Mercurial > repos > iuc > flair

comparison test-data/UCSC_Main_on_Human_knownGene_region_chrM.gtf @ 0:5d17cf201540 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/flair commit b80808c3c53775c3f323581efb44d124d6e8bd1a"
author iuc
date Fri, 27 Nov 2020 18:45:47 +0000
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:5d17cf201540
1 chrM hg38_knownGene exon 577 647 0.000000 + . gene_id "ENST00000387314.1"; transcript_id "ENST00000387314.1";
2 chrM hg38_knownGene exon 648 1601 0.000000 + . gene_id "ENST00000389680.2"; transcript_id "ENST00000389680.2";
3 chrM hg38_knownGene exon 1602 1670 0.000000 + . gene_id "ENST00000387342.1"; transcript_id "ENST00000387342.1";
4 chrM hg38_knownGene exon 1671 3229 0.000000 + . gene_id "ENST00000387347.2"; transcript_id "ENST00000387347.2";
5 chrM hg38_knownGene exon 3230 3304 0.000000 + . gene_id "ENST00000386347.1"; transcript_id "ENST00000386347.1";
6 chrM hg38_knownGene start_codon 3307 3309 0.000000 + . gene_id "ENST00000361390.2"; transcript_id "ENST00000361390.2";
7 chrM hg38_knownGene CDS 3307 4259 0.000000 + 0 gene_id "ENST00000361390.2"; transcript_id "ENST00000361390.2";
8 chrM hg38_knownGene stop_codon 4260 4262 0.000000 + . gene_id "ENST00000361390.2"; transcript_id "ENST00000361390.2";
9 chrM hg38_knownGene exon 3307 4262 0.000000 + . gene_id "ENST00000361390.2"; transcript_id "ENST00000361390.2";
10 chrM hg38_knownGene exon 4263 4331 0.000000 + . gene_id "ENST00000387365.1"; transcript_id "ENST00000387365.1";
11 chrM hg38_knownGene exon 4329 4400 0.000000 - . gene_id "ENST00000387372.1"; transcript_id "ENST00000387372.1";
12 chrM hg38_knownGene exon 4402 4469 0.000000 + . gene_id "ENST00000387377.1"; transcript_id "ENST00000387377.1";
13 chrM hg38_knownGene start_codon 4470 4472 0.000000 + . gene_id "ENST00000361453.3"; transcript_id "ENST00000361453.3";
14 chrM hg38_knownGene CDS 4470 5508 0.000000 + 0 gene_id "ENST00000361453.3"; transcript_id "ENST00000361453.3";
15 chrM hg38_knownGene stop_codon 5509 5511 0.000000 + . gene_id "ENST00000361453.3"; transcript_id "ENST00000361453.3";
16 chrM hg38_knownGene exon 4470 5511 0.000000 + . gene_id "ENST00000361453.3"; transcript_id "ENST00000361453.3";
17 chrM hg38_knownGene exon 5512 5579 0.000000 + . gene_id "ENST00000387382.1"; transcript_id "ENST00000387382.1";
18 chrM hg38_knownGene exon 5587 5655 0.000000 - . gene_id "ENST00000387392.1"; transcript_id "ENST00000387392.1";
19 chrM hg38_knownGene exon 5657 5729 0.000000 - . gene_id "ENST00000387400.1"; transcript_id "ENST00000387400.1";
20 chrM hg38_knownGene exon 5761 5826 0.000000 - . gene_id "ENST00000387405.1"; transcript_id "ENST00000387405.1";
21 chrM hg38_knownGene exon 5826 5891 0.000000 - . gene_id "ENST00000387409.1"; transcript_id "ENST00000387409.1";
22 chrM hg38_knownGene start_codon 5904 5906 0.000000 + . gene_id "ENST00000361624.2"; transcript_id "ENST00000361624.2";
23 chrM hg38_knownGene CDS 5904 7442 0.000000 + 0 gene_id "ENST00000361624.2"; transcript_id "ENST00000361624.2";
24 chrM hg38_knownGene stop_codon 7443 7445 0.000000 + . gene_id "ENST00000361624.2"; transcript_id "ENST00000361624.2";
25 chrM hg38_knownGene exon 5904 7445 0.000000 + . gene_id "ENST00000361624.2"; transcript_id "ENST00000361624.2";
26 chrM hg38_knownGene exon 7446 7514 0.000000 - . gene_id "ENST00000387416.2"; transcript_id "ENST00000387416.2";
27 chrM hg38_knownGene exon 7518 7585 0.000000 + . gene_id "ENST00000387419.1"; transcript_id "ENST00000387419.1";
28 chrM hg38_knownGene start_codon 7586 7588 0.000000 + . gene_id "ENST00000361739.1"; transcript_id "ENST00000361739.1";
29 chrM hg38_knownGene CDS 7586 8266 0.000000 + 0 gene_id "ENST00000361739.1"; transcript_id "ENST00000361739.1";
30 chrM hg38_knownGene stop_codon 8267 8269 0.000000 + . gene_id "ENST00000361739.1"; transcript_id "ENST00000361739.1";
31 chrM hg38_knownGene exon 7586 8269 0.000000 + . gene_id "ENST00000361739.1"; transcript_id "ENST00000361739.1";
32 chrM hg38_knownGene exon 8295 8364 0.000000 + . gene_id "ENST00000387421.1"; transcript_id "ENST00000387421.1";
33 chrM hg38_knownGene start_codon 8366 8368 0.000000 + . gene_id "ENST00000361851.1"; transcript_id "ENST00000361851.1";
34 chrM hg38_knownGene CDS 8366 8569 0.000000 + 0 gene_id "ENST00000361851.1"; transcript_id "ENST00000361851.1";
35 chrM hg38_knownGene stop_codon 8570 8572 0.000000 + . gene_id "ENST00000361851.1"; transcript_id "ENST00000361851.1";
36 chrM hg38_knownGene exon 8366 8572 0.000000 + . gene_id "ENST00000361851.1"; transcript_id "ENST00000361851.1";
37 chrM hg38_knownGene start_codon 8527 8529 0.000000 + . gene_id "ENST00000361899.2"; transcript_id "ENST00000361899.2";
38 chrM hg38_knownGene CDS 8527 9204 0.000000 + 0 gene_id "ENST00000361899.2"; transcript_id "ENST00000361899.2";
39 chrM hg38_knownGene stop_codon 9205 9207 0.000000 + . gene_id "ENST00000361899.2"; transcript_id "ENST00000361899.2";
40 chrM hg38_knownGene exon 8527 9207 0.000000 + . gene_id "ENST00000361899.2"; transcript_id "ENST00000361899.2";
41 chrM hg38_knownGene start_codon 9207 9209 0.000000 + . gene_id "ENST00000362079.2"; transcript_id "ENST00000362079.2";
42 chrM hg38_knownGene CDS 9207 9987 0.000000 + 0 gene_id "ENST00000362079.2"; transcript_id "ENST00000362079.2";
43 chrM hg38_knownGene stop_codon 9988 9990 0.000000 + . gene_id "ENST00000362079.2"; transcript_id "ENST00000362079.2";
44 chrM hg38_knownGene exon 9207 9990 0.000000 + . gene_id "ENST00000362079.2"; transcript_id "ENST00000362079.2";
45 chrM hg38_knownGene exon 9991 10058 0.000000 + . gene_id "ENST00000387429.1"; transcript_id "ENST00000387429.1";
46 chrM hg38_knownGene start_codon 10059 10061 0.000000 + . gene_id "ENST00000361227.2"; transcript_id "ENST00000361227.2";
47 chrM hg38_knownGene CDS 10059 10401 0.000000 + 0 gene_id "ENST00000361227.2"; transcript_id "ENST00000361227.2";
48 chrM hg38_knownGene stop_codon 10402 10404 0.000000 + . gene_id "ENST00000361227.2"; transcript_id "ENST00000361227.2";
49 chrM hg38_knownGene exon 10059 10404 0.000000 + . gene_id "ENST00000361227.2"; transcript_id "ENST00000361227.2";
50 chrM hg38_knownGene exon 10405 10469 0.000000 + . gene_id "ENST00000387439.1"; transcript_id "ENST00000387439.1";
51 chrM hg38_knownGene start_codon 10470 10472 0.000000 + . gene_id "ENST00000361335.1"; transcript_id "ENST00000361335.1";
52 chrM hg38_knownGene CDS 10470 10763 0.000000 + 0 gene_id "ENST00000361335.1"; transcript_id "ENST00000361335.1";
53 chrM hg38_knownGene stop_codon 10764 10766 0.000000 + . gene_id "ENST00000361335.1"; transcript_id "ENST00000361335.1";
54 chrM hg38_knownGene exon 10470 10766 0.000000 + . gene_id "ENST00000361335.1"; transcript_id "ENST00000361335.1";
55 chrM hg38_knownGene start_codon 10760 10762 0.000000 + . gene_id "ENST00000361381.2"; transcript_id "ENST00000361381.2";
56 chrM hg38_knownGene CDS 10760 12134 0.000000 + 0 gene_id "ENST00000361381.2"; transcript_id "ENST00000361381.2";
57 chrM hg38_knownGene stop_codon 12135 12137 0.000000 + . gene_id "ENST00000361381.2"; transcript_id "ENST00000361381.2";
58 chrM hg38_knownGene exon 10760 12137 0.000000 + . gene_id "ENST00000361381.2"; transcript_id "ENST00000361381.2";
59 chrM hg38_knownGene exon 12138 12206 0.000000 + . gene_id "ENST00000387441.1"; transcript_id "ENST00000387441.1";
60 chrM hg38_knownGene exon 12207 12265 0.000000 + . gene_id "ENST00000387449.1"; transcript_id "ENST00000387449.1";
61 chrM hg38_knownGene exon 12266 12336 0.000000 + . gene_id "ENST00000387456.1"; transcript_id "ENST00000387456.1";
62 chrM hg38_knownGene start_codon 12337 12339 0.000000 + . gene_id "ENST00000361567.2"; transcript_id "ENST00000361567.2";
63 chrM hg38_knownGene CDS 12337 14145 0.000000 + 0 gene_id "ENST00000361567.2"; transcript_id "ENST00000361567.2";
64 chrM hg38_knownGene stop_codon 14146 14148 0.000000 + . gene_id "ENST00000361567.2"; transcript_id "ENST00000361567.2";
65 chrM hg38_knownGene exon 12337 14148 0.000000 + . gene_id "ENST00000361567.2"; transcript_id "ENST00000361567.2";
66 chrM hg38_knownGene stop_codon 14149 14151 0.000000 - . gene_id "ENST00000361681.2"; transcript_id "ENST00000361681.2";
67 chrM hg38_knownGene CDS 14152 14673 0.000000 - 0 gene_id "ENST00000361681.2"; transcript_id "ENST00000361681.2";
68 chrM hg38_knownGene start_codon 14671 14673 0.000000 - . gene_id "ENST00000361681.2"; transcript_id "ENST00000361681.2";
69 chrM hg38_knownGene exon 14149 14673 0.000000 - . gene_id "ENST00000361681.2"; transcript_id "ENST00000361681.2";
70 chrM hg38_knownGene exon 14674 14742 0.000000 - . gene_id "ENST00000387459.1"; transcript_id "ENST00000387459.1";
71 chrM hg38_knownGene start_codon 14747 14749 0.000000 + . gene_id "ENST00000361789.2"; transcript_id "ENST00000361789.2";
72 chrM hg38_knownGene CDS 14747 15884 0.000000 + 0 gene_id "ENST00000361789.2"; transcript_id "ENST00000361789.2";
73 chrM hg38_knownGene stop_codon 15885 15887 0.000000 + . gene_id "ENST00000361789.2"; transcript_id "ENST00000361789.2";
74 chrM hg38_knownGene exon 14747 15887 0.000000 + . gene_id "ENST00000361789.2"; transcript_id "ENST00000361789.2";
75 chrM hg38_knownGene exon 15888 15953 0.000000 + . gene_id "ENST00000387460.2"; transcript_id "ENST00000387460.2";
76 chrM hg38_knownGene exon 15956 16023 0.000000 - . gene_id "ENST00000387461.2"; transcript_id "ENST00000387461.2";