Mercurial > repos > iuc > find_nested_alt_orfs

comparison test-data/find_naltorfs_log.txt @ 0:14f4c7a8a962 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/naltorfs/ commit cbedf7b5968b45a08df88d4ad799951d6f50a2bd"
author iuc
date Mon, 11 Apr 2022 20:37:19 +0000
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-1:000000000000 0:14f4c7a8a962
1 {'chr6_GL000250v2_alt': 4672374}
2 Excluding 77 unique canonical coding sequences from 77 BED lines.
3 cds length is not divisible by 3!!!: 634. chr6_GL000250v2_alt 938190 938841 ENST00000432222.1 0 - 938207 938841 12,12,120 1 651 0
4 cds length is not divisible by 3!!!: 271. chr6_GL000250v2_alt 2057211 2060006 ENST00000420604.1 0 - 2057618 2060006 12,12,120 3 437,165,76 0,2313,2719
5 cds length is not divisible by 3!!!: 986. chr6_GL000250v2_alt 2862767 2871733 ENST00000448800.5 0 - 2862982 2871733 12,12,120 9 232,148,145,110,132,119,184,93,38 0,560,834,1077,2561,5148,6281,8544,8928
6 cds length is not divisible by 3!!!: 580. chr6_GL000250v2_alt 3655068 3704125 ENST00000425722.1 0 - 3655068 3703952 12,12,120 19 21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,186 0,637,1109,8114,9561,12963,13438,14141,16499,17121,26913,32289,32814,43342,43448,45110,45965,47083,48871
7 transcripts: 77 unique LNO ORFs: 4