Mercurial > repos > iuc > find_nested_alt_orfs

diff test-data/find_naltorfs_log.txt @ 0:14f4c7a8a962 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/naltorfs/ commit cbedf7b5968b45a08df88d4ad799951d6f50a2bd"
author iuc
date Mon, 11 Apr 2022 20:37:19 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/find_naltorfs_log.txt	Mon Apr 11 20:37:19 2022 +0000
@@ -0,0 +1,7 @@
+{'chr6_GL000250v2_alt': 4672374}
+Excluding 77 unique canonical coding sequences from 77 BED lines.
+cds length is not divisible by 3!!!: 634. chr6_GL000250v2_alt	938190	938841	ENST00000432222.1	0	-	938207	938841	12,12,120	1	651	0
+cds length is not divisible by 3!!!: 271. chr6_GL000250v2_alt	2057211	2060006	ENST00000420604.1	0	-	2057618	2060006	12,12,120	3	437,165,76	0,2313,2719
+cds length is not divisible by 3!!!: 986. chr6_GL000250v2_alt	2862767	2871733	ENST00000448800.5	0	-	2862982	2871733	12,12,120	9	232,148,145,110,132,119,184,93,38	0,560,834,1077,2561,5148,6281,8544,8928
+cds length is not divisible by 3!!!: 580. chr6_GL000250v2_alt	3655068	3704125	ENST00000425722.1	0	-	3655068	3703952	12,12,120	19	21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,186	0,637,1109,8114,9561,12963,13438,14141,16499,17121,26913,32289,32814,43342,43448,45110,45965,47083,48871
+transcripts: 77	unique LNO ORFs: 4