Mercurial > repos > iuc > gemini_query

diff gemini_query.xml @ 4:7ca6716748c2 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit 283362494058ed64143b1f27afb447b8a1cb4313
author iuc
date Fri, 14 Dec 2018 12:51:59 -0500
parents 666f60a9331a
children cd00221d67cb
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line diff
--- a/gemini_query.xml	Wed Oct 17 13:30:51 2018 -0400
+++ b/gemini_query.xml	Fri Dec 14 12:51:59 2018 -0500
@@ -1,4 +1,4 @@
-<tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.0">
+<tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.1">
     <description>Querying the GEMINI database</description>
     <macros>
         <import>gemini_macros.xml</import>
@@ -92,9 +92,14 @@
     </outputs>
     <tests>
         <test>
-            <param name="infile" value="gemini_load_result.db" ftype="gemini.sqlite" />
-            <param name="q" value="select start from variants limit 10" />
-            <output name="outfile" file="gemini_query_result.tabular" />
+            <param name="infile" value="gemini_load_result1.db" ftype="gemini.sqlite" />
+            <param name="q" value="select chrom,start from variants limit 10" />
+            <param name="header" value="True" />
+            <output name="outfile">
+                <assert_contents>
+                    <has_line_matching expression="chrom&#009;start" />
+                </assert_contents>
+            </output>
         </test>
     </tests>
     <help>