_number "5"; oId "CUFF.138465.2"; tss_id "TSS139635";
+38	Cufflinks	exon	21859927	21862318	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233540"; class_code "u"; exon_number "1"; oId "CUFF.139665.3"; tss_id "TSS140542";
+38	Cufflinks	exon	21862699	21862860	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233540"; class_code "u"; exon_number "2"; oId "CUFF.139665.3"; tss_id "TSS140542";
+38	Cufflinks	exon	21863481	21865412	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233540"; class_code "u"; exon_number "3"; oId "CUFF.139665.3"; tss_id "TSS140542";
+38	Cufflinks	exon	21865525	21867420	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233540"; class_code "u"; exon_number "4"; oId "CUFF.139665.3"; tss_id "TSS140542";
+38	Cufflinks	exon	13670518	13670789	.	+	.	gene_id "XLOC_090685"; transcript_id "TCONS_00231831"; class_code "u"; exon_number "1"; oId "CUFF.138874.1"; tss_id "TSS139677";
+38	Cufflinks	exon	13674013	13674152	.	+	.	gene_id "XLOC_090685"; transcript_id "TCONS_00231831"; class_code "u"; exon_number "2"; oId "CUFF.138874.1"; tss_id "TSS139677";
+38	Cufflinks	exon	13690160	13690420	.	+	.	gene_id "XLOC_090685"; transcript_id "TCONS_00231831"; class_code "u"; exon_number "3"; oId "CUFF.138874.1"; tss_id "TSS139677";
+38	Cufflinks	exon	1716514	1717223	.	-	.	gene_id "XLOC_090886"; transcript_id "TCONS_00232636"; class_code "u"; exon_number "1"; oId "CUFF.137754.1"; tss_id "TSS140104";
+38	Cufflinks	exon	1725470	1725518	.	-	.	gene_id "XLOC_090886"; transcript_id "TCONS_00232636"; class_code "u"; exon_number "2"; oId "CUFF.137754.1"; tss_id "TSS140104";
+38	Cufflinks	exon	8177029	8178688	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232880"; class_code "u"; exon_number "1"; oId "CUFF.139147.1"; tss_id "TSS140231";
+38	Cufflinks	exon	8179884	8179977	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232880"; class_code "u"; exon_number "2"; oId "CUFF.139147.1"; tss_id "TSS140231";
+38	Cufflinks	exon	8180418	8180893	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232880"; class_code "u"; exon_number "3"; oId "CUFF.139147.1"; tss_id "TSS140231";
+38	Cufflinks	exon	10661011	10663355	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232894"; class_code "u"; exon_number "1"; oId "CUFF.138746.2"; tss_id "TSS140242";
+38	Cufflinks	exon	10664410	10664532	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232894"; class_code "u"; exon_number "2"; oId "CUFF.138746.2"; tss_id "TSS140242";
+38	Cufflinks	exon	10665521	10665896	.	-	.	gene_id "XLOC_090951"; transcript_id "TCONS_00232894"; class_code "u"; exon_number "3"; oId "CUFF.138746.2"; tss_id "TSS140242";
+38	Cufflinks	exon	16570512	16570674	.	+	.	gene_id "XLOC_090730"; transcript_id "TCONS_00231962"; class_code "u"; exon_number "1"; oId "CUFF.139039.1"; tss_id "TSS139747";
+38	Cufflinks	exon	16577969	16578165	.	+	.	gene_id "XLOC_090730"; transcript_id "TCONS_00231962"; class_code "u"; exon_number "2"; oId "CUFF.139039.1"; tss_id "TSS139747";
+38	Cufflinks	exon	16578320	16579623	.	+	.	gene_id "XLOC_090730"; transcript_id "TCONS_00231962"; class_code "u"; exon_number "3"; oId "CUFF.139039.1"; tss_id "TSS139747";
+38	Cufflinks	exon	9575653	9575724	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232886"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000029859"; nearest_ref "ENSCAFT00000048330"; oId "CUFF.138979.2"; tss_id "TSS140237";
+38	Cufflinks	exon	9604520	9604668	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232886"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000029859"; nearest_ref "ENSCAFT00000048330"; oId "CUFF.138979.2"; tss_id "TSS140237";
+38	Cufflinks	exon	9880332	9880397	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232886"; class_code "o"; exon_number "3"; gene_name "ENSCAFG00000029859"; nearest_ref "ENSCAFT00000048330"; oId "CUFF.138979.2"; tss_id "TSS140237";
+38	Cufflinks	exon	9945834	9946205	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232886"; class_code "o"; exon_number "4"; gene_name "ENSCAFG00000029859"; nearest_ref "ENSCAFT00000048330"; oId "CUFF.138979.2"; tss_id "TSS140237";
+38	Cufflinks	exon	5246575	5247618	.	-	.	gene_id "XLOC_090921"; transcript_id "TCONS_00232805"; class_code "u"; exon_number "1"; oId "CUFF.138092.2"; tss_id "TSS140189";
+38	Cufflinks	exon	5279865	5280590	.	-	.	gene_id "XLOC_090921"; transcript_id "TCONS_00232805"; class_code "u"; exon_number "2"; oId "CUFF.138092.2"; tss_id "TSS140189";
+38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232662"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.1"; tss_id "TSS140119";
+38	Cufflinks	exon	1929437	1929574	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232662"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.1"; tss_id "TSS140119";
+38	Cufflinks	exon	22197693	22201770	.	-	.	gene_id "XLOC_091073"; transcript_id "TCONS_00233580"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011857"; nearest_ref "ENSCAFT00000018829"; oId "CUFF.139685.2"; tss_id "TSS140566";
+38	Cufflinks	exon	22201944	22201997	.	-	.	gene_id "XLOC_091073"; transcript_id "TCONS_00233580"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011857"; nearest_ref "ENSCAFT00000018829"; oId "CUFF.139685.2"; tss_id "TSS140566";
+38	Cufflinks	exon	22820029	22822122	.	-	.	gene_id "XLOC_091093"; transcript_id "TCONS_00233634"; class_code "u"; exon_number "1"; oId "CUFF.139749.2"; tss_id "TSS140604";
+38	Cufflinks	exon	22822590	22823165	.	-	.	gene_id "XLOC_091093"; transcript_id "TCONS_00233634"; class_code "u"; exon_number "2"; oId "CUFF.139749.2"; tss_id "TSS140604";
+38	Cufflinks	exon	2216210	2217313	.	-	.	gene_id "XLOC_090905"; transcript_id "TCONS_00232716"; class_code "u"; exon_number "1"; oId "CUFF.137759.4"; tss_id "TSS140151";
+38	Cufflinks	exon	2217731	2217774	.	-	.	gene_id "XLOC_090905"; transcript_id "TCONS_00232716"; class_code "u"; exon_number "2"; oId "CUFF.137759.4"; tss_id "TSS140151";
+38	Cufflinks	exon	2218479	2218571	.	-	.	gene_id "XLOC_090905"; transcript_id "TCONS_00232716"; class_code "u"; exon_number "3"; oId "CUFF.137759.4"; tss_id "TSS140151";
+38	Cufflinks	exon	21794765	21794865	.	+	.	gene_id "XLOC_090795"; transcript_id "TCONS_00232276"; class_code "u"; exon_number "1"; oId "CUFF.139654.2"; tss_id "TSS139908";
+38	Cufflinks	exon	21795848	21796314	.	+	.	gene_id "XLOC_090795"; transcript_id "TCONS_00232276"; class_code "u"; exon_number "2"; oId "CUFF.139654.2"; tss_id "TSS139908";
+38	Cufflinks	exon	14418308	14418903	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232967"; class_code "u"; exon_number "1"; oId "CUFF.138859.1"; tss_id "TSS140290";
+38	Cufflinks	exon	14419981	14420367	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232967"; class_code "u"; exon_number "2"; oId "CUFF.138859.1"; tss_id "TSS140290";
+38	Cufflinks	exon	14523972	14524126	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232967"; class_code "u"; exon_number "3"; oId "CUFF.138859.1"; tss_id "TSS140290";
+38	Cufflinks	exon	14525393	14525504	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232967"; class_code "u"; exon_number "4"; oId "CUFF.138859.1"; tss_id "TSS140290";
+38	Cufflinks	exon	13726230	13729407	.	-	.	gene_id "XLOC_090965"; transcript_id "TCONS_00232954"; class_code "u"; exon_number "1"; oId "CUFF.138813.1"; tss_id "TSS140279";
+38	Cufflinks	exon	13729503	13729700	.	-	.	gene_id "XLOC_090965"; transcript_id "TCONS_00232954"; class_code "u"; exon_number "2"; oId "CUFF.138813.1"; tss_id "TSS140279";
+38	Cufflinks	exon	13766902	13766972	.	-	.	gene_id "XLOC_090965"; transcript_id "TCONS_00232954"; class_code "u"; exon_number "3"; oId "CUFF.138813.1"; tss_id "TSS140279";
+38	Cufflinks	exon	23707147	23708085	.	+	.	gene_id "XLOC_090854"; transcript_id "TCONS_00232456"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000031030"; nearest_ref "ENSCAFT00000045878"; oId "CUFF.140178.2"; tss_id "TSS140016";
+38	Cufflinks	exon	23708560	23709187	.	+	.	gene_id "XLOC_090854"; transcript_id "TCONS_00232456"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000031030"; nearest_ref "ENSCAFT00000045878"; oId "CUFF.140178.2"; tss_id "TSS140016";
+38	Cufflinks	exon	2324264	2324538	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
+38	Cufflinks	exon	2324780	2324906	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
+38	Cufflinks	exon	2328992	2329094	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
+38	Cufflinks	exon	2334571	2334824	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
+38	Cufflinks	exon	2340139	2340270	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
+38	Cufflinks	exon	2340736	2342639	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
 38	Cufflinks	exon	12824234	12824277	.	+	.	gene_id "XLOC_090678"; transcript_id "TCONS_00231794"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010781"; nearest_ref "ENSCAFT00000017151"; oId "CUFF.139242.1"; tss_id "TSS139658";
 38	Cufflinks	exon	12833421	12833494	.	+	.	gene_id "XLOC_090678"; transcript_id "TCONS_00231794"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010781"; nearest_ref "ENSCAFT00000017151"; oId "CUFF.139242.1"; tss_id "TSS139658";
 38	Cufflinks	exon	12840554	12840708	.	+	.	gene_id "XLOC_090678"; transcript_id "TCONS_00231794"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010781"; nearest_ref "ENSCAFT00000017151"; oId "CUFF.139242.1"; tss_id "TSS139658";
 38	Cufflinks	exon	12842162	12842402	.	+	.	gene_id "XLOC_090678"; transcript_id "TCONS_00231794"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010781"; nearest_ref "ENSCAFT00000017151"; oId "CUFF.139242.1"; tss_id "TSS139658";
-38	Cufflinks	exon	1296740	1297292	.	+	.	gene_id "XLOC_090615"; transcript_id "TCONS_00231491"; class_code "u"; exon_number "1"; oId "CUFF.137637.1"; tss_id "TSS139509";
-38	Cufflinks	exon	13158450	13160274	.	-	.	gene_id "XLOC_090960"; transcript_id "TCONS_00232947"; class_code "u"; exon_number "1"; oId "CUFF.138781.1"; tss_id "TSS140272";
-38	Cufflinks	exon	13176178	13176277	.	-	.	gene_id "XLOC_090960"; transcript_id "TCONS_00232947"; class_code "u"; exon_number "2"; oId "CUFF.138781.1"; tss_id "TSS140272";
-38	Cufflinks	exon	1322420	1322461	.	+	.	gene_id "XLOC_090615"; transcript_id "TCONS_00231491"; class_code "u"; exon_number "2"; oId "CUFF.137637.1"; tss_id "TSS139509";
-38	Cufflinks	exon	13336795	13340728	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232948"; class_code "u"; exon_number "1"; oId "CUFF.138809.2"; tss_id "TSS140273";
-38	Cufflinks	exon	13336795	13340728	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232949"; class_code "u"; exon_number "1"; oId "CUFF.138809.1"; tss_id "TSS140274";
-38	Cufflinks	exon	13342125	13342206	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232948"; class_code "u"; exon_number "2"; oId "CUFF.138809.2"; tss_id "TSS140273";
-38	Cufflinks	exon	13342125	13342206	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232949"; class_code "u"; exon_number "2"; oId "CUFF.138809.1"; tss_id "TSS140274";
-38	Cufflinks	exon	13361261	13361531	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232948"; class_code "u"; exon_number "3"; oId "CUFF.138809.2"; tss_id "TSS140273";
-38	Cufflinks	exon	13375525	13375609	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232949"; class_code "u"; exon_number "3"; oId "CUFF.138809.1"; tss_id "TSS140274";
-38	Cufflinks	exon	13377041	13377345	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232949"; class_code "u"; exon_number "4"; oId "CUFF.138809.1"; tss_id "TSS140274";
-38	Cufflinks	exon	13531698	13531757	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231828"; class_code "u"; exon_number "1"; oId "CUFF.138852.1"; tss_id "TSS139675";
-38	Cufflinks	exon	13531714	13531757	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231829"; class_code "u"; exon_number "1"; oId "CUFF.138852.2"; tss_id "TSS139675";
-38	Cufflinks	exon	13531850	13532071	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231828"; class_code "u"; exon_number "2"; oId "CUFF.138852.1"; tss_id "TSS139675";
-38	Cufflinks	exon	13532634	13533533	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231828"; class_code "u"; exon_number "3"; oId "CUFF.138852.1"; tss_id "TSS139675";
-38	Cufflinks	exon	13532639	13532750	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231829"; class_code "u"; exon_number "2"; oId "CUFF.138852.2"; tss_id "TSS139675";
-38	Cufflinks	exon	13534001	13534880	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231829"; class_code "u"; exon_number "3"; oId "CUFF.138852.2"; tss_id "TSS139675";
-38	Cufflinks	exon	13646626	13648701	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232952"; class_code "u"; exon_number "1"; oId "CUFF.138873.2"; tss_id "TSS140277";
-38	Cufflinks	exon	13646626	13648701	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "1"; oId "CUFF.138873.1"; tss_id "TSS140278";
-38	Cufflinks	exon	13649335	13649446	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232952"; class_code "u"; exon_number "2"; oId "CUFF.138873.2"; tss_id "TSS140277";
-38	Cufflinks	exon	13649335	13649446	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "2"; oId "CUFF.138873.1"; tss_id "TSS140278";
-38	Cufflinks	exon	13649803	13649981	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "3"; oId "CUFF.138873.1"; tss_id "TSS140278";
-38	Cufflinks	exon	13651540	13651679	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232952"; class_code "u"; exon_number "3"; oId "CUFF.138873.2"; tss_id "TSS140277";
-38	Cufflinks	exon	13651540	13651679	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "4"; oId "CUFF.138873.1"; tss_id "TSS140278";
-38	Cufflinks	exon	13656338	13656515	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232952"; class_code "u"; exon_number "4"; oId "CUFF.138873.2"; tss_id "TSS140277";
-38	Cufflinks	exon	13656338	13656532	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "5"; oId "CUFF.138873.1"; tss_id "TSS140278";
-38	Cufflinks	exon	13670518	13670789	.	+	.	gene_id "XLOC_090685"; transcript_id "TCONS_00231831"; class_code "u"; exon_number "1"; oId "CUFF.138874.1"; tss_id "TSS139677";
-38	Cufflinks	exon	13671671	13671846	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "6"; oId "CUFF.138873.1"; tss_id "TSS140278";
-38	Cufflinks	exon	13674013	13674152	.	+	.	gene_id "XLOC_090685"; transcript_id "TCONS_00231831"; class_code "u"; exon_number "2"; oId "CUFF.138874.1"; tss_id "TSS139677";
-38	Cufflinks	exon	13682934	13682984	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "7"; oId "CUFF.138873.1"; tss_id "TSS140278";
-38	Cufflinks	exon	13690160	13690420	.	+	.	gene_id "XLOC_090685"; transcript_id "TCONS_00231831"; class_code "u"; exon_number "3"; oId "CUFF.138874.1"; tss_id "TSS139677";
-38	Cufflinks	exon	13726230	13729407	.	-	.	gene_id "XLOC_090965"; transcript_id "TCONS_00232954"; class_code "u"; exon_number "1"; oId "CUFF.138813.1"; tss_id "TSS140279";
-38	Cufflinks	exon	137279	137596	.	-	.	gene_id "XLOC_090860"; transcript_id "TCONS_00232464"; class_code "u"; exon_number "1"; oId "CUFF.137600.1"; tss_id "TSS140022";
-38	Cufflinks	exon	13729503	13729700	.	-	.	gene_id "XLOC_090965"; transcript_id "TCONS_00232954"; class_code "u"; exon_number "2"; oId "CUFF.138813.1"; tss_id "TSS140279";
-38	Cufflinks	exon	13766902	13766972	.	-	.	gene_id "XLOC_090965"; transcript_id "TCONS_00232954"; class_code "u"; exon_number "3"; oId "CUFF.138813.1"; tss_id "TSS140279";
-38	Cufflinks	exon	13767077	13767107	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "1"; oId "CUFF.138970.1"; tss_id "TSS140280";
-38	Cufflinks	exon	13775829	13775860	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "1"; oId "CUFF.138970.2"; tss_id "TSS140280";
-38	Cufflinks	exon	13777990	13779860	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "1"; oId "CUFF.138970.3"; tss_id "TSS140280";
-38	Cufflinks	exon	13781608	13781739	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "2"; oId "CUFF.138970.3"; tss_id "TSS140280";
-38	Cufflinks	exon	13819972	13820072	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "2"; oId "CUFF.138970.2"; tss_id "TSS140280";
-38	Cufflinks	exon	13843886	13844017	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "2"; oId "CUFF.138970.1"; tss_id "TSS140280";
-38	Cufflinks	exon	13843886	13844017	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "3"; oId "CUFF.138970.2"; tss_id "TSS140280";
-38	Cufflinks	exon	13843886	13844017	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "3"; oId "CUFF.138970.3"; tss_id "TSS140280";
-38	Cufflinks	exon	13911338	13911607	.	-	.	gene_id "XLOC_090967"; transcript_id "TCONS_00232958"; class_code "u"; exon_number "1"; oId "CUFF.138978.1"; tss_id "TSS140283";
-38	Cufflinks	exon	13912756	13912992	.	-	.	gene_id "XLOC_090967"; transcript_id "TCONS_00232958"; class_code "u"; exon_number "2"; oId "CUFF.138978.1"; tss_id "TSS140283";
-38	Cufflinks	exon	13946036	13946104	.	-	.	gene_id "XLOC_090967"; transcript_id "TCONS_00232958"; class_code "u"; exon_number "3"; oId "CUFF.138978.1"; tss_id "TSS140283";
-38	Cufflinks	exon	13946994	13947036	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232959"; class_code "u"; exon_number "1"; oId "CUFF.138970.4"; tss_id "TSS140281";
-38	Cufflinks	exon	14030575	14030648	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232960"; class_code "u"; exon_number "1"; oId "CUFF.138970.5"; tss_id "TSS140282";
-38	Cufflinks	exon	14050108	14050155	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232959"; class_code "u"; exon_number "2"; oId "CUFF.138970.4"; tss_id "TSS140281";
-38	Cufflinks	exon	14050396	14050465	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "3"; oId "CUFF.138970.1"; tss_id "TSS140280";
-38	Cufflinks	exon	14050396	14050465	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "4"; oId "CUFF.138970.2"; tss_id "TSS140280";
-38	Cufflinks	exon	14050396	14050465	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "4"; oId "CUFF.138970.3"; tss_id "TSS140280";
-38	Cufflinks	exon	14050396	14050465	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232959"; class_code "u"; exon_number "3"; oId "CUFF.138970.4"; tss_id "TSS140281";
-38	Cufflinks	exon	14050396	14050465	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232960"; class_code "u"; exon_number "2"; oId "CUFF.138970.5"; tss_id "TSS140282";
-38	Cufflinks	exon	14077181	14077299	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "4"; oId "CUFF.138970.1"; tss_id "TSS140280";
-38	Cufflinks	exon	14077181	14077299	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "5"; oId "CUFF.138970.2"; tss_id "TSS140280";
-38	Cufflinks	exon	14077181	14077299	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "5"; oId "CUFF.138970.3"; tss_id "TSS140280";
-38	Cufflinks	exon	14077181	14077299	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232959"; class_code "u"; exon_number "4"; oId "CUFF.138970.4"; tss_id "TSS140281";
-38	Cufflinks	exon	14077181	14077299	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232960"; class_code "u"; exon_number "3"; oId "CUFF.138970.5"; tss_id "TSS140282";
-38	Cufflinks	exon	14078950	14079177	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232959"; class_code "u"; exon_number "5"; oId "CUFF.138970.4"; tss_id "TSS140281";
-38	Cufflinks	exon	14098539	14098634	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "5"; oId "CUFF.138970.1"; tss_id "TSS140280";
-38	Cufflinks	exon	14098539	14098634	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "6"; oId "CUFF.138970.2"; tss_id "TSS140280";
-38	Cufflinks	exon	14098539	14098634	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "6"; oId "CUFF.138970.3"; tss_id "TSS140280";
-38	Cufflinks	exon	14098539	14098634	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232960"; class_code "u"; exon_number "4"; oId "CUFF.138970.5"; tss_id "TSS140282";
-38	Cufflinks	exon	14099377	14099444	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232960"; class_code "u"; exon_number "5"; oId "CUFF.138970.5"; tss_id "TSS140282";
-38	Cufflinks	exon	14100364	14100524	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232955"; class_code "u"; exon_number "6"; oId "CUFF.138970.1"; tss_id "TSS140280";
-38	Cufflinks	exon	14100364	14100524	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232956"; class_code "u"; exon_number "7"; oId "CUFF.138970.2"; tss_id "TSS140280";
-38	Cufflinks	exon	14100364	14100524	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "7"; oId "CUFF.138970.3"; tss_id "TSS140280";
-38	Cufflinks	exon	14149067	14149369	.	-	.	gene_id "XLOC_090968"; transcript_id "TCONS_00232961"; class_code "u"; exon_number "1"; oId "CUFF.138821.1"; tss_id "TSS140284";
-38	Cufflinks	exon	14149594	14150270	.	-	.	gene_id "XLOC_090968"; transcript_id "TCONS_00232961"; class_code "u"; exon_number "2"; oId "CUFF.138821.1"; tss_id "TSS140284";
-38	Cufflinks	exon	14171877	14172134	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231841"; class_code "u"; exon_number "1"; oId "CUFF.138853.1"; tss_id "TSS139682";
-38	Cufflinks	exon	14182942	14183155	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231841"; class_code "u"; exon_number "2"; oId "CUFF.138853.1"; tss_id "TSS139682";
-38	Cufflinks	exon	14188197	14188432	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231842"; class_code "u"; exon_number "1"; oId "CUFF.138853.2"; tss_id "TSS139683";
-38	Cufflinks	exon	14188197	14188739	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231843"; class_code "u"; exon_number "1"; oId "CUFF.138853.3"; tss_id "TSS139683";
-38	Cufflinks	exon	14188862	14188941	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231841"; class_code "u"; exon_number "3"; oId "CUFF.138853.1"; tss_id "TSS139682";
-38	Cufflinks	exon	14188862	14188941	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231842"; class_code "u"; exon_number "2"; oId "CUFF.138853.2"; tss_id "TSS139683";
-38	Cufflinks	exon	14188862	14188941	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231843"; class_code "u"; exon_number "2"; oId "CUFF.138853.3"; tss_id "TSS139683";
-38	Cufflinks	exon	14191749	14193112	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231841"; class_code "u"; exon_number "4"; oId "CUFF.138853.1"; tss_id "TSS139682";
-38	Cufflinks	exon	14191749	14193112	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231842"; class_code "u"; exon_number "3"; oId "CUFF.138853.2"; tss_id "TSS139683";
-38	Cufflinks	exon	14191749	14193112	.	+	.	gene_id "XLOC_090688"; transcript_id "TCONS_00231843"; class_code "u"; exon_number "3"; oId "CUFF.138853.3"; tss_id "TSS139683";
-38	Cufflinks	exon	14197051	14197208	.	+	.	gene_id "XLOC_090689"; transcript_id "TCONS_00231844"; class_code "u"; exon_number "1"; oId "CUFF.138857.1"; tss_id "TSS139684";
-38	Cufflinks	exon	14197716	14197890	.	+	.	gene_id "XLOC_090689"; transcript_id "TCONS_00231844"; class_code "u"; exon_number "2"; oId "CUFF.138857.1"; tss_id "TSS139684";
-38	Cufflinks	exon	14200601	14203671	.	+	.	gene_id "XLOC_090689"; transcript_id "TCONS_00231844"; class_code "u"; exon_number "3"; oId "CUFF.138857.1"; tss_id "TSS139684";
-38	Cufflinks	exon	14324285	14330808	.	+	.	gene_id "XLOC_090690"; transcript_id "TCONS_00231845"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000021604"; nearest_ref "ENSCAFT00000033711"; oId "CUFF.138877.1"; tss_id "TSS139685";
-38	Cufflinks	exon	14330738	14330808	.	+	.	gene_id "XLOC_090690"; transcript_id "TCONS_00231846"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000021604"; nearest_ref "ENSCAFT00000033711"; oId "CUFF.138877.2"; tss_id "TSS139686";
-38	Cufflinks	exon	14342010	14349179	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232964"; class_code "u"; exon_number "1"; oId "CUFF.138879.2"; tss_id "TSS140287";
 38	Cufflinks	exon	14342010	14349179	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232965"; class_code "u"; exon_number "1"; oId "CUFF.138879.3"; tss_id "TSS140288";
-38	Cufflinks	exon	14342010	14349179	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232966"; class_code "u"; exon_number "1"; oId "CUFF.138879.1"; tss_id "TSS140289";
-38	Cufflinks	exon	14343297	14360478	.	+	.	gene_id "XLOC_090690"; transcript_id "TCONS_00231845"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000021604"; nearest_ref "ENSCAFT00000033711"; oId "CUFF.138877.1"; tss_id "TSS139685";
-38	Cufflinks	exon	14357755	14357891	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232966"; class_code "u"; exon_number "2"; oId "CUFF.138879.1"; tss_id "TSS140289";
-38	Cufflinks	exon	14357755	14358297	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232964"; class_code "u"; exon_number "2"; oId "CUFF.138879.2"; tss_id "TSS140287";
-38	Cufflinks	exon	14360579	14371848	.	+	.	gene_id "XLOC_090690"; transcript_id "TCONS_00231845"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000021604"; nearest_ref "ENSCAFT00000033711"; oId "CUFF.138877.1"; tss_id "TSS139685";
-38	Cufflinks	exon	14361040	14371848	.	+	.	gene_id "XLOC_090690"; transcript_id "TCONS_00231846"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000021604"; nearest_ref "ENSCAFT00000033711"; oId "CUFF.138877.2"; tss_id "TSS139686";
 38	Cufflinks	exon	14363958	14364169	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232965"; class_code "u"; exon_number "2"; oId "CUFF.138879.3"; tss_id "TSS140288";
-38	Cufflinks	exon	14367017	14367060	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232966"; class_code "u"; exon_number "3"; oId "CUFF.138879.1"; tss_id "TSS140289";
-38	Cufflinks	exon	14373097	14373259	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232966"; class_code "u"; exon_number "4"; oId "CUFF.138879.1"; tss_id "TSS140289";
-38	Cufflinks	exon	14376087	14376314	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232966"; class_code "u"; exon_number "5"; oId "CUFF.138879.1"; tss_id "TSS140289";
-38	Cufflinks	exon	14376371	14376402	.	+	.	gene_id "XLOC_090691"; transcript_id "TCONS_00231848"; class_code "u"; exon_number "1"; oId "CUFF.138839.1"; tss_id "TSS139688";
-38	Cufflinks	exon	14379626	14379742	.	+	.	gene_id "XLOC_090691"; transcript_id "TCONS_00231848"; class_code "u"; exon_number "2"; oId "CUFF.138839.1"; tss_id "TSS139688";
-38	Cufflinks	exon	14387885	14388016	.	+	.	gene_id "XLOC_090691"; transcript_id "TCONS_00231848"; class_code "u"; exon_number "3"; oId "CUFF.138839.1"; tss_id "TSS139688";
-38	Cufflinks	exon	14418308	14418903	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232967"; class_code "u"; exon_number "1"; oId "CUFF.138859.1"; tss_id "TSS140290";
-38	Cufflinks	exon	14419981	14420367	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232967"; class_code "u"; exon_number "2"; oId "CUFF.138859.1"; tss_id "TSS140290";
-38	Cufflinks	exon	14497116	14497243	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232968"; class_code "u"; exon_number "1"; oId "CUFF.138859.2"; tss_id "TSS140291";
-38	Cufflinks	exon	14523972	14524126	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232967"; class_code "u"; exon_number "3"; oId "CUFF.138859.1"; tss_id "TSS140290";
-38	Cufflinks	exon	14523972	14524380	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232968"; class_code "u"; exon_number "2"; oId "CUFF.138859.2"; tss_id "TSS140291";
-38	Cufflinks	exon	14525393	14525504	.	-	.	gene_id "XLOC_090971"; transcript_id "TCONS_00232967"; class_code "u"; exon_number "4"; oId "CUFF.138859.1"; tss_id "TSS140290";
-38	Cufflinks	exon	14557140	14557412	.	-	.	gene_id "XLOC_090972"; transcript_id "TCONS_00232969"; class_code "u"; exon_number "1"; oId "CUFF.138844.1"; tss_id "TSS140292";
-38	Cufflinks	exon	14557584	14557670	.	-	.	gene_id "XLOC_090972"; transcript_id "TCONS_00232969"; class_code "u"; exon_number "2"; oId "CUFF.138844.1"; tss_id "TSS140292";
-38	Cufflinks	exon	14599434	14600412	.	-	.	gene_id "XLOC_090972"; transcript_id "TCONS_00232969"; class_code "u"; exon_number "3"; oId "CUFF.138844.1"; tss_id "TSS140292";
-38	Cufflinks	exon	14620552	14621960	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232971"; class_code "u"; exon_number "1"; oId "CUFF.138906.1"; tss_id "TSS140294";
-38	Cufflinks	exon	14620552	14621960	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232972"; class_code "u"; exon_number "1"; oId "CUFF.138906.2"; tss_id "TSS140294";
-38	Cufflinks	exon	14620552	14621960	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232973"; class_code "u"; exon_number "1"; oId "CUFF.138906.3"; tss_id "TSS140295";
-38	Cufflinks	exon	14620552	14621960	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232975"; class_code "u"; exon_number "1"; oId "CUFF.138906.5"; tss_id "TSS140295";
-38	Cufflinks	exon	14620552	14624208	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232974"; class_code "u"; exon_number "1"; oId "CUFF.138906.4"; tss_id "TSS140295";
-38	Cufflinks	exon	14622096	14622341	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232972"; class_code "u"; exon_number "2"; oId "CUFF.138906.2"; tss_id "TSS140294";
-38	Cufflinks	exon	14622096	14623007	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232971"; class_code "u"; exon_number "2"; oId "CUFF.138906.1"; tss_id "TSS140294";
-38	Cufflinks	exon	14622096	14624208	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232973"; class_code "u"; exon_number "2"; oId "CUFF.138906.3"; tss_id "TSS140295";
-38	Cufflinks	exon	14622096	14624208	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232975"; class_code "u"; exon_number "2"; oId "CUFF.138906.5"; tss_id "TSS140295";
-38	Cufflinks	exon	14622460	14624208	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232972"; class_code "u"; exon_number "3"; oId "CUFF.138906.2"; tss_id "TSS140294";
-38	Cufflinks	exon	14623625	14624208	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232971"; class_code "u"; exon_number "3"; oId "CUFF.138906.1"; tss_id "TSS140294";
-38	Cufflinks	exon	14624298	14625151	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232971"; class_code "u"; exon_number "4"; oId "CUFF.138906.1"; tss_id "TSS140294";
-38	Cufflinks	exon	14624298	14625151	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232972"; class_code "u"; exon_number "4"; oId "CUFF.138906.2"; tss_id "TSS140294";
-38	Cufflinks	exon	14625580	14625754	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232974"; class_code "u"; exon_number "2"; oId "CUFF.138906.4"; tss_id "TSS140295";
-38	Cufflinks	exon	14625580	14625754	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232975"; class_code "u"; exon_number "3"; oId "CUFF.138906.5"; tss_id "TSS140295";
-38	Cufflinks	exon	14625580	14625774	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232973"; class_code "u"; exon_number "3"; oId "CUFF.138906.3"; tss_id "TSS140295";
-38	Cufflinks	exon	14658326	14658545	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232973"; class_code "u"; exon_number "4"; oId "CUFF.138906.3"; tss_id "TSS140295";
-38	Cufflinks	exon	14658326	14658545	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232974"; class_code "u"; exon_number "3"; oId "CUFF.138906.4"; tss_id "TSS140295";
-38	Cufflinks	exon	14658326	14658545	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232975"; class_code "u"; exon_number "4"; oId "CUFF.138906.5"; tss_id "TSS140295";
-38	Cufflinks	exon	14664976	14665265	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232973"; class_code "u"; exon_number "5"; oId "CUFF.138906.3"; tss_id "TSS140295";
-38	Cufflinks	exon	14664976	14665265	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232974"; class_code "u"; exon_number "4"; oId "CUFF.138906.4"; tss_id "TSS140295";
-38	Cufflinks	exon	14664997	14665265	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232975"; class_code "u"; exon_number "5"; oId "CUFF.138906.5"; tss_id "TSS140295";
-38	Cufflinks	exon	14681653	14681831	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231852"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.1"; tss_id "TSS139692";
-38	Cufflinks	exon	14681653	14681831	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231853"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.2"; tss_id "TSS139692";
-38	Cufflinks	exon	14691519	14691664	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231852"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.1"; tss_id "TSS139692";
-38	Cufflinks	exon	14691519	14691664	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231853"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.2"; tss_id "TSS139692";
-38	Cufflinks	exon	14701961	14702043	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231852"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.1"; tss_id "TSS139692";
-38	Cufflinks	exon	14701961	14702043	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231853"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.2"; tss_id "TSS139692";
-38	Cufflinks	exon	14703271	14711179	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231852"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.1"; tss_id "TSS139692";
-38	Cufflinks	exon	14711884	14712071	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231853"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.2"; tss_id "TSS139692";
-38	Cufflinks	exon	14713462	14714407	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231853"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.2"; tss_id "TSS139692";
-38	Cufflinks	exon	15025680	15026170	.	+	.	gene_id "XLOC_090700"; transcript_id "TCONS_00231870"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011125"; nearest_ref "ENSCAFT00000017715"; oId "CUFF.139355.2"; tss_id "TSS139700";
-38	Cufflinks	exon	15025680	15026170	.	+	.	gene_id "XLOC_090700"; transcript_id "TCONS_00231871"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011125"; nearest_ref "ENSCAFT00000017715"; oId "CUFF.139355.1"; tss_id "TSS139700";
-38	Cufflinks	exon	15031573	15031853	.	+	.	gene_id "XLOC_090700"; transcript_id "TCONS_00231870"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011125"; nearest_ref "ENSCAFT00000017715"; oId "CUFF.139355.2"; tss_id "TSS139700";
-38	Cufflinks	exon	15038322	15038399	.	+	.	gene_id "XLOC_090700"; transcript_id "TCONS_00231871"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011125"; nearest_ref "ENSCAFT00000017715"; oId "CUFF.139355.1"; tss_id "TSS139700";
-38	Cufflinks	exon	15223309	15223741	.	-	.	gene_id "XLOC_090985"; transcript_id "TCONS_00233030"; class_code "u"; exon_number "1"; oId "CUFF.138904.1"; tss_id "TSS140323";
-38	Cufflinks	exon	15224036	15224291	.	-	.	gene_id "XLOC_090985"; transcript_id "TCONS_00233030"; class_code "u"; exon_number "2"; oId "CUFF.138904.1"; tss_id "TSS140323";
-38	Cufflinks	exon	15385775	15386819	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231907"; class_code "u"; exon_number "1"; oId "CUFF.138911.3"; tss_id "TSS139710";
-38	Cufflinks	exon	15385775	15386819	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231909"; class_code "u"; exon_number "1"; oId "CUFF.138911.4"; tss_id "TSS139710";
-38	Cufflinks	exon	15385775	15387460	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231908"; class_code "u"; exon_number "1"; oId "CUFF.138911.1"; tss_id "TSS139710";
-38	Cufflinks	exon	15385775	15387460	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231910"; class_code "u"; exon_number "1"; oId "CUFF.138911.2"; tss_id "TSS139710";
-38	Cufflinks	exon	15387359	15387460	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231907"; class_code "u"; exon_number "2"; oId "CUFF.138911.3"; tss_id "TSS139710";
-38	Cufflinks	exon	15387359	15387460	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231909"; class_code "u"; exon_number "2"; oId "CUFF.138911.4"; tss_id "TSS139710";
-38	Cufflinks	exon	15388147	15388448	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231907"; class_code "u"; exon_number "3"; oId "CUFF.138911.3"; tss_id "TSS139710";
-38	Cufflinks	exon	15390507	15390631	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231908"; class_code "u"; exon_number "2"; oId "CUFF.138911.1"; tss_id "TSS139710";
-38	Cufflinks	exon	15390507	15390631	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231909"; class_code "u"; exon_number "3"; oId "CUFF.138911.4"; tss_id "TSS139710";
-38	Cufflinks	exon	15390507	15390631	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231910"; class_code "u"; exon_number "2"; oId "CUFF.138911.2"; tss_id "TSS139710";
-38	Cufflinks	exon	15392302	15393571	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231908"; class_code "u"; exon_number "3"; oId "CUFF.138911.1"; tss_id "TSS139710";
-38	Cufflinks	exon	15392302	15393571	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231909"; class_code "u"; exon_number "4"; oId "CUFF.138911.4"; tss_id "TSS139710";
-38	Cufflinks	exon	15409535	15409842	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231910"; class_code "u"; exon_number "3"; oId "CUFF.138911.2"; tss_id "TSS139710";
-38	Cufflinks	exon	1552646	1552684	.	+	.	gene_id "XLOC_090618"; transcript_id "TCONS_00231522"; class_code "u"; exon_number "1"; oId "CUFF.137640.1"; tss_id "TSS139518";
-38	Cufflinks	exon	15550307	15551545	.	-	.	gene_id "XLOC_090989"; transcript_id "TCONS_00233036"; class_code "u"; exon_number "1"; oId "CUFF.138955.1"; tss_id "TSS140328";
-38	Cufflinks	exon	15550307	15551545	.	-	.	gene_id "XLOC_090989"; transcript_id "TCONS_00233037"; class_code "u"; exon_number "1"; oId "CUFF.138955.2"; tss_id "TSS140328";
-38	Cufflinks	exon	15552281	15552503	.	-	.	gene_id "XLOC_090989"; transcript_id "TCONS_00233037"; class_code "u"; exon_number "2"; oId "CUFF.138955.2"; tss_id "TSS140328";
-38	Cufflinks	exon	15552281	15553248	.	-	.	gene_id "XLOC_090989"; transcript_id "TCONS_00233036"; class_code "u"; exon_number "2"; oId "CUFF.138955.1"; tss_id "TSS140328";
-38	Cufflinks	exon	15553290	15553318	.	-	.	gene_id "XLOC_090989"; transcript_id "TCONS_00233037"; class_code "u"; exon_number "3"; oId "CUFF.138955.2"; tss_id "TSS140328";
-38	Cufflinks	exon	1556694	1558232	.	+	.	gene_id "XLOC_090618"; transcript_id "TCONS_00231522"; class_code "u"; exon_number "2"; oId "CUFF.137640.1"; tss_id "TSS139518";
-38	Cufflinks	exon	15677388	15677508	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231942"; class_code "u"; exon_number "1"; oId "CUFF.139024.1"; tss_id "TSS139731";
-38	Cufflinks	exon	15677388	15677508	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231943"; class_code "u"; exon_number "1"; oId "CUFF.139024.2"; tss_id "TSS139731";
-38	Cufflinks	exon	15677388	15677508	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231944"; class_code "u"; exon_number "1"; oId "CUFF.139024.3"; tss_id "TSS139731";
-38	Cufflinks	exon	15684558	15684725	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231942"; class_code "u"; exon_number "2"; oId "CUFF.139024.1"; tss_id "TSS139731";
-38	Cufflinks	exon	15684908	15687117	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231942"; class_code "u"; exon_number "3"; oId "CUFF.139024.1"; tss_id "TSS139731";
-38	Cufflinks	exon	15694920	15695252	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231945"; class_code "u"; exon_number "1"; oId "CUFF.139024.4"; tss_id "TSS139732";
-38	Cufflinks	exon	15695051	15695252	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231946"; class_code "u"; exon_number "1"; oId "CUFF.139024.5"; tss_id "TSS139733";
-38	Cufflinks	exon	15704556	15704705	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231943"; class_code "u"; exon_number "2"; oId "CUFF.139024.2"; tss_id "TSS139731";
-38	Cufflinks	exon	15724630	15724845	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231947"; class_code "u"; exon_number "1"; oId "CUFF.139024.6"; tss_id "TSS139734";
-38	Cufflinks	exon	15736259	15737263	.	+	.	gene_id "XLOC_090721"; transcript_id "TCONS_00231948"; class_code "u"; exon_number "1"; oId "CUFF.139025.1"; tss_id "TSS139735";
-38	Cufflinks	exon	15741463	15741503	.	+	.	gene_id "XLOC_090721"; transcript_id "TCONS_00231948"; class_code "u"; exon_number "2"; oId "CUFF.139025.1"; tss_id "TSS139735";
-38	Cufflinks	exon	15749663	15749741	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231944"; class_code "u"; exon_number "2"; oId "CUFF.139024.3"; tss_id "TSS139731";
-38	Cufflinks	exon	15749663	15749741	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231945"; class_code "u"; exon_number "2"; oId "CUFF.139024.4"; tss_id "TSS139732";
-38	Cufflinks	exon	15749663	15749741	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231946"; class_code "u"; exon_number "2"; oId "CUFF.139024.5"; tss_id "TSS139733";
-38	Cufflinks	exon	15749663	15749741	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231947"; class_code "u"; exon_number "2"; oId "CUFF.139024.6"; tss_id "TSS139734";
-38	Cufflinks	exon	15791584	15791788	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231945"; class_code "u"; exon_number "3"; oId "CUFF.139024.4"; tss_id "TSS139732";
-38	Cufflinks	exon	15798860	15799144	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231943"; class_code "u"; exon_number "3"; oId "CUFF.139024.2"; tss_id "TSS139731";
-38	Cufflinks	exon	15798860	15799144	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231944"; class_code "u"; exon_number "3"; oId "CUFF.139024.3"; tss_id "TSS139731";
-38	Cufflinks	exon	15798860	15799144	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231945"; class_code "u"; exon_number "4"; oId "CUFF.139024.4"; tss_id "TSS139732";
-38	Cufflinks	exon	15798860	15799144	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231946"; class_code "u"; exon_number "3"; oId "CUFF.139024.5"; tss_id "TSS139733";
-38	Cufflinks	exon	15798860	15799144	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231947"; class_code "u"; exon_number "3"; oId "CUFF.139024.6"; tss_id "TSS139734";
-38	Cufflinks	exon	16006662	16006809	.	+	.	gene_id "XLOC_090723"; transcript_id "TCONS_00231950"; class_code "u"; exon_number "1"; oId "CUFF.138964.1"; tss_id "TSS139737";
-38	Cufflinks	exon	16056040	16056570	.	+	.	gene_id "XLOC_090723"; transcript_id "TCONS_00231950"; class_code "u"; exon_number "2"; oId "CUFF.138964.1"; tss_id "TSS139737";
-38	Cufflinks	exon	16233866	16234215	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231951"; class_code "u"; exon_number "1"; oId "CUFF.139090.1"; tss_id "TSS139738";
-38	Cufflinks	exon	16235018	16235146	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231951"; class_code "u"; exon_number "2"; oId "CUFF.139090.1"; tss_id "TSS139738";
-38	Cufflinks	exon	16235035	16235146	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231952"; class_code "u"; exon_number "1"; oId "CUFF.139090.2"; tss_id "TSS139739";
-38	Cufflinks	exon	16237698	16238628	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231952"; class_code "u"; exon_number "2"; oId "CUFF.139090.2"; tss_id "TSS139739";
-38	Cufflinks	exon	16237698	16242403	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231951"; class_code "u"; exon_number "3"; oId "CUFF.139090.1"; tss_id "TSS139738";
-38	Cufflinks	exon	16239630	16242403	.	+	.	gene_id "XLOC_090724"; transcript_id "TCONS_00231952"; class_code "u"; exon_number "3"; oId "CUFF.139090.2"; tss_id "TSS139739";
-38	Cufflinks	exon	16317356	16317667	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "1"; oId "CUFF.139050.1"; tss_id "TSS139740";
-38	Cufflinks	exon	16329120	16329247	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "2"; oId "CUFF.139050.1"; tss_id "TSS139740";
-38	Cufflinks	exon	16331120	16331219	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "3"; oId "CUFF.139050.1"; tss_id "TSS139740";
-38	Cufflinks	exon	16331439	16331577	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "4"; oId "CUFF.139050.1"; tss_id "TSS139740";
-38	Cufflinks	exon	16333656	16333747	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "5"; oId "CUFF.139050.1"; tss_id "TSS139740";
-38	Cufflinks	exon	16334487	16336248	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "6"; oId "CUFF.139050.1"; tss_id "TSS139740";
-38	Cufflinks	exon	16339470	16339496	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231954"; class_code "u"; exon_number "1"; oId "CUFF.139051.1"; tss_id "TSS139741";
-38	Cufflinks	exon	16339470	16339496	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231955"; class_code "u"; exon_number "1"; oId "CUFF.139051.2"; tss_id "TSS139741";
-38	Cufflinks	exon	16350683	16350811	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231954"; class_code "u"; exon_number "2"; oId "CUFF.139051.1"; tss_id "TSS139741";
-38	Cufflinks	exon	16350683	16350811	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231955"; class_code "u"; exon_number "2"; oId "CUFF.139051.2"; tss_id "TSS139741";
-38	Cufflinks	exon	16359285	16359312	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231956"; class_code "u"; exon_number "1"; oId "CUFF.139051.3"; tss_id "TSS139742";
-38	Cufflinks	exon	16359823	16359900	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231956"; class_code "u"; exon_number "2"; oId "CUFF.139051.3"; tss_id "TSS139742";
-38	Cufflinks	exon	16359984	16360156	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231954"; class_code "u"; exon_number "3"; oId "CUFF.139051.1"; tss_id "TSS139741";
-38	Cufflinks	exon	16359984	16360247	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231956"; class_code "u"; exon_number "3"; oId "CUFF.139051.3"; tss_id "TSS139742";
-38	Cufflinks	exon	16371249	16373514	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231954"; class_code "u"; exon_number "4"; oId "CUFF.139051.1"; tss_id "TSS139741";
-38	Cufflinks	exon	16371249	16373514	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231955"; class_code "u"; exon_number "3"; oId "CUFF.139051.2"; tss_id "TSS139741";
 38	Cufflinks	exon	16416187	16416330	.	+	.	gene_id "XLOC_090727"; transcript_id "TCONS_00231957"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000013637"; nearest_ref "ENSCAFT00000021622"; oId "CUFF.139057.1"; tss_id "TSS139743";
-38	Cufflinks	exon	16416187	16416330	.	+	.	gene_id "XLOC_090727"; transcript_id "TCONS_00231958"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000013637"; nearest_ref "ENSCAFT00000021622"; oId "CUFF.139057.2"; tss_id "TSS139743";
 38	Cufflinks	exon	16446254	16446434	.	+	.	gene_id "XLOC_090727"; transcript_id "TCONS_00231957"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000013637"; nearest_ref "ENSCAFT00000021622"; oId "CUFF.139057.1"; tss_id "TSS139743";
-38	Cufflinks	exon	16446254	16446434	.	+	.	gene_id "XLOC_090727"; transcript_id "TCONS_00231958"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000013637"; nearest_ref "ENSCAFT00000021622"; oId "CUFF.139057.2"; tss_id "TSS139743";
 38	Cufflinks	exon	16447675	16447862	.	+	.	gene_id "XLOC_090727"; transcript_id "TCONS_00231957"; class_code "o"; exon_number "3"; gene_name "ENSCAFG00000013637"; nearest_ref "ENSCAFT00000021622"; oId "CUFF.139057.1"; tss_id "TSS139743";
-38	Cufflinks	exon	16462049	16462310	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233052"; class_code "u"; exon_number "1"; oId "CUFF.139060.1"; tss_id "TSS140339";
+38	Cufflinks	exon	22542375	22542439	.	+	.	gene_id "XLOC_090822"; transcript_id "TCONS_00232392"; class_code "u"; exon_number "1"; oId "CUFF.139729.2"; tss_id "TSS139975";
+38	Cufflinks	exon	22553570	22553693	.	+	.	gene_id "XLOC_090822"; transcript_id "TCONS_00232392"; class_code "u"; exon_number "2"; oId "CUFF.139729.2"; tss_id "TSS139975";
+38	Cufflinks	exon	22554683	22555006	.	+	.	gene_id "XLOC_090822"; transcript_id "TCONS_00232392"; class_code "u"; exon_number "3"; oId "CUFF.139729.2"; tss_id "TSS139975";
+38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232402"; class_code "u"; exon_number "1"; oId "CUFF.139985.5"; tss_id "TSS139981";
+38	Cufflinks	exon	22859984	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232402"; class_code "u"; exon_number "2"; oId "CUFF.139985.5"; tss_id "TSS139981";
+38	Cufflinks	exon	22862511	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232402"; class_code "u"; exon_number "3"; oId "CUFF.139985.5"; tss_id "TSS139981";
+38	Cufflinks	exon	916839	916982	.	+	.	gene_id "XLOC_090608"; transcript_id "TCONS_00231457"; class_code "u"; exon_number "1"; oId "CUFF.138206.1"; tss_id "TSS139495";
+38	Cufflinks	exon	921030	921143	.	+	.	gene_id "XLOC_090608"; transcript_id "TCONS_00231457"; class_code "u"; exon_number "2"; oId "CUFF.138206.1"; tss_id "TSS139495";
+38	Cufflinks	exon	931061	931154	.	+	.	gene_id "XLOC_090608"; transcript_id "TCONS_00231457"; class_code "u"; exon_number "3"; oId "CUFF.138206.1"; tss_id "TSS139495";
 38	Cufflinks	exon	16462049	16462310	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233053"; class_code "u"; exon_number "1"; oId "CUFF.139060.2"; tss_id "TSS140339";
-38	Cufflinks	exon	16462049	16462310	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233054"; class_code "u"; exon_number "1"; oId "CUFF.139060.3"; tss_id "TSS140339";
-38	Cufflinks	exon	16462545	16462668	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233054"; class_code "u"; exon_number "2"; oId "CUFF.139060.3"; tss_id "TSS140339";
-38	Cufflinks	exon	16462545	16463003	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233052"; class_code "u"; exon_number "2"; oId "CUFF.139060.1"; tss_id "TSS140339";
 38	Cufflinks	exon	16462972	16463019	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233053"; class_code "u"; exon_number "2"; oId "CUFF.139060.2"; tss_id "TSS140339";
-38	Cufflinks	exon	16462972	16463028	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233054"; class_code "u"; exon_number "3"; oId "CUFF.139060.3"; tss_id "TSS140339";
-38	Cufflinks	exon	16464240	16464412	.	+	.	gene_id "XLOC_090727"; transcript_id "TCONS_00231958"; class_code "o"; exon_number "3"; gene_name "ENSCAFG00000013637"; nearest_ref "ENSCAFT00000021622"; oId "CUFF.139057.2"; tss_id "TSS139743";
-38	Cufflinks	exon	1646610	1646872	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231531"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.1"; tss_id "TSS139523";
-38	Cufflinks	exon	1646611	1646872	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231532"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.2"; tss_id "TSS139523";
-38	Cufflinks	exon	1646751	1646872	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231533"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.3"; tss_id "TSS139524";
-38	Cufflinks	exon	16468046	16468347	.	+	.	gene_id "XLOC_090727"; transcript_id "TCONS_00231958"; class_code "o"; exon_number "4"; gene_name "ENSCAFG00000013637"; nearest_ref "ENSCAFT00000021622"; oId "CUFF.139057.2"; tss_id "TSS139743";
-38	Cufflinks	exon	16475585	16475994	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233055"; class_code "u"; exon_number "1"; oId "CUFF.139062.1"; tss_id "TSS140340";
-38	Cufflinks	exon	16475585	16475994	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233056"; class_code "u"; exon_number "1"; oId "CUFF.139062.2"; tss_id "TSS140341";
-38	Cufflinks	exon	16491482	16491615	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233055"; class_code "u"; exon_number "2"; oId "CUFF.139062.1"; tss_id "TSS140340";
-38	Cufflinks	exon	16503207	16503235	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233057"; class_code "u"; exon_number "1"; oId "CUFF.139062.3"; tss_id "TSS140341";
-38	Cufflinks	exon	16521012	16521125	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233056"; class_code "u"; exon_number "2"; oId "CUFF.139062.2"; tss_id "TSS140341";
-38	Cufflinks	exon	16521012	16521125	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233057"; class_code "u"; exon_number "2"; oId "CUFF.139062.3"; tss_id "TSS140341";
-38	Cufflinks	exon	16522730	16522795	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233057"; class_code "u"; exon_number "3"; oId "CUFF.139062.3"; tss_id "TSS140341";
-38	Cufflinks	exon	16530020	16530180	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233056"; class_code "u"; exon_number "3"; oId "CUFF.139062.2"; tss_id "TSS140341";
-38	Cufflinks	exon	16530020	16530180	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233057"; class_code "u"; exon_number "4"; oId "CUFF.139062.3"; tss_id "TSS140341";
-38	Cufflinks	exon	16530336	16530599	.	+	.	gene_id "XLOC_090729"; transcript_id "TCONS_00231961"; class_code "u"; exon_number "1"; oId "CUFF.139042.1"; tss_id "TSS139746";
-38	Cufflinks	exon	16531197	16531365	.	+	.	gene_id "XLOC_090729"; transcript_id "TCONS_00231961"; class_code "u"; exon_number "2"; oId "CUFF.139042.1"; tss_id "TSS139746";
-38	Cufflinks	exon	16547679	16548345	.	+	.	gene_id "XLOC_090729"; transcript_id "TCONS_00231961"; class_code "u"; exon_number "3"; oId "CUFF.139042.1"; tss_id "TSS139746";
-38	Cufflinks	exon	16570512	16570674	.	+	.	gene_id "XLOC_090730"; transcript_id "TCONS_00231962"; class_code "u"; exon_number "1"; oId "CUFF.139039.1"; tss_id "TSS139747";
-38	Cufflinks	exon	16577969	16578165	.	+	.	gene_id "XLOC_090730"; transcript_id "TCONS_00231962"; class_code "u"; exon_number "2"; oId "CUFF.139039.1"; tss_id "TSS139747";
-38	Cufflinks	exon	16578320	16579623	.	+	.	gene_id "XLOC_090730"; transcript_id "TCONS_00231962"; class_code "u"; exon_number "3"; oId "CUFF.139039.1"; tss_id "TSS139747";
-38	Cufflinks	exon	1659090	1659115	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231537"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.4"; tss_id "TSS139525";
-38	Cufflinks	exon	1659097	1659115	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231538"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.5"; tss_id "TSS139525";
-38	Cufflinks	exon	1659097	1659115	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231539"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.6"; tss_id "TSS139525";
-38	Cufflinks	exon	1659097	1659115	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231540"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.7"; tss_id "TSS139525";
-38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231531"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.1"; tss_id "TSS139523";
-38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231532"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.2"; tss_id "TSS139523";
-38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231533"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.3"; tss_id "TSS139524";
-38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231537"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.4"; tss_id "TSS139525";
-38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231538"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.5"; tss_id "TSS139525";
-38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231539"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.6"; tss_id "TSS139525";
-38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231540"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.7"; tss_id "TSS139525";
-38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231531"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.1"; tss_id "TSS139523";
-38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231532"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.2"; tss_id "TSS139523";
-38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231533"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.3"; tss_id "TSS139524";
-38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231537"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.4"; tss_id "TSS139525";
-38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231538"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.5"; tss_id "TSS139525";
-38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231539"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.6"; tss_id "TSS139525";
-38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231540"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.7"; tss_id "TSS139525";
-38	Cufflinks	exon	16693325	16693491	.	-	.	gene_id "XLOC_090993"; transcript_id "TCONS_00233058"; class_code "u"; exon_number "1"; oId "CUFF.139055.1"; tss_id "TSS140342";
-38	Cufflinks	exon	16716496	16716585	.	-	.	gene_id "XLOC_090993"; transcript_id "TCONS_00233058"; class_code "u"; exon_number "2"; oId "CUFF.139055.1"; tss_id "TSS140342";
-38	Cufflinks	exon	16718717	16718964	.	-	.	gene_id "XLOC_090993"; transcript_id "TCONS_00233058"; class_code "u"; exon_number "3"; oId "CUFF.139055.1"; tss_id "TSS140342";
-38	Cufflinks	exon	1671930	1674716	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231533"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.3"; tss_id "TSS139524";
-38	Cufflinks	exon	1671930	1674716	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231538"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.5"; tss_id "TSS139525";
-38	Cufflinks	exon	1676534	1676549	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231539"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.6"; tss_id "TSS139525";
-38	Cufflinks	exon	16778547	16778884	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233060"; class_code "u"; exon_number "1"; oId "CUFF.139054.1"; tss_id "TSS140344";
-38	Cufflinks	exon	16778547	16778953	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233059"; class_code "u"; exon_number "1"; oId "CUFF.139054.2"; tss_id "TSS140343";
-38	Cufflinks	exon	16779181	16779289	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233059"; class_code "u"; exon_number "2"; oId "CUFF.139054.2"; tss_id "TSS140343";
-38	Cufflinks	exon	16779181	16779289	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233060"; class_code "u"; exon_number "2"; oId "CUFF.139054.1"; tss_id "TSS140344";
-38	Cufflinks	exon	16781014	16781154	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233060"; class_code "u"; exon_number "3"; oId "CUFF.139054.1"; tss_id "TSS140344";
-38	Cufflinks	exon	16781014	16781375	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233059"; class_code "u"; exon_number "3"; oId "CUFF.139054.2"; tss_id "TSS140343";
-38	Cufflinks	exon	16781752	16781786	.	-	.	gene_id "XLOC_090994"; transcript_id "TCONS_00233060"; class_code "u"; exon_number "4"; oId "CUFF.139054.1"; tss_id "TSS140344";
-38	Cufflinks	exon	1684969	1685040	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231531"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.1"; tss_id "TSS139523";
-38	Cufflinks	exon	1684969	1685040	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231537"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.4"; tss_id "TSS139525";
-38	Cufflinks	exon	16858582	16858767	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231964"; class_code "u"; exon_number "1"; oId "CUFF.139121.1"; tss_id "TSS139749";
-38	Cufflinks	exon	16858594	16858767	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231965"; class_code "u"; exon_number "1"; oId "CUFF.139121.2"; tss_id "TSS139749";
-38	Cufflinks	exon	16858594	16858767	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231966"; class_code "u"; exon_number "1"; oId "CUFF.139121.3"; tss_id "TSS139749";
-38	Cufflinks	exon	16859262	16860441	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231967"; class_code "u"; exon_number "1"; oId "CUFF.139121.4"; tss_id "TSS139750";
-38	Cufflinks	exon	16859936	16860441	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231964"; class_code "u"; exon_number "2"; oId "CUFF.139121.1"; tss_id "TSS139749";
-38	Cufflinks	exon	16866188	16866275	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231965"; class_code "u"; exon_number "2"; oId "CUFF.139121.2"; tss_id "TSS139749";
-38	Cufflinks	exon	16866188	16870239	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231964"; class_code "u"; exon_number "3"; oId "CUFF.139121.1"; tss_id "TSS139749";
-38	Cufflinks	exon	16866188	16870239	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231966"; class_code "u"; exon_number "2"; oId "CUFF.139121.3"; tss_id "TSS139749";
-38	Cufflinks	exon	16866188	16870239	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231967"; class_code "u"; exon_number "2"; oId "CUFF.139121.4"; tss_id "TSS139750";
-38	Cufflinks	exon	16867262	16870239	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231965"; class_code "u"; exon_number "3"; oId "CUFF.139121.2"; tss_id "TSS139749";
-38	Cufflinks	exon	169006	169131	.	-	.	gene_id "XLOC_090860"; transcript_id "TCONS_00232464"; class_code "u"; exon_number "2"; oId "CUFF.137600.1"; tss_id "TSS140022";
-38	Cufflinks	exon	16935916	16936937	.	-	.	gene_id "XLOC_090998"; transcript_id "TCONS_00233083"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013601"; nearest_ref "ENSCAFT00000021557"; oId "CUFF.139414.1"; tss_id "TSS140352";
-38	Cufflinks	exon	16937174	16937361	.	-	.	gene_id "XLOC_090998"; transcript_id "TCONS_00233083"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013601"; nearest_ref "ENSCAFT00000021557"; oId "CUFF.139414.1"; tss_id "TSS140352";
-38	Cufflinks	exon	169388	169496	.	-	.	gene_id "XLOC_090860"; transcript_id "TCONS_00232464"; class_code "u"; exon_number "3"; oId "CUFF.137600.1"; tss_id "TSS140022";
-38	Cufflinks	exon	1702405	1702725	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231532"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.2"; tss_id "TSS139523";
-38	Cufflinks	exon	1702405	1702725	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231540"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.7"; tss_id "TSS139525";
-38	Cufflinks	exon	17050836	17050972	.	+	.	gene_id "XLOC_090737"; transcript_id "TCONS_00232010"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013502"; nearest_ref "ENSCAFT00000021419"; oId "CUFF.139069.1"; tss_id "TSS139765";
-38	Cufflinks	exon	17051166	17051625	.	+	.	gene_id "XLOC_090737"; transcript_id "TCONS_00232010"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013502"; nearest_ref "ENSCAFT00000021419"; oId "CUFF.139069.1"; tss_id "TSS139765";
-38	Cufflinks	exon	1716514	1717223	.	-	.	gene_id "XLOC_090886"; transcript_id "TCONS_00232636"; class_code "u"; exon_number "1"; oId "CUFF.137754.1"; tss_id "TSS140104";
-38	Cufflinks	exon	1725470	1725518	.	-	.	gene_id "XLOC_090886"; transcript_id "TCONS_00232636"; class_code "u"; exon_number "2"; oId "CUFF.137754.1"; tss_id "TSS140104";
-38	Cufflinks	exon	17374920	17377148	.	+	.	gene_id "XLOC_090738"; transcript_id "TCONS_00232020"; class_code "u"; exon_number "1"; oId "CUFF.139138.10"; tss_id "TSS139770";
-38	Cufflinks	exon	17377556	17378400	.	+	.	gene_id "XLOC_090738"; transcript_id "TCONS_00232020"; class_code "u"; exon_number "2"; oId "CUFF.139138.10"; tss_id "TSS139770";
-38	Cufflinks	exon	17693492	17695902	.	+	.	gene_id "XLOC_090742"; transcript_id "TCONS_00232052"; class_code "u"; exon_number "1"; oId "CUFF.139103.1"; tss_id "TSS139787";
-38	Cufflinks	exon	17696516	17696631	.	+	.	gene_id "XLOC_090742"; transcript_id "TCONS_00232052"; class_code "u"; exon_number "2"; oId "CUFF.139103.1"; tss_id "TSS139787";
-38	Cufflinks	exon	17769751	17769862	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
-38	Cufflinks	exon	17769751	17769862	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
-38	Cufflinks	exon	17776387	17776462	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "1"; oId "CUFF.139126.3"; tss_id "TSS139789";
-38	Cufflinks	exon	17776393	17776462	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "1"; oId "CUFF.139126.4"; tss_id "TSS139789";
-38	Cufflinks	exon	17776393	17776462	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "1"; oId "CUFF.139126.5"; tss_id "TSS139789";
-38	Cufflinks	exon	17776393	17776462	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "1"; oId "CUFF.139126.6"; tss_id "TSS139789";
-38	Cufflinks	exon	17776393	17776462	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "1"; oId "CUFF.139126.7"; tss_id "TSS139789";
-38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
-38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
-38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "2"; oId "CUFF.139126.3"; tss_id "TSS139789";
-38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "2"; oId "CUFF.139126.4"; tss_id "TSS139789";
-38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "2"; oId "CUFF.139126.5"; tss_id "TSS139789";
-38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "2"; oId "CUFF.139126.6"; tss_id "TSS139789";
-38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "2"; oId "CUFF.139126.7"; tss_id "TSS139789";
-38	Cufflinks	exon	17781481	17782059	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
-38	Cufflinks	exon	17781481	17782059	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "3"; oId "CUFF.139126.3"; tss_id "TSS139789";
-38	Cufflinks	exon	17781481	17782059	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "3"; oId "CUFF.139126.4"; tss_id "TSS139789";
-38	Cufflinks	exon	17781481	17782059	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "3"; oId "CUFF.139126.6"; tss_id "TSS139789";
-38	Cufflinks	exon	17781481	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
-38	Cufflinks	exon	17781481	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "3"; oId "CUFF.139126.5"; tss_id "TSS139789";
-38	Cufflinks	exon	17781481	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "3"; oId "CUFF.139126.7"; tss_id "TSS139789";
-38	Cufflinks	exon	17782418	17782808	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "4"; oId "CUFF.139126.4"; tss_id "TSS139789";
-38	Cufflinks	exon	17782418	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
-38	Cufflinks	exon	17782418	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "4"; oId "CUFF.139126.3"; tss_id "TSS139789";
-38	Cufflinks	exon	17782418	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "4"; oId "CUFF.139126.6"; tss_id "TSS139789";
-38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
-38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
-38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "5"; oId "CUFF.139126.3"; tss_id "TSS139789";
-38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "5"; oId "CUFF.139126.4"; tss_id "TSS139789";
-38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "4"; oId "CUFF.139126.5"; tss_id "TSS139789";
-38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "5"; oId "CUFF.139126.6"; tss_id "TSS139789";
-38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "4"; oId "CUFF.139126.7"; tss_id "TSS139789";
-38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
-38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
-38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "6"; oId "CUFF.139126.3"; tss_id "TSS139789";
-38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "6"; oId "CUFF.139126.4"; tss_id "TSS139789";
-38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "5"; oId "CUFF.139126.5"; tss_id "TSS139789";
-38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "6"; oId "CUFF.139126.6"; tss_id "TSS139789";
-38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "5"; oId "CUFF.139126.7"; tss_id "TSS139789";
-38	Cufflinks	exon	17796338	17796598	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "7"; oId "CUFF.139126.4"; tss_id "TSS139789";
-38	Cufflinks	exon	17797004	17797666	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232056"; class_code "u"; exon_number "8"; oId "CUFF.139126.4"; tss_id "TSS139789";
-38	Cufflinks	exon	17797004	17797666	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "6"; oId "CUFF.139126.5"; tss_id "TSS139789";
-38	Cufflinks	exon	17798695	17798844	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
-38	Cufflinks	exon	17798695	17798844	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
-38	Cufflinks	exon	17798695	17798844	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "7"; oId "CUFF.139126.3"; tss_id "TSS139789";
-38	Cufflinks	exon	17798695	17798844	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "7"; oId "CUFF.139126.6"; tss_id "TSS139789";
-38	Cufflinks	exon	17798695	17798844	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "6"; oId "CUFF.139126.7"; tss_id "TSS139789";
-38	Cufflinks	exon	17805058	17805243	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "8"; oId "CUFF.139126.3"; tss_id "TSS139789";
-38	Cufflinks	exon	17807870	17808287	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
-38	Cufflinks	exon	17807870	17808287	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232054"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.2"; tss_id "TSS139788";
-38	Cufflinks	exon	17807870	17808287	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "9"; oId "CUFF.139126.3"; tss_id "TSS139789";
-38	Cufflinks	exon	17807870	17808287	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "8"; oId "CUFF.139126.6"; tss_id "TSS139789";
-38	Cufflinks	exon	17807870	17808287	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232059"; class_code "u"; exon_number "7"; oId "CUFF.139126.7"; tss_id "TSS139789";
-38	Cufflinks	exon	17808836	17809013	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232060"; class_code "u"; exon_number "1"; oId "CUFF.139119.1"; tss_id "TSS139790";
-38	Cufflinks	exon	17815543	17816012	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232061"; class_code "u"; exon_number "1"; oId "CUFF.139119.2"; tss_id "TSS139791";
-38	Cufflinks	exon	17815543	17816012	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "1"; oId "CUFF.139119.3"; tss_id "TSS139791";
-38	Cufflinks	exon	17816319	17818896	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232063"; class_code "u"; exon_number "1"; oId "CUFF.139119.4"; tss_id "TSS139792";
-38	Cufflinks	exon	17818488	17818896	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232064"; class_code "u"; exon_number "1"; oId "CUFF.139119.5"; tss_id "TSS139793";
-38	Cufflinks	exon	17823682	17823764	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232060"; class_code "u"; exon_number "2"; oId "CUFF.139119.1"; tss_id "TSS139790";
-38	Cufflinks	exon	17823682	17823764	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232061"; class_code "u"; exon_number "2"; oId "CUFF.139119.2"; tss_id "TSS139791";
-38	Cufflinks	exon	17823682	17823764	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "2"; oId "CUFF.139119.3"; tss_id "TSS139791";
-38	Cufflinks	exon	17823682	17823764	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232063"; class_code "u"; exon_number "2"; oId "CUFF.139119.4"; tss_id "TSS139792";
-38	Cufflinks	exon	17823682	17823764	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232064"; class_code "u"; exon_number "2"; oId "CUFF.139119.5"; tss_id "TSS139793";
-38	Cufflinks	exon	17824159	17824254	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232060"; class_code "u"; exon_number "3"; oId "CUFF.139119.1"; tss_id "TSS139790";
-38	Cufflinks	exon	17824159	17824254	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232061"; class_code "u"; exon_number "3"; oId "CUFF.139119.2"; tss_id "TSS139791";
-38	Cufflinks	exon	17824159	17824254	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "3"; oId "CUFF.139119.3"; tss_id "TSS139791";
-38	Cufflinks	exon	17824159	17824254	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232063"; class_code "u"; exon_number "3"; oId "CUFF.139119.4"; tss_id "TSS139792";
-38	Cufflinks	exon	17824159	17824254	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232064"; class_code "u"; exon_number "3"; oId "CUFF.139119.5"; tss_id "TSS139793";
-38	Cufflinks	exon	17831186	17831875	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232060"; class_code "u"; exon_number "4"; oId "CUFF.139119.1"; tss_id "TSS139790";
-38	Cufflinks	exon	17831186	17831875	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232063"; class_code "u"; exon_number "4"; oId "CUFF.139119.4"; tss_id "TSS139792";
-38	Cufflinks	exon	17835710	17835864	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232061"; class_code "u"; exon_number "4"; oId "CUFF.139119.2"; tss_id "TSS139791";
-38	Cufflinks	exon	17835710	17835864	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "4"; oId "CUFF.139119.3"; tss_id "TSS139791";
-38	Cufflinks	exon	17835710	17835864	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232064"; class_code "u"; exon_number "4"; oId "CUFF.139119.5"; tss_id "TSS139793";
-38	Cufflinks	exon	17836304	17836795	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "5"; oId "CUFF.139119.3"; tss_id "TSS139791";
-38	Cufflinks	exon	17836304	17838299	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232061"; class_code "u"; exon_number "5"; oId "CUFF.139119.2"; tss_id "TSS139791";
-38	Cufflinks	exon	17836304	17838299	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232064"; class_code "u"; exon_number "5"; oId "CUFF.139119.5"; tss_id "TSS139793";
-38	Cufflinks	exon	17837528	17838299	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232062"; class_code "u"; exon_number "6"; oId "CUFF.139119.3"; tss_id "TSS139791";
-38	Cufflinks	exon	17918227	17918903	.	-	.	gene_id "XLOC_091009"; transcript_id "TCONS_00233127"; class_code "u"; exon_number "1"; oId "CUFF.139113.1"; tss_id "TSS140378";
-38	Cufflinks	exon	17918227	17918922	.	+	.	gene_id "XLOC_090746"; transcript_id "TCONS_00232077"; class_code "u"; exon_number "1"; oId "CUFF.139112.1"; tss_id "TSS139799";
-38	Cufflinks	exon	17919100	17919183	.	-	.	gene_id "XLOC_091009"; transcript_id "TCONS_00233127"; class_code "u"; exon_number "2"; oId "CUFF.139113.1"; tss_id "TSS140378";
-38	Cufflinks	exon	17919836	17920054	.	+	.	gene_id "XLOC_090746"; transcript_id "TCONS_00232077"; class_code "u"; exon_number "2"; oId "CUFF.139112.1"; tss_id "TSS139799";
-38	Cufflinks	exon	17954360	17955431	.	+	.	gene_id "XLOC_090747"; transcript_id "TCONS_00232078"; class_code "u"; exon_number "1"; oId "CUFF.139118.1"; tss_id "TSS139800";
-38	Cufflinks	exon	17956218	17956622	.	+	.	gene_id "XLOC_090747"; transcript_id "TCONS_00232078"; class_code "u"; exon_number "2"; oId "CUFF.139118.1"; tss_id "TSS139800";
-38	Cufflinks	exon	1795723	1795760	.	+	.	gene_id "XLOC_090627"; transcript_id "TCONS_00231552"; class_code "u"; exon_number "1"; oId "CUFF.137644.1"; tss_id "TSS139538";
-38	Cufflinks	exon	1796721	1797171	.	+	.	gene_id "XLOC_090627"; transcript_id "TCONS_00231552"; class_code "u"; exon_number "2"; oId "CUFF.137644.1"; tss_id "TSS139538";
-38	Cufflinks	exon	18588191	18595876	.	-	.	gene_id "XLOC_091011"; transcript_id "TCONS_00233145"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000013289"; nearest_ref "ENSCAFT00000021112"; oId "CUFF.139436.16"; tss_id "TSS140386";
-38	Cufflinks	exon	18698205	18699132	.	-	.	gene_id "XLOC_091011"; transcript_id "TCONS_00233145"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000013289"; nearest_ref "ENSCAFT00000021112"; oId "CUFF.139436.16"; tss_id "TSS140386";
-38	Cufflinks	exon	1898568	1898762	.	+	.	gene_id "XLOC_090628"; transcript_id "TCONS_00231553"; class_code "u"; exon_number "1"; oId "CUFF.137737.1"; tss_id "TSS139539";
-38	Cufflinks	exon	1898568	1898762	.	+	.	gene_id "XLOC_090628"; transcript_id "TCONS_00231554"; class_code "u"; exon_number "1"; oId "CUFF.137737.2"; tss_id "TSS139539";
-38	Cufflinks	exon	1901693	1906547	.	+	.	gene_id "XLOC_090628"; transcript_id "TCONS_00231554"; class_code "u"; exon_number "2"; oId "CUFF.137737.2"; tss_id "TSS139539";
-38	Cufflinks	exon	1903231	1906547	.	+	.	gene_id "XLOC_090628"; transcript_id "TCONS_00231553"; class_code "u"; exon_number "2"; oId "CUFF.137737.1"; tss_id "TSS139539";
-38	Cufflinks	exon	1912606	1912887	.	-	.	gene_id "XLOC_090891"; transcript_id "TCONS_00232655"; class_code "u"; exon_number "1"; oId "CUFF.137665.1"; tss_id "TSS140114";
-38	Cufflinks	exon	1914857	1918120	.	-	.	gene_id "XLOC_090891"; transcript_id "TCONS_00232655"; class_code "u"; exon_number "2"; oId "CUFF.137665.1"; tss_id "TSS140114";
-38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232657"; class_code "u"; exon_number "1"; oId "CUFF.137678.4"; tss_id "TSS140115";
-38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232658"; class_code "u"; exon_number "1"; oId "CUFF.137678.2"; tss_id "TSS140116";
-38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232659"; class_code "u"; exon_number "1"; oId "CUFF.137678.7"; tss_id "TSS140116";
-38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232660"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.5"; tss_id "TSS140117";
-38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232661"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.3"; tss_id "TSS140118";
-38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232662"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.1"; tss_id "TSS140119";
-38	Cufflinks	exon	1920299	1923037	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232659"; class_code "u"; exon_number "2"; oId "CUFF.137678.7"; tss_id "TSS140116";
-38	Cufflinks	exon	1920560	1921420	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232657"; class_code "u"; exon_number "2"; oId "CUFF.137678.4"; tss_id "TSS140115";
-38	Cufflinks	exon	1920560	1923003	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232658"; class_code "u"; exon_number "2"; oId "CUFF.137678.2"; tss_id "TSS140116";
-38	Cufflinks	exon	1922478	1922498	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232657"; class_code "u"; exon_number "3"; oId "CUFF.137678.4"; tss_id "TSS140115";
-38	Cufflinks	exon	1923288	1926646	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232660"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.5"; tss_id "TSS140117";
-38	Cufflinks	exon	1928136	1928213	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232661"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.3"; tss_id "TSS140118";
-38	Cufflinks	exon	1929437	1929574	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232662"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.1"; tss_id "TSS140119";
-38	Cufflinks	exon	19507549	19508594	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233148"; class_code "u"; exon_number "1"; oId "CUFF.139379.2"; tss_id "TSS140388";
-38	Cufflinks	exon	19507549	19508594	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233149"; class_code "u"; exon_number "1"; oId "CUFF.139379.1"; tss_id "TSS140389";
-38	Cufflinks	exon	19508997	19509216	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233149"; class_code "u"; exon_number "2"; oId "CUFF.139379.1"; tss_id "TSS140389";
-38	Cufflinks	exon	19509838	19509927	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233148"; class_code "u"; exon_number "2"; oId "CUFF.139379.2"; tss_id "TSS140388";
-38	Cufflinks	exon	19509838	19509927	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233149"; class_code "u"; exon_number "3"; oId "CUFF.139379.1"; tss_id "TSS140389";
-38	Cufflinks	exon	19518322	19518360	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233148"; class_code "u"; exon_number "3"; oId "CUFF.139379.2"; tss_id "TSS140388";
-38	Cufflinks	exon	19518322	19518924	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233149"; class_code "u"; exon_number "4"; oId "CUFF.139379.1"; tss_id "TSS140389";
-38	Cufflinks	exon	19604002	19604029	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232085"; class_code "u"; exon_number "1"; oId "CUFF.139381.1"; tss_id "TSS139807";
-38	Cufflinks	exon	19604003	19604550	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232086"; class_code "u"; exon_number "1"; oId "CUFF.139381.2"; tss_id "TSS139807";
-38	Cufflinks	exon	19604003	19604983	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232087"; class_code "u"; exon_number "1"; oId "CUFF.139381.3"; tss_id "TSS139807";
-38	Cufflinks	exon	19604004	19604029	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232088"; class_code "u"; exon_number "1"; oId "CUFF.139381.4"; tss_id "TSS139807";
-38	Cufflinks	exon	19604005	19604029	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232089"; class_code "u"; exon_number "1"; oId "CUFF.139381.5"; tss_id "TSS139807";
-38	Cufflinks	exon	19604096	19604336	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232088"; class_code "u"; exon_number "2"; oId "CUFF.139381.4"; tss_id "TSS139807";
-38	Cufflinks	exon	19604419	19604550	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232089"; class_code "u"; exon_number "2"; oId "CUFF.139381.5"; tss_id "TSS139807";
-38	Cufflinks	exon	19604843	19604983	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232085"; class_code "u"; exon_number "2"; oId "CUFF.139381.1"; tss_id "TSS139807";
-38	Cufflinks	exon	19604843	19604983	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232086"; class_code "u"; exon_number "2"; oId "CUFF.139381.2"; tss_id "TSS139807";
-38	Cufflinks	exon	19604843	19604983	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232088"; class_code "u"; exon_number "3"; oId "CUFF.139381.4"; tss_id "TSS139807";
-38	Cufflinks	exon	19604843	19604983	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232089"; class_code "u"; exon_number "3"; oId "CUFF.139381.5"; tss_id "TSS139807";
-38	Cufflinks	exon	19605120	19606194	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232087"; class_code "u"; exon_number "2"; oId "CUFF.139381.3"; tss_id "TSS139807";
-38	Cufflinks	exon	19605120	19609707	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232085"; class_code "u"; exon_number "3"; oId "CUFF.139381.1"; tss_id "TSS139807";
-38	Cufflinks	exon	19605120	19609707	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232086"; class_code "u"; exon_number "3"; oId "CUFF.139381.2"; tss_id "TSS139807";
-38	Cufflinks	exon	19605120	19609707	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232088"; class_code "u"; exon_number "4"; oId "CUFF.139381.4"; tss_id "TSS139807";
-38	Cufflinks	exon	19605120	19609707	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232089"; class_code "u"; exon_number "4"; oId "CUFF.139381.5"; tss_id "TSS139807";
-38	Cufflinks	exon	19606357	19609707	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232087"; class_code "u"; exon_number "3"; oId "CUFF.139381.3"; tss_id "TSS139807";
-38	Cufflinks	exon	2033827	2033967	.	-	.	gene_id "XLOC_090894"; transcript_id "TCONS_00232667"; class_code "u"; exon_number "1"; oId "CUFF.137720.1"; tss_id "TSS140122";
-38	Cufflinks	exon	2034886	2035040	.	-	.	gene_id "XLOC_090894"; transcript_id "TCONS_00232667"; class_code "u"; exon_number "2"; oId "CUFF.137720.1"; tss_id "TSS140122";
-38	Cufflinks	exon	2035130	2035282	.	-	.	gene_id "XLOC_090894"; transcript_id "TCONS_00232667"; class_code "u"; exon_number "3"; oId "CUFF.137720.1"; tss_id "TSS140122";
-38	Cufflinks	exon	20614031	20614239	.	+	.	gene_id "XLOC_090758"; transcript_id "TCONS_00232115"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013086"; nearest_ref "ENSCAFT00000020761"; oId "CUFF.139645.1"; tss_id "TSS139819";
-38	Cufflinks	exon	20614031	20614364	.	+	.	gene_id "XLOC_090758"; transcript_id "TCONS_00232114"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013086"; nearest_ref "ENSCAFT00000020761"; oId "CUFF.139645.2"; tss_id "TSS139819";
-38	Cufflinks	exon	20621470	20622028	.	+	.	gene_id "XLOC_090758"; transcript_id "TCONS_00232114"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013086"; nearest_ref "ENSCAFT00000020761"; oId "CUFF.139645.2"; tss_id "TSS139819";
-38	Cufflinks	exon	20627400	20627541	.	+	.	gene_id "XLOC_090758"; transcript_id "TCONS_00232115"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013086"; nearest_ref "ENSCAFT00000020761"; oId "CUFF.139645.1"; tss_id "TSS139819";
-38	Cufflinks	exon	20627657	20629009	.	+	.	gene_id "XLOC_090758"; transcript_id "TCONS_00232115"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000013086"; nearest_ref "ENSCAFT00000020761"; oId "CUFF.139645.1"; tss_id "TSS139819";
-38	Cufflinks	exon	20693076	20693130	.	-	.	gene_id "XLOC_091024"; transcript_id "TCONS_00233259"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013079"; nearest_ref "ENSCAFT00000020753"; oId "CUFF.139410.1"; tss_id "TSS140437";
-38	Cufflinks	exon	20693191	20694699	.	-	.	gene_id "XLOC_091024"; transcript_id "TCONS_00233259"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013079"; nearest_ref "ENSCAFT00000020753"; oId "CUFF.139410.1"; tss_id "TSS140437";
-38	Cufflinks	exon	20696662	20699085	.	-	.	gene_id "XLOC_091025"; transcript_id "TCONS_00233261"; class_code "u"; exon_number "1"; oId "CUFF.139514.1"; tss_id "TSS140439";
-38	Cufflinks	exon	20700833	20702200	.	-	.	gene_id "XLOC_091025"; transcript_id "TCONS_00233261"; class_code "u"; exon_number "2"; oId "CUFF.139514.1"; tss_id "TSS140439";
-38	Cufflinks	exon	2091977	2092500	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231588"; class_code "u"; exon_number "1"; oId "CUFF.137741.1"; tss_id "TSS139552";
-38	Cufflinks	exon	2092061	2092500	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231590"; class_code "u"; exon_number "1"; oId "CUFF.137741.3"; tss_id "TSS139552";
-38	Cufflinks	exon	2092068	2092820	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231591"; class_code "u"; exon_number "1"; oId "CUFF.137741.4"; tss_id "TSS139552";
-38	Cufflinks	exon	2092529	2092638	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231592"; class_code "u"; exon_number "1"; oId "CUFF.137741.5"; tss_id "TSS139553";
-38	Cufflinks	exon	20930283	20930820	.	-	.	gene_id "XLOC_091027"; transcript_id "TCONS_00233310"; class_code "u"; exon_number "1"; oId "CUFF.139404.1"; tss_id "TSS140456";
-38	Cufflinks	exon	20931334	20931511	.	-	.	gene_id "XLOC_091027"; transcript_id "TCONS_00233310"; class_code "u"; exon_number "2"; oId "CUFF.139404.1"; tss_id "TSS140456";
-38	Cufflinks	exon	20935500	20935529	.	-	.	gene_id "XLOC_091027"; transcript_id "TCONS_00233310"; class_code "u"; exon_number "3"; oId "CUFF.139404.1"; tss_id "TSS140456";
-38	Cufflinks	exon	2093797	2094320	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231588"; class_code "u"; exon_number "2"; oId "CUFF.137741.1"; tss_id "TSS139552";
-38	Cufflinks	exon	2093797	2094320	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231591"; class_code "u"; exon_number "2"; oId "CUFF.137741.4"; tss_id "TSS139552";
-38	Cufflinks	exon	2093797	2094320	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231592"; class_code "u"; exon_number "2"; oId "CUFF.137741.5"; tss_id "TSS139553";
-38	Cufflinks	exon	2097200	2097282	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231590"; class_code "u"; exon_number "2"; oId "CUFF.137741.3"; tss_id "TSS139552";
-38	Cufflinks	exon	20999665	20999943	.	-	.	gene_id "XLOC_091031"; transcript_id "TCONS_00233349"; class_code "u"; exon_number "1"; oId "CUFF.139538.1"; tss_id "TSS140465";
-38	Cufflinks	exon	21001214	21001493	.	-	.	gene_id "XLOC_091031"; transcript_id "TCONS_00233349"; class_code "u"; exon_number "2"; oId "CUFF.139538.1"; tss_id "TSS140465";
-38	Cufflinks	exon	2100157	2101989	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231590"; class_code "u"; exon_number "3"; oId "CUFF.137741.3"; tss_id "TSS139552";
-38	Cufflinks	exon	21020477	21021490	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233350"; class_code "u"; exon_number "1"; oId "CUFF.139547.3"; tss_id "TSS140466";
-38	Cufflinks	exon	21020477	21021490	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233351"; class_code "u"; exon_number "1"; oId "CUFF.139547.1"; tss_id "TSS140467";
-38	Cufflinks	exon	21020477	21021490	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233352"; class_code "u"; exon_number "1"; oId "CUFF.139547.2"; tss_id "TSS140468";
-38	Cufflinks	exon	2102073	2105133	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231590"; class_code "u"; exon_number "4"; oId "CUFF.137741.3"; tss_id "TSS139552";
-38	Cufflinks	exon	21022238	21022364	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233350"; class_code "u"; exon_number "2"; oId "CUFF.139547.3"; tss_id "TSS140466";
-38	Cufflinks	exon	21022238	21022364	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233351"; class_code "u"; exon_number "2"; oId "CUFF.139547.1"; tss_id "TSS140467";
-38	Cufflinks	exon	21022238	21022364	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233352"; class_code "u"; exon_number "2"; oId "CUFF.139547.2"; tss_id "TSS140468";
-38	Cufflinks	exon	21035866	21035913	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233350"; class_code "u"; exon_number "3"; oId "CUFF.139547.3"; tss_id "TSS140466";
-38	Cufflinks	exon	21039362	21039555	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233351"; class_code "u"; exon_number "3"; oId "CUFF.139547.1"; tss_id "TSS140467";
-38	Cufflinks	exon	21041320	21041562	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233352"; class_code "u"; exon_number "3"; oId "CUFF.139547.2"; tss_id "TSS140468";
-38	Cufflinks	exon	21110487	21110512	.	+	.	gene_id "XLOC_090763"; transcript_id "TCONS_00232139"; class_code "u"; exon_number "1"; oId "CUFF.139529.1"; tss_id "TSS139829";
-38	Cufflinks	exon	21111893	21113398	.	+	.	gene_id "XLOC_090763"; transcript_id "TCONS_00232140"; class_code "u"; exon_number "1"; oId "CUFF.139529.2"; tss_id "TSS139830";
-38	Cufflinks	exon	21112890	21114529	.	+	.	gene_id "XLOC_090763"; transcript_id "TCONS_00232139"; class_code "u"; exon_number "2"; oId "CUFF.139529.1"; tss_id "TSS139829";
-38	Cufflinks	exon	21120236	21120378	.	+	.	gene_id "XLOC_090763"; transcript_id "TCONS_00232140"; class_code "u"; exon_number "2"; oId "CUFF.139529.2"; tss_id "TSS139830";
-38	Cufflinks	exon	2129918	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231593"; class_code "u"; exon_number "1"; oId "CUFF.137733.1"; tss_id "TSS139554";
-38	Cufflinks	exon	2129918	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231594"; class_code "u"; exon_number "1"; oId "CUFF.137733.2"; tss_id "TSS139554";
-38	Cufflinks	exon	2129919	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231595"; class_code "u"; exon_number "1"; oId "CUFF.137733.3"; tss_id "TSS139554";
-38	Cufflinks	exon	2129919	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231596"; class_code "u"; exon_number "1"; oId "CUFF.137733.4"; tss_id "TSS139554";
-38	Cufflinks	exon	2129920	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231597"; class_code "u"; exon_number "1"; oId "CUFF.137733.5"; tss_id "TSS139554";
-38	Cufflinks	exon	2129920	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231598"; class_code "u"; exon_number "1"; oId "CUFF.137733.6"; tss_id "TSS139554";
-38	Cufflinks	exon	2129920	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231599"; class_code "u"; exon_number "1"; oId "CUFF.137733.7"; tss_id "TSS139554";
-38	Cufflinks	exon	2129924	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231600"; class_code "u"; exon_number "1"; oId "CUFF.137733.8"; tss_id "TSS139554";
-38	Cufflinks	exon	2130294	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231597"; class_code "u"; exon_number "2"; oId "CUFF.137733.5"; tss_id "TSS139554";
-38	Cufflinks	exon	2130294	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231599"; class_code "u"; exon_number "2"; oId "CUFF.137733.7"; tss_id "TSS139554";
-38	Cufflinks	exon	2130311	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231593"; class_code "u"; exon_number "2"; oId "CUFF.137733.1"; tss_id "TSS139554";
-38	Cufflinks	exon	2130311	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231594"; class_code "u"; exon_number "2"; oId "CUFF.137733.2"; tss_id "TSS139554";
-38	Cufflinks	exon	2130311	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231595"; class_code "u"; exon_number "2"; oId "CUFF.137733.3"; tss_id "TSS139554";
-38	Cufflinks	exon	2130311	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231598"; class_code "u"; exon_number "2"; oId "CUFF.137733.6"; tss_id "TSS139554";
-38	Cufflinks	exon	2130311	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231600"; class_code "u"; exon_number "2"; oId "CUFF.137733.8"; tss_id "TSS139554";
-38	Cufflinks	exon	2130667	2130710	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231601"; class_code "u"; exon_number "1"; oId "CUFF.137733.9"; tss_id "TSS139555";
-38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231593"; class_code "u"; exon_number "3"; oId "CUFF.137733.1"; tss_id "TSS139554";
-38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231594"; class_code "u"; exon_number "3"; oId "CUFF.137733.2"; tss_id "TSS139554";
-38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231595"; class_code "u"; exon_number "3"; oId "CUFF.137733.3"; tss_id "TSS139554";
-38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231597"; class_code "u"; exon_number "3"; oId "CUFF.137733.5"; tss_id "TSS139554";
-38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231598"; class_code "u"; exon_number "3"; oId "CUFF.137733.6"; tss_id "TSS139554";
-38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231599"; class_code "u"; exon_number "3"; oId "CUFF.137733.7"; tss_id "TSS139554";
-38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231600"; class_code "u"; exon_number "3"; oId "CUFF.137733.8"; tss_id "TSS139554";
-38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231601"; class_code "u"; exon_number "2"; oId "CUFF.137733.9"; tss_id "TSS139555";
-38	Cufflinks	exon	2132429	2132594	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231594"; class_code "u"; exon_number "4"; oId "CUFF.137733.2"; tss_id "TSS139554";
-38	Cufflinks	exon	2132429	2132594	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231595"; class_code "u"; exon_number "4"; oId "CUFF.137733.3"; tss_id "TSS139554";
-38	Cufflinks	exon	2132429	2133072	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231600"; class_code "u"; exon_number "4"; oId "CUFF.137733.8"; tss_id "TSS139554";
-38	Cufflinks	exon	2133317	2133508	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231595"; class_code "u"; exon_number "5"; oId "CUFF.137733.3"; tss_id "TSS139554";
-38	Cufflinks	exon	2133519	2134163	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231593"; class_code "u"; exon_number "4"; oId "CUFF.137733.1"; tss_id "TSS139554";
-38	Cufflinks	exon	2133519	2134163	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231594"; class_code "u"; exon_number "5"; oId "CUFF.137733.2"; tss_id "TSS139554";
-38	Cufflinks	exon	2133519	2134163	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231597"; class_code "u"; exon_number "4"; oId "CUFF.137733.5"; tss_id "TSS139554";
-38	Cufflinks	exon	2133519	2134163	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231601"; class_code "u"; exon_number "3"; oId "CUFF.137733.9"; tss_id "TSS139555";
-38	Cufflinks	exon	2136847	2136872	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231602"; class_code "u"; exon_number "1"; oId "CUFF.137733.10"; tss_id "TSS139556";
-38	Cufflinks	exon	21372659	21373763	.	+	.	gene_id "XLOC_090777"; transcript_id "TCONS_00232178"; class_code "u"; exon_number "1"; oId "CUFF.139582.1"; tss_id "TSS139862";
-38	Cufflinks	exon	21375077	21375125	.	+	.	gene_id "XLOC_090777"; transcript_id "TCONS_00232178"; class_code "u"; exon_number "2"; oId "CUFF.139582.1"; tss_id "TSS139862";
-38	Cufflinks	exon	2143678	2144988	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231596"; class_code "u"; exon_number "2"; oId "CUFF.137733.4"; tss_id "TSS139554";
-38	Cufflinks	exon	2143678	2144988	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231598"; class_code "u"; exon_number "4"; oId "CUFF.137733.6"; tss_id "TSS139554";
-38	Cufflinks	exon	2143678	2144988	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231599"; class_code "u"; exon_number "4"; oId "CUFF.137733.7"; tss_id "TSS139554";
-38	Cufflinks	exon	2143678	2144988	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231602"; class_code "u"; exon_number "2"; oId "CUFF.137733.10"; tss_id "TSS139556";
-38	Cufflinks	exon	21560608	21561334	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232221"; class_code "u"; exon_number "1"; oId "CUFF.139571.1"; tss_id "TSS139886";
-38	Cufflinks	exon	21561059	21561334	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232222"; class_code "u"; exon_number "1"; oId "CUFF.139571.2"; tss_id "TSS139887";
-38	Cufflinks	exon	21561256	21561334	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232223"; class_code "u"; exon_number "1"; oId "CUFF.139571.3"; tss_id "TSS139888";
-38	Cufflinks	exon	21562308	21562409	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232221"; class_code "u"; exon_number "2"; oId "CUFF.139571.1"; tss_id "TSS139886";
-38	Cufflinks	exon	21562308	21562409	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232223"; class_code "u"; exon_number "2"; oId "CUFF.139571.3"; tss_id "TSS139888";
-38	Cufflinks	exon	21562407	21563077	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232224"; class_code "u"; exon_number "1"; oId "CUFF.139571.4"; tss_id "TSS139889";
-38	Cufflinks	exon	21562778	21563077	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232223"; class_code "u"; exon_number "3"; oId "CUFF.139571.3"; tss_id "TSS139888";
-38	Cufflinks	exon	21562992	21563077	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232221"; class_code "u"; exon_number "3"; oId "CUFF.139571.1"; tss_id "TSS139886";
-38	Cufflinks	exon	21563543	21565291	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232221"; class_code "u"; exon_number "4"; oId "CUFF.139571.1"; tss_id "TSS139886";
-38	Cufflinks	exon	21563543	21565291	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232222"; class_code "u"; exon_number "2"; oId "CUFF.139571.2"; tss_id "TSS139887";
-38	Cufflinks	exon	21563543	21565291	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232223"; class_code "u"; exon_number "4"; oId "CUFF.139571.3"; tss_id "TSS139888";
-38	Cufflinks	exon	21563543	21565291	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232224"; class_code "u"; exon_number "2"; oId "CUFF.139571.4"; tss_id "TSS139889";
-38	Cufflinks	exon	21688797	21688863	.	+	.	gene_id "XLOC_090788"; transcript_id "TCONS_00232240"; class_code "u"; exon_number "1"; oId "CUFF.139573.1"; tss_id "TSS139894";
-38	Cufflinks	exon	21689270	21692383	.	+	.	gene_id "XLOC_090788"; transcript_id "TCONS_00232240"; class_code "u"; exon_number "2"; oId "CUFF.139573.1"; tss_id "TSS139894";
-38	Cufflinks	exon	21700271	21701731	.	-	.	gene_id "XLOC_091055"; transcript_id "TCONS_00233511"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000012569"; nearest_ref "ENSCAFT00000019970"; oId "CUFF.139588.1"; tss_id "TSS140523";
-38	Cufflinks	exon	21711494	21711553	.	-	.	gene_id "XLOC_091055"; transcript_id "TCONS_00233511"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000012569"; nearest_ref "ENSCAFT00000019970"; oId "CUFF.139588.1"; tss_id "TSS140523";
-38	Cufflinks	exon	21715277	21715367	.	-	.	gene_id "XLOC_091055"; transcript_id "TCONS_00233511"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000012569"; nearest_ref "ENSCAFT00000019970"; oId "CUFF.139588.1"; tss_id "TSS140523";
-38	Cufflinks	exon	21764927	21765608	.	-	.	gene_id "XLOC_091056"; transcript_id "TCONS_00233512"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000023704"; nearest_ref "ENSCAFT00000036617"; oId "CUFF.139615.1"; tss_id "TSS140524";
-38	Cufflinks	exon	21768072	21768188	.	-	.	gene_id "XLOC_091056"; transcript_id "TCONS_00233512"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000023704"; nearest_ref "ENSCAFT00000036617"; oId "CUFF.139615.1"; tss_id "TSS140524";
-38	Cufflinks	exon	21775472	21775799	.	+	.	gene_id "XLOC_090794"; transcript_id "TCONS_00232274"; class_code "u"; exon_number "1"; oId "CUFF.139651.1"; tss_id "TSS139907";
-38	Cufflinks	exon	21784064	21784281	.	+	.	gene_id "XLOC_090794"; transcript_id "TCONS_00232274"; class_code "u"; exon_number "2"; oId "CUFF.139651.1"; tss_id "TSS139907";
-38	Cufflinks	exon	21792906	21793910	.	-	.	gene_id "XLOC_091057"; transcript_id "TCONS_00233513"; class_code "u"; exon_number "1"; oId "CUFF.139653.1"; tss_id "TSS140525";
-38	Cufflinks	exon	21794568	21794629	.	-	.	gene_id "XLOC_091057"; transcript_id "TCONS_00233513"; class_code "u"; exon_number "2"; oId "CUFF.139653.1"; tss_id "TSS140525";
-38	Cufflinks	exon	21794765	21794865	.	+	.	gene_id "XLOC_090795"; transcript_id "TCONS_00232276"; class_code "u"; exon_number "1"; oId "CUFF.139654.2"; tss_id "TSS139908";
-38	Cufflinks	exon	21794765	21795444	.	+	.	gene_id "XLOC_090795"; transcript_id "TCONS_00232275"; class_code "u"; exon_number "1"; oId "CUFF.139654.1"; tss_id "TSS139908";
-38	Cufflinks	exon	21795848	21796314	.	+	.	gene_id "XLOC_090795"; transcript_id "TCONS_00232275"; class_code "u"; exon_number "2"; oId "CUFF.139654.1"; tss_id "TSS139908";
-38	Cufflinks	exon	21795848	21796314	.	+	.	gene_id "XLOC_090795"; transcript_id "TCONS_00232276"; class_code "u"; exon_number "2"; oId "CUFF.139654.2"; tss_id "TSS139908";
-38	Cufflinks	exon	21800610	21804268	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233515"; class_code "u"; exon_number "1"; oId "CUFF.139655.1"; tss_id "TSS140527";
-38	Cufflinks	exon	21800610	21804309	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233514"; class_code "u"; exon_number "1"; oId "CUFF.139655.3"; tss_id "TSS140526";
-38	Cufflinks	exon	21800610	21805531	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233516"; class_code "u"; exon_number "1"; oId "CUFF.139655.2"; tss_id "TSS140527";
-38	Cufflinks	exon	21805345	21805689	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233514"; class_code "u"; exon_number "2"; oId "CUFF.139655.3"; tss_id "TSS140526";
-38	Cufflinks	exon	21805430	21805531	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233515"; class_code "u"; exon_number "2"; oId "CUFF.139655.1"; tss_id "TSS140527";
-38	Cufflinks	exon	21806053	21806062	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233515"; class_code "u"; exon_number "3"; oId "CUFF.139655.1"; tss_id "TSS140527";
-38	Cufflinks	exon	21806053	21806086	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233516"; class_code "u"; exon_number "2"; oId "CUFF.139655.2"; tss_id "TSS140527";
-38	Cufflinks	exon	21859927	21862306	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233538"; class_code "u"; exon_number "1"; oId "CUFF.139665.1"; tss_id "TSS140542";
-38	Cufflinks	exon	21859927	21862318	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233536"; class_code "u"; exon_number "1"; oId "CUFF.139665.5"; tss_id "TSS140540";
-38	Cufflinks	exon	21859927	21862318	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233539"; class_code "u"; exon_number "1"; oId "CUFF.139665.2"; tss_id "TSS140542";
-38	Cufflinks	exon	21859927	21862318	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233540"; class_code "u"; exon_number "1"; oId "CUFF.139665.3"; tss_id "TSS140542";
-38	Cufflinks	exon	21859927	21862860	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233537"; class_code "u"; exon_number "1"; oId "CUFF.139665.4"; tss_id "TSS140541";
-38	Cufflinks	exon	21862693	21862860	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233538"; class_code "u"; exon_number "2"; oId "CUFF.139665.1"; tss_id "TSS140542";
-38	Cufflinks	exon	21862693	21862860	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233539"; class_code "u"; exon_number "2"; oId "CUFF.139665.2"; tss_id "TSS140542";
-38	Cufflinks	exon	21862693	21863343	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233536"; class_code "u"; exon_number "2"; oId "CUFF.139665.5"; tss_id "TSS140540";
-38	Cufflinks	exon	21862699	21862860	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233540"; class_code "u"; exon_number "2"; oId "CUFF.139665.3"; tss_id "TSS140542";
-38	Cufflinks	exon	21863481	21863554	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233537"; class_code "u"; exon_number "2"; oId "CUFF.139665.4"; tss_id "TSS140541";
-38	Cufflinks	exon	21863481	21865412	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233540"; class_code "u"; exon_number "3"; oId "CUFF.139665.3"; tss_id "TSS140542";
-38	Cufflinks	exon	21863481	21867420	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233538"; class_code "u"; exon_number "3"; oId "CUFF.139665.1"; tss_id "TSS140542";
-38	Cufflinks	exon	21863481	21867420	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233539"; class_code "u"; exon_number "3"; oId "CUFF.139665.2"; tss_id "TSS140542";
-38	Cufflinks	exon	21865525	21867420	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233540"; class_code "u"; exon_number "4"; oId "CUFF.139665.3"; tss_id "TSS140542";
-38	Cufflinks	exon	21872669	21874742	.	+	.	gene_id "XLOC_090796"; transcript_id "TCONS_00232278"; class_code "u"; exon_number "1"; oId "CUFF.139663.1"; tss_id "TSS139909";
-38	Cufflinks	exon	21873957	21874564	.	-	.	gene_id "XLOC_091062"; transcript_id "TCONS_00233543"; class_code "u"; exon_number "1"; oId "CUFF.139664.1"; tss_id "TSS140544";
-38	Cufflinks	exon	21875052	21876533	.	-	.	gene_id "XLOC_091062"; transcript_id "TCONS_00233543"; class_code "u"; exon_number "2"; oId "CUFF.139664.1"; tss_id "TSS140544";
-38	Cufflinks	exon	21875530	21875581	.	+	.	gene_id "XLOC_090796"; transcript_id "TCONS_00232279"; class_code "u"; exon_number "1"; oId "CUFF.139663.2"; tss_id "TSS139910";
-38	Cufflinks	exon	21875827	21876894	.	+	.	gene_id "XLOC_090796"; transcript_id "TCONS_00232278"; class_code "u"; exon_number "2"; oId "CUFF.139663.1"; tss_id "TSS139909";
-38	Cufflinks	exon	21875827	21876894	.	+	.	gene_id "XLOC_090796"; transcript_id "TCONS_00232279"; class_code "u"; exon_number "2"; oId "CUFF.139663.2"; tss_id "TSS139910";
-38	Cufflinks	exon	22062648	22062673	.	+	.	gene_id "XLOC_090801"; transcript_id "TCONS_00232316"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000012174"; nearest_ref "ENSCAFT00000019707"; oId "CUFF.140161.1"; tss_id "TSS139926";
-38	Cufflinks	exon	22062856	22062954	.	+	.	gene_id "XLOC_090801"; transcript_id "TCONS_00232316"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000012174"; nearest_ref "ENSCAFT00000019707"; oId "CUFF.140161.1"; tss_id "TSS139926";
-38	Cufflinks	exon	22062896	22062950	.	+	.	gene_id "XLOC_090801"; transcript_id "TCONS_00232317"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000012174"; nearest_ref "ENSCAFT00000019707"; oId "CUFF.140161.2"; tss_id "TSS139927";
-38	Cufflinks	exon	22064002	22070883	.	+	.	gene_id "XLOC_090801"; transcript_id "TCONS_00232316"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000012174"; nearest_ref "ENSCAFT00000019707"; oId "CUFF.140161.1"; tss_id "TSS139926";
-38	Cufflinks	exon	22064002	22070883	.	+	.	gene_id "XLOC_090801"; transcript_id "TCONS_00232317"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000012174"; nearest_ref "ENSCAFT00000019707"; oId "CUFF.140161.2"; tss_id "TSS139927";
-38	Cufflinks	exon	22081432	22081574	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232318"; class_code "u"; exon_number "1"; oId "CUFF.139671.1"; tss_id "TSS139928";
-38	Cufflinks	exon	22081497	22081574	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232319"; class_code "u"; exon_number "1"; oId "CUFF.139671.2"; tss_id "TSS139928";
-38	Cufflinks	exon	22081548	22081574	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232320"; class_code "u"; exon_number "1"; oId "CUFF.139671.3"; tss_id "TSS139929";
-38	Cufflinks	exon	22081548	22081574	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232321"; class_code "u"; exon_number "1"; oId "CUFF.139671.4"; tss_id "TSS139929";
-38	Cufflinks	exon	22084588	22084609	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232322"; class_code "u"; exon_number "1"; oId "CUFF.139671.5"; tss_id "TSS139930";
-38	Cufflinks	exon	22085213	22085360	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232322"; class_code "u"; exon_number "2"; oId "CUFF.139671.5"; tss_id "TSS139930";
-38	Cufflinks	exon	22088138	22090077	.	-	.	gene_id "XLOC_091067"; transcript_id "TCONS_00233568"; class_code "u"; exon_number "1"; oId "CUFF.139673.1"; tss_id "TSS140559";
-38	Cufflinks	exon	22088138	22090081	.	-	.	gene_id "XLOC_091067"; transcript_id "TCONS_00233569"; class_code "u"; exon_number "1"; oId "CUFF.139673.2"; tss_id "TSS140559";
-38	Cufflinks	exon	22089898	22092743	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232319"; class_code "u"; exon_number "2"; oId "CUFF.139671.2"; tss_id "TSS139928";
-38	Cufflinks	exon	22090149	22090198	.	-	.	gene_id "XLOC_091067"; transcript_id "TCONS_00233568"; class_code "u"; exon_number "2"; oId "CUFF.139673.1"; tss_id "TSS140559";
-38	Cufflinks	exon	22090149	22090218	.	-	.	gene_id "XLOC_091067"; transcript_id "TCONS_00233569"; class_code "u"; exon_number "2"; oId "CUFF.139673.2"; tss_id "TSS140559";
-38	Cufflinks	exon	22090158	22090248	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232318"; class_code "u"; exon_number "2"; oId "CUFF.139671.1"; tss_id "TSS139928";
-38	Cufflinks	exon	22090158	22092743	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232320"; class_code "u"; exon_number "2"; oId "CUFF.139671.3"; tss_id "TSS139929";
-38	Cufflinks	exon	22090158	22092743	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232322"; class_code "u"; exon_number "3"; oId "CUFF.139671.5"; tss_id "TSS139930";
-38	Cufflinks	exon	22091338	22092743	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232318"; class_code "u"; exon_number "3"; oId "CUFF.139671.1"; tss_id "TSS139928";
-38	Cufflinks	exon	22091338	22092743	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232321"; class_code "u"; exon_number "2"; oId "CUFF.139671.4"; tss_id "TSS139929";
-38	Cufflinks	exon	22105750	22105913	.	-	.	gene_id "XLOC_091068"; transcript_id "TCONS_00233573"; class_code "u"; exon_number "1"; oId "CUFF.139694.4"; tss_id "TSS140561";
-38	Cufflinks	exon	22106902	22107116	.	-	.	gene_id "XLOC_091068"; transcript_id "TCONS_00233573"; class_code "u"; exon_number "2"; oId "CUFF.139694.4"; tss_id "TSS140561";
-38	Cufflinks	exon	22147891	22150285	.	-	.	gene_id "XLOC_091071"; transcript_id "TCONS_00233577"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011865"; nearest_ref "ENSCAFT00000018843"; oId "CUFF.139678.1"; tss_id "TSS140564";
-38	Cufflinks	exon	22150726	22150759	.	-	.	gene_id "XLOC_091071"; transcript_id "TCONS_00233577"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011865"; nearest_ref "ENSCAFT00000018843"; oId "CUFF.139678.1"; tss_id "TSS140564";
-38	Cufflinks	exon	2216210	2217313	.	-	.	gene_id "XLOC_090905"; transcript_id "TCONS_00232716"; class_code "u"; exon_number "1"; oId "CUFF.137759.4"; tss_id "TSS140151";
-38	Cufflinks	exon	2217731	2217774	.	-	.	gene_id "XLOC_090905"; transcript_id "TCONS_00232716"; class_code "u"; exon_number "2"; oId "CUFF.137759.4"; tss_id "TSS140151";
-38	Cufflinks	exon	2218479	2218571	.	-	.	gene_id "XLOC_090905"; transcript_id "TCONS_00232716"; class_code "u"; exon_number "3"; oId "CUFF.137759.4"; tss_id "TSS140151";
+38	Cufflinks	exon	16339470	16339496	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231955"; class_code "u"; exon_number "1"; oId "CUFF.139051.2"; tss_id "TSS139741";
+38	Cufflinks	exon	16350683	16350811	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231955"; class_code "u"; exon_number "2"; oId "CUFF.139051.2"; tss_id "TSS139741";
+38	Cufflinks	exon	16371249	16373514	.	+	.	gene_id "XLOC_090726"; transcript_id "TCONS_00231955"; class_code "u"; exon_number "3"; oId "CUFF.139051.2"; tss_id "TSS139741";
+38	Cufflinks	exon	5743324	5743684	.	-	.	gene_id "XLOC_090925"; transcript_id "TCONS_00232810"; class_code "u"; exon_number "1"; oId "CUFF.138244.1"; tss_id "TSS140194";
+38	Cufflinks	exon	5761257	5761392	.	-	.	gene_id "XLOC_090925"; transcript_id "TCONS_00232810"; class_code "u"; exon_number "2"; oId "CUFF.138244.1"; tss_id "TSS140194";
+38	Cufflinks	exon	5777676	5777846	.	-	.	gene_id "XLOC_090925"; transcript_id "TCONS_00232810"; class_code "u"; exon_number "3"; oId "CUFF.138244.1"; tss_id "TSS140194";
+38	Cufflinks	exon	5778401	5778553	.	-	.	gene_id "XLOC_090925"; transcript_id "TCONS_00232810"; class_code "u"; exon_number "4"; oId "CUFF.138244.1"; tss_id "TSS140194";
+38	Cufflinks	exon	5806050	5806154	.	-	.	gene_id "XLOC_090925"; transcript_id "TCONS_00232810"; class_code "u"; exon_number "5"; oId "CUFF.138244.1"; tss_id "TSS140194";
 38	Cufflinks	exon	22197693	22199305	.	-	.	gene_id "XLOC_091073"; transcript_id "TCONS_00233579"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011857"; nearest_ref "ENSCAFT00000018829"; oId "CUFF.139685.1"; tss_id "TSS140566";
-38	Cufflinks	exon	22197693	22201770	.	-	.	gene_id "XLOC_091073"; transcript_id "TCONS_00233580"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011857"; nearest_ref "ENSCAFT00000018829"; oId "CUFF.139685.2"; tss_id "TSS140566";
 38	Cufflinks	exon	22200130	22201770	.	-	.	gene_id "XLOC_091073"; transcript_id "TCONS_00233579"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011857"; nearest_ref "ENSCAFT00000018829"; oId "CUFF.139685.1"; tss_id "TSS140566";
 38	Cufflinks	exon	22201944	22201997	.	-	.	gene_id "XLOC_091073"; transcript_id "TCONS_00233579"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000011857"; nearest_ref "ENSCAFT00000018829"; oId "CUFF.139685.1"; tss_id "TSS140566";
-38	Cufflinks	exon	22201944	22201997	.	-	.	gene_id "XLOC_091073"; transcript_id "TCONS_00233580"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011857"; nearest_ref "ENSCAFT00000018829"; oId "CUFF.139685.2"; tss_id "TSS140566";
-38	Cufflinks	exon	22297942	22298159	.	+	.	gene_id "XLOC_090817"; transcript_id "TCONS_00232385"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011795"; nearest_ref "ENSCAFT00000018715"; oId "CUFF.139717.1"; tss_id "TSS139969";
-38	Cufflinks	exon	22298354	22300579	.	+	.	gene_id "XLOC_090817"; transcript_id "TCONS_00232386"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011795"; nearest_ref "ENSCAFT00000018715"; oId "CUFF.139717.2"; tss_id "TSS139970";
-38	Cufflinks	exon	22298956	22300579	.	+	.	gene_id "XLOC_090817"; transcript_id "TCONS_00232385"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011795"; nearest_ref "ENSCAFT00000018715"; oId "CUFF.139717.1"; tss_id "TSS139969";
-38	Cufflinks	exon	22301794	22301867	.	+	.	gene_id "XLOC_090817"; transcript_id "TCONS_00232386"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011795"; nearest_ref "ENSCAFT00000018715"; oId "CUFF.139717.2"; tss_id "TSS139970";
-38	Cufflinks	exon	22301883	22301952	.	+	.	gene_id "XLOC_090817"; transcript_id "TCONS_00232385"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000011795"; nearest_ref "ENSCAFT00000018715"; oId "CUFF.139717.1"; tss_id "TSS139969";
-38	Cufflinks	exon	22337039	22340652	.	-	.	gene_id "XLOC_091082"; transcript_id "TCONS_00233594"; class_code "u"; exon_number "1"; oId "CUFF.139693.2"; tss_id "TSS140576";
-38	Cufflinks	exon	22341062	22341528	.	-	.	gene_id "XLOC_091082"; transcript_id "TCONS_00233594"; class_code "u"; exon_number "2"; oId "CUFF.139693.2"; tss_id "TSS140576";
-38	Cufflinks	exon	22342786	22342949	.	-	.	gene_id "XLOC_091082"; transcript_id "TCONS_00233594"; class_code "u"; exon_number "3"; oId "CUFF.139693.2"; tss_id "TSS140576";
-38	Cufflinks	exon	22347445	22347777	.	+	.	gene_id "XLOC_090818"; transcript_id "TCONS_00232387"; class_code "u"; exon_number "1"; oId "CUFF.139691.1"; tss_id "TSS139971";
-38	Cufflinks	exon	22348507	22349143	.	+	.	gene_id "XLOC_090818"; transcript_id "TCONS_00232387"; class_code "u"; exon_number "2"; oId "CUFF.139691.1"; tss_id "TSS139971";
-38	Cufflinks	exon	22349895	22351433	.	-	.	gene_id "XLOC_091083"; transcript_id "TCONS_00233600"; class_code "u"; exon_number "1"; oId "CUFF.139706.2"; tss_id "TSS140581";
-38	Cufflinks	exon	22349895	22351433	.	-	.	gene_id "XLOC_091083"; transcript_id "TCONS_00233601"; class_code "u"; exon_number "1"; oId "CUFF.139706.1"; tss_id "TSS140582";
-38	Cufflinks	exon	22353389	22353464	.	-	.	gene_id "XLOC_091083"; transcript_id "TCONS_00233600"; class_code "u"; exon_number "2"; oId "CUFF.139706.2"; tss_id "TSS140581";
-38	Cufflinks	exon	22353488	22353807	.	-	.	gene_id "XLOC_091083"; transcript_id "TCONS_00233601"; class_code "u"; exon_number "2"; oId "CUFF.139706.1"; tss_id "TSS140582";
-38	Cufflinks	exon	22367126	22367795	.	-	.	gene_id "XLOC_091084"; transcript_id "TCONS_00233602"; class_code "u"; exon_number "1"; oId "CUFF.139718.1"; tss_id "TSS140583";
-38	Cufflinks	exon	22368617	22368979	.	-	.	gene_id "XLOC_091084"; transcript_id "TCONS_00233602"; class_code "u"; exon_number "2"; oId "CUFF.139718.1"; tss_id "TSS140583";
-38	Cufflinks	exon	22463938	22463964	.	+	.	gene_id "XLOC_090820"; transcript_id "TCONS_00232389"; class_code "u"; exon_number "1"; oId "CUFF.139721.1"; tss_id "TSS139973";
-38	Cufflinks	exon	22467158	22468036	.	+	.	gene_id "XLOC_090820"; transcript_id "TCONS_00232389"; class_code "u"; exon_number "2"; oId "CUFF.139721.1"; tss_id "TSS139973";
-38	Cufflinks	exon	22542365	22542439	.	+	.	gene_id "XLOC_090822"; transcript_id "TCONS_00232391"; class_code "u"; exon_number "1"; oId "CUFF.139729.1"; tss_id "TSS139975";
-38	Cufflinks	exon	22542375	22542439	.	+	.	gene_id "XLOC_090822"; transcript_id "TCONS_00232392"; class_code "u"; exon_number "1"; oId "CUFF.139729.2"; tss_id "TSS139975";
-38	Cufflinks	exon	22553570	22553693	.	+	.	gene_id "XLOC_090822"; transcript_id "TCONS_00232392"; class_code "u"; exon_number "2"; oId "CUFF.139729.2"; tss_id "TSS139975";
-38	Cufflinks	exon	22554683	22555006	.	+	.	gene_id "XLOC_090822"; transcript_id "TCONS_00232391"; class_code "u"; exon_number "2"; oId "CUFF.139729.1"; tss_id "TSS139975";
-38	Cufflinks	exon	22554683	22555006	.	+	.	gene_id "XLOC_090822"; transcript_id "TCONS_00232392"; class_code "u"; exon_number "3"; oId "CUFF.139729.2"; tss_id "TSS139975";
-38	Cufflinks	exon	22780704	22781150	.	+	.	gene_id "XLOC_090825"; transcript_id "TCONS_00232395"; class_code "u"; exon_number "1"; oId "CUFF.139779.1"; tss_id "TSS139978";
-38	Cufflinks	exon	22792433	22793274	.	+	.	gene_id "XLOC_090825"; transcript_id "TCONS_00232395"; class_code "u"; exon_number "2"; oId "CUFF.139779.1"; tss_id "TSS139978";
-38	Cufflinks	exon	22820029	22822122	.	-	.	gene_id "XLOC_091093"; transcript_id "TCONS_00233634"; class_code "u"; exon_number "1"; oId "CUFF.139749.2"; tss_id "TSS140604";
-38	Cufflinks	exon	22820029	22822125	.	-	.	gene_id "XLOC_091093"; transcript_id "TCONS_00233633"; class_code "u"; exon_number "1"; oId "CUFF.139749.1"; tss_id "TSS140604";
-38	Cufflinks	exon	22822590	22823165	.	-	.	gene_id "XLOC_091093"; transcript_id "TCONS_00233633"; class_code "u"; exon_number "2"; oId "CUFF.139749.1"; tss_id "TSS140604";
-38	Cufflinks	exon	22822590	22823165	.	-	.	gene_id "XLOC_091093"; transcript_id "TCONS_00233634"; class_code "u"; exon_number "2"; oId "CUFF.139749.2"; tss_id "TSS140604";
-38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232398"; class_code "u"; exon_number "1"; oId "CUFF.139985.1"; tss_id "TSS139981";
-38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232399"; class_code "u"; exon_number "1"; oId "CUFF.139985.2"; tss_id "TSS139981";
-38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232400"; class_code "u"; exon_number "1"; oId "CUFF.139985.3"; tss_id "TSS139981";
-38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232401"; class_code "u"; exon_number "1"; oId "CUFF.139985.4"; tss_id "TSS139981";
-38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232402"; class_code "u"; exon_number "1"; oId "CUFF.139985.5"; tss_id "TSS139981";
-38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232403"; class_code "u"; exon_number "1"; oId "CUFF.139985.6"; tss_id "TSS139981";
-38	Cufflinks	exon	22859878	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232399"; class_code "u"; exon_number "2"; oId "CUFF.139985.2"; tss_id "TSS139981";
-38	Cufflinks	exon	22859878	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232401"; class_code "u"; exon_number "2"; oId "CUFF.139985.4"; tss_id "TSS139981";
-38	Cufflinks	exon	22859974	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232398"; class_code "u"; exon_number "2"; oId "CUFF.139985.1"; tss_id "TSS139981";
-38	Cufflinks	exon	22859974	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232400"; class_code "u"; exon_number "2"; oId "CUFF.139985.3"; tss_id "TSS139981";
-38	Cufflinks	exon	22859984	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232402"; class_code "u"; exon_number "2"; oId "CUFF.139985.5"; tss_id "TSS139981";
-38	Cufflinks	exon	22859984	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232403"; class_code "u"; exon_number "2"; oId "CUFF.139985.6"; tss_id "TSS139981";
-38	Cufflinks	exon	22862511	22864181	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232399"; class_code "u"; exon_number "3"; oId "CUFF.139985.2"; tss_id "TSS139981";
-38	Cufflinks	exon	22862511	22864181	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232400"; class_code "u"; exon_number "3"; oId "CUFF.139985.3"; tss_id "TSS139981";
-38	Cufflinks	exon	22862511	22864181	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232403"; class_code "u"; exon_number "3"; oId "CUFF.139985.6"; tss_id "TSS139981";
-38	Cufflinks	exon	22862511	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232398"; class_code "u"; exon_number "3"; oId "CUFF.139985.1"; tss_id "TSS139981";
-38	Cufflinks	exon	22862511	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232401"; class_code "u"; exon_number "3"; oId "CUFF.139985.4"; tss_id "TSS139981";
-38	Cufflinks	exon	22862511	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232402"; class_code "u"; exon_number "3"; oId "CUFF.139985.5"; tss_id "TSS139981";
-38	Cufflinks	exon	22865237	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232399"; class_code "u"; exon_number "4"; oId "CUFF.139985.2"; tss_id "TSS139981";
-38	Cufflinks	exon	22865237	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232400"; class_code "u"; exon_number "4"; oId "CUFF.139985.3"; tss_id "TSS139981";
-38	Cufflinks	exon	22865237	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232403"; class_code "u"; exon_number "4"; oId "CUFF.139985.6"; tss_id "TSS139981";
-38	Cufflinks	exon	22873643	22873746	.	+	.	gene_id "XLOC_090829"; transcript_id "TCONS_00232405"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000025115"; nearest_ref "ENSCAFT00000018582"; oId "CUFF.139989.1"; tss_id "TSS139983";
-38	Cufflinks	exon	22873643	22873746	.	+	.	gene_id "XLOC_090829"; transcript_id "TCONS_00232406"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000025115"; nearest_ref "ENSCAFT00000018582"; oId "CUFF.139989.2"; tss_id "TSS139983";
-38	Cufflinks	exon	22873862	22874891	.	+	.	gene_id "XLOC_090829"; transcript_id "TCONS_00232406"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000025115"; nearest_ref "ENSCAFT00000018582"; oId "CUFF.139989.2"; tss_id "TSS139983";
-38	Cufflinks	exon	22873862	22875194	.	+	.	gene_id "XLOC_090829"; transcript_id "TCONS_00232405"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000025115"; nearest_ref "ENSCAFT00000018582"; oId "CUFF.139989.1"; tss_id "TSS139983";
-38	Cufflinks	exon	22875129	22875194	.	+	.	gene_id "XLOC_090829"; transcript_id "TCONS_00232406"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000025115"; nearest_ref "ENSCAFT00000018582"; oId "CUFF.139989.2"; tss_id "TSS139983";
-38	Cufflinks	exon	22943810	22944782	.	+	.	gene_id "XLOC_090831"; transcript_id "TCONS_00232408"; class_code "u"; exon_number "1"; oId "CUFF.139740.1"; tss_id "TSS139985";
-38	Cufflinks	exon	22945570	22946112	.	+	.	gene_id "XLOC_090831"; transcript_id "TCONS_00232408"; class_code "u"; exon_number "2"; oId "CUFF.139740.1"; tss_id "TSS139985";
-38	Cufflinks	exon	2324264	2324538	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231607"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.1"; tss_id "TSS139561";
-38	Cufflinks	exon	2324264	2324538	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
-38	Cufflinks	exon	2324275	2324538	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231609"; class_code "u"; exon_number "1"; oId "CUFF.137979.3"; tss_id "TSS139561";
-38	Cufflinks	exon	2324780	2324906	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
-38	Cufflinks	exon	2324780	2324906	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231609"; class_code "u"; exon_number "2"; oId "CUFF.137979.3"; tss_id "TSS139561";
-38	Cufflinks	exon	2328992	2329094	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231607"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.1"; tss_id "TSS139561";
-38	Cufflinks	exon	2328992	2329094	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
-38	Cufflinks	exon	2328992	2329094	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231609"; class_code "u"; exon_number "3"; oId "CUFF.137979.3"; tss_id "TSS139561";
-38	Cufflinks	exon	2329878	2329929	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231610"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.4"; tss_id "TSS139562";
-38	Cufflinks	exon	2334571	2334824	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231607"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.1"; tss_id "TSS139561";
-38	Cufflinks	exon	2334571	2334824	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
-38	Cufflinks	exon	2334571	2334824	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231610"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.4"; tss_id "TSS139562";
-38	Cufflinks	exon	2334571	2335253	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231609"; class_code "u"; exon_number "4"; oId "CUFF.137979.3"; tss_id "TSS139561";
-38	Cufflinks	exon	2340139	2340270	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231607"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.1"; tss_id "TSS139561";
-38	Cufflinks	exon	2340139	2340270	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
-38	Cufflinks	exon	2340139	2340270	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231610"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.4"; tss_id "TSS139562";
-38	Cufflinks	exon	2340736	2342639	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231607"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.1"; tss_id "TSS139561";
-38	Cufflinks	exon	2340736	2342639	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231608"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.2"; tss_id "TSS139561";
-38	Cufflinks	exon	2340736	2342639	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231610"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.4"; tss_id "TSS139562";
-38	Cufflinks	exon	23498078	23498775	.	-	.	gene_id "XLOC_091111"; transcript_id "TCONS_00233707"; class_code "u"; exon_number "1"; oId "CUFF.139766.1"; tss_id "TSS140636";
-38	Cufflinks	exon	23498994	23499036	.	-	.	gene_id "XLOC_091111"; transcript_id "TCONS_00233707"; class_code "u"; exon_number "2"; oId "CUFF.139766.1"; tss_id "TSS140636";
-38	Cufflinks	exon	23500593	23502384	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232436"; class_code "u"; exon_number "1"; oId "CUFF.139777.4"; tss_id "TSS140006";
-38	Cufflinks	exon	23500593	23505172	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232434"; class_code "u"; exon_number "1"; oId "CUFF.139777.2"; tss_id "TSS140006";
-38	Cufflinks	exon	23500593	23505172	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232435"; class_code "u"; exon_number "1"; oId "CUFF.139777.3"; tss_id "TSS140006";
-38	Cufflinks	exon	23500593	23505172	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232437"; class_code "u"; exon_number "1"; oId "CUFF.139777.5"; tss_id "TSS140006";
-38	Cufflinks	exon	23500593	23506616	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232433"; class_code "u"; exon_number "1"; oId "CUFF.139777.1"; tss_id "TSS140006";
-38	Cufflinks	exon	23501697	23502384	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232438"; class_code "u"; exon_number "1"; oId "CUFF.139777.6"; tss_id "TSS140007";
-38	Cufflinks	exon	23501729	23502882	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232439"; class_code "u"; exon_number "1"; oId "CUFF.139777.7"; tss_id "TSS140007";
-38	Cufflinks	exon	23503116	23503657	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232439"; class_code "u"; exon_number "2"; oId "CUFF.139777.7"; tss_id "TSS140007";
-38	Cufflinks	exon	23503116	23504267	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232438"; class_code "u"; exon_number "2"; oId "CUFF.139777.6"; tss_id "TSS140007";
-38	Cufflinks	exon	23503116	23505172	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232436"; class_code "u"; exon_number "2"; oId "CUFF.139777.4"; tss_id "TSS140006";
-38	Cufflinks	exon	23505320	23506473	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232436"; class_code "u"; exon_number "3"; oId "CUFF.139777.4"; tss_id "TSS140006";
-38	Cufflinks	exon	23505320	23506572	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232438"; class_code "u"; exon_number "3"; oId "CUFF.139777.6"; tss_id "TSS140007";
-38	Cufflinks	exon	23505320	23506616	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232434"; class_code "u"; exon_number "2"; oId "CUFF.139777.2"; tss_id "TSS140006";
-38	Cufflinks	exon	23505320	23506616	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232437"; class_code "u"; exon_number "2"; oId "CUFF.139777.5"; tss_id "TSS140006";
-38	Cufflinks	exon	23505320	23506701	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232435"; class_code "u"; exon_number "2"; oId "CUFF.139777.3"; tss_id "TSS140006";
-38	Cufflinks	exon	23506715	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232438"; class_code "u"; exon_number "4"; oId "CUFF.139777.6"; tss_id "TSS140007";
-38	Cufflinks	exon	23506760	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232435"; class_code "u"; exon_number "3"; oId "CUFF.139777.3"; tss_id "TSS140006";
-38	Cufflinks	exon	23506760	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232436"; class_code "u"; exon_number "4"; oId "CUFF.139777.4"; tss_id "TSS140006";
-38	Cufflinks	exon	23506789	23506801	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232434"; class_code "u"; exon_number "3"; oId "CUFF.139777.2"; tss_id "TSS140006";
-38	Cufflinks	exon	23506789	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232437"; class_code "u"; exon_number "3"; oId "CUFF.139777.5"; tss_id "TSS140006";
-38	Cufflinks	exon	23507019	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232433"; class_code "u"; exon_number "2"; oId "CUFF.139777.1"; tss_id "TSS140006";
-38	Cufflinks	exon	23507032	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232434"; class_code "u"; exon_number "4"; oId "CUFF.139777.2"; tss_id "TSS140006";
-38	Cufflinks	exon	2363642	2364055	.	+	.	gene_id "XLOC_090640"; transcript_id "TCONS_00231611"; class_code "u"; exon_number "1"; oId "CUFF.137755.1"; tss_id "TSS139563";
-38	Cufflinks	exon	2366782	2367159	.	+	.	gene_id "XLOC_090640"; transcript_id "TCONS_00231611"; class_code "u"; exon_number "2"; oId "CUFF.137755.1"; tss_id "TSS139563";
 38	Cufflinks	exon	2369409	2369512	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231615"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.4"; tss_id "TSS139564";
-38	Cufflinks	exon	23707147	23708085	.	+	.	gene_id "XLOC_090854"; transcript_id "TCONS_00232456"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000031030"; nearest_ref "ENSCAFT00000045878"; oId "CUFF.140178.2"; tss_id "TSS140016";
-38	Cufflinks	exon	23708560	23709187	.	+	.	gene_id "XLOC_090854"; transcript_id "TCONS_00232456"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000031030"; nearest_ref "ENSCAFT00000045878"; oId "CUFF.140178.2"; tss_id "TSS140016";
 38	Cufflinks	exon	2384266	2384403	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231615"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.4"; tss_id "TSS139564";
 38	Cufflinks	exon	2385508	2385626	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231615"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.4"; tss_id "TSS139564";
 38	Cufflinks	exon	2402080	2402202	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231615"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.4"; tss_id "TSS139564";
@@ -819,296 +592,514 @@
 38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231615"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.4"; tss_id "TSS139564";
 38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231615"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.4"; tss_id "TSS139564";
 38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231615"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.4"; tss_id "TSS139564";
-38	Cufflinks	exon	2773996	2779988	.	-	.	gene_id "XLOC_090915"; transcript_id "TCONS_00232763"; class_code "u"; exon_number "1"; oId "CUFF.138073.2"; tss_id "TSS140177";
-38	Cufflinks	exon	2773996	2779988	.	-	.	gene_id "XLOC_090915"; transcript_id "TCONS_00232764"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000029799"; nearest_ref "ENSCAFT00000046901"; oId "CUFF.138073.1"; tss_id "TSS140178";
-38	Cufflinks	exon	2780537	2781282	.	-	.	gene_id "XLOC_090915"; transcript_id "TCONS_00232763"; class_code "u"; exon_number "2"; oId "CUFF.138073.2"; tss_id "TSS140177";
-38	Cufflinks	exon	2783645	2783763	.	-	.	gene_id "XLOC_090915"; transcript_id "TCONS_00232764"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000029799"; nearest_ref "ENSCAFT00000046901"; oId "CUFF.138073.1"; tss_id "TSS140178";
-38	Cufflinks	exon	3500084	3500390	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "1"; oId "CUFF.137777.1"; tss_id "TSS139607";
-38	Cufflinks	exon	3536925	3537070	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "2"; oId "CUFF.137777.1"; tss_id "TSS139607";
-38	Cufflinks	exon	3538813	3539705	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231712"; class_code "u"; exon_number "1"; oId "CUFF.137777.2"; tss_id "TSS139608";
-38	Cufflinks	exon	3539078	3539705	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "3"; oId "CUFF.137777.1"; tss_id "TSS139607";
-38	Cufflinks	exon	3540310	3540409	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "4"; oId "CUFF.137777.1"; tss_id "TSS139607";
-38	Cufflinks	exon	3540310	3540409	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231712"; class_code "u"; exon_number "2"; oId "CUFF.137777.2"; tss_id "TSS139608";
-38	Cufflinks	exon	3540663	3540724	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "5"; oId "CUFF.137777.1"; tss_id "TSS139607";
-38	Cufflinks	exon	3540663	3540903	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231712"; class_code "u"; exon_number "3"; oId "CUFF.137777.2"; tss_id "TSS139608";
-38	Cufflinks	exon	3543341	3543387	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "6"; oId "CUFF.137777.1"; tss_id "TSS139607";
-38	Cufflinks	exon	3544049	3544723	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "7"; oId "CUFF.137777.1"; tss_id "TSS139607";
-38	Cufflinks	exon	360123	362409	.	-	.	gene_id "XLOC_090861"; transcript_id "TCONS_00232465"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009564"; nearest_ref "ENSCAFT00000015202"; oId "CUFF.137951.1"; tss_id "TSS140023";
-38	Cufflinks	exon	362621	362739	.	-	.	gene_id "XLOC_090861"; transcript_id "TCONS_00232465"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009564"; nearest_ref "ENSCAFT00000015202"; oId "CUFF.137951.1"; tss_id "TSS140023";
-38	Cufflinks	exon	364585	364674	.	-	.	gene_id "XLOC_090861"; transcript_id "TCONS_00232465"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009564"; nearest_ref "ENSCAFT00000015202"; oId "CUFF.137951.1"; tss_id "TSS140023";
-38	Cufflinks	exon	3646503	3646667	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231713"; class_code "u"; exon_number "1"; oId "CUFF.137958.3"; tss_id "TSS139609";
+38	Cufflinks	exon	21020477	21021490	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233350"; class_code "u"; exon_number "1"; oId "CUFF.139547.3"; tss_id "TSS140466";
+38	Cufflinks	exon	21022238	21022364	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233350"; class_code "u"; exon_number "2"; oId "CUFF.139547.3"; tss_id "TSS140466";
+38	Cufflinks	exon	21035866	21035913	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233350"; class_code "u"; exon_number "3"; oId "CUFF.139547.3"; tss_id "TSS140466";
+38	Cufflinks	exon	23501697	23502384	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232438"; class_code "u"; exon_number "1"; oId "CUFF.139777.6"; tss_id "TSS140007";
+38	Cufflinks	exon	23503116	23504267	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232438"; class_code "u"; exon_number "2"; oId "CUFF.139777.6"; tss_id "TSS140007";
+38	Cufflinks	exon	23505320	23506572	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232438"; class_code "u"; exon_number "3"; oId "CUFF.139777.6"; tss_id "TSS140007";
+38	Cufflinks	exon	23506715	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232438"; class_code "u"; exon_number "4"; oId "CUFF.139777.6"; tss_id "TSS140007";
+38	Cufflinks	exon	22858505	22858853	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232399"; class_code "u"; exon_number "1"; oId "CUFF.139985.2"; tss_id "TSS139981";
+38	Cufflinks	exon	22859878	22860177	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232399"; class_code "u"; exon_number "2"; oId "CUFF.139985.2"; tss_id "TSS139981";
+38	Cufflinks	exon	22862511	22864181	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232399"; class_code "u"; exon_number "3"; oId "CUFF.139985.2"; tss_id "TSS139981";
+38	Cufflinks	exon	22865237	22866335	.	+	.	gene_id "XLOC_090827"; transcript_id "TCONS_00232399"; class_code "u"; exon_number "4"; oId "CUFF.139985.2"; tss_id "TSS139981";
+38	Cufflinks	exon	21875530	21875581	.	+	.	gene_id "XLOC_090796"; transcript_id "TCONS_00232279"; class_code "u"; exon_number "1"; oId "CUFF.139663.2"; tss_id "TSS139910";
+38	Cufflinks	exon	21875827	21876894	.	+	.	gene_id "XLOC_090796"; transcript_id "TCONS_00232279"; class_code "u"; exon_number "2"; oId "CUFF.139663.2"; tss_id "TSS139910";
+38	Cufflinks	exon	17050836	17050972	.	+	.	gene_id "XLOC_090737"; transcript_id "TCONS_00232010"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013502"; nearest_ref "ENSCAFT00000021419"; oId "CUFF.139069.1"; tss_id "TSS139765";
+38	Cufflinks	exon	17051166	17051625	.	+	.	gene_id "XLOC_090737"; transcript_id "TCONS_00232010"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013502"; nearest_ref "ENSCAFT00000021419"; oId "CUFF.139069.1"; tss_id "TSS139765";
+38	Cufflinks	exon	15677388	15677508	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231943"; class_code "u"; exon_number "1"; oId "CUFF.139024.2"; tss_id "TSS139731";
+38	Cufflinks	exon	15704556	15704705	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231943"; class_code "u"; exon_number "2"; oId "CUFF.139024.2"; tss_id "TSS139731";
+38	Cufflinks	exon	15798860	15799144	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231943"; class_code "u"; exon_number "3"; oId "CUFF.139024.2"; tss_id "TSS139731";
+38	Cufflinks	exon	22780704	22781150	.	+	.	gene_id "XLOC_090825"; transcript_id "TCONS_00232395"; class_code "u"; exon_number "1"; oId "CUFF.139779.1"; tss_id "TSS139978";
+38	Cufflinks	exon	22792433	22793274	.	+	.	gene_id "XLOC_090825"; transcript_id "TCONS_00232395"; class_code "u"; exon_number "2"; oId "CUFF.139779.1"; tss_id "TSS139978";
+38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "1"; oId "CUFF.138034.1"; tss_id "TSS139475";
+38	Cufflinks	exon	516357	516383	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "2"; oId "CUFF.138034.1"; tss_id "TSS139475";
+38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "3"; oId "CUFF.138034.1"; tss_id "TSS139475";
+38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "4"; oId "CUFF.138034.1"; tss_id "TSS139475";
+38	Cufflinks	exon	521313	523712	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "5"; oId "CUFF.138034.1"; tss_id "TSS139475";
+38	Cufflinks	exon	524283	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "6"; oId "CUFF.138034.1"; tss_id "TSS139475";
+38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231406"; class_code "u"; exon_number "1"; oId "CUFF.138034.2"; tss_id "TSS139475";
+38	Cufflinks	exon	516357	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231406"; class_code "u"; exon_number "2"; oId "CUFF.138034.2"; tss_id "TSS139475";
+38	Cufflinks	exon	13646626	13648701	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232952"; class_code "u"; exon_number "1"; oId "CUFF.138873.2"; tss_id "TSS140277";
+38	Cufflinks	exon	13649335	13649446	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232952"; class_code "u"; exon_number "2"; oId "CUFF.138873.2"; tss_id "TSS140277";
+38	Cufflinks	exon	13651540	13651679	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232952"; class_code "u"; exon_number "3"; oId "CUFF.138873.2"; tss_id "TSS140277";
+38	Cufflinks	exon	13656338	13656515	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232952"; class_code "u"; exon_number "4"; oId "CUFF.138873.2"; tss_id "TSS140277";
+38	Cufflinks	exon	21794765	21795444	.	+	.	gene_id "XLOC_090795"; transcript_id "TCONS_00232275"; class_code "u"; exon_number "1"; oId "CUFF.139654.1"; tss_id "TSS139908";
+38	Cufflinks	exon	21795848	21796314	.	+	.	gene_id "XLOC_090795"; transcript_id "TCONS_00232275"; class_code "u"; exon_number "2"; oId "CUFF.139654.1"; tss_id "TSS139908";
+38	Cufflinks	exon	13911338	13911607	.	-	.	gene_id "XLOC_090967"; transcript_id "TCONS_00232958"; class_code "u"; exon_number "1"; oId "CUFF.138978.1"; tss_id "TSS140283";
+38	Cufflinks	exon	13912756	13912992	.	-	.	gene_id "XLOC_090967"; transcript_id "TCONS_00232958"; class_code "u"; exon_number "2"; oId "CUFF.138978.1"; tss_id "TSS140283";
+38	Cufflinks	exon	13946036	13946104	.	-	.	gene_id "XLOC_090967"; transcript_id "TCONS_00232958"; class_code "u"; exon_number "3"; oId "CUFF.138978.1"; tss_id "TSS140283";
+38	Cufflinks	exon	16858594	16858767	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231965"; class_code "u"; exon_number "1"; oId "CUFF.139121.2"; tss_id "TSS139749";
+38	Cufflinks	exon	16866188	16866275	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231965"; class_code "u"; exon_number "2"; oId "CUFF.139121.2"; tss_id "TSS139749";
+38	Cufflinks	exon	16867262	16870239	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231965"; class_code "u"; exon_number "3"; oId "CUFF.139121.2"; tss_id "TSS139749";
+38	Cufflinks	exon	17815543	17816012	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232061"; class_code "u"; exon_number "1"; oId "CUFF.139119.2"; tss_id "TSS139791";
+38	Cufflinks	exon	17823682	17823764	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232061"; class_code "u"; exon_number "2"; oId "CUFF.139119.2"; tss_id "TSS139791";
+38	Cufflinks	exon	17824159	17824254	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232061"; class_code "u"; exon_number "3"; oId "CUFF.139119.2"; tss_id "TSS139791";
+38	Cufflinks	exon	17835710	17835864	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232061"; class_code "u"; exon_number "4"; oId "CUFF.139119.2"; tss_id "TSS139791";
+38	Cufflinks	exon	17836304	17838299	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232061"; class_code "u"; exon_number "5"; oId "CUFF.139119.2"; tss_id "TSS139791";
+38	Cufflinks	exon	16475585	16475994	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233055"; class_code "u"; exon_number "1"; oId "CUFF.139062.1"; tss_id "TSS140340";
+38	Cufflinks	exon	16491482	16491615	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233055"; class_code "u"; exon_number "2"; oId "CUFF.139062.1"; tss_id "TSS140340";
+38	Cufflinks	exon	11673655	11673730	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231790"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.3"; tss_id "TSS139655";
+38	Cufflinks	exon	11678691	11679001	.	+	.	gene_id "XLOC_090675"; transcript_id "TCONS_00231790"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010731"; nearest_ref "ENSCAFT00000017072"; oId "CUFF.139287.3"; tss_id "TSS139655";
+38	Cufflinks	exon	516006	516041	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231415"; class_code "u"; exon_number "1"; oId "CUFF.138034.15"; tss_id "TSS139476";
+38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231415"; class_code "u"; exon_number "2"; oId "CUFF.138034.15"; tss_id "TSS139476";
+38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231415"; class_code "u"; exon_number "3"; oId "CUFF.138034.15"; tss_id "TSS139476";
+38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231415"; class_code "u"; exon_number "4"; oId "CUFF.138034.15"; tss_id "TSS139476";
+38	Cufflinks	exon	16006662	16006809	.	+	.	gene_id "XLOC_090723"; transcript_id "TCONS_00231950"; class_code "u"; exon_number "1"; oId "CUFF.138964.1"; tss_id "TSS139737";
+38	Cufflinks	exon	16056040	16056570	.	+	.	gene_id "XLOC_090723"; transcript_id "TCONS_00231950"; class_code "u"; exon_number "2"; oId "CUFF.138964.1"; tss_id "TSS139737";
+38	Cufflinks	exon	9506786	9507412	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232885"; class_code "u"; exon_number "1"; oId "CUFF.138979.1"; tss_id "TSS140236";
+38	Cufflinks	exon	9549709	9549764	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232885"; class_code "u"; exon_number "2"; oId "CUFF.138979.1"; tss_id "TSS140236";
+38	Cufflinks	exon	9604520	9604668	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232885"; class_code "u"; exon_number "3"; oId "CUFF.138979.1"; tss_id "TSS140236";
+38	Cufflinks	exon	9642250	9642323	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232885"; class_code "u"; exon_number "4"; oId "CUFF.138979.1"; tss_id "TSS140236";
+38	Cufflinks	exon	1898568	1898762	.	+	.	gene_id "XLOC_090628"; transcript_id "TCONS_00231553"; class_code "u"; exon_number "1"; oId "CUFF.137737.1"; tss_id "TSS139539";
+38	Cufflinks	exon	1903231	1906547	.	+	.	gene_id "XLOC_090628"; transcript_id "TCONS_00231553"; class_code "u"; exon_number "2"; oId "CUFF.137737.1"; tss_id "TSS139539";
 38	Cufflinks	exon	3646503	3646667	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231714"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.1"; tss_id "TSS139609";
-38	Cufflinks	exon	3646503	3646667	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
-38	Cufflinks	exon	3651620	3651701	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231713"; class_code "u"; exon_number "2"; oId "CUFF.137958.3"; tss_id "TSS139609";
-38	Cufflinks	exon	3651620	3651701	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
-38	Cufflinks	exon	3652175	3652283	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231713"; class_code "u"; exon_number "3"; oId "CUFF.137958.3"; tss_id "TSS139609";
-38	Cufflinks	exon	366582	367324	.	-	.	gene_id "XLOC_090861"; transcript_id "TCONS_00232465"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009564"; nearest_ref "ENSCAFT00000015202"; oId "CUFF.137951.1"; tss_id "TSS140023";
-38	Cufflinks	exon	3673515	3673570	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
-38	Cufflinks	exon	3690709	3690831	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
 38	Cufflinks	exon	3708054	3708140	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231714"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.1"; tss_id "TSS139609";
-38	Cufflinks	exon	3708054	3708140	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
 38	Cufflinks	exon	3712003	3712298	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231714"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.1"; tss_id "TSS139609";
-38	Cufflinks	exon	3712003	3712298	.	+	.	gene_id "XLOC_090652"; transcript_id "TCONS_00231715"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000021533"; nearest_ref "ENSCAFT00000033640"; oId "CUFF.137958.2"; tss_id "TSS139609";
-38	Cufflinks	exon	431382	432716	.	-	.	gene_id "XLOC_090862"; transcript_id "TCONS_00232466"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000031149"; nearest_ref "ENSCAFT00000047341"; oId "CUFF.137612.1"; tss_id "TSS140024";
-38	Cufflinks	exon	440491	440651	.	-	.	gene_id "XLOC_090862"; transcript_id "TCONS_00232466"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000031149"; nearest_ref "ENSCAFT00000047341"; oId "CUFF.137612.1"; tss_id "TSS140024";
-38	Cufflinks	exon	4471226	4471326	.	+	.	gene_id "XLOC_090654"; transcript_id "TCONS_00231717"; class_code "u"; exon_number "1"; oId "CUFF.137882.1"; tss_id "TSS139611";
-38	Cufflinks	exon	4471424	4471526	.	+	.	gene_id "XLOC_090654"; transcript_id "TCONS_00231717"; class_code "u"; exon_number "2"; oId "CUFF.137882.1"; tss_id "TSS139611";
-38	Cufflinks	exon	4472769	4473606	.	+	.	gene_id "XLOC_090654"; transcript_id "TCONS_00231717"; class_code "u"; exon_number "3"; oId "CUFF.137882.1"; tss_id "TSS139611";
-38	Cufflinks	exon	4590988	4591031	.	+	.	gene_id "XLOC_090655"; transcript_id "TCONS_00231718"; class_code "u"; exon_number "1"; oId "CUFF.137911.1"; tss_id "TSS139612";
-38	Cufflinks	exon	4600006	4600514	.	+	.	gene_id "XLOC_090655"; transcript_id "TCONS_00231718"; class_code "u"; exon_number "2"; oId "CUFF.137911.1"; tss_id "TSS139612";
-38	Cufflinks	exon	515156	515948	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231403"; class_code "u"; exon_number "1"; oId "CUFF.138034.11"; tss_id "TSS139475";
-38	Cufflinks	exon	515156	515948	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231404"; class_code "u"; exon_number "1"; oId "CUFF.138034.13"; tss_id "TSS139475";
-38	Cufflinks	exon	515156	515948	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231405"; class_code "u"; exon_number "1"; oId "CUFF.138034.14"; tss_id "TSS139475";
-38	Cufflinks	exon	515156	515948	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "1"; oId "CUFF.138034.6"; tss_id "TSS139475";
-38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "1"; oId "CUFF.138034.1"; tss_id "TSS139475";
-38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231402"; class_code "u"; exon_number "1"; oId "CUFF.138034.10"; tss_id "TSS139475";
-38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231406"; class_code "u"; exon_number "1"; oId "CUFF.138034.2"; tss_id "TSS139475";
-38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231407"; class_code "u"; exon_number "1"; oId "CUFF.138034.3"; tss_id "TSS139475";
-38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231408"; class_code "u"; exon_number "1"; oId "CUFF.138034.4"; tss_id "TSS139475";
-38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231409"; class_code "u"; exon_number "1"; oId "CUFF.138034.5"; tss_id "TSS139475";
-38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231411"; class_code "u"; exon_number "1"; oId "CUFF.138034.7"; tss_id "TSS139475";
-38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231412"; class_code "u"; exon_number "1"; oId "CUFF.138034.8"; tss_id "TSS139475";
+38	Cufflinks	exon	13531714	13531757	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231829"; class_code "u"; exon_number "1"; oId "CUFF.138852.2"; tss_id "TSS139675";
+38	Cufflinks	exon	13532639	13532750	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231829"; class_code "u"; exon_number "2"; oId "CUFF.138852.2"; tss_id "TSS139675";
+38	Cufflinks	exon	13534001	13534880	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231829"; class_code "u"; exon_number "3"; oId "CUFF.138852.2"; tss_id "TSS139675";
+38	Cufflinks	exon	2092061	2092500	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231590"; class_code "u"; exon_number "1"; oId "CUFF.137741.3"; tss_id "TSS139552";
+38	Cufflinks	exon	2097200	2097282	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231590"; class_code "u"; exon_number "2"; oId "CUFF.137741.3"; tss_id "TSS139552";
+38	Cufflinks	exon	2100157	2101989	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231590"; class_code "u"; exon_number "3"; oId "CUFF.137741.3"; tss_id "TSS139552";
+38	Cufflinks	exon	2102073	2105133	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231590"; class_code "u"; exon_number "4"; oId "CUFF.137741.3"; tss_id "TSS139552";
 38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231413"; class_code "u"; exon_number "1"; oId "CUFF.138034.9"; tss_id "TSS139475";
-38	Cufflinks	exon	516006	516041	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231415"; class_code "u"; exon_number "1"; oId "CUFF.138034.15"; tss_id "TSS139476";
-38	Cufflinks	exon	516103	516383	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231419"; class_code "u"; exon_number "1"; oId "CUFF.138034.19"; tss_id "TSS139476";
-38	Cufflinks	exon	516103	516387	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231417"; class_code "u"; exon_number "1"; oId "CUFF.138034.17"; tss_id "TSS139476";
-38	Cufflinks	exon	516103	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231416"; class_code "u"; exon_number "1"; oId "CUFF.138034.16"; tss_id "TSS139476";
-38	Cufflinks	exon	516357	516383	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "2"; oId "CUFF.138034.1"; tss_id "TSS139475";
-38	Cufflinks	exon	516357	516383	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231402"; class_code "u"; exon_number "2"; oId "CUFF.138034.10"; tss_id "TSS139475";
-38	Cufflinks	exon	516357	516383	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231409"; class_code "u"; exon_number "2"; oId "CUFF.138034.5"; tss_id "TSS139475";
-38	Cufflinks	exon	516357	516383	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231412"; class_code "u"; exon_number "2"; oId "CUFF.138034.8"; tss_id "TSS139475";
-38	Cufflinks	exon	516357	516387	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231407"; class_code "u"; exon_number "2"; oId "CUFF.138034.3"; tss_id "TSS139475";
-38	Cufflinks	exon	516357	516387	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231411"; class_code "u"; exon_number "2"; oId "CUFF.138034.7"; tss_id "TSS139475";
 38	Cufflinks	exon	516357	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231413"; class_code "u"; exon_number "2"; oId "CUFF.138034.9"; tss_id "TSS139475";
-38	Cufflinks	exon	516357	524422	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231408"; class_code "u"; exon_number "2"; oId "CUFF.138034.4"; tss_id "TSS139475";
-38	Cufflinks	exon	516357	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231406"; class_code "u"; exon_number "2"; oId "CUFF.138034.2"; tss_id "TSS139475";
-38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "3"; oId "CUFF.138034.1"; tss_id "TSS139475";
-38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231403"; class_code "u"; exon_number "2"; oId "CUFF.138034.11"; tss_id "TSS139475";
-38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231404"; class_code "u"; exon_number "2"; oId "CUFF.138034.13"; tss_id "TSS139475";
-38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231405"; class_code "u"; exon_number "2"; oId "CUFF.138034.14"; tss_id "TSS139475";
+38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231413"; class_code "u"; exon_number "3"; oId "CUFF.138034.9"; tss_id "TSS139475";
+38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231413"; class_code "u"; exon_number "4"; oId "CUFF.138034.9"; tss_id "TSS139475";
+38	Cufflinks	exon	1185983	1186691	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "1"; oId "CUFF.137647.11"; tss_id "TSS140087";
+38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "2"; oId "CUFF.137647.11"; tss_id "TSS140087";
+38	Cufflinks	exon	1187119	1187262	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "3"; oId "CUFF.137647.11"; tss_id "TSS140087";
+38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "4"; oId "CUFF.137647.11"; tss_id "TSS140087";
+38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "5"; oId "CUFF.137647.11"; tss_id "TSS140087";
+38	Cufflinks	exon	1217209	1217456	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232604"; class_code "u"; exon_number "6"; oId "CUFF.137647.11"; tss_id "TSS140087";
+38	Cufflinks	exon	741252	741350	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
+38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
+38	Cufflinks	exon	744306	745569	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
+38	Cufflinks	exon	746561	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
+38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
+38	Cufflinks	exon	750936	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
+38	Cufflinks	exon	1552646	1552684	.	+	.	gene_id "XLOC_090618"; transcript_id "TCONS_00231522"; class_code "u"; exon_number "1"; oId "CUFF.137640.1"; tss_id "TSS139518";
+38	Cufflinks	exon	1556694	1558232	.	+	.	gene_id "XLOC_090618"; transcript_id "TCONS_00231522"; class_code "u"; exon_number "2"; oId "CUFF.137640.1"; tss_id "TSS139518";
+38	Cufflinks	exon	17776393	17776462	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "1"; oId "CUFF.139126.5"; tss_id "TSS139789";
+38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "2"; oId "CUFF.139126.5"; tss_id "TSS139789";
+38	Cufflinks	exon	17781481	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "3"; oId "CUFF.139126.5"; tss_id "TSS139789";
+38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "4"; oId "CUFF.139126.5"; tss_id "TSS139789";
+38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "5"; oId "CUFF.139126.5"; tss_id "TSS139789";
+38	Cufflinks	exon	17797004	17797666	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232057"; class_code "u"; exon_number "6"; oId "CUFF.139126.5"; tss_id "TSS139789";
+38	Cufflinks	exon	1898568	1898762	.	+	.	gene_id "XLOC_090628"; transcript_id "TCONS_00231554"; class_code "u"; exon_number "1"; oId "CUFF.137737.2"; tss_id "TSS139539";
+38	Cufflinks	exon	1901693	1906547	.	+	.	gene_id "XLOC_090628"; transcript_id "TCONS_00231554"; class_code "u"; exon_number "2"; oId "CUFF.137737.2"; tss_id "TSS139539";
+38	Cufflinks	exon	22088138	22090077	.	-	.	gene_id "XLOC_091067"; transcript_id "TCONS_00233568"; class_code "u"; exon_number "1"; oId "CUFF.139673.1"; tss_id "TSS140559";
+38	Cufflinks	exon	22090149	22090198	.	-	.	gene_id "XLOC_091067"; transcript_id "TCONS_00233568"; class_code "u"; exon_number "2"; oId "CUFF.139673.1"; tss_id "TSS140559";
+38	Cufflinks	exon	16858594	16858767	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231966"; class_code "u"; exon_number "1"; oId "CUFF.139121.3"; tss_id "TSS139749";
+38	Cufflinks	exon	16866188	16870239	.	+	.	gene_id "XLOC_090732"; transcript_id "TCONS_00231966"; class_code "u"; exon_number "2"; oId "CUFF.139121.3"; tss_id "TSS139749";
+38	Cufflinks	exon	14342010	14349179	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232966"; class_code "u"; exon_number "1"; oId "CUFF.138879.1"; tss_id "TSS140289";
+38	Cufflinks	exon	14357755	14357891	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232966"; class_code "u"; exon_number "2"; oId "CUFF.138879.1"; tss_id "TSS140289";
+38	Cufflinks	exon	14367017	14367060	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232966"; class_code "u"; exon_number "3"; oId "CUFF.138879.1"; tss_id "TSS140289";
+38	Cufflinks	exon	14373097	14373259	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232966"; class_code "u"; exon_number "4"; oId "CUFF.138879.1"; tss_id "TSS140289";
+38	Cufflinks	exon	14376087	14376314	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232966"; class_code "u"; exon_number "5"; oId "CUFF.138879.1"; tss_id "TSS140289";
+38	Cufflinks	exon	1646610	1646872	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231531"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.1"; tss_id "TSS139523";
+38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231531"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.1"; tss_id "TSS139523";
+38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231531"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.1"; tss_id "TSS139523";
+38	Cufflinks	exon	1684969	1685040	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231531"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.1"; tss_id "TSS139523";
+38	Cufflinks	exon	137279	137596	.	-	.	gene_id "XLOC_090860"; transcript_id "TCONS_00232464"; class_code "u"; exon_number "1"; oId "CUFF.137600.1"; tss_id "TSS140022";
+38	Cufflinks	exon	169006	169131	.	-	.	gene_id "XLOC_090860"; transcript_id "TCONS_00232464"; class_code "u"; exon_number "2"; oId "CUFF.137600.1"; tss_id "TSS140022";
+38	Cufflinks	exon	169388	169496	.	-	.	gene_id "XLOC_090860"; transcript_id "TCONS_00232464"; class_code "u"; exon_number "3"; oId "CUFF.137600.1"; tss_id "TSS140022";
+38	Cufflinks	exon	2033827	2033967	.	-	.	gene_id "XLOC_090894"; transcript_id "TCONS_00232667"; class_code "u"; exon_number "1"; oId "CUFF.137720.1"; tss_id "TSS140122";
+38	Cufflinks	exon	2034886	2035040	.	-	.	gene_id "XLOC_090894"; transcript_id "TCONS_00232667"; class_code "u"; exon_number "2"; oId "CUFF.137720.1"; tss_id "TSS140122";
+38	Cufflinks	exon	2035130	2035282	.	-	.	gene_id "XLOC_090894"; transcript_id "TCONS_00232667"; class_code "u"; exon_number "3"; oId "CUFF.137720.1"; tss_id "TSS140122";
+38	Cufflinks	exon	14376371	14376402	.	+	.	gene_id "XLOC_090691"; transcript_id "TCONS_00231848"; class_code "u"; exon_number "1"; oId "CUFF.138839.1"; tss_id "TSS139688";
+38	Cufflinks	exon	14379626	14379742	.	+	.	gene_id "XLOC_090691"; transcript_id "TCONS_00231848"; class_code "u"; exon_number "2"; oId "CUFF.138839.1"; tss_id "TSS139688";
+38	Cufflinks	exon	14387885	14388016	.	+	.	gene_id "XLOC_090691"; transcript_id "TCONS_00231848"; class_code "u"; exon_number "3"; oId "CUFF.138839.1"; tss_id "TSS139688";
+38	Cufflinks	exon	21800610	21804309	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233514"; class_code "u"; exon_number "1"; oId "CUFF.139655.3"; tss_id "TSS140526";
+38	Cufflinks	exon	21805345	21805689	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233514"; class_code "u"; exon_number "2"; oId "CUFF.139655.3"; tss_id "TSS140526";
+38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231407"; class_code "u"; exon_number "1"; oId "CUFF.138034.3"; tss_id "TSS139475";
+38	Cufflinks	exon	516357	516387	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231407"; class_code "u"; exon_number "2"; oId "CUFF.138034.3"; tss_id "TSS139475";
 38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231407"; class_code "u"; exon_number "3"; oId "CUFF.138034.3"; tss_id "TSS139475";
-38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231409"; class_code "u"; exon_number "3"; oId "CUFF.138034.5"; tss_id "TSS139475";
-38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "2"; oId "CUFF.138034.6"; tss_id "TSS139475";
-38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231411"; class_code "u"; exon_number "3"; oId "CUFF.138034.7"; tss_id "TSS139475";
-38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231412"; class_code "u"; exon_number "3"; oId "CUFF.138034.8"; tss_id "TSS139475";
-38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231415"; class_code "u"; exon_number "2"; oId "CUFF.138034.15"; tss_id "TSS139476";
-38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231417"; class_code "u"; exon_number "2"; oId "CUFF.138034.17"; tss_id "TSS139476";
-38	Cufflinks	exon	518126	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231402"; class_code "u"; exon_number "3"; oId "CUFF.138034.10"; tss_id "TSS139475";
-38	Cufflinks	exon	518126	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231419"; class_code "u"; exon_number "2"; oId "CUFF.138034.19"; tss_id "TSS139476";
-38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "4"; oId "CUFF.138034.1"; tss_id "TSS139475";
-38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231403"; class_code "u"; exon_number "3"; oId "CUFF.138034.11"; tss_id "TSS139475";
-38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231404"; class_code "u"; exon_number "3"; oId "CUFF.138034.13"; tss_id "TSS139475";
+38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231407"; class_code "u"; exon_number "4"; oId "CUFF.138034.3"; tss_id "TSS139475";
+38	Cufflinks	exon	521313	523712	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231407"; class_code "u"; exon_number "5"; oId "CUFF.138034.3"; tss_id "TSS139475";
+38	Cufflinks	exon	524283	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231407"; class_code "u"; exon_number "6"; oId "CUFF.138034.3"; tss_id "TSS139475";
+38	Cufflinks	exon	23500593	23505172	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232434"; class_code "u"; exon_number "1"; oId "CUFF.139777.2"; tss_id "TSS140006";
+38	Cufflinks	exon	23505320	23506616	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232434"; class_code "u"; exon_number "2"; oId "CUFF.139777.2"; tss_id "TSS140006";
+38	Cufflinks	exon	23506789	23506801	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232434"; class_code "u"; exon_number "3"; oId "CUFF.139777.2"; tss_id "TSS140006";
+38	Cufflinks	exon	23507032	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232434"; class_code "u"; exon_number "4"; oId "CUFF.139777.2"; tss_id "TSS140006";
+38	Cufflinks	exon	13531698	13531757	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231828"; class_code "u"; exon_number "1"; oId "CUFF.138852.1"; tss_id "TSS139675";
+38	Cufflinks	exon	13531850	13532071	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231828"; class_code "u"; exon_number "2"; oId "CUFF.138852.1"; tss_id "TSS139675";
+38	Cufflinks	exon	13532634	13533533	.	+	.	gene_id "XLOC_090683"; transcript_id "TCONS_00231828"; class_code "u"; exon_number "3"; oId "CUFF.138852.1"; tss_id "TSS139675";
+38	Cufflinks	exon	2324275	2324538	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231609"; class_code "u"; exon_number "1"; oId "CUFF.137979.3"; tss_id "TSS139561";
+38	Cufflinks	exon	2324780	2324906	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231609"; class_code "u"; exon_number "2"; oId "CUFF.137979.3"; tss_id "TSS139561";
+38	Cufflinks	exon	2328992	2329094	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231609"; class_code "u"; exon_number "3"; oId "CUFF.137979.3"; tss_id "TSS139561";
+38	Cufflinks	exon	2334571	2335253	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231609"; class_code "u"; exon_number "4"; oId "CUFF.137979.3"; tss_id "TSS139561";
+38	Cufflinks	exon	6762159	6762622	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "1"; oId "CUFF.138464.1"; tss_id "TSS140222";
+38	Cufflinks	exon	6767020	6767144	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "2"; oId "CUFF.138464.1"; tss_id "TSS140222";
+38	Cufflinks	exon	6792300	6792351	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "3"; oId "CUFF.138464.1"; tss_id "TSS140222";
+38	Cufflinks	exon	6825061	6825159	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "4"; oId "CUFF.138464.1"; tss_id "TSS140222";
+38	Cufflinks	exon	6891548	6891649	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "5"; oId "CUFF.138464.1"; tss_id "TSS140222";
+38	Cufflinks	exon	6894487	6895011	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "6"; oId "CUFF.138464.1"; tss_id "TSS140222";
+38	Cufflinks	exon	17374920	17377148	.	+	.	gene_id "XLOC_090738"; transcript_id "TCONS_00232020"; class_code "u"; exon_number "1"; oId "CUFF.139138.10"; tss_id "TSS139770";
+38	Cufflinks	exon	17377556	17378400	.	+	.	gene_id "XLOC_090738"; transcript_id "TCONS_00232020"; class_code "u"; exon_number "2"; oId "CUFF.139138.10"; tss_id "TSS139770";
+38	Cufflinks	exon	22463938	22463964	.	+	.	gene_id "XLOC_090820"; transcript_id "TCONS_00232389"; class_code "u"; exon_number "1"; oId "CUFF.139721.1"; tss_id "TSS139973";
+38	Cufflinks	exon	22467158	22468036	.	+	.	gene_id "XLOC_090820"; transcript_id "TCONS_00232389"; class_code "u"; exon_number "2"; oId "CUFF.139721.1"; tss_id "TSS139973";
+38	Cufflinks	exon	19604005	19604029	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232089"; class_code "u"; exon_number "1"; oId "CUFF.139381.5"; tss_id "TSS139807";
+38	Cufflinks	exon	19604419	19604550	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232089"; class_code "u"; exon_number "2"; oId "CUFF.139381.5"; tss_id "TSS139807";
+38	Cufflinks	exon	19604843	19604983	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232089"; class_code "u"; exon_number "3"; oId "CUFF.139381.5"; tss_id "TSS139807";
+38	Cufflinks	exon	19605120	19609707	.	+	.	gene_id "XLOC_090752"; transcript_id "TCONS_00232089"; class_code "u"; exon_number "4"; oId "CUFF.139381.5"; tss_id "TSS139807";
+38	Cufflinks	exon	10413424	10413839	.	+	.	gene_id "XLOC_090671"; transcript_id "TCONS_00231772"; class_code "u"; exon_number "1"; oId "CUFF.138718.1"; tss_id "TSS139647";
+38	Cufflinks	exon	10414466	10414557	.	+	.	gene_id "XLOC_090671"; transcript_id "TCONS_00231772"; class_code "u"; exon_number "2"; oId "CUFF.138718.1"; tss_id "TSS139647";
+38	Cufflinks	exon	10443102	10444725	.	+	.	gene_id "XLOC_090671"; transcript_id "TCONS_00231772"; class_code "u"; exon_number "3"; oId "CUFF.138718.1"; tss_id "TSS139647";
+38	Cufflinks	exon	2129918	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231594"; class_code "u"; exon_number "1"; oId "CUFF.137733.2"; tss_id "TSS139554";
+38	Cufflinks	exon	2130311	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231594"; class_code "u"; exon_number "2"; oId "CUFF.137733.2"; tss_id "TSS139554";
+38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231594"; class_code "u"; exon_number "3"; oId "CUFF.137733.2"; tss_id "TSS139554";
+38	Cufflinks	exon	2132429	2132594	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231594"; class_code "u"; exon_number "4"; oId "CUFF.137733.2"; tss_id "TSS139554";
+38	Cufflinks	exon	2133519	2134163	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231594"; class_code "u"; exon_number "5"; oId "CUFF.137733.2"; tss_id "TSS139554";
+38	Cufflinks	exon	15223309	15223741	.	-	.	gene_id "XLOC_090985"; transcript_id "TCONS_00233030"; class_code "u"; exon_number "1"; oId "CUFF.138904.1"; tss_id "TSS140323";
+38	Cufflinks	exon	15224036	15224291	.	-	.	gene_id "XLOC_090985"; transcript_id "TCONS_00233030"; class_code "u"; exon_number "2"; oId "CUFF.138904.1"; tss_id "TSS140323";
+38	Cufflinks	exon	22298354	22300579	.	+	.	gene_id "XLOC_090817"; transcript_id "TCONS_00232386"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011795"; nearest_ref "ENSCAFT00000018715"; oId "CUFF.139717.2"; tss_id "TSS139970";
+38	Cufflinks	exon	22301794	22301867	.	+	.	gene_id "XLOC_090817"; transcript_id "TCONS_00232386"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011795"; nearest_ref "ENSCAFT00000018715"; oId "CUFF.139717.2"; tss_id "TSS139970";
+38	Cufflinks	exon	14681653	14681831	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231852"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.1"; tss_id "TSS139692";
+38	Cufflinks	exon	14691519	14691664	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231852"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.1"; tss_id "TSS139692";
+38	Cufflinks	exon	14701961	14702043	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231852"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.1"; tss_id "TSS139692";
+38	Cufflinks	exon	14703271	14711179	.	+	.	gene_id "XLOC_090694"; transcript_id "TCONS_00231852"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010842"; nearest_ref "ENSCAFT00000017240"; oId "CUFF.138925.1"; tss_id "TSS139692";
+38	Cufflinks	exon	15694920	15695252	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231945"; class_code "u"; exon_number "1"; oId "CUFF.139024.4"; tss_id "TSS139732";
+38	Cufflinks	exon	15749663	15749741	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231945"; class_code "u"; exon_number "2"; oId "CUFF.139024.4"; tss_id "TSS139732";
+38	Cufflinks	exon	15791584	15791788	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231945"; class_code "u"; exon_number "3"; oId "CUFF.139024.4"; tss_id "TSS139732";
+38	Cufflinks	exon	15798860	15799144	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231945"; class_code "u"; exon_number "4"; oId "CUFF.139024.4"; tss_id "TSS139732";
+38	Cufflinks	exon	515156	515948	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231405"; class_code "u"; exon_number "1"; oId "CUFF.138034.14"; tss_id "TSS139475";
+38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231405"; class_code "u"; exon_number "2"; oId "CUFF.138034.14"; tss_id "TSS139475";
 38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231405"; class_code "u"; exon_number "3"; oId "CUFF.138034.14"; tss_id "TSS139475";
-38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231407"; class_code "u"; exon_number "4"; oId "CUFF.138034.3"; tss_id "TSS139475";
-38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "3"; oId "CUFF.138034.6"; tss_id "TSS139475";
-38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231411"; class_code "u"; exon_number "4"; oId "CUFF.138034.7"; tss_id "TSS139475";
-38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231412"; class_code "u"; exon_number "4"; oId "CUFF.138034.8"; tss_id "TSS139475";
-38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231413"; class_code "u"; exon_number "3"; oId "CUFF.138034.9"; tss_id "TSS139475";
-38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231415"; class_code "u"; exon_number "3"; oId "CUFF.138034.15"; tss_id "TSS139476";
-38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231416"; class_code "u"; exon_number "2"; oId "CUFF.138034.16"; tss_id "TSS139476";
-38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231417"; class_code "u"; exon_number "3"; oId "CUFF.138034.17"; tss_id "TSS139476";
-38	Cufflinks	exon	519376	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231409"; class_code "u"; exon_number "4"; oId "CUFF.138034.5"; tss_id "TSS139475";
-38	Cufflinks	exon	521313	523494	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "4"; oId "CUFF.138034.6"; tss_id "TSS139475";
-38	Cufflinks	exon	521313	523712	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "5"; oId "CUFF.138034.1"; tss_id "TSS139475";
 38	Cufflinks	exon	521313	523712	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231405"; class_code "u"; exon_number "4"; oId "CUFF.138034.14"; tss_id "TSS139475";
-38	Cufflinks	exon	521313	523712	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231407"; class_code "u"; exon_number "5"; oId "CUFF.138034.3"; tss_id "TSS139475";
-38	Cufflinks	exon	521313	527048	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231403"; class_code "u"; exon_number "4"; oId "CUFF.138034.11"; tss_id "TSS139475";
-38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231404"; class_code "u"; exon_number "4"; oId "CUFF.138034.13"; tss_id "TSS139475";
-38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231411"; class_code "u"; exon_number "5"; oId "CUFF.138034.7"; tss_id "TSS139475";
-38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231412"; class_code "u"; exon_number "5"; oId "CUFF.138034.8"; tss_id "TSS139475";
-38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231413"; class_code "u"; exon_number "4"; oId "CUFF.138034.9"; tss_id "TSS139475";
-38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231415"; class_code "u"; exon_number "4"; oId "CUFF.138034.15"; tss_id "TSS139476";
-38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231416"; class_code "u"; exon_number "3"; oId "CUFF.138034.16"; tss_id "TSS139476";
-38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231417"; class_code "u"; exon_number "4"; oId "CUFF.138034.17"; tss_id "TSS139476";
-38	Cufflinks	exon	523640	523712	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "5"; oId "CUFF.138034.6"; tss_id "TSS139475";
-38	Cufflinks	exon	524283	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231401"; class_code "u"; exon_number "6"; oId "CUFF.138034.1"; tss_id "TSS139475";
-38	Cufflinks	exon	524283	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231407"; class_code "u"; exon_number "6"; oId "CUFF.138034.3"; tss_id "TSS139475";
-38	Cufflinks	exon	524283	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231410"; class_code "u"; exon_number "6"; oId "CUFF.138034.6"; tss_id "TSS139475";
-38	Cufflinks	exon	5246575	5247618	.	-	.	gene_id "XLOC_090921"; transcript_id "TCONS_00232804"; class_code "u"; exon_number "1"; oId "CUFF.138092.1"; tss_id "TSS140188";
-38	Cufflinks	exon	5246575	5247618	.	-	.	gene_id "XLOC_090921"; transcript_id "TCONS_00232805"; class_code "u"; exon_number "1"; oId "CUFF.138092.2"; tss_id "TSS140189";
-38	Cufflinks	exon	5254226	5254275	.	-	.	gene_id "XLOC_090921"; transcript_id "TCONS_00232804"; class_code "u"; exon_number "2"; oId "CUFF.138092.1"; tss_id "TSS140188";
-38	Cufflinks	exon	5279865	5280590	.	-	.	gene_id "XLOC_090921"; transcript_id "TCONS_00232805"; class_code "u"; exon_number "2"; oId "CUFF.138092.2"; tss_id "TSS140189";
-38	Cufflinks	exon	529646	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231403"; class_code "u"; exon_number "5"; oId "CUFF.138034.11"; tss_id "TSS139475";
 38	Cufflinks	exon	533362	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231405"; class_code "u"; exon_number "5"; oId "CUFF.138034.14"; tss_id "TSS139475";
-38	Cufflinks	exon	533362	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231408"; class_code "u"; exon_number "3"; oId "CUFF.138034.4"; tss_id "TSS139475";
-38	Cufflinks	exon	5563191	5563525	.	-	.	gene_id "XLOC_090922"; transcript_id "TCONS_00232806"; class_code "u"; exon_number "1"; oId "CUFF.138215.1"; tss_id "TSS140190";
-38	Cufflinks	exon	5602780	5602906	.	-	.	gene_id "XLOC_090922"; transcript_id "TCONS_00232806"; class_code "u"; exon_number "2"; oId "CUFF.138215.1"; tss_id "TSS140190";
-38	Cufflinks	exon	5604292	5604429	.	-	.	gene_id "XLOC_090922"; transcript_id "TCONS_00232806"; class_code "u"; exon_number "3"; oId "CUFF.138215.1"; tss_id "TSS140190";
-38	Cufflinks	exon	5689614	5690509	.	-	.	gene_id "XLOC_090924"; transcript_id "TCONS_00232808"; class_code "u"; exon_number "1"; oId "CUFF.138239.1"; tss_id "TSS140192";
-38	Cufflinks	exon	5691615	5692243	.	-	.	gene_id "XLOC_090924"; transcript_id "TCONS_00232808"; class_code "u"; exon_number "2"; oId "CUFF.138239.1"; tss_id "TSS140192";
-38	Cufflinks	exon	5743324	5743684	.	-	.	gene_id "XLOC_090925"; transcript_id "TCONS_00232810"; class_code "u"; exon_number "1"; oId "CUFF.138244.1"; tss_id "TSS140194";
-38	Cufflinks	exon	5761257	5761392	.	-	.	gene_id "XLOC_090925"; transcript_id "TCONS_00232810"; class_code "u"; exon_number "2"; oId "CUFF.138244.1"; tss_id "TSS140194";
-38	Cufflinks	exon	5777676	5777846	.	-	.	gene_id "XLOC_090925"; transcript_id "TCONS_00232810"; class_code "u"; exon_number "3"; oId "CUFF.138244.1"; tss_id "TSS140194";
-38	Cufflinks	exon	5778401	5778553	.	-	.	gene_id "XLOC_090925"; transcript_id "TCONS_00232810"; class_code "u"; exon_number "4"; oId "CUFF.138244.1"; tss_id "TSS140194";
-38	Cufflinks	exon	5806050	5806154	.	-	.	gene_id "XLOC_090925"; transcript_id "TCONS_00232810"; class_code "u"; exon_number "5"; oId "CUFF.138244.1"; tss_id "TSS140194";
+38	Cufflinks	exon	15736259	15737263	.	+	.	gene_id "XLOC_090721"; transcript_id "TCONS_00231948"; class_code "u"; exon_number "1"; oId "CUFF.139025.1"; tss_id "TSS139735";
+38	Cufflinks	exon	15741463	15741503	.	+	.	gene_id "XLOC_090721"; transcript_id "TCONS_00231948"; class_code "u"; exon_number "2"; oId "CUFF.139025.1"; tss_id "TSS139735";
+38	Cufflinks	exon	21560608	21561334	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232221"; class_code "u"; exon_number "1"; oId "CUFF.139571.1"; tss_id "TSS139886";
+38	Cufflinks	exon	21562308	21562409	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232221"; class_code "u"; exon_number "2"; oId "CUFF.139571.1"; tss_id "TSS139886";
+38	Cufflinks	exon	21562992	21563077	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232221"; class_code "u"; exon_number "3"; oId "CUFF.139571.1"; tss_id "TSS139886";
+38	Cufflinks	exon	21563543	21565291	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232221"; class_code "u"; exon_number "4"; oId "CUFF.139571.1"; tss_id "TSS139886";
+38	Cufflinks	exon	14620552	14621960	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232971"; class_code "u"; exon_number "1"; oId "CUFF.138906.1"; tss_id "TSS140294";
+38	Cufflinks	exon	14622096	14623007	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232971"; class_code "u"; exon_number "2"; oId "CUFF.138906.1"; tss_id "TSS140294";
+38	Cufflinks	exon	14623625	14624208	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232971"; class_code "u"; exon_number "3"; oId "CUFF.138906.1"; tss_id "TSS140294";
+38	Cufflinks	exon	14624298	14625151	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232971"; class_code "u"; exon_number "4"; oId "CUFF.138906.1"; tss_id "TSS140294";
+38	Cufflinks	exon	22088138	22090081	.	-	.	gene_id "XLOC_091067"; transcript_id "TCONS_00233569"; class_code "u"; exon_number "1"; oId "CUFF.139673.2"; tss_id "TSS140559";
+38	Cufflinks	exon	22090149	22090218	.	-	.	gene_id "XLOC_091067"; transcript_id "TCONS_00233569"; class_code "u"; exon_number "2"; oId "CUFF.139673.2"; tss_id "TSS140559";
+38	Cufflinks	exon	13336795	13340728	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232948"; class_code "u"; exon_number "1"; oId "CUFF.138809.2"; tss_id "TSS140273";
+38	Cufflinks	exon	13342125	13342206	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232948"; class_code "u"; exon_number "2"; oId "CUFF.138809.2"; tss_id "TSS140273";
+38	Cufflinks	exon	13361261	13361531	.	-	.	gene_id "XLOC_090961"; transcript_id "TCONS_00232948"; class_code "u"; exon_number "3"; oId "CUFF.138809.2"; tss_id "TSS140273";
+38	Cufflinks	exon	15677388	15677508	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231942"; class_code "u"; exon_number "1"; oId "CUFF.139024.1"; tss_id "TSS139731";
+38	Cufflinks	exon	15684558	15684725	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231942"; class_code "u"; exon_number "2"; oId "CUFF.139024.1"; tss_id "TSS139731";
+38	Cufflinks	exon	15684908	15687117	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231942"; class_code "u"; exon_number "3"; oId "CUFF.139024.1"; tss_id "TSS139731";
+38	Cufflinks	exon	20999665	20999943	.	-	.	gene_id "XLOC_091031"; transcript_id "TCONS_00233349"; class_code "u"; exon_number "1"; oId "CUFF.139538.1"; tss_id "TSS140465";
+38	Cufflinks	exon	21001214	21001493	.	-	.	gene_id "XLOC_091031"; transcript_id "TCONS_00233349"; class_code "u"; exon_number "2"; oId "CUFF.139538.1"; tss_id "TSS140465";
 38	Cufflinks	exon	5947783	5947860	.	+	.	gene_id "XLOC_090658"; transcript_id "TCONS_00231722"; class_code "u"; exon_number "1"; oId "CUFF.138260.1"; tss_id "TSS139616";
 38	Cufflinks	exon	5948728	5949171	.	+	.	gene_id "XLOC_090658"; transcript_id "TCONS_00231722"; class_code "u"; exon_number "2"; oId "CUFF.138260.1"; tss_id "TSS139616";
-38	Cufflinks	exon	5990801	5990843	.	+	.	gene_id "XLOC_090660"; transcript_id "TCONS_00231733"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010552"; nearest_ref "ENSCAFT00000016789"; oId "CUFF.138298.1"; tss_id "TSS139625";
-38	Cufflinks	exon	5997900	5999132	.	+	.	gene_id "XLOC_090660"; transcript_id "TCONS_00231733"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010552"; nearest_ref "ENSCAFT00000016789"; oId "CUFF.138298.1"; tss_id "TSS139625";
-38	Cufflinks	exon	6121311	6121335	.	+	.	gene_id "XLOC_090662"; transcript_id "TCONS_00231753"; class_code "u"; exon_number "1"; oId "CUFF.138258.1"; tss_id "TSS139630";
-38	Cufflinks	exon	6129505	6131310	.	+	.	gene_id "XLOC_090662"; transcript_id "TCONS_00231753"; class_code "u"; exon_number "2"; oId "CUFF.138258.1"; tss_id "TSS139630";
-38	Cufflinks	exon	6453472	6453791	.	+	.	gene_id "XLOC_090664"; transcript_id "TCONS_00231756"; class_code "u"; exon_number "1"; oId "CUFF.138315.1"; tss_id "TSS139633";
-38	Cufflinks	exon	6454379	6454536	.	+	.	gene_id "XLOC_090664"; transcript_id "TCONS_00231756"; class_code "u"; exon_number "2"; oId "CUFF.138315.1"; tss_id "TSS139633";
-38	Cufflinks	exon	6464589	6464857	.	+	.	gene_id "XLOC_090664"; transcript_id "TCONS_00231756"; class_code "u"; exon_number "3"; oId "CUFF.138315.1"; tss_id "TSS139633";
-38	Cufflinks	exon	6762159	6762622	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "1"; oId "CUFF.138464.1"; tss_id "TSS140222";
-38	Cufflinks	exon	6767020	6767144	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "2"; oId "CUFF.138464.1"; tss_id "TSS140222";
-38	Cufflinks	exon	6767022	6767144	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "1"; oId "CUFF.138464.2"; tss_id "TSS140222";
-38	Cufflinks	exon	6792300	6792351	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "3"; oId "CUFF.138464.1"; tss_id "TSS140222";
-38	Cufflinks	exon	6792300	6792351	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "2"; oId "CUFF.138464.2"; tss_id "TSS140222";
-38	Cufflinks	exon	6797929	6798143	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "3"; oId "CUFF.138464.2"; tss_id "TSS140222";
-38	Cufflinks	exon	6825061	6825159	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "4"; oId "CUFF.138464.1"; tss_id "TSS140222";
-38	Cufflinks	exon	6825061	6825159	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "4"; oId "CUFF.138464.2"; tss_id "TSS140222";
+38	Cufflinks	exon	15385775	15387460	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231908"; class_code "u"; exon_number "1"; oId "CUFF.138911.1"; tss_id "TSS139710";
+38	Cufflinks	exon	15390507	15390631	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231908"; class_code "u"; exon_number "2"; oId "CUFF.138911.1"; tss_id "TSS139710";
+38	Cufflinks	exon	15392302	15393571	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231908"; class_code "u"; exon_number "3"; oId "CUFF.138911.1"; tss_id "TSS139710";
+38	Cufflinks	exon	15385775	15386819	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231907"; class_code "u"; exon_number "1"; oId "CUFF.138911.3"; tss_id "TSS139710";
+38	Cufflinks	exon	15387359	15387460	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231907"; class_code "u"; exon_number "2"; oId "CUFF.138911.3"; tss_id "TSS139710";
+38	Cufflinks	exon	15388147	15388448	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231907"; class_code "u"; exon_number "3"; oId "CUFF.138911.3"; tss_id "TSS139710";
+38	Cufflinks	exon	2136847	2136872	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231602"; class_code "u"; exon_number "1"; oId "CUFF.137733.10"; tss_id "TSS139556";
+38	Cufflinks	exon	2143678	2144988	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231602"; class_code "u"; exon_number "2"; oId "CUFF.137733.10"; tss_id "TSS139556";
+38	Cufflinks	exon	742766	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
+38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
+38	Cufflinks	exon	744581	746943	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
+38	Cufflinks	exon	750023	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
+38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
+38	Cufflinks	exon	750936	751381	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
+38	Cufflinks	exon	751770	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
+38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
+38	Cufflinks	exon	16530336	16530599	.	+	.	gene_id "XLOC_090729"; transcript_id "TCONS_00231961"; class_code "u"; exon_number "1"; oId "CUFF.139042.1"; tss_id "TSS139746";
+38	Cufflinks	exon	16531197	16531365	.	+	.	gene_id "XLOC_090729"; transcript_id "TCONS_00231961"; class_code "u"; exon_number "2"; oId "CUFF.139042.1"; tss_id "TSS139746";
+38	Cufflinks	exon	16547679	16548345	.	+	.	gene_id "XLOC_090729"; transcript_id "TCONS_00231961"; class_code "u"; exon_number "3"; oId "CUFF.139042.1"; tss_id "TSS139746";
+38	Cufflinks	exon	22297942	22298159	.	+	.	gene_id "XLOC_090817"; transcript_id "TCONS_00232385"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000011795"; nearest_ref "ENSCAFT00000018715"; oId "CUFF.139717.1"; tss_id "TSS139969";
+38	Cufflinks	exon	22298956	22300579	.	+	.	gene_id "XLOC_090817"; transcript_id "TCONS_00232385"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000011795"; nearest_ref "ENSCAFT00000018715"; oId "CUFF.139717.1"; tss_id "TSS139969";
+38	Cufflinks	exon	22301883	22301952	.	+	.	gene_id "XLOC_090817"; transcript_id "TCONS_00232385"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000011795"; nearest_ref "ENSCAFT00000018715"; oId "CUFF.139717.1"; tss_id "TSS139969";
+38	Cufflinks	exon	1185983	1186688	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232593"; class_code "u"; exon_number "1"; oId "CUFF.137647.13"; tss_id "TSS140087";
+38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232593"; class_code "u"; exon_number "2"; oId "CUFF.137647.13"; tss_id "TSS140087";
+38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232593"; class_code "u"; exon_number "3"; oId "CUFF.137647.13"; tss_id "TSS140087";
+38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232593"; class_code "u"; exon_number "4"; oId "CUFF.137647.13"; tss_id "TSS140087";
+38	Cufflinks	exon	1217209	1217387	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232593"; class_code "u"; exon_number "5"; oId "CUFF.137647.13"; tss_id "TSS140087";
+38	Cufflinks	exon	7700583	7702635	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232872"; class_code "u"; exon_number "1"; oId "CUFF.138454.2"; tss_id "TSS140224";
+38	Cufflinks	exon	7750752	7750882	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232872"; class_code "u"; exon_number "2"; oId "CUFF.138454.2"; tss_id "TSS140224";
+38	Cufflinks	exon	7751653	7751717	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232872"; class_code "u"; exon_number "3"; oId "CUFF.138454.2"; tss_id "TSS140224";
+38	Cufflinks	exon	7752073	7752248	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232872"; class_code "u"; exon_number "4"; oId "CUFF.138454.2"; tss_id "TSS140224";
+38	Cufflinks	exon	21775472	21775799	.	+	.	gene_id "XLOC_090794"; transcript_id "TCONS_00232274"; class_code "u"; exon_number "1"; oId "CUFF.139651.1"; tss_id "TSS139907";
+38	Cufflinks	exon	21784064	21784281	.	+	.	gene_id "XLOC_090794"; transcript_id "TCONS_00232274"; class_code "u"; exon_number "2"; oId "CUFF.139651.1"; tss_id "TSS139907";
+38	Cufflinks	exon	14342010	14349179	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232964"; class_code "u"; exon_number "1"; oId "CUFF.138879.2"; tss_id "TSS140287";
+38	Cufflinks	exon	14357755	14358297	.	-	.	gene_id "XLOC_090970"; transcript_id "TCONS_00232964"; class_code "u"; exon_number "2"; oId "CUFF.138879.2"; tss_id "TSS140287";
+38	Cufflinks	exon	742766	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
+38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
+38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
+38	Cufflinks	exon	744578	745569	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
+38	Cufflinks	exon	746561	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
+38	Cufflinks	exon	750260	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
+38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
+38	Cufflinks	exon	2324264	2324538	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231607"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.1"; tss_id "TSS139561";
+38	Cufflinks	exon	2328992	2329094	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231607"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.1"; tss_id "TSS139561";
+38	Cufflinks	exon	2334571	2334824	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231607"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.1"; tss_id "TSS139561";
+38	Cufflinks	exon	2340139	2340270	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231607"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.1"; tss_id "TSS139561";
+38	Cufflinks	exon	2340736	2342639	.	+	.	gene_id "XLOC_090639"; transcript_id "TCONS_00231607"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010198"; nearest_ref "ENSCAFT00000016185"; oId "CUFF.137979.1"; tss_id "TSS139561";
+38	Cufflinks	exon	1912606	1912887	.	-	.	gene_id "XLOC_090891"; transcript_id "TCONS_00232655"; class_code "u"; exon_number "1"; oId "CUFF.137665.1"; tss_id "TSS140114";
+38	Cufflinks	exon	1914857	1918120	.	-	.	gene_id "XLOC_090891"; transcript_id "TCONS_00232655"; class_code "u"; exon_number "2"; oId "CUFF.137665.1"; tss_id "TSS140114";
+38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232657"; class_code "u"; exon_number "1"; oId "CUFF.137678.4"; tss_id "TSS140115";
+38	Cufflinks	exon	1920560	1921420	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232657"; class_code "u"; exon_number "2"; oId "CUFF.137678.4"; tss_id "TSS140115";
+38	Cufflinks	exon	1922478	1922498	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232657"; class_code "u"; exon_number "3"; oId "CUFF.137678.4"; tss_id "TSS140115";
+38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232658"; class_code "u"; exon_number "1"; oId "CUFF.137678.2"; tss_id "TSS140116";
+38	Cufflinks	exon	1920560	1923003	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232658"; class_code "u"; exon_number "2"; oId "CUFF.137678.2"; tss_id "TSS140116";
+38	Cufflinks	exon	14149067	14149369	.	-	.	gene_id "XLOC_090968"; transcript_id "TCONS_00232961"; class_code "u"; exon_number "1"; oId "CUFF.138821.1"; tss_id "TSS140284";
+38	Cufflinks	exon	14149594	14150270	.	-	.	gene_id "XLOC_090968"; transcript_id "TCONS_00232961"; class_code "u"; exon_number "2"; oId "CUFF.138821.1"; tss_id "TSS140284";
+38	Cufflinks	exon	1646611	1646872	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231532"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.2"; tss_id "TSS139523";
+38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231532"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.2"; tss_id "TSS139523";
+38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231532"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.2"; tss_id "TSS139523";
+38	Cufflinks	exon	1702405	1702725	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231532"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.2"; tss_id "TSS139523";
+38	Cufflinks	exon	17776387	17776462	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "1"; oId "CUFF.139126.3"; tss_id "TSS139789";
+38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "2"; oId "CUFF.139126.3"; tss_id "TSS139789";
+38	Cufflinks	exon	17781481	17782059	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "3"; oId "CUFF.139126.3"; tss_id "TSS139789";
+38	Cufflinks	exon	17782418	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "4"; oId "CUFF.139126.3"; tss_id "TSS139789";
+38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "5"; oId "CUFF.139126.3"; tss_id "TSS139789";
+38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "6"; oId "CUFF.139126.3"; tss_id "TSS139789";
+38	Cufflinks	exon	17798695	17798844	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "7"; oId "CUFF.139126.3"; tss_id "TSS139789";
+38	Cufflinks	exon	17805058	17805243	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "8"; oId "CUFF.139126.3"; tss_id "TSS139789";
+38	Cufflinks	exon	17807870	17808287	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232055"; class_code "u"; exon_number "9"; oId "CUFF.139126.3"; tss_id "TSS139789";
+38	Cufflinks	exon	21859927	21862318	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233539"; class_code "u"; exon_number "1"; oId "CUFF.139665.2"; tss_id "TSS140542";
+38	Cufflinks	exon	21862693	21862860	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233539"; class_code "u"; exon_number "2"; oId "CUFF.139665.2"; tss_id "TSS140542";
+38	Cufflinks	exon	21863481	21867420	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233539"; class_code "u"; exon_number "3"; oId "CUFF.139665.2"; tss_id "TSS140542";
+38	Cufflinks	exon	7699086	7699762	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232871"; class_code "u"; exon_number "1"; oId "CUFF.138454.1"; tss_id "TSS140224";
+38	Cufflinks	exon	7750752	7750882	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232871"; class_code "u"; exon_number "2"; oId "CUFF.138454.1"; tss_id "TSS140224";
+38	Cufflinks	exon	7751653	7751717	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232871"; class_code "u"; exon_number "3"; oId "CUFF.138454.1"; tss_id "TSS140224";
+38	Cufflinks	exon	7752073	7752248	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232871"; class_code "u"; exon_number "4"; oId "CUFF.138454.1"; tss_id "TSS140224";
+38	Cufflinks	exon	1659097	1659115	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231539"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.6"; tss_id "TSS139525";
+38	Cufflinks	exon	1662966	1664861	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231539"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.6"; tss_id "TSS139525";
+38	Cufflinks	exon	1665917	1666104	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231539"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.6"; tss_id "TSS139525";
+38	Cufflinks	exon	1676534	1676549	.	+	.	gene_id "XLOC_090620"; transcript_id "TCONS_00231539"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009999"; nearest_ref "ENSCAFT00000015918"; oId "CUFF.137744.6"; tss_id "TSS139525";
 38	Cufflinks	exon	6829484	6829895	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232869"; class_code "u"; exon_number "1"; oId "CUFF.138464.3"; tss_id "TSS140222";
 38	Cufflinks	exon	6890688	6891160	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232869"; class_code "u"; exon_number "2"; oId "CUFF.138464.3"; tss_id "TSS140222";
-38	Cufflinks	exon	6891548	6891649	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "5"; oId "CUFF.138464.1"; tss_id "TSS140222";
-38	Cufflinks	exon	6891548	6891649	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "5"; oId "CUFF.138464.2"; tss_id "TSS140222";
 38	Cufflinks	exon	6891548	6891649	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232869"; class_code "u"; exon_number "3"; oId "CUFF.138464.3"; tss_id "TSS140222";
-38	Cufflinks	exon	6894487	6895011	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232867"; class_code "u"; exon_number "6"; oId "CUFF.138464.1"; tss_id "TSS140222";
-38	Cufflinks	exon	6894487	6895011	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232868"; class_code "u"; exon_number "6"; oId "CUFF.138464.2"; tss_id "TSS140222";
 38	Cufflinks	exon	6894824	6895011	.	-	.	gene_id "XLOC_090937"; transcript_id "TCONS_00232869"; class_code "u"; exon_number "4"; oId "CUFF.138464.3"; tss_id "TSS140222";
-38	Cufflinks	exon	7326701	7326855	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231757"; class_code "u"; exon_number "1"; oId "CUFF.138465.1"; tss_id "TSS139634";
-38	Cufflinks	exon	7355075	7355258	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231758"; class_code "u"; exon_number "1"; oId "CUFF.138465.2"; tss_id "TSS139635";
-38	Cufflinks	exon	7355758	7355834	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231757"; class_code "u"; exon_number "2"; oId "CUFF.138465.1"; tss_id "TSS139634";
-38	Cufflinks	exon	7355758	7355834	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231758"; class_code "u"; exon_number "2"; oId "CUFF.138465.2"; tss_id "TSS139635";
-38	Cufflinks	exon	7376399	7376811	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231757"; class_code "u"; exon_number "3"; oId "CUFF.138465.1"; tss_id "TSS139634";
-38	Cufflinks	exon	741113	741166	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
-38	Cufflinks	exon	741252	741350	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
-38	Cufflinks	exon	741269	741350	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
-38	Cufflinks	exon	741271	741350	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
-38	Cufflinks	exon	742766	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
-38	Cufflinks	exon	742766	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231447"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.12"; tss_id "TSS139492";
-38	Cufflinks	exon	742766	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
-38	Cufflinks	exon	742766	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
+38	Cufflinks	exon	6121311	6121335	.	+	.	gene_id "XLOC_090662"; transcript_id "TCONS_00231753"; class_code "u"; exon_number "1"; oId "CUFF.138258.1"; tss_id "TSS139630";
+38	Cufflinks	exon	6129505	6131310	.	+	.	gene_id "XLOC_090662"; transcript_id "TCONS_00231753"; class_code "u"; exon_number "2"; oId "CUFF.138258.1"; tss_id "TSS139630";
+38	Cufflinks	exon	21110487	21110512	.	+	.	gene_id "XLOC_090763"; transcript_id "TCONS_00232139"; class_code "u"; exon_number "1"; oId "CUFF.139529.1"; tss_id "TSS139829";
+38	Cufflinks	exon	21112890	21114529	.	+	.	gene_id "XLOC_090763"; transcript_id "TCONS_00232139"; class_code "u"; exon_number "2"; oId "CUFF.139529.1"; tss_id "TSS139829";
+38	Cufflinks	exon	21561256	21561334	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232223"; class_code "u"; exon_number "1"; oId "CUFF.139571.3"; tss_id "TSS139888";
+38	Cufflinks	exon	21562308	21562409	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232223"; class_code "u"; exon_number "2"; oId "CUFF.139571.3"; tss_id "TSS139888";
+38	Cufflinks	exon	21562778	21563077	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232223"; class_code "u"; exon_number "3"; oId "CUFF.139571.3"; tss_id "TSS139888";
+38	Cufflinks	exon	21563543	21565291	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232223"; class_code "u"; exon_number "4"; oId "CUFF.139571.3"; tss_id "TSS139888";
+38	Cufflinks	exon	1185983	1186691	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232595"; class_code "u"; exon_number "1"; oId "CUFF.137647.14"; tss_id "TSS140087";
+38	Cufflinks	exon	1186818	1187098	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232595"; class_code "u"; exon_number "2"; oId "CUFF.137647.14"; tss_id "TSS140087";
+38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232595"; class_code "u"; exon_number "3"; oId "CUFF.137647.14"; tss_id "TSS140087";
+38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232595"; class_code "u"; exon_number "4"; oId "CUFF.137647.14"; tss_id "TSS140087";
+38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232595"; class_code "u"; exon_number "5"; oId "CUFF.137647.14"; tss_id "TSS140087";
+38	Cufflinks	exon	2129918	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231593"; class_code "u"; exon_number "1"; oId "CUFF.137733.1"; tss_id "TSS139554";
+38	Cufflinks	exon	2130311	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231593"; class_code "u"; exon_number "2"; oId "CUFF.137733.1"; tss_id "TSS139554";
+38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231593"; class_code "u"; exon_number "3"; oId "CUFF.137733.1"; tss_id "TSS139554";
+38	Cufflinks	exon	2133519	2134163	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231593"; class_code "u"; exon_number "4"; oId "CUFF.137733.1"; tss_id "TSS139554";
+38	Cufflinks	exon	3500084	3500390	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "1"; oId "CUFF.137777.1"; tss_id "TSS139607";
+38	Cufflinks	exon	3536925	3537070	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "2"; oId "CUFF.137777.1"; tss_id "TSS139607";
+38	Cufflinks	exon	3539078	3539705	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "3"; oId "CUFF.137777.1"; tss_id "TSS139607";
+38	Cufflinks	exon	3540310	3540409	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "4"; oId "CUFF.137777.1"; tss_id "TSS139607";
+38	Cufflinks	exon	3540663	3540724	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "5"; oId "CUFF.137777.1"; tss_id "TSS139607";
+38	Cufflinks	exon	3543341	3543387	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "6"; oId "CUFF.137777.1"; tss_id "TSS139607";
+38	Cufflinks	exon	3544049	3544723	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231711"; class_code "u"; exon_number "7"; oId "CUFF.137777.1"; tss_id "TSS139607";
+38	Cufflinks	exon	16503207	16503235	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233057"; class_code "u"; exon_number "1"; oId "CUFF.139062.3"; tss_id "TSS140341";
+38	Cufflinks	exon	16521012	16521125	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233057"; class_code "u"; exon_number "2"; oId "CUFF.139062.3"; tss_id "TSS140341";
+38	Cufflinks	exon	16522730	16522795	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233057"; class_code "u"; exon_number "3"; oId "CUFF.139062.3"; tss_id "TSS140341";
+38	Cufflinks	exon	16530020	16530180	.	-	.	gene_id "XLOC_090992"; transcript_id "TCONS_00233057"; class_code "u"; exon_number "4"; oId "CUFF.139062.3"; tss_id "TSS140341";
+38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232659"; class_code "u"; exon_number "1"; oId "CUFF.137678.7"; tss_id "TSS140116";
+38	Cufflinks	exon	1920299	1923037	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232659"; class_code "u"; exon_number "2"; oId "CUFF.137678.7"; tss_id "TSS140116";
+38	Cufflinks	exon	21859927	21862318	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233536"; class_code "u"; exon_number "1"; oId "CUFF.139665.5"; tss_id "TSS140540";
+38	Cufflinks	exon	21862693	21863343	.	-	.	gene_id "XLOC_091060"; transcript_id "TCONS_00233536"; class_code "u"; exon_number "2"; oId "CUFF.139665.5"; tss_id "TSS140540";
+38	Cufflinks	exon	14030575	14030648	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232960"; class_code "u"; exon_number "1"; oId "CUFF.138970.5"; tss_id "TSS140282";
+38	Cufflinks	exon	14050396	14050465	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232960"; class_code "u"; exon_number "2"; oId "CUFF.138970.5"; tss_id "TSS140282";
+38	Cufflinks	exon	14077181	14077299	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232960"; class_code "u"; exon_number "3"; oId "CUFF.138970.5"; tss_id "TSS140282";
+38	Cufflinks	exon	14098539	14098634	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232960"; class_code "u"; exon_number "4"; oId "CUFF.138970.5"; tss_id "TSS140282";
+38	Cufflinks	exon	14099377	14099444	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232960"; class_code "u"; exon_number "5"; oId "CUFF.138970.5"; tss_id "TSS140282";
 38	Cufflinks	exon	742766	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
-38	Cufflinks	exon	742766	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231451"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.8"; tss_id "TSS139492";
-38	Cufflinks	exon	742766	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
-38	Cufflinks	exon	742766	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
-38	Cufflinks	exon	742767	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231453"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.13"; tss_id "TSS139492";
-38	Cufflinks	exon	742837	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
-38	Cufflinks	exon	7435442	7435524	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231758"; class_code "u"; exon_number "3"; oId "CUFF.138465.2"; tss_id "TSS139635";
-38	Cufflinks	exon	7435626	7436483	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231758"; class_code "u"; exon_number "4"; oId "CUFF.138465.2"; tss_id "TSS139635";
-38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
-38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
-38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
-38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
+38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
+38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
+38	Cufflinks	exon	744578	746943	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
+38	Cufflinks	exon	750023	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
+38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
+38	Cufflinks	exon	750936	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
+38	Cufflinks	exon	16317356	16317667	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "1"; oId "CUFF.139050.1"; tss_id "TSS139740";
+38	Cufflinks	exon	16329120	16329247	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "2"; oId "CUFF.139050.1"; tss_id "TSS139740";
+38	Cufflinks	exon	16331120	16331219	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "3"; oId "CUFF.139050.1"; tss_id "TSS139740";
+38	Cufflinks	exon	16331439	16331577	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "4"; oId "CUFF.139050.1"; tss_id "TSS139740";
+38	Cufflinks	exon	16333656	16333747	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "5"; oId "CUFF.139050.1"; tss_id "TSS139740";
+38	Cufflinks	exon	16334487	16336248	.	+	.	gene_id "XLOC_090725"; transcript_id "TCONS_00231953"; class_code "u"; exon_number "6"; oId "CUFF.139050.1"; tss_id "TSS139740";
+38	Cufflinks	exon	23500593	23506616	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232433"; class_code "u"; exon_number "1"; oId "CUFF.139777.1"; tss_id "TSS140006";
+38	Cufflinks	exon	23507019	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232433"; class_code "u"; exon_number "2"; oId "CUFF.139777.1"; tss_id "TSS140006";
+38	Cufflinks	exon	22820029	22822125	.	-	.	gene_id "XLOC_091093"; transcript_id "TCONS_00233633"; class_code "u"; exon_number "1"; oId "CUFF.139749.1"; tss_id "TSS140604";
+38	Cufflinks	exon	22822590	22823165	.	-	.	gene_id "XLOC_091093"; transcript_id "TCONS_00233633"; class_code "u"; exon_number "2"; oId "CUFF.139749.1"; tss_id "TSS140604";
+38	Cufflinks	exon	22081497	22081574	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232319"; class_code "u"; exon_number "1"; oId "CUFF.139671.2"; tss_id "TSS139928";
+38	Cufflinks	exon	22089898	22092743	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232319"; class_code "u"; exon_number "2"; oId "CUFF.139671.2"; tss_id "TSS139928";
+38	Cufflinks	exon	15724630	15724845	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231947"; class_code "u"; exon_number "1"; oId "CUFF.139024.6"; tss_id "TSS139734";
+38	Cufflinks	exon	15749663	15749741	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231947"; class_code "u"; exon_number "2"; oId "CUFF.139024.6"; tss_id "TSS139734";
+38	Cufflinks	exon	15798860	15799144	.	+	.	gene_id "XLOC_090720"; transcript_id "TCONS_00231947"; class_code "u"; exon_number "3"; oId "CUFF.139024.6"; tss_id "TSS139734";
+38	Cufflinks	exon	21800610	21804268	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233515"; class_code "u"; exon_number "1"; oId "CUFF.139655.1"; tss_id "TSS140527";
+38	Cufflinks	exon	21805430	21805531	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233515"; class_code "u"; exon_number "2"; oId "CUFF.139655.1"; tss_id "TSS140527";
+38	Cufflinks	exon	21806053	21806062	.	-	.	gene_id "XLOC_091058"; transcript_id "TCONS_00233515"; class_code "u"; exon_number "3"; oId "CUFF.139655.1"; tss_id "TSS140527";
+38	Cufflinks	exon	15385775	15387460	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231910"; class_code "u"; exon_number "1"; oId "CUFF.138911.2"; tss_id "TSS139710";
+38	Cufflinks	exon	15390507	15390631	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231910"; class_code "u"; exon_number "2"; oId "CUFF.138911.2"; tss_id "TSS139710";
+38	Cufflinks	exon	15409535	15409842	.	+	.	gene_id "XLOC_090707"; transcript_id "TCONS_00231910"; class_code "u"; exon_number "3"; oId "CUFF.138911.2"; tss_id "TSS139710";
+38	Cufflinks	exon	22873643	22873746	.	+	.	gene_id "XLOC_090829"; transcript_id "TCONS_00232405"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000025115"; nearest_ref "ENSCAFT00000018582"; oId "CUFF.139989.1"; tss_id "TSS139983";
+38	Cufflinks	exon	22873862	22875194	.	+	.	gene_id "XLOC_090829"; transcript_id "TCONS_00232405"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000025115"; nearest_ref "ENSCAFT00000018582"; oId "CUFF.139989.1"; tss_id "TSS139983";
+38	Cufflinks	exon	1296740	1297292	.	+	.	gene_id "XLOC_090615"; transcript_id "TCONS_00231491"; class_code "u"; exon_number "1"; oId "CUFF.137637.1"; tss_id "TSS139509";
+38	Cufflinks	exon	1322420	1322461	.	+	.	gene_id "XLOC_090615"; transcript_id "TCONS_00231491"; class_code "u"; exon_number "2"; oId "CUFF.137637.1"; tss_id "TSS139509";
+38	Cufflinks	exon	22943810	22944782	.	+	.	gene_id "XLOC_090831"; transcript_id "TCONS_00232408"; class_code "u"; exon_number "1"; oId "CUFF.139740.1"; tss_id "TSS139985";
+38	Cufflinks	exon	22945570	22946112	.	+	.	gene_id "XLOC_090831"; transcript_id "TCONS_00232408"; class_code "u"; exon_number "2"; oId "CUFF.139740.1"; tss_id "TSS139985";
+38	Cufflinks	exon	22081432	22081574	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232318"; class_code "u"; exon_number "1"; oId "CUFF.139671.1"; tss_id "TSS139928";
+38	Cufflinks	exon	22090158	22090248	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232318"; class_code "u"; exon_number "2"; oId "CUFF.139671.1"; tss_id "TSS139928";
+38	Cufflinks	exon	22091338	22092743	.	+	.	gene_id "XLOC_090802"; transcript_id "TCONS_00232318"; class_code "u"; exon_number "3"; oId "CUFF.139671.1"; tss_id "TSS139928";
+38	Cufflinks	exon	1918275	1919330	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232661"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.3"; tss_id "TSS140118";
+38	Cufflinks	exon	1928136	1928213	.	-	.	gene_id "XLOC_090892"; transcript_id "TCONS_00232661"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000020616"; nearest_ref "ENSCAFT00000032723"; oId "CUFF.137678.3"; tss_id "TSS140118";
+38	Cufflinks	exon	16462049	16462310	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233054"; class_code "u"; exon_number "1"; oId "CUFF.139060.3"; tss_id "TSS140339";
+38	Cufflinks	exon	16462545	16462668	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233054"; class_code "u"; exon_number "2"; oId "CUFF.139060.3"; tss_id "TSS140339";
+38	Cufflinks	exon	16462972	16463028	.	-	.	gene_id "XLOC_090991"; transcript_id "TCONS_00233054"; class_code "u"; exon_number "3"; oId "CUFF.139060.3"; tss_id "TSS140339";
+38	Cufflinks	exon	2092068	2092820	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231591"; class_code "u"; exon_number "1"; oId "CUFF.137741.4"; tss_id "TSS139552";
+38	Cufflinks	exon	2093797	2094320	.	+	.	gene_id "XLOC_090633"; transcript_id "TCONS_00231591"; class_code "u"; exon_number "2"; oId "CUFF.137741.4"; tss_id "TSS139552";
+38	Cufflinks	exon	14324285	14330808	.	+	.	gene_id "XLOC_090690"; transcript_id "TCONS_00231845"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000021604"; nearest_ref "ENSCAFT00000033711"; oId "CUFF.138877.1"; tss_id "TSS139685";
+38	Cufflinks	exon	14343297	14360478	.	+	.	gene_id "XLOC_090690"; transcript_id "TCONS_00231845"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000021604"; nearest_ref "ENSCAFT00000033711"; oId "CUFF.138877.1"; tss_id "TSS139685";
+38	Cufflinks	exon	14360579	14371848	.	+	.	gene_id "XLOC_090690"; transcript_id "TCONS_00231845"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000021604"; nearest_ref "ENSCAFT00000033711"; oId "CUFF.138877.1"; tss_id "TSS139685";
+38	Cufflinks	exon	19507549	19508594	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233149"; class_code "u"; exon_number "1"; oId "CUFF.139379.1"; tss_id "TSS140389";
+38	Cufflinks	exon	19508997	19509216	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233149"; class_code "u"; exon_number "2"; oId "CUFF.139379.1"; tss_id "TSS140389";
+38	Cufflinks	exon	19509838	19509927	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233149"; class_code "u"; exon_number "3"; oId "CUFF.139379.1"; tss_id "TSS140389";
+38	Cufflinks	exon	19518322	19518924	.	-	.	gene_id "XLOC_091013"; transcript_id "TCONS_00233149"; class_code "u"; exon_number "4"; oId "CUFF.139379.1"; tss_id "TSS140389";
+38	Cufflinks	exon	21020477	21021490	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233351"; class_code "u"; exon_number "1"; oId "CUFF.139547.1"; tss_id "TSS140467";
+38	Cufflinks	exon	21022238	21022364	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233351"; class_code "u"; exon_number "2"; oId "CUFF.139547.1"; tss_id "TSS140467";
+38	Cufflinks	exon	21039362	21039555	.	-	.	gene_id "XLOC_091032"; transcript_id "TCONS_00233351"; class_code "u"; exon_number "3"; oId "CUFF.139547.1"; tss_id "TSS140467";
+38	Cufflinks	exon	22349895	22351433	.	-	.	gene_id "XLOC_091083"; transcript_id "TCONS_00233601"; class_code "u"; exon_number "1"; oId "CUFF.139706.1"; tss_id "TSS140582";
+38	Cufflinks	exon	22353488	22353807	.	-	.	gene_id "XLOC_091083"; transcript_id "TCONS_00233601"; class_code "u"; exon_number "2"; oId "CUFF.139706.1"; tss_id "TSS140582";
+38	Cufflinks	exon	2129920	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231598"; class_code "u"; exon_number "1"; oId "CUFF.137733.6"; tss_id "TSS139554";
+38	Cufflinks	exon	2130311	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231598"; class_code "u"; exon_number "2"; oId "CUFF.137733.6"; tss_id "TSS139554";
+38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231598"; class_code "u"; exon_number "3"; oId "CUFF.137733.6"; tss_id "TSS139554";
+38	Cufflinks	exon	2143678	2144988	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231598"; class_code "u"; exon_number "4"; oId "CUFF.137733.6"; tss_id "TSS139554";
+38	Cufflinks	exon	1185983	1186691	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "1"; oId "CUFF.137647.21"; tss_id "TSS140087";
+38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "2"; oId "CUFF.137647.21"; tss_id "TSS140087";
+38	Cufflinks	exon	1187119	1187262	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "3"; oId "CUFF.137647.21"; tss_id "TSS140087";
+38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "4"; oId "CUFF.137647.21"; tss_id "TSS140087";
+38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "5"; oId "CUFF.137647.21"; tss_id "TSS140087";
+38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "6"; oId "CUFF.137647.21"; tss_id "TSS140087";
+38	Cufflinks	exon	1217209	1217444	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232603"; class_code "u"; exon_number "7"; oId "CUFF.137647.21"; tss_id "TSS140087";
+38	Cufflinks	exon	21873957	21874564	.	-	.	gene_id "XLOC_091062"; transcript_id "TCONS_00233543"; class_code "u"; exon_number "1"; oId "CUFF.139664.1"; tss_id "TSS140544";
+38	Cufflinks	exon	21875052	21876533	.	-	.	gene_id "XLOC_091062"; transcript_id "TCONS_00233543"; class_code "u"; exon_number "2"; oId "CUFF.139664.1"; tss_id "TSS140544";
+38	Cufflinks	exon	21792906	21793910	.	-	.	gene_id "XLOC_091057"; transcript_id "TCONS_00233513"; class_code "u"; exon_number "1"; oId "CUFF.139653.1"; tss_id "TSS140525";
+38	Cufflinks	exon	21794568	21794629	.	-	.	gene_id "XLOC_091057"; transcript_id "TCONS_00233513"; class_code "u"; exon_number "2"; oId "CUFF.139653.1"; tss_id "TSS140525";
+38	Cufflinks	exon	12097749	12120113	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232918"; class_code "u"; exon_number "1"; oId "CUFF.139445.18"; tss_id "TSS140249";
+38	Cufflinks	exon	12121888	12122173	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232918"; class_code "u"; exon_number "2"; oId "CUFF.139445.18"; tss_id "TSS140249";
+38	Cufflinks	exon	22349895	22351433	.	-	.	gene_id "XLOC_091083"; transcript_id "TCONS_00233600"; class_code "u"; exon_number "1"; oId "CUFF.139706.2"; tss_id "TSS140581";
+38	Cufflinks	exon	22353389	22353464	.	-	.	gene_id "XLOC_091083"; transcript_id "TCONS_00233600"; class_code "u"; exon_number "2"; oId "CUFF.139706.2"; tss_id "TSS140581";
+38	Cufflinks	exon	17776393	17776462	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "1"; oId "CUFF.139126.6"; tss_id "TSS139789";
+38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "2"; oId "CUFF.139126.6"; tss_id "TSS139789";
+38	Cufflinks	exon	17781481	17782059	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "3"; oId "CUFF.139126.6"; tss_id "TSS139789";
+38	Cufflinks	exon	17782418	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "4"; oId "CUFF.139126.6"; tss_id "TSS139789";
+38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "5"; oId "CUFF.139126.6"; tss_id "TSS139789";
+38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "6"; oId "CUFF.139126.6"; tss_id "TSS139789";
+38	Cufflinks	exon	17798695	17798844	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "7"; oId "CUFF.139126.6"; tss_id "TSS139789";
+38	Cufflinks	exon	17807870	17808287	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232058"; class_code "u"; exon_number "8"; oId "CUFF.139126.6"; tss_id "TSS139789";
+38	Cufflinks	exon	742766	743534	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231447"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.12"; tss_id "TSS139492";
 38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231447"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.12"; tss_id "TSS139492";
-38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
-38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
-38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
-38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231451"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.8"; tss_id "TSS139492";
-38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
-38	Cufflinks	exon	743748	743891	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
-38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
-38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
-38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
-38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
-38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
 38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231447"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.12"; tss_id "TSS139492";
-38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
-38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
-38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
-38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231451"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.8"; tss_id "TSS139492";
-38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
-38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
-38	Cufflinks	exon	744306	745569	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
-38	Cufflinks	exon	744306	746943	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231453"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.13"; tss_id "TSS139492";
-38	Cufflinks	exon	744578	745140	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
-38	Cufflinks	exon	744578	745569	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
-38	Cufflinks	exon	744578	745569	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
-38	Cufflinks	exon	744578	746943	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
-38	Cufflinks	exon	744578	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
 38	Cufflinks	exon	744578	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231447"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.12"; tss_id "TSS139492";
-38	Cufflinks	exon	744578	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231451"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.8"; tss_id "TSS139492";
-38	Cufflinks	exon	744578	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
-38	Cufflinks	exon	744581	746943	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
-38	Cufflinks	exon	744581	746943	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
-38	Cufflinks	exon	744581	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
-38	Cufflinks	exon	744581	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
-38	Cufflinks	exon	745385	746943	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
-38	Cufflinks	exon	746561	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
-38	Cufflinks	exon	746561	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
-38	Cufflinks	exon	746561	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
-38	Cufflinks	exon	7469977	7470325	.	+	.	gene_id "XLOC_090665"; transcript_id "TCONS_00231758"; class_code "u"; exon_number "5"; oId "CUFF.138465.2"; tss_id "TSS139635";
-38	Cufflinks	exon	750003	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
-38	Cufflinks	exon	750023	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
-38	Cufflinks	exon	750023	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
-38	Cufflinks	exon	750023	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
-38	Cufflinks	exon	750023	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231453"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.13"; tss_id "TSS139492";
-38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
-38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
-38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
-38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
-38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
-38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
-38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
-38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
-38	Cufflinks	exon	750260	751381	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
 38	Cufflinks	exon	750260	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231447"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.12"; tss_id "TSS139492";
-38	Cufflinks	exon	750260	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
-38	Cufflinks	exon	750260	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
-38	Cufflinks	exon	750260	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231451"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.8"; tss_id "TSS139492";
-38	Cufflinks	exon	750260	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231453"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.13"; tss_id "TSS139492";
-38	Cufflinks	exon	750936	751381	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
-38	Cufflinks	exon	750936	751381	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
-38	Cufflinks	exon	750936	751381	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
-38	Cufflinks	exon	750936	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
-38	Cufflinks	exon	750936	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
-38	Cufflinks	exon	750936	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
-38	Cufflinks	exon	750936	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231442"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.2"; tss_id "TSS139491";
-38	Cufflinks	exon	750936	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231450"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.7"; tss_id "TSS139492";
-38	Cufflinks	exon	751770	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
-38	Cufflinks	exon	751770	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
-38	Cufflinks	exon	751770	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
-38	Cufflinks	exon	751770	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
-38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231441"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.1"; tss_id "TSS139490";
-38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
-38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231444"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.4"; tss_id "TSS139491";
-38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231445"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.10"; tss_id "TSS139492";
-38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231446"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.11"; tss_id "TSS139492";
 38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231447"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.12"; tss_id "TSS139492";
-38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231448"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.5"; tss_id "TSS139492";
-38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231449"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.6"; tss_id "TSS139492";
-38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231452"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.9"; tss_id "TSS139492";
-38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231454"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.14"; tss_id "TSS139492";
-38	Cufflinks	exon	7699086	7699762	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232871"; class_code "u"; exon_number "1"; oId "CUFF.138454.1"; tss_id "TSS140224";
-38	Cufflinks	exon	7700583	7702635	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232872"; class_code "u"; exon_number "1"; oId "CUFF.138454.2"; tss_id "TSS140224";
-38	Cufflinks	exon	7750752	7750882	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232871"; class_code "u"; exon_number "2"; oId "CUFF.138454.1"; tss_id "TSS140224";
-38	Cufflinks	exon	7750752	7750882	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232872"; class_code "u"; exon_number "2"; oId "CUFF.138454.2"; tss_id "TSS140224";
-38	Cufflinks	exon	7751653	7751717	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232871"; class_code "u"; exon_number "3"; oId "CUFF.138454.1"; tss_id "TSS140224";
-38	Cufflinks	exon	7751653	7751717	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232872"; class_code "u"; exon_number "3"; oId "CUFF.138454.2"; tss_id "TSS140224";
-38	Cufflinks	exon	7751690	7751717	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232876"; class_code "u"; exon_number "1"; oId "CUFF.138454.3"; tss_id "TSS140226";
-38	Cufflinks	exon	7752073	7752248	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232871"; class_code "u"; exon_number "4"; oId "CUFF.138454.1"; tss_id "TSS140224";
-38	Cufflinks	exon	7752073	7752248	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232872"; class_code "u"; exon_number "4"; oId "CUFF.138454.2"; tss_id "TSS140224";
-38	Cufflinks	exon	7755613	7756228	.	-	.	gene_id "XLOC_090939"; transcript_id "TCONS_00232876"; class_code "u"; exon_number "2"; oId "CUFF.138454.3"; tss_id "TSS140226";
-38	Cufflinks	exon	8177029	8178688	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232878"; class_code "u"; exon_number "1"; oId "CUFF.139147.4"; tss_id "TSS140230";
-38	Cufflinks	exon	8177029	8178688	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232879"; class_code "u"; exon_number "1"; oId "CUFF.139147.3"; tss_id "TSS140231";
-38	Cufflinks	exon	8177029	8178688	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232880"; class_code "u"; exon_number "1"; oId "CUFF.139147.1"; tss_id "TSS140231";
-38	Cufflinks	exon	8177029	8178688	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232881"; class_code "u"; exon_number "1"; oId "CUFF.139147.2"; tss_id "TSS140232";
-38	Cufflinks	exon	8179884	8179942	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232879"; class_code "u"; exon_number "2"; oId "CUFF.139147.3"; tss_id "TSS140231";
-38	Cufflinks	exon	8179884	8179977	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232878"; class_code "u"; exon_number "2"; oId "CUFF.139147.4"; tss_id "TSS140230";
-38	Cufflinks	exon	8179884	8179977	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232880"; class_code "u"; exon_number "2"; oId "CUFF.139147.1"; tss_id "TSS140231";
-38	Cufflinks	exon	8179884	8179977	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232881"; class_code "u"; exon_number "2"; oId "CUFF.139147.2"; tss_id "TSS140232";
-38	Cufflinks	exon	8180212	8180266	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232878"; class_code "u"; exon_number "3"; oId "CUFF.139147.4"; tss_id "TSS140230";
-38	Cufflinks	exon	8180418	8180589	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232881"; class_code "u"; exon_number "3"; oId "CUFF.139147.2"; tss_id "TSS140232";
-38	Cufflinks	exon	8180418	8180797	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232879"; class_code "u"; exon_number "3"; oId "CUFF.139147.3"; tss_id "TSS140231";
-38	Cufflinks	exon	8180418	8180893	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232880"; class_code "u"; exon_number "3"; oId "CUFF.139147.1"; tss_id "TSS140231";
-38	Cufflinks	exon	8183107	8183146	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232881"; class_code "u"; exon_number "4"; oId "CUFF.139147.2"; tss_id "TSS140232";
-38	Cufflinks	exon	916839	916982	.	+	.	gene_id "XLOC_090608"; transcript_id "TCONS_00231457"; class_code "u"; exon_number "1"; oId "CUFF.138206.1"; tss_id "TSS139495";
-38	Cufflinks	exon	921030	921143	.	+	.	gene_id "XLOC_090608"; transcript_id "TCONS_00231457"; class_code "u"; exon_number "2"; oId "CUFF.138206.1"; tss_id "TSS139495";
-38	Cufflinks	exon	931061	931154	.	+	.	gene_id "XLOC_090608"; transcript_id "TCONS_00231457"; class_code "u"; exon_number "3"; oId "CUFF.138206.1"; tss_id "TSS139495";
 38	Cufflinks	exon	9471671	9471911	.	+	.	gene_id "XLOC_090669"; transcript_id "TCONS_00231769"; class_code "u"; exon_number "1"; oId "CUFF.138683.1"; tss_id "TSS139645";
-38	Cufflinks	exon	9471671	9471911	.	+	.	gene_id "XLOC_090669"; transcript_id "TCONS_00231770"; class_code "u"; exon_number "1"; oId "CUFF.138683.2"; tss_id "TSS139645";
 38	Cufflinks	exon	9478700	9478780	.	+	.	gene_id "XLOC_090669"; transcript_id "TCONS_00231769"; class_code "u"; exon_number "2"; oId "CUFF.138683.1"; tss_id "TSS139645";
 38	Cufflinks	exon	9485243	9485502	.	+	.	gene_id "XLOC_090669"; transcript_id "TCONS_00231769"; class_code "u"; exon_number "3"; oId "CUFF.138683.1"; tss_id "TSS139645";
-38	Cufflinks	exon	9485243	9485502	.	+	.	gene_id "XLOC_090669"; transcript_id "TCONS_00231770"; class_code "u"; exon_number "2"; oId "CUFF.138683.2"; tss_id "TSS139645";
-38	Cufflinks	exon	9506786	9507412	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232885"; class_code "u"; exon_number "1"; oId "CUFF.138979.1"; tss_id "TSS140236";
-38	Cufflinks	exon	9549709	9549764	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232885"; class_code "u"; exon_number "2"; oId "CUFF.138979.1"; tss_id "TSS140236";
-38	Cufflinks	exon	9575653	9575724	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232886"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000029859"; nearest_ref "ENSCAFT00000048330"; oId "CUFF.138979.2"; tss_id "TSS140237";
-38	Cufflinks	exon	9604520	9604668	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232885"; class_code "u"; exon_number "3"; oId "CUFF.138979.1"; tss_id "TSS140236";
-38	Cufflinks	exon	9604520	9604668	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232886"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000029859"; nearest_ref "ENSCAFT00000048330"; oId "CUFF.138979.2"; tss_id "TSS140237";
-38	Cufflinks	exon	9642250	9642323	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232885"; class_code "u"; exon_number "4"; oId "CUFF.138979.1"; tss_id "TSS140236";
+38	Cufflinks	exon	14620552	14621960	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232973"; class_code "u"; exon_number "1"; oId "CUFF.138906.3"; tss_id "TSS140295";
+38	Cufflinks	exon	14622096	14624208	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232973"; class_code "u"; exon_number "2"; oId "CUFF.138906.3"; tss_id "TSS140295";
+38	Cufflinks	exon	14625580	14625774	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232973"; class_code "u"; exon_number "3"; oId "CUFF.138906.3"; tss_id "TSS140295";
+38	Cufflinks	exon	14658326	14658545	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232973"; class_code "u"; exon_number "4"; oId "CUFF.138906.3"; tss_id "TSS140295";
+38	Cufflinks	exon	14664976	14665265	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232973"; class_code "u"; exon_number "5"; oId "CUFF.138906.3"; tss_id "TSS140295";
+38	Cufflinks	exon	741269	741350	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
+38	Cufflinks	exon	743748	743878	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
+38	Cufflinks	exon	744306	744440	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
+38	Cufflinks	exon	744578	750123	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
+38	Cufflinks	exon	750260	750430	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
+38	Cufflinks	exon	750936	751381	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
+38	Cufflinks	exon	751770	752034	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
+38	Cufflinks	exon	752660	753761	.	+	.	gene_id "XLOC_090606"; transcript_id "TCONS_00231443"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000009623"; nearest_ref "ENSCAFT00000015286"; oId "CUFF.137642.3"; tss_id "TSS139491";
+38	Cufflinks	exon	5689614	5690509	.	-	.	gene_id "XLOC_090924"; transcript_id "TCONS_00232808"; class_code "u"; exon_number "1"; oId "CUFF.138239.1"; tss_id "TSS140192";
+38	Cufflinks	exon	5691615	5692243	.	-	.	gene_id "XLOC_090924"; transcript_id "TCONS_00232808"; class_code "u"; exon_number "2"; oId "CUFF.138239.1"; tss_id "TSS140192";
+38	Cufflinks	exon	1185983	1186688	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "1"; oId "CUFF.137647.22"; tss_id "TSS140087";
+38	Cufflinks	exon	1186818	1186972	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "2"; oId "CUFF.137647.22"; tss_id "TSS140087";
+38	Cufflinks	exon	1187119	1187262	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "3"; oId "CUFF.137647.22"; tss_id "TSS140087";
+38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "4"; oId "CUFF.137647.22"; tss_id "TSS140087";
+38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "5"; oId "CUFF.137647.22"; tss_id "TSS140087";
+38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232601"; class_code "u"; exon_number "6"; oId "CUFF.137647.22"; tss_id "TSS140087";
+38	Cufflinks	exon	17769751	17769862	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
+38	Cufflinks	exon	17781104	17781223	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
+38	Cufflinks	exon	17781481	17782059	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
+38	Cufflinks	exon	17782418	17782813	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
+38	Cufflinks	exon	17787852	17787897	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
+38	Cufflinks	exon	17792956	17793103	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
+38	Cufflinks	exon	17798695	17798844	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
+38	Cufflinks	exon	17807870	17808287	.	+	.	gene_id "XLOC_090743"; transcript_id "TCONS_00232053"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000013346"; nearest_ref "ENSCAFT00000021186"; oId "CUFF.139126.1"; tss_id "TSS139788";
+38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231411"; class_code "u"; exon_number "1"; oId "CUFF.138034.7"; tss_id "TSS139475";
+38	Cufflinks	exon	516357	516387	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231411"; class_code "u"; exon_number "2"; oId "CUFF.138034.7"; tss_id "TSS139475";
+38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231411"; class_code "u"; exon_number "3"; oId "CUFF.138034.7"; tss_id "TSS139475";
+38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231411"; class_code "u"; exon_number "4"; oId "CUFF.138034.7"; tss_id "TSS139475";
+38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231411"; class_code "u"; exon_number "5"; oId "CUFF.138034.7"; tss_id "TSS139475";
+38	Cufflinks	exon	13646626	13648701	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "1"; oId "CUFF.138873.1"; tss_id "TSS140278";
+38	Cufflinks	exon	13649335	13649446	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "2"; oId "CUFF.138873.1"; tss_id "TSS140278";
+38	Cufflinks	exon	13649803	13649981	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "3"; oId "CUFF.138873.1"; tss_id "TSS140278";
+38	Cufflinks	exon	13651540	13651679	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "4"; oId "CUFF.138873.1"; tss_id "TSS140278";
+38	Cufflinks	exon	13656338	13656532	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "5"; oId "CUFF.138873.1"; tss_id "TSS140278";
+38	Cufflinks	exon	13671671	13671846	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "6"; oId "CUFF.138873.1"; tss_id "TSS140278";
+38	Cufflinks	exon	13682934	13682984	.	-	.	gene_id "XLOC_090964"; transcript_id "TCONS_00232953"; class_code "u"; exon_number "7"; oId "CUFF.138873.1"; tss_id "TSS140278";
+38	Cufflinks	exon	21561059	21561334	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232222"; class_code "u"; exon_number "1"; oId "CUFF.139571.2"; tss_id "TSS139887";
+38	Cufflinks	exon	21563543	21565291	.	+	.	gene_id "XLOC_090785"; transcript_id "TCONS_00232222"; class_code "u"; exon_number "2"; oId "CUFF.139571.2"; tss_id "TSS139887";
+38	Cufflinks	exon	515156	515948	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231403"; class_code "u"; exon_number "1"; oId "CUFF.138034.11"; tss_id "TSS139475";
+38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231403"; class_code "u"; exon_number "2"; oId "CUFF.138034.11"; tss_id "TSS139475";
+38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231403"; class_code "u"; exon_number "3"; oId "CUFF.138034.11"; tss_id "TSS139475";
+38	Cufflinks	exon	521313	527048	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231403"; class_code "u"; exon_number "4"; oId "CUFF.138034.11"; tss_id "TSS139475";
+38	Cufflinks	exon	529646	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231403"; class_code "u"; exon_number "5"; oId "CUFF.138034.11"; tss_id "TSS139475";
+38	Cufflinks	exon	2129919	2130201	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231595"; class_code "u"; exon_number "1"; oId "CUFF.137733.3"; tss_id "TSS139554";
+38	Cufflinks	exon	2130311	2130418	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231595"; class_code "u"; exon_number "2"; oId "CUFF.137733.3"; tss_id "TSS139554";
+38	Cufflinks	exon	2131165	2131281	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231595"; class_code "u"; exon_number "3"; oId "CUFF.137733.3"; tss_id "TSS139554";
+38	Cufflinks	exon	2132429	2132594	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231595"; class_code "u"; exon_number "4"; oId "CUFF.137733.3"; tss_id "TSS139554";
+38	Cufflinks	exon	2133317	2133508	.	+	.	gene_id "XLOC_090634"; transcript_id "TCONS_00231595"; class_code "u"; exon_number "5"; oId "CUFF.137733.3"; tss_id "TSS139554";
+38	Cufflinks	exon	8177029	8178688	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232881"; class_code "u"; exon_number "1"; oId "CUFF.139147.2"; tss_id "TSS140232";
+38	Cufflinks	exon	8179884	8179977	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232881"; class_code "u"; exon_number "2"; oId "CUFF.139147.2"; tss_id "TSS140232";
+38	Cufflinks	exon	8180418	8180589	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232881"; class_code "u"; exon_number "3"; oId "CUFF.139147.2"; tss_id "TSS140232";
+38	Cufflinks	exon	8183107	8183146	.	-	.	gene_id "XLOC_090943"; transcript_id "TCONS_00232881"; class_code "u"; exon_number "4"; oId "CUFF.139147.2"; tss_id "TSS140232";
 38	Cufflinks	exon	9794105	9794136	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232887"; class_code "o"; exon_number "1"; gene_name "ENSCAFG00000029859"; nearest_ref "ENSCAFT00000048330"; oId "CUFF.138979.3"; tss_id "TSS140237";
-38	Cufflinks	exon	9880332	9880397	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232886"; class_code "o"; exon_number "3"; gene_name "ENSCAFG00000029859"; nearest_ref "ENSCAFT00000048330"; oId "CUFF.138979.2"; tss_id "TSS140237";
 38	Cufflinks	exon	9880332	9880397	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232887"; class_code "o"; exon_number "2"; gene_name "ENSCAFG00000029859"; nearest_ref "ENSCAFT00000048330"; oId "CUFF.138979.3"; tss_id "TSS140237";
-38	Cufflinks	exon	9945834	9946205	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232886"; class_code "o"; exon_number "4"; gene_name "ENSCAFG00000029859"; nearest_ref "ENSCAFT00000048330"; oId "CUFF.138979.2"; tss_id "TSS140237";
 38	Cufflinks	exon	9945834	9946205	.	-	.	gene_id "XLOC_090947"; transcript_id "TCONS_00232887"; class_code "o"; exon_number "3"; gene_name "ENSCAFG00000029859"; nearest_ref "ENSCAFT00000048330"; oId "CUFF.138979.3"; tss_id "TSS140237";
+38	Cufflinks	exon	10413938	10414557	.	+	.	gene_id "XLOC_090671"; transcript_id "TCONS_00231773"; class_code "u"; exon_number "1"; oId "CUFF.138718.2"; tss_id "TSS139648";
+38	Cufflinks	exon	10443102	10444725	.	+	.	gene_id "XLOC_090671"; transcript_id "TCONS_00231773"; class_code "u"; exon_number "2"; oId "CUFF.138718.2"; tss_id "TSS139648";
+38	Cufflinks	exon	1185983	1186691	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "1"; oId "CUFF.137647.15"; tss_id "TSS140087";
+38	Cufflinks	exon	1187119	1187262	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "2"; oId "CUFF.137647.15"; tss_id "TSS140087";
+38	Cufflinks	exon	1187755	1187874	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "3"; oId "CUFF.137647.15"; tss_id "TSS140087";
+38	Cufflinks	exon	1214547	1214745	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "4"; oId "CUFF.137647.15"; tss_id "TSS140087";
+38	Cufflinks	exon	1216931	1217126	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "5"; oId "CUFF.137647.15"; tss_id "TSS140087";
+38	Cufflinks	exon	1217209	1217412	.	-	.	gene_id "XLOC_090878"; transcript_id "TCONS_00232596"; class_code "u"; exon_number "6"; oId "CUFF.137647.15"; tss_id "TSS140087";
+38	Cufflinks	exon	17816319	17818896	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232063"; class_code "u"; exon_number "1"; oId "CUFF.139119.4"; tss_id "TSS139792";
+38	Cufflinks	exon	17823682	17823764	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232063"; class_code "u"; exon_number "2"; oId "CUFF.139119.4"; tss_id "TSS139792";
+38	Cufflinks	exon	17824159	17824254	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232063"; class_code "u"; exon_number "3"; oId "CUFF.139119.4"; tss_id "TSS139792";
+38	Cufflinks	exon	17831186	17831875	.	+	.	gene_id "XLOC_090744"; transcript_id "TCONS_00232063"; class_code "u"; exon_number "4"; oId "CUFF.139119.4"; tss_id "TSS139792";
+38	Cufflinks	exon	3538813	3539705	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231712"; class_code "u"; exon_number "1"; oId "CUFF.137777.2"; tss_id "TSS139608";
+38	Cufflinks	exon	3540310	3540409	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231712"; class_code "u"; exon_number "2"; oId "CUFF.137777.2"; tss_id "TSS139608";
+38	Cufflinks	exon	3540663	3540903	.	+	.	gene_id "XLOC_090651"; transcript_id "TCONS_00231712"; class_code "u"; exon_number "3"; oId "CUFF.137777.2"; tss_id "TSS139608";
+38	Cufflinks	exon	12097749	12120113	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232919"; class_code "u"; exon_number "1"; oId "CUFF.139445.17"; tss_id "TSS140250";
+38	Cufflinks	exon	12124030	12124067	.	-	.	gene_id "XLOC_090953"; transcript_id "TCONS_00232919"; class_code "u"; exon_number "2"; oId "CUFF.139445.17"; tss_id "TSS140250";
+38	Cufflinks	exon	13777990	13779860	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "1"; oId "CUFF.138970.3"; tss_id "TSS140280";
+38	Cufflinks	exon	13781608	13781739	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "2"; oId "CUFF.138970.3"; tss_id "TSS140280";
+38	Cufflinks	exon	13843886	13844017	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "3"; oId "CUFF.138970.3"; tss_id "TSS140280";
+38	Cufflinks	exon	14050396	14050465	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "4"; oId "CUFF.138970.3"; tss_id "TSS140280";
+38	Cufflinks	exon	14077181	14077299	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "5"; oId "CUFF.138970.3"; tss_id "TSS140280";
+38	Cufflinks	exon	14098539	14098634	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "6"; oId "CUFF.138970.3"; tss_id "TSS140280";
+38	Cufflinks	exon	14100364	14100524	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232957"; class_code "u"; exon_number "7"; oId "CUFF.138970.3"; tss_id "TSS140280";
+38	Cufflinks	exon	14620552	14624208	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232974"; class_code "u"; exon_number "1"; oId "CUFF.138906.4"; tss_id "TSS140295";
+38	Cufflinks	exon	14625580	14625754	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232974"; class_code "u"; exon_number "2"; oId "CUFF.138906.4"; tss_id "TSS140295";
+38	Cufflinks	exon	14658326	14658545	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232974"; class_code "u"; exon_number "3"; oId "CUFF.138906.4"; tss_id "TSS140295";
+38	Cufflinks	exon	14664976	14665265	.	-	.	gene_id "XLOC_090974"; transcript_id "TCONS_00232974"; class_code "u"; exon_number "4"; oId "CUFF.138906.4"; tss_id "TSS140295";
+38	Cufflinks	exon	13946994	13947036	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232959"; class_code "u"; exon_number "1"; oId "CUFF.138970.4"; tss_id "TSS140281";
+38	Cufflinks	exon	14050108	14050155	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232959"; class_code "u"; exon_number "2"; oId "CUFF.138970.4"; tss_id "TSS140281";
+38	Cufflinks	exon	14050396	14050465	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232959"; class_code "u"; exon_number "3"; oId "CUFF.138970.4"; tss_id "TSS140281";
+38	Cufflinks	exon	14077181	14077299	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232959"; class_code "u"; exon_number "4"; oId "CUFF.138970.4"; tss_id "TSS140281";
+38	Cufflinks	exon	14078950	14079177	.	-	.	gene_id "XLOC_090966"; transcript_id "TCONS_00232959"; class_code "u"; exon_number "5"; oId "CUFF.138970.4"; tss_id "TSS140281";
+38	Cufflinks	exon	516103	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231416"; class_code "u"; exon_number "1"; oId "CUFF.138034.16"; tss_id "TSS139476";
+38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231416"; class_code "u"; exon_number "2"; oId "CUFF.138034.16"; tss_id "TSS139476";
+38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231416"; class_code "u"; exon_number "3"; oId "CUFF.138034.16"; tss_id "TSS139476";
+38	Cufflinks	exon	23500593	23505172	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232435"; class_code "u"; exon_number "1"; oId "CUFF.139777.3"; tss_id "TSS140006";
+38	Cufflinks	exon	23505320	23506701	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232435"; class_code "u"; exon_number "2"; oId "CUFF.139777.3"; tss_id "TSS140006";
+38	Cufflinks	exon	23506760	23513427	.	+	.	gene_id "XLOC_090849"; transcript_id "TCONS_00232435"; class_code "u"; exon_number "3"; oId "CUFF.139777.3"; tss_id "TSS140006";
--- a/test-data/candidate_lncRNA.gtf.mRNA-sort.gtf	Wed Apr 25 15:55:19 2018 -0400
+++ b/test-data/candidate_lncRNA.gtf.mRNA-sort.gtf	Wed Dec 18 15:24:23 2019 -0500
@@ -1,273 +1,282 @@
-38	Cufflinks	exon	10265190	10265289	.	-	.	gene_id "XLOC_090949"; transcript_id "TCONS_00232891"; class_code "u"; exon_number "1"; oId "CUFF.138676.1"; tss_id "TSS140240";
-38	Cufflinks	exon	10321384	10321633	.	-	.	gene_id "XLOC_090949"; transcript_id "TCONS_00232891"; class_code "u"; exon_number "2"; oId "CUFF.138676.1"; tss_id "TSS140240";
-38	Cufflinks	exon	22958458	22958676	.	+	.	gene_id "XLOC_090833"; transcript_id "TCONS_00232410"; class_code "="; exon_number "1"; gene_name "ENSCAFG00000011692"; nearest_ref "ENSCAFT00000018544"; oId "ENSCAFT00000018544"; tss_id "TSS139987";
-38	Cufflinks	exon	22958758	22959390	.	+	.	gene_id "XLOC_090833"; transcript_id "TCONS_00232410"; class_code "="; exon_number "2"; gene_name "ENSCAFG00000011692"; nearest_ref "ENSCAFT00000018544"; oId "ENSCAFT00000018544"; tss_id "TSS139987";
-38	Cufflinks	exon	23052109	23052291	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "1"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23052117	23052291	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "1"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23053697	23053936	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "2"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23053697	23053936	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "2"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23054964	23055089	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "3"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23054964	23055089	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "3"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23057007	23057147	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "4"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23057007	23057147	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "4"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23057822	23057968	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "5"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23057822	23057968	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "5"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23060147	23060280	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "6"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23060147	23060280	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "6"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23060810	23060954	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "7"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23060810	23060954	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "7"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23062593	23062747	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "8"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23062593	23062747	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "8"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23063695	23063830	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "9"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23063695	23063830	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "9"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23063947	23064048	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "10"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23063947	23064048	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "10"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23065660	23065770	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "11"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23065660	23065797	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "11"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23066409	23066519	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "12"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23066409	23066519	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "12"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23068095	23068172	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "13"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23068095	23068172	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "13"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23068317	23068472	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "14"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23068317	23068472	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "14"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23070171	23070375	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "15"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23070171	23070375	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "15"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23071976	23072157	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "16"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23071976	23072157	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "16"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23073466	23073709	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "17"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23073466	23073709	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "17"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23074961	23075083	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "18"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23074961	23075083	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "18"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23078572	23078789	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "19"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23078572	23078789	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "19"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23079608	23079700	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "20"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23079608	23079700	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "20"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23081620	23081744	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "21"; oId "CUFF.139754.2"; tss_id "TSS139994";
-38	Cufflinks	exon	23081620	23081757	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "21"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23082736	23082887	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "22"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23082747	23082887	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232419"; class_code "u"; exon_number "1"; oId "CUFF.139754.3"; tss_id "TSS139995";
-38	Cufflinks	exon	23083435	23083621	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "23"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23083435	23083621	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232419"; class_code "u"; exon_number "2"; oId "CUFF.139754.3"; tss_id "TSS139995";
-38	Cufflinks	exon	23085405	23085506	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "24"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23085405	23086700	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232419"; class_code "u"; exon_number "3"; oId "CUFF.139754.3"; tss_id "TSS139995";
-38	Cufflinks	exon	23087065	23087156	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "25"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23087786	23087930	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "26"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23088644	23088825	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "27"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	23092071	23092150	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "28"; oId "CUFF.139754.1"; tss_id "TSS139994";
-38	Cufflinks	exon	2369398	2369512	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
-38	Cufflinks	exon	2369409	2369512	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
 38	Cufflinks	exon	2369409	2369512	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
-38	Cufflinks	exon	2384266	2384403	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
-38	Cufflinks	exon	2388465	2388681	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231616"; class_code "u"; exon_number "1"; oId "CUFF.137762.5"; tss_id "TSS139565";
-38	Cufflinks	exon	2388639	2388681	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "1"; oId "CUFF.137762.6"; tss_id "TSS139566";
-38	Cufflinks	exon	2388663	2388681	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "1"; oId "CUFF.137762.7"; tss_id "TSS139566";
-38	Cufflinks	exon	2390742	2391095	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "2"; oId "CUFF.137762.7"; tss_id "TSS139566";
 38	Cufflinks	exon	2401440	2401487	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
 38	Cufflinks	exon	2402080	2402202	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
-38	Cufflinks	exon	2402080	2402202	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "2"; oId "CUFF.137762.6"; tss_id "TSS139566";
-38	Cufflinks	exon	2402789	2403049	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
-38	Cufflinks	exon	2402789	2403049	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
 38	Cufflinks	exon	2402789	2403049	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
+38	Cufflinks	exon	2404955	2405003	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
+38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
+38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
+38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
+38	Cufflinks	exon	2388465	2388681	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231616"; class_code "u"; exon_number "1"; oId "CUFF.137762.5"; tss_id "TSS139565";
 38	Cufflinks	exon	2402789	2403049	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231616"; class_code "u"; exon_number "2"; oId "CUFF.137762.5"; tss_id "TSS139565";
-38	Cufflinks	exon	2402789	2403049	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "3"; oId "CUFF.137762.6"; tss_id "TSS139566";
-38	Cufflinks	exon	2402789	2403049	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "3"; oId "CUFF.137762.7"; tss_id "TSS139566";
-38	Cufflinks	exon	2404955	2405003	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
-38	Cufflinks	exon	2404955	2405003	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
-38	Cufflinks	exon	2404955	2405003	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
 38	Cufflinks	exon	2404955	2405003	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231616"; class_code "u"; exon_number "3"; oId "CUFF.137762.5"; tss_id "TSS139565";
-38	Cufflinks	exon	2404955	2405003	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "4"; oId "CUFF.137762.6"; tss_id "TSS139566";
-38	Cufflinks	exon	2404955	2405003	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "4"; oId "CUFF.137762.7"; tss_id "TSS139566";
-38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
-38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
-38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
 38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231616"; class_code "u"; exon_number "4"; oId "CUFF.137762.5"; tss_id "TSS139565";
-38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "5"; oId "CUFF.137762.6"; tss_id "TSS139566";
-38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "5"; oId "CUFF.137762.7"; tss_id "TSS139566";
-38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
-38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
-38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
 38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231616"; class_code "u"; exon_number "5"; oId "CUFF.137762.5"; tss_id "TSS139565";
-38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "6"; oId "CUFF.137762.6"; tss_id "TSS139566";
-38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "6"; oId "CUFF.137762.7"; tss_id "TSS139566";
-38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
-38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
-38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231614"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.3"; tss_id "TSS139564";
 38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231616"; class_code "u"; exon_number "6"; oId "CUFF.137762.5"; tss_id "TSS139565";
-38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "7"; oId "CUFF.137762.6"; tss_id "TSS139566";
-38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "7"; oId "CUFF.137762.7"; tss_id "TSS139566";
 38	Cufflinks	exon	3006216	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3006424	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3006575	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
-38	Cufflinks	exon	3006589	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3006589	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3006589	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3006589	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3006589	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
 38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
-38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
 38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
-38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
 38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
-38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
 38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
-38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
 38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3240752	3240860	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	3297502	3297545	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
+38	Cufflinks	exon	23082747	23082887	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232419"; class_code "u"; exon_number "1"; oId "CUFF.139754.3"; tss_id "TSS139995";
+38	Cufflinks	exon	23083435	23083621	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232419"; class_code "u"; exon_number "2"; oId "CUFF.139754.3"; tss_id "TSS139995";
+38	Cufflinks	exon	23085405	23086700	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232419"; class_code "u"; exon_number "3"; oId "CUFF.139754.3"; tss_id "TSS139995";
+38	Cufflinks	exon	2369398	2369512	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
+38	Cufflinks	exon	2402789	2403049	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
+38	Cufflinks	exon	2404955	2405003	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
+38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
+38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
+38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231612"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.1"; tss_id "TSS139564";
+38	Cufflinks	exon	3006589	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3297502	3297545	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	2388639	2388681	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "1"; oId "CUFF.137762.6"; tss_id "TSS139566";
+38	Cufflinks	exon	2402080	2402202	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "2"; oId "CUFF.137762.6"; tss_id "TSS139566";
+38	Cufflinks	exon	2402789	2403049	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "3"; oId "CUFF.137762.6"; tss_id "TSS139566";
+38	Cufflinks	exon	2404955	2405003	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "4"; oId "CUFF.137762.6"; tss_id "TSS139566";
+38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "5"; oId "CUFF.137762.6"; tss_id "TSS139566";
+38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "6"; oId "CUFF.137762.6"; tss_id "TSS139566";
+38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231617"; class_code "u"; exon_number "7"; oId "CUFF.137762.6"; tss_id "TSS139566";
+38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231412"; class_code "u"; exon_number "1"; oId "CUFF.138034.8"; tss_id "TSS139475";
+38	Cufflinks	exon	516357	516383	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231412"; class_code "u"; exon_number "2"; oId "CUFF.138034.8"; tss_id "TSS139475";
+38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231412"; class_code "u"; exon_number "3"; oId "CUFF.138034.8"; tss_id "TSS139475";
+38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231412"; class_code "u"; exon_number "4"; oId "CUFF.138034.8"; tss_id "TSS139475";
+38	Cufflinks	exon	521313	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231412"; class_code "u"; exon_number "5"; oId "CUFF.138034.8"; tss_id "TSS139475";
+38	Cufflinks	exon	3006589	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
+38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
+38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
+38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
+38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
 38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
 38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
 38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
 38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
 38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
 38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
 38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3210994	3211022	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "1"; oId "CUFF.138100.11"; tss_id "TSS139598";
-38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
 38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "2"; oId "CUFF.138100.11"; tss_id "TSS139598";
-38	Cufflinks	exon	3240752	3240860	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3240752	3240860	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3240752	3240860	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
 38	Cufflinks	exon	3240752	3240860	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3240752	3240860	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3240752	3240860	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "3"; oId "CUFF.138100.11"; tss_id "TSS139598";
-38	Cufflinks	exon	3250596	3250672	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
 38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "4"; oId "CUFF.138100.11"; tss_id "TSS139598";
-38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
 38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "5"; oId "CUFF.138100.11"; tss_id "TSS139598";
-38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
-38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
-38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "6"; oId "CUFF.138100.11"; tss_id "TSS139598";
 38	Cufflinks	exon	3278237	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
 38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
+38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
+38	Cufflinks	exon	3288769	3289040	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
+38	Cufflinks	exon	22958458	22958676	.	+	.	gene_id "XLOC_090833"; transcript_id "TCONS_00232410"; class_code "="; exon_number "1"; gene_name "ENSCAFG00000011692"; nearest_ref "ENSCAFT00000018544"; oId "ENSCAFT00000018544"; tss_id "TSS139987";
+38	Cufflinks	exon	22958758	22959390	.	+	.	gene_id "XLOC_090833"; transcript_id "TCONS_00232410"; class_code "="; exon_number "2"; gene_name "ENSCAFG00000011692"; nearest_ref "ENSCAFT00000018544"; oId "ENSCAFT00000018544"; tss_id "TSS139987";
+38	Cufflinks	exon	3006589	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
 38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "7"; oId "CUFF.138100.11"; tss_id "TSS139598";
-38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
-38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
 38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "8"; oId "CUFF.138100.11"; tss_id "TSS139598";
-38	Cufflinks	exon	3288769	3289040	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
-38	Cufflinks	exon	3288769	3289040	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231686"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.7"; tss_id "TSS139597";
-38	Cufflinks	exon	3288769	3289040	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "9"; oId "CUFF.138100.11"; tss_id "TSS139598";
 38	Cufflinks	exon	3293962	3294089	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
-38	Cufflinks	exon	3294018	3294089	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3294018	3294089	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3294018	3294089	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "21"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3297502	3297545	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231682"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.1"; tss_id "TSS139595";
-38	Cufflinks	exon	3297502	3297545	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "21"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
-38	Cufflinks	exon	3297502	3297545	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
-38	Cufflinks	exon	3297502	3297545	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "22"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
-38	Cufflinks	exon	3297502	3297545	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231689"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.8"; tss_id "TSS139597";
 38	Cufflinks	exon	3297502	3297545	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231690"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.9"; tss_id "TSS139597";
+38	Cufflinks	exon	515156	515966	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231409"; class_code "u"; exon_number "1"; oId "CUFF.138034.5"; tss_id "TSS139475";
+38	Cufflinks	exon	516357	516383	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231409"; class_code "u"; exon_number "2"; oId "CUFF.138034.5"; tss_id "TSS139475";
+38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231409"; class_code "u"; exon_number "3"; oId "CUFF.138034.5"; tss_id "TSS139475";
+38	Cufflinks	exon	519376	534442	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231409"; class_code "u"; exon_number "4"; oId "CUFF.138034.5"; tss_id "TSS139475";
 38	Cufflinks	exon	515156	515948	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231414"; class_code "u"; exon_number "1"; oId "CUFF.138034.12"; tss_id "TSS139475";
 38	Cufflinks	exon	518126	518188	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231414"; class_code "u"; exon_number "2"; oId "CUFF.138034.12"; tss_id "TSS139475";
 38	Cufflinks	exon	519376	519454	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231414"; class_code "u"; exon_number "3"; oId "CUFF.138034.12"; tss_id "TSS139475";
 38	Cufflinks	exon	521313	523494	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231414"; class_code "u"; exon_number "4"; oId "CUFF.138034.12"; tss_id "TSS139475";
 38	Cufflinks	exon	613419	613475	.	+	.	gene_id "XLOC_090599"; transcript_id "TCONS_00231414"; class_code "u"; exon_number "5"; oId "CUFF.138034.12"; tss_id "TSS139475";
+38	Cufflinks	exon	23052109	23052291	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "1"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23053697	23053936	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "2"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23054964	23055089	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "3"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23057007	23057147	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "4"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23057822	23057968	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "5"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23060147	23060280	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "6"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23060810	23060954	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "7"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23062593	23062747	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "8"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23063695	23063830	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "9"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23063947	23064048	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "10"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23065660	23065797	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "11"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23066409	23066519	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "12"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23068095	23068172	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "13"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23068317	23068472	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "14"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23070171	23070375	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "15"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23071976	23072157	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "16"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23073466	23073709	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "17"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23074961	23075083	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "18"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23078572	23078789	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "19"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23079608	23079700	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "20"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23081620	23081757	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "21"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23082736	23082887	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "22"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23083435	23083621	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "23"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23085405	23085506	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "24"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23087065	23087156	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "25"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23087786	23087930	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "26"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23088644	23088825	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "27"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	23092071	23092150	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232417"; class_code "u"; exon_number "28"; oId "CUFF.139754.1"; tss_id "TSS139994";
+38	Cufflinks	exon	3006589	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3294018	3294089	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3297502	3297545	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231687"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.10"; tss_id "TSS139597";
+38	Cufflinks	exon	3006575	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3240752	3240860	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3288769	3289040	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231684"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.3"; tss_id "TSS139597";
+38	Cufflinks	exon	3210994	3211022	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "1"; oId "CUFF.138100.11"; tss_id "TSS139598";
+38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "2"; oId "CUFF.138100.11"; tss_id "TSS139598";
+38	Cufflinks	exon	3240752	3240860	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "3"; oId "CUFF.138100.11"; tss_id "TSS139598";
+38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "4"; oId "CUFF.138100.11"; tss_id "TSS139598";
+38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "5"; oId "CUFF.138100.11"; tss_id "TSS139598";
+38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "6"; oId "CUFF.138100.11"; tss_id "TSS139598";
+38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "7"; oId "CUFF.138100.11"; tss_id "TSS139598";
+38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "8"; oId "CUFF.138100.11"; tss_id "TSS139598";
+38	Cufflinks	exon	3288769	3289040	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231692"; class_code "u"; exon_number "9"; oId "CUFF.138100.11"; tss_id "TSS139598";
+38	Cufflinks	exon	2369409	2369512	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
+38	Cufflinks	exon	2384266	2384403	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
+38	Cufflinks	exon	2402789	2403049	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
+38	Cufflinks	exon	2404955	2405003	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
+38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
+38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
+38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231613"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000010206"; nearest_ref "ENSCAFT00000016203"; oId "CUFF.137762.2"; tss_id "TSS139564";
+38	Cufflinks	exon	10265190	10265289	.	-	.	gene_id "XLOC_090949"; transcript_id "TCONS_00232891"; class_code "u"; exon_number "1"; oId "CUFF.138676.1"; tss_id "TSS140240";
+38	Cufflinks	exon	10321384	10321633	.	-	.	gene_id "XLOC_090949"; transcript_id "TCONS_00232891"; class_code "u"; exon_number "2"; oId "CUFF.138676.1"; tss_id "TSS140240";
+38	Cufflinks	exon	2388663	2388681	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "1"; oId "CUFF.137762.7"; tss_id "TSS139566";
+38	Cufflinks	exon	2390742	2391095	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "2"; oId "CUFF.137762.7"; tss_id "TSS139566";
+38	Cufflinks	exon	2402789	2403049	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "3"; oId "CUFF.137762.7"; tss_id "TSS139566";
+38	Cufflinks	exon	2404955	2405003	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "4"; oId "CUFF.137762.7"; tss_id "TSS139566";
+38	Cufflinks	exon	2405293	2405399	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "5"; oId "CUFF.137762.7"; tss_id "TSS139566";
+38	Cufflinks	exon	2405837	2405889	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "6"; oId "CUFF.137762.7"; tss_id "TSS139566";
+38	Cufflinks	exon	2406160	2407590	.	+	.	gene_id "XLOC_090641"; transcript_id "TCONS_00231618"; class_code "u"; exon_number "7"; oId "CUFF.137762.7"; tss_id "TSS139566";
+38	Cufflinks	exon	23052117	23052291	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "1"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23053697	23053936	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "2"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23054964	23055089	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "3"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23057007	23057147	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "4"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23057822	23057968	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "5"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23060147	23060280	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "6"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23060810	23060954	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "7"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23062593	23062747	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "8"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23063695	23063830	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "9"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23063947	23064048	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "10"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23065660	23065770	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "11"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23066409	23066519	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "12"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23068095	23068172	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "13"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23068317	23068472	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "14"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23070171	23070375	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "15"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23071976	23072157	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "16"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23073466	23073709	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "17"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23074961	23075083	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "18"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23078572	23078789	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "19"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23079608	23079700	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "20"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	23081620	23081744	.	+	.	gene_id "XLOC_090839"; transcript_id "TCONS_00232418"; class_code "u"; exon_number "21"; oId "CUFF.139754.2"; tss_id "TSS139994";
+38	Cufflinks	exon	3006424	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3240752	3240860	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3294018	3294089	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3297502	3297545	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231683"; class_code "x"; exon_number "21"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.2"; tss_id "TSS139596";
+38	Cufflinks	exon	3006589	3006830	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "1"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3110519	3110598	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "2"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3112746	3112845	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "3"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3129469	3129517	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "4"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3132447	3132506	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "5"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3141720	3141794	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "6"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3143280	3143363	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "7"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3146798	3146892	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "8"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3184225	3184405	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "9"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3185549	3185713	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "10"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3187458	3187594	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "11"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3192060	3192123	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "12"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3215198	3215306	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "13"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3240752	3240860	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "14"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3250596	3250672	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "15"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3268093	3268242	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "16"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3270069	3270298	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "17"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3278165	3278378	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "18"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3281094	3281199	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "19"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3285071	3285243	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "20"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3294018	3294089	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "21"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";
+38	Cufflinks	exon	3297502	3297545	.	+	.	gene_id "XLOC_090646"; transcript_id "TCONS_00231688"; class_code "x"; exon_number "22"; gene_name "ENSCAFG00000027924"; nearest_ref "ENSCAFT00000042207"; oId "CUFF.138100.5"; tss_id "TSS139597";